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1.
Glob Chang Biol ; 30(1): e17147, 2024 Jan.
Article in English | MEDLINE | ID: mdl-38273514

ABSTRACT

Organo-mineral interactions have been regarded as the primary mechanism for the stabilization of soil organic carbon (SOC) over decadal to millennial timescales, and the capacity for soil carbon (C) storage has commonly been assessed based on soil mineralogical attributes, particularly mineral surface availability. However, it remains contentious whether soil C sequestration is exclusively governed by mineral vacancies, making it challenging to accurately predict SOC dynamics. Here, through a 400-day incubation experiment using 13 C-labeled organic materials in two contrasting soils (i.e., Mollisol and Ultisol), we show that despite the unsaturation of mineral surfaces in both soils, the newly incorporated C predominantly adheres to "dirty" mineral surfaces coated with native organic matter (OM), demonstrating the crucial role of organo-organic interactions in exogenous C sequestration. Such interactions lead to multilayered C accumulation that is not constrained by mineral vacancies, a process distinct from direct organo-mineral contacts. The coverage of native OM by new C, representing the degree of organo-organic interactions, is noticeably larger in Ultisol (~14.2%) than in Mollisol (~5.8%), amounting to the net retention of exogenous C in Ultisol by 0.2-1.3 g kg-1 and in Mollisol by 0.1-1.0 g kg-1 . Additionally, organo-organic interactions are primarily mediated by polysaccharide-rich microbial necromass. Further evidence indicates that iron oxides can selectively preserve polysaccharide compounds, thereby promoting the organo-organic interactions. Overall, our findings provide direct empirical evidence for an overlooked but critically important pathway of C accumulation, challenging the prevailing "C saturation" concept that emphasizes the overriding role of mineral vacancies. It is estimated that, through organo-organic interactions, global Mollisols and Ultisols might sequester ~0.1-1.0 and ~0.3-1.7 Pg C per year, respectively, corresponding to the neutralization of ca. 0.5%-3.0% of soil C emissions or 5%-30% of fossil fuel combustion globally.


Subject(s)
Carbon , Soil , Minerals , Polysaccharides
2.
Environ Sci Technol ; 58(23): 10084-10094, 2024 Jun 11.
Article in English | MEDLINE | ID: mdl-38816987

ABSTRACT

The preservation of soil organic carbon (OC) is an effective way to decelerate the emission of CO2 emission. However, the coregulation of pore structure and mineral composition in OC stabilization remains elusive. We employed the in situ nondestructive oxidation of OC by low-temperature ashing (LTA) combined with near edge X-ray absorption fine structure (NEXAFS), high-resolution microtomography (µ-CT), field emission electron probe microanalysis (FE-EPMA) with C-free embedding, and novel Cosine similarity measurement to investigate the C retention in different aggregate fractions of contrasting soils. Pore structure and minerals contributed equally (ca. 50%) to OC accumulation in macroaggregates, while chemical protection played a leading role in C retention with 53.4%-59.2% of residual C associated with minerals in microaggregates. Phyllosilicates were discovered to be more prominent than Fe (hydr)oxides in C stabilization. The proportion of phyllosilicates-associated C (52.0%-61.9%) was higher than that bound with Fe (hydr)oxides (45.6%-55.3%) in all aggregate fractions tested. This study disentangled quantitatively for the first time a trade-off between physical and chemical protection of OC varying with aggregate size and the different contributions of minerals to OC preservation. Incorporating pore structure and mineral composition into C modeling would optimize the C models and improve the soil C content prediction.


Subject(s)
Carbon , Minerals , Soil , Soil/chemistry , Carbon/analysis , Minerals/chemistry , Carbon Dioxide/analysis , China , Electron Microscope Tomography , Environmental Monitoring
3.
Environ Res ; 251(Pt 2): 118679, 2024 Jun 15.
Article in English | MEDLINE | ID: mdl-38518904

ABSTRACT

Metal-organic frameworks (MOFs) are promising adsorbents for legacy per-/polyfluoroalkyl substances (PFASs), but they are being replaced by emerging PFASs. The effects of varying carbon chains and functional groups of emerging PFASs on their adsorption behavior on MOFs require attention. This study systematically revealed the structure-adsorption relationships and interaction mechanisms of legacy and emerging PFASs on a typical MOF MIL-101(Cr). It also presented an approach reflecting the average electronegativity of PFAS moieties for adsorption prediction. We demonstrated that short-chain or sulfonate PFASs showed higher adsorption capacities (µmol/g) on MIL-101(Cr) than their long-chain or carboxylate counterparts, respectively. Compared with linear PFASs, their branched isomers were found to exhibit a higher adsorption potential on MIL-101(Cr). In addition, the introduction of ether bond into PFAS molecule (e.g., hexafluoropropylene oxide dimeric acid, GenX) increased the adsorption capacity, while the replacement of CF2 moieties in PFAS molecule with CH2 moieties (e.g., 6:2 fluorotelomer sulfonate, 6:2 FTS) caused a decrease in adsorption. Divalent ions (such as Ca2+ and SO42-) and solution pH have a greater effect on the adsorption of PFASs containing ether bonds or more CF2 moieties. PFAS adsorption on MIL-101(Cr) was governed by electrostatic interaction, complexation, hydrogen bonding, π-CF interaction, and π-anion interaction as well as steric effects, which were associated with the molecular electronegativity and chain length of each PFAS. The average electronegativity of individual moieties (named Me) for each PFAS was estimated and found to show a significantly positive correlation with the corresponding adsorption capacity on MIL-101(Cr). The removal rates of major PFASs in contaminated groundwater by MIL-101(Cr) were also correlated with the corresponding Me values. These findings will assist with the adsorption prediction for a wide range of PFASs and contribute to tailoring efficient MOF materials.


