How Does Sphagnum Growing Affect Testate Amoeba Communities and Corresponding Protozoic Si Pools? Results from Field Analyses in SW China.

The policy and practice of ecological restoration and conservation in China obtained some remarkable results. For example, Sphagnum moss growing on abandoned farmland, which was peatland before agricultural use, has rapidly expanded the wetland area in SW China. Microorganisms such as testate amoebae are sensitive to environmental change and thus have been widely used as ecological indicators in various habitats. We analyzed differently aged Sphagnum growing plots on a Sphagnum growing farmland and natural Sphagnum plots in SW China to examine how Sphagnum-dwelling testate amoeba communities and corresponding protozoic silicon (Si) pools respond to ecological restoration practice. We found that abundance, taxon richness, and diversity of testate amoebae were higher in Sphagnum growing farmland plots compared to natural Sphagnum plots. Protozoic Si pools showed an increase with Sphagnum growing time representing increased Si accumulation by idiosomic testate amoeba shells. However, protozoic Si pools were negatively correlated with taxon richness and diversity of testate amoebae. Our results showed that (i) natural Sphagnum plots were not characterized by the expected higher biodiversity of testate amoebae compared to Sphagnum growing plots and (ii) consequently protozoic Si pool quantity in natural Sphagnum plots was less driven by biodiversity of testate amoebae than expected. We concluded our results to underline the value of (i) environmental restoration policy in general and (ii) testate amoeba communities and corresponding protozoic Si pools for Si cycling in restoration areas of peatlands in particular. Based on our results, we recommend a sustainable cultivation of Sphagnum moss and an additional establishment of protected areas, where no Sphagnum harvesting occurs. These protected Sphagnum areas might represent hot spots of undisturbed testate amoeba communities and corresponding protozoic Si pools and thus of microbial Si cycling.

Nebela jiuhuensis nov. sp. (Amoebozoa; Arcellinida; Hyalospheniidae): A New Member of the Nebela saccifera - equicalceus - ansata Group Described from Sphagnum Peatlands in South-Central China.

Hyalospheniids are among the most common and conspicuous testate amoebae in high-latitude peatlands and forest humus. These testate amoebae were widely studied as bioindicators and are increasingly used as models in microbial biogeography. However, data on their diversity and ecology are still very unevenly distributed geographically: notably, data are lacking for low-latitude peatlands. We describe here a new species, Nebela jiuhuensis, from peatlands near the Middle Yangtze River reach of south-central China with characteristic morphology. The test (shell) has hollow horn-like lateral extensions also found in N. saccifera, N. equicalceus (=N. hippocrepis), and N. ansata, three large species restricted mostly to Sphagnum peatlands of Eastern North America. Mitochondrial cytochrome oxidase (COI) data confirm that N. jiuhuensis is closely related to the morphologically very similar North American species N. saccifera and more distantly to N. ansata within the N. penardiana group. These species are all found in wet mosses growing in poor fens. Earlier reports of morphologically similar specimens found in South Korea peatlands suggest that N. jiuhuensis may be distributed in comparable peatlands in Eastern Asia (China and Korea). The discovery of such a conspicuous new species in Chinese peatlands suggests that many new testate amoebae species are yet to be discovered, including potential regional endemics. Furthermore, human activities (e.g., drainage, agriculture, and pollution) have reduced the known habitat of N. jiuhuensis, which can thus be considered as locally endangered. We, therefore, suggest that this very conspicuous micro-organism with a probably limited geographical distribution and specific habitat requirement should be considered as a flagship species for microbial biogeography as well as local environmental conservation and management.

Testate amoebae (Protozoa) in lakes of the Qinghai-Tibet Plateau: Biodiversity, community structures, and protozoic biosilicification in relation to environmental properties and climate warming.

The Qinghai-Tibet Plateau (QTP) is characterized by a vast number of frozen and unfrozen freshwater reservoirs, which is why it is also called "the third pole" of the Earth or "Asian Water Tower". We analyzed testate amoeba (TA) biodiversity and corresponding protozoic biosilicification in lake sediments of the QTP in relation to environmental properties (freshwater conditions, elevation, and climate). As TA are known as excellent bio-indicators, our results allowed us to derive conclusions about the influence of climate warming on TA communities and microbial biogeochemical silicon (Si) cycling. We found a total of 113 TA taxa including some rare and one unknown species in the analyzed lake sediments of the QTP highlighting the potential of this remote region for TA biodiversity. >1/3 of the identified TA taxa were relatively small (<30 µm) reflecting the relatively harsh environmental conditions in the examined lakes. TA communities were strongly affected by physico-chemical properties of the lakes, especially water temperature and pH, but also elevation and climate conditions (temperature, precipitation). Our study reveals climate-related changes in TA biodiversity with consequences for protozoic biosilicification. As the warming trend in the QTP is two to three times faster compared to the global average, our results provide not only deeper insights into the relations between TA biodiversity and environmental properties, but also predictions of future developments in other regions of the world. Moreover, our results provide fundamental data for paleolimnological reconstructions. Thus, examining the QTP is helpful to understand microbial biogeochemical Si cycling in the past, present, and future.

Keystone Taxa and Predictive Functional Analysis of Sphagnum palustre Tank Microbiomes in Erxianyan Peatland, Central China.

