Search details
1.
Multiplatform analysis of 12 cancer types reveals molecular classification within and across tissues of origin.
Cell
; 158(4): 929-944, 2014 Aug 14.
Article
in English
| MEDLINE | ID: mdl-25109877
2.
The performance of homopolymer detection using dichromatic and tetrachromatic fluorogenic next-generation sequencing platforms.
BMC Genomics
; 25(1): 542, 2024 May 31.
Article
in English
| MEDLINE | ID: mdl-38822237
3.
Characterization and mitigation of artifacts derived from NGS library preparation due to structure-specific sequences in the human genome.
BMC Genomics
; 25(1): 227, 2024 Mar 01.
Article
in English
| MEDLINE | ID: mdl-38429743
4.
OncoPubMiner: a platform for mining oncology publications.
Brief Bioinform
; 23(5)2022 09 20.
Article
in English
| MEDLINE | ID: mdl-36058206
5.
RabbitQCPlus 2.0: More efficient and versatile quality control for sequencing data.
Methods
; 216: 39-50, 2023 08.
Article
in English
| MEDLINE | ID: mdl-37330158
6.
A comprehensive performance evaluation, comparison, and integration of computational methods for detecting and estimating cross-contamination of human samples in cancer next-generation sequencing analysis.
J Biomed Inform
; 152: 104625, 2024 04.
Article
in English
| MEDLINE | ID: mdl-38479675
7.
Comprehensive fundamental somatic variant calling and quality management strategies for human cancer genomes.
Brief Bioinform
; 22(3)2021 05 20.
Article
in English
| MEDLINE | ID: mdl-32510555
8.
MSIsensor-ct: microsatellite instability detection using cfDNA sequencing data.
Brief Bioinform
; 22(5)2021 09 02.
Article
in English
| MEDLINE | ID: mdl-33461213
9.
Comprehensive review and evaluation of computational methods for identifying FLT3-internal tandem duplication in acute myeloid leukaemia.
Brief Bioinform
; 22(5)2021 09 02.
Article
in English
| MEDLINE | ID: mdl-33851200
10.
Identification of MKI67, TPR , and TCHH Mutations as Prognostic Biomarkers for Patients With Defective Mismatch Repair Colon Cancer Stage II/III.
Dis Colon Rectum
; 66(11): 1481-1491, 2023 11 01.
Article
in English
| MEDLINE | ID: mdl-37643197
11.
RabbitQC: high-speed scalable quality control for sequencing data.
Bioinformatics
; 37(4): 573-574, 2021 05 01.
Article
in English
| MEDLINE | ID: mdl-32790850
12.
HotSpot3D web server: an integrated resource for mutation analysis in protein 3D structures.
Bioinformatics
; 36(12): 3944-3946, 2020 06 01.
Article
in English
| MEDLINE | ID: mdl-32315389
13.
GenomeVIP: a cloud platform for genomic variant discovery and interpretation.
Genome Res
; 27(8): 1450-1459, 2017 08.
Article
in English
| MEDLINE | ID: mdl-28522612
14.
Mutational landscape and significance across 12 major cancer types.
Nature
; 502(7471): 333-339, 2013 Oct 17.
Article
in English
| MEDLINE | ID: mdl-24132290
15.
MetaSpark: a spark-based distributed processing tool to recruit metagenomic reads to reference genomes.
Bioinformatics
; 33(7): 1090-1092, 2017 04 01.
Article
in English
| MEDLINE | ID: mdl-28065898
16.
MSIsensor: microsatellite instability detection using paired tumor-normal sequence data.
Bioinformatics
; 30(7): 1015-6, 2014 Apr 01.
Article
in English
| MEDLINE | ID: mdl-24371154
17.
Ultrafast clustering algorithms for metagenomic sequence analysis.
Brief Bioinform
; 13(6): 656-68, 2012 Nov.
Article
in English
| MEDLINE | ID: mdl-22772836
18.
MGAviewer: a desktop visualization tool for analysis of metagenomics alignment data.
Bioinformatics
; 29(1): 122-3, 2013 Jan 01.
Article
in English
| MEDLINE | ID: mdl-23044549
19.
Revealing prognostic insights of programmed cell death (PCD)-associated genes in advanced non-small cell lung cancer.
Aging (Albany NY)
; 16(9): 8110-8141, 2024 May 08.
Article
in English
| MEDLINE | ID: mdl-38728242
20.
CD-HIT: accelerated for clustering the next-generation sequencing data.
Bioinformatics
; 28(23): 3150-2, 2012 Dec 01.
Article
in English
| MEDLINE | ID: mdl-23060610