Subject(s)
Fluorocarbons , Metal-Organic Frameworks , Adsorption , Fluorocarbons/chemistry , Metal-Organic Frameworks/chemistry , Carbon/chemistry , Water Pollutants, Chemical/chemistry
4.
Environ Sci Technol ; 57(1): 790-800, 2023 01 10.
Article in English | MEDLINE | ID: mdl-36516830

ABSTRACT

Widespread antibiotic resistance genes (ARGs) have emerged as a focus of attention for public health. Transformation is essential for ARGs dissemination in soils and associated environments; however, the mechanisms of how soil components contribute to the transformation of ARGs remain elusive. Here we demonstrate that three representative mineral-humic acid (HA) composites exert contrasting influence on the transformation of plasmid-borne ARGs in Bacillus subtilis. Mineral surface-bound HA facilitated transformation in kaolinite and montmorillonite systems, while an inhibitory effect of HA was observed for goethite. The elevated transformation by HA-coated kaolinite was mainly attributed to the enhanced activity of competence-stimulating factor (CSF), while increased transformation by montmorillonite-HA composites was assigned to the weakened adsorption affinity of DNA and enhanced gene expression induced by flagella-driven cell motility. In goethite system, HA played an overriding role in suppressing transformation via alleviation of cell membrane damage. The results obtained offer insights into the divergent mechanisms of humic substances in modulating bacterial transformation by soil minerals. Our findings would help for a better understanding on the fate of ARGs in soil systems and provide potentials for the utilization of soil components, particularly organic matter, to mitigate the spread of ARGs in a range of settings.


Subject(s)
Humic Substances , Kaolin , Bentonite , Anti-Bacterial Agents , Minerals , Soil , Drug Resistance, Microbial/genetics , Adsorption
5.
Ecotoxicol Environ Saf ; 255: 114744, 2023 Apr 15.
Article in English | MEDLINE | ID: mdl-36931086

ABSTRACT

Heavy metal contamination of soils has been a global environmental issue over the past decades, threatening food security and human health. Understanding the migration and transformation of heavy metals in soils is critical for restoring an impaired environment and developing sustainable agriculture, particularly in the face of global warming. However, little effort has been devoted to investigating the impact of elevated temperatures on the migration and distribution of exogenous heavy metals in soils. This study experimented with a 180-day incubation at 15 °C, 30 °C, and 45 °C with an arable soil (Alfisol) of Huang-Huai-Hai River Basin, China, which was initially spiked with copper (Cu). A comparison of the results revealed that the percentage of soil water-soluble Cu doubled at 45 °C compared with 15 °C. The percentage of protein-like substances in dissolved organic matter (DOM) was the highest at 45 °C, suggesting that proteinaceous components play a more significant role in controlling the dissolution of Cu into DOM. Moreover, by sequential extraction and micro-X-ray fluorescence (µ-XRF), Cu was facilitatively transformed from exchangeable, and specifically adsorbed fractions, to iron (Fe)/manganese (Mn) oxides bound species by 7.75%23.63% with the elevation of temperature from 15 °C to 45 °C. The conversion of Cu speciation is attributed to the significant release of organic carbon from Fe/Mn oxides, especially the Mn oxide components, which are available for Cu binding. The findings of this work will provide an in-depth understanding of the fate of Cu in soils, which is fundamental for the risk assessment and remediation of Cu-polluted soils in the Huang-Huai-Hai River Basin under the context of global warming.


