Search details
1.
Pervasive Regulatory Functions of mRNA Structure Revealed by High-Resolution SHAPE Probing.
Cell
; 173(1): 181-195.e18, 2018 03 22.
Article
in English
| MEDLINE | ID: mdl-29551268
2.
Discovery of a large-scale, cell-state-responsive allosteric switch in the 7SK RNA using DANCE-MaP.
Mol Cell
; 82(9): 1708-1723.e10, 2022 05 05.
Article
in English
| MEDLINE | ID: mdl-35320755
3.
Hierarchy of RNA functional dynamics.
Annu Rev Biochem
; 83: 441-66, 2014.
Article
in English
| MEDLINE | ID: mdl-24606137
4.
Mutation signature filtering enables high-fidelity RNA structure probing at all four nucleobases with DMS.
Nucleic Acids Res
; 51(16): 8744-8757, 2023 09 08.
Article
in English
| MEDLINE | ID: mdl-37334863
5.
Single-Molecule Correlated Chemical Probing: A Revolution in RNA Structure Analysis.
Acc Chem Res
; 56(7): 763-775, 2023 04 04.
Article
in English
| MEDLINE | ID: mdl-36917683
6.
Global 5'-UTR RNA structure regulates translation of a SERPINA1 mRNA.
Nucleic Acids Res
; 50(17): 9689-9704, 2022 09 23.
Article
in English
| MEDLINE | ID: mdl-36107773
7.
Natural Selection Shapes Codon Usage in the Human Genome.
Am J Hum Genet
; 107(1): 83-95, 2020 07 02.
Article
in English
| MEDLINE | ID: mdl-32516569
8.
RNA base-pairing complexity in living cells visualized by correlated chemical probing.
Proc Natl Acad Sci U S A
; 116(49): 24574-24582, 2019 12 03.
Article
in English
| MEDLINE | ID: mdl-31744869
9.
Direct Duplex Detection: An Emerging Tool in the RNA Structure Analysis Toolbox.
Trends Biochem Sci
; 41(9): 734-736, 2016 09.
Article
in English
| MEDLINE | ID: mdl-27427309
10.
Natural Selection Shapes Codon Usage in the Human Genome.
Am J Hum Genet
; 109(8): 1559, 2022 Aug 04.
Article
in English
| MEDLINE | ID: mdl-35931054
11.
An RNA structure-mediated, posttranscriptional model of human α-1-antitrypsin expression.
Proc Natl Acad Sci U S A
; 114(47): E10244-E10253, 2017 11 21.
Article
in English
| MEDLINE | ID: mdl-29109288
12.
Direct identification of base-paired RNA nucleotides by correlated chemical probing.
RNA
; 23(1): 6-13, 2017 01.
Article
in English
| MEDLINE | ID: mdl-27803152
13.
Correction to "Single-Molecule Correlated Chemical Probing: A Revolution in RNA Structure Analysis".
Acc Chem Res
; 56(12): 1684, 2023 Jun 20.
Article
in English
| MEDLINE | ID: mdl-37283502
14.
Tuning RNA folding and function through rational design of junction topology.
Nucleic Acids Res
; 45(16): 9706-9715, 2017 09 19.
Article
in English
| MEDLINE | ID: mdl-28934478
15.
Functional complexity and regulation through RNA dynamics.
Nature
; 482(7385): 322-30, 2012 Feb 15.
Article
in English
| MEDLINE | ID: mdl-22337051
16.
Secondary structure encodes a cooperative tertiary folding funnel in the Azoarcus ribozyme.
Nucleic Acids Res
; 44(1): 402-12, 2016 Jan 08.
Article
in English
| MEDLINE | ID: mdl-26481360
17.
Efficient in silico exploration of RNA interhelical conformations using Euler angles and WExplore.
Nucleic Acids Res
; 42(19): 12126-37, 2014 Oct 29.
Article
in English
| MEDLINE | ID: mdl-25294827
18.
Topological constraints are major determinants of tRNA tertiary structure and dynamics and provide basis for tertiary folding cooperativity.
Nucleic Acids Res
; 42(18): 11792-804, 2014 Oct.
Article
in English
| MEDLINE | ID: mdl-25217593
19.
Noncanonical secondary structure stabilizes mitochondrial tRNA(Ser(UCN)) by reducing the entropic cost of tertiary folding.
J Am Chem Soc
; 137(10): 3592-9, 2015 Mar 18.
Article
in English
| MEDLINE | ID: mdl-25705930
20.
Single transcriptional and translational preQ1 riboswitches adopt similar pre-folded ensembles that follow distinct folding pathways into the same ligand-bound structure.
Nucleic Acids Res
; 41(22): 10462-75, 2013 Dec.
Article
in English
| MEDLINE | ID: mdl-24003028