Sphagnum is a fundamental ecosystem of engineers, including more than 300 species around the world. These species host diverse microbes, either endosymbiotic or ectosymbiotic, and are key to carbon sequestration in peatland ecosystems. However, the linkages between different types of Sphagnum and the diversity and ecological functions of Sphagnum-associated microbiomes are poorly known, and so are their joint responses to ecological functions. Here, we systematically investigated endophytes in Sphagnum palustre via next-generation sequencing (NGS) techniques in the Erxianyan peatland, central China. The total bacterial microbiome was classified into 38 phyla and 55 classes, 122 orders and 490 genera. The top 8 phyla of Proteobacteria (33.69%), Firmicutes (11.94%), Bacteroidetes (9.42%), Actinobacteria (6.53%), Planctomycetes (6.37%), Gemmatimonadetes (3.05%), Acidobacteria (5.59%) and Cyanobacteria (1.71%) occupied 78.31% of total OTUs. The core microbiome of S. palustre was mainly distributed mainly in 7 phyla, 9 classes, 15 orders, 22 families and 43 known genera. There were many differences in core microbiomes compared to those in the common higher plants. We further demonstrate that the abundant functional groups have a substantial potential for nitrogen fixation, carbon cycle, nitrate metabolism, sulfate respiration and chitinolysis. These results indicate that potential ecological function of Sphagnum palustre in peatlands is partially rooted in its microbiomes, and that incorporating into functional groups of Sphagnum-associated microbiomes can promote mechanistic understanding of Sphagnum ecology in subalpine peatlands.

The elemental enrichments at Dajiuhu Peatland in the Middle Yangtze Valley in response to changes in East Asian monsoon and human activity since 20,000 cal yr BP.

Here we present multiproxy inorganic geochemical records from a peat core (ZK5) from the Dajiuhu Basin in central China to investigate peatland deposition processes and atmospheric metal pollution and to explore their relationships with East Asian monsoon change and human activities in the Middle Yangtze Valley since 20,000 cal yr BP. The peat physicochemical data including total organic carbon (TOC), trace elements, and grain-size show that the site has changed from a lake during the cold-wet Last Glacial Maximum (LGM; 20,000-18,000 cal yr BP), to a marshy wetland during the mild last deglaciation (18,000-11,500 cal yr BP) and a peatland during the mostly warm and dry Holocene (11,500 cal yr BP-present). This general sequence corresponds with changes in East Asian monsoon indicated by stalagmites δ18O records and boreal summer insolation. Marked decreases in trace element concentrations correspond to two periods of peatland expansion during the abrupt hydroclimatic transitions from the LGM to the last deglaciation and from the last deglaciation to the early Holocene. Warm-dry mid-Holocene might induce high organic matter decomposition in peat sediments. Increasing natural element concentrations since the late Holocene are correlated with the weakening of the summer monsoon and elevated atmospheric dust deposition. Increasing Cu and Pb concentrations in peat record indicate large-scale Cu smelting during the Bronze Age and excessive coal burning during the 10th century or so. The anthropogenic heavy metals were transported by prevailing East Asian summer monsoon and deposited in the Dajiuhu Basin during periods of heightened human activities. Our compilation of heavy metals records across China confirmed the noticeable impacts of the historical human activity on deposition environments during the late Holocene. Consequently, trace elements from the Dajiuhu Basin are reliable proxies for capturing monsoon climate-induced peatland deposition response and present important evidence for a historical atmospheric heavy metal pollution in the Middle Yangtze Valley. Our results offer useful references for peatland evolution and protection under the background of global change.

A new testate amoebae species Planhoogenraadia wuchanica sp. nov. from subtropical forest soils in Wuhan, central China.

Here we describe a new testate amoeba species Planhoogenraadia wuchanica sp. nov. identified in subtropical forest soils in Wuhan, central China. The smaller shell length, narrower aperture and distinctive 'cap' structure make P. wuchanica morphologically distinct from similar taxa in the genus. While this new species is morphologically distinctive, phylogenetic analyses would be beneficial to clarify taxonomic relationships within the genus Planhoogenraadia.

Pentagonia zhangduensis nov. spec. (Lobosea, Arcellinida), a new freshwater species from China.

The morphology of a new testate amoeba Pentagonia zhangduensis nov. spec. was investigated using light and scanning electron microscopy. The new species was discovered in the sediments of Lake Zhangdu, Hubei Province, China. The low coefficients of variation and normal size frequency distribution suggest that P. zhangduensis is a size-monomorphic species. P. zhangduensis differs from the one other species in this genus (P. maroccana), by its larger size and its quadrangular cross section with two parallel longitudinal ridges on each of the two flattened sides of the test.

Diversity, distribution and biogeography of testate amoebae in China: implications for ecological studies in Asia.

Testate amoebae are a group of shelled protozoa that occur in high density populations in wet environments. More than 1900 testate amoebae species or subspecies have been reported in published literature over the last 200 years, from many regions of the world. Testate amoebae are classified as Lobosea or Filosea respectively, according to the presence of lobose or filiform pseudopodia. Testate amoebae have proved an interesting group of indicator organisms in palaeoenvironmental studies and have also been used as bioindicators of human impact on ecosystems. Until recently, the testate amoebae of China were unknown to most western scientists, but our knowledge has improved greatly over the past 20 years. This paper summarizes the testate amoebae research in China along with relevant data from other countries in Asia, and provides the necessary context for future research.