Subject(s)
Metals, Heavy , Soil Pollutants , Humans , Copper/metabolism , Soil/chemistry , Temperature , Metals, Heavy/analysis , Oxides , Soil Pollutants/analysis
6.
Environ Sci Technol ; 56(23): 16707-16715, 2022 12 06.
Article in English | MEDLINE | ID: mdl-36378621

ABSTRACT

Graphene oxide (GO) is a widely used antimicrobial and antibiofouling material in surface modification. Although the antibacterial mechanisms of GO have been thoroughly elucidated, the dynamics of bacterial attachment on GO surfaces under environmentally relevant conditions remain largely unknown. In this study, quartz crystal microbalance with dissipation monitoring (QCM-D) was used to examine the dynamic attachment processes of a model organism Pseudomonas aeruginosa PAO1 onto GO surface under different ionic strengths (1-600 mM NaCl). Our results show the highest bacterial attachment at moderate ionic strengths (200-400 mM). The quantitative model of QCM-D reveals that the enhanced bacterial attachment is attributed to the higher contact area between bacterial cells and GO surface. The extended Derjaguin-Landau-Verwey-Overbeek (XDLVO) theory and atomic force microscopy (AFM) analysis were employed to reveal the mechanisms of the bacteria-GO interactions under different ionic strengths. The strong electrostatic and steric repulsion at low ionic strengths (1-100 mM) was found to hinder the bacteria-GO interaction, while the limited polymer bridging caused by the collapse of biopolymer layers reduced cell attachment at a high ionic strength (600 mM). These findings advance our understanding of the ionic strength-dependent bacteria-GO interaction and provide implications to further improve the antibiofouling performance of GO-modified surfaces.


Subject(s)
Graphite , Pseudomonas aeruginosa , Graphite/chemistry , Osmolar Concentration , Quartz Crystal Microbalance Techniques , Surface Properties
7.
Environ Sci Technol ; 53(14): 8147-8156, 2019 Jul 16.
Article in English | MEDLINE | ID: mdl-31246014

ABSTRACT

Submicron-sized iron oxide particles can influence the activity of bacteria, but the exact mechanisms of oxide toxicity toward bacteria remain elusive. By using atomic force microscopy (AFM), soft X-ray tomography (Nano-CT), and Fourier transform infrared (FTIR) spectrometry, we show how the size-dependent interfacial interactions between hematite particles and bacteria in the absence of any ligands contribute to the antimicrobial properties against Gram-positive and Gram-negative bacterial strains. We found that surface adhesion between hematite particles and bacterial cells is initially dominated by Lifshitz van der Waals and electrostatic forces. Subsequently, the rapid formation of P-O-Fe bonds occurs, followed by changes in the structures of membrane proteins in 2 h, resulting in the loss of the structural integrity of the membrane within 10 h. Thus, particles can migrate into the cells. After contact with bacterial cells, reactive oxygen species are generated on the surface of hematite particles, leading to cell permeabilization. G- bacteria appear to be more susceptible to this process than G+ bacteria because the latter exhibit weaker adhesion forces toward hematite and benefit from the protective effects of the peptidoglycan layers. Our work revealed that hematite nanoparticles are more toxic to bacteria than microscaled particles due to their strong interfacial physicochemical interactions with the cells.


Subject(s)
Bacterial Toxins , Ferric Compounds , Gram-Negative Bacteria , Microscopy, Atomic Force
8.
J Hazard Mater ; 456: 131651, 2023 Aug 15.
Article in English | MEDLINE | ID: mdl-37245361

ABSTRACT

Extracellular polymeric substances (EPS) play a crucial role in controlling the mobility and bioavailability of heavy metal(loid)s in water, soils, and sediments. The formation of EPS-mineral complex changes the reactivity of the end-member materials. However, little is known about the adsorption and redox mechanisms of arsenate (As(V)) in EPS and EPS-mineral complexes. Here we examined the reaction sites, valence state, thermodynamic parameters and distribution of As in the complexes using potentiometric titration, isothermal titration calorimetry (ITC), FTIR, XPS, and SEM-EDS. The results showed that ∼54% of As(V) was reduced to As(III) by EPS, potentially driven by an enthalpy change (ΔH) of - 24.95 kJ/mol. The EPS coating on minerals clearly affected the reactivity to As(V). The strong masking of functional sites between EPS and goethite inhibited both the adsorption and reduction of As. In contrast, the weak binding of EPS onto montmorillonite retained more reactive sites for the reaction with As. Meanwhile, montmorillonite facilitated the immobilization of As to EPS through the formation of As-organic bounds. Our findings deepen the understanding of EPS-mineral interfacial reactions in controlling the redox and mobility of As, and the knowledge is important for predicting the behavior of As in natural environments.

9.
Sci Total Environ ; 886: 163992, 2023 Aug 15.
Article in English | MEDLINE | ID: mdl-37164102

ABSTRACT

Soil heavy metal pollution is the main risk for sustainable agriculture, especially the combination of As and Cd pollution in paddy fields which may lead to the superimposed accumulation in rice. There is an urgent need for environmental-friendly and cost-effective strategies to remediate the contamination of As and Cd in soils. In this work, a pot culture experiment was conducted in a As and Cd polluted paddy soil to explore the effects of organic fertilization (OF) and two water managements (continuous flooding, CF; intermittent irrigation, II) on the fractionation of As and Cd in soil, and the uptake of As and Cd by rice. The results showed that OF integrated with intermittent irrigation performed best in reducing the contents of As and Cd in rice grains by 58.9 % and 69.3 %, respectively, under compound pollution. The significant conversion of available As and Cd to stable species (specifically adsorbed and Fe-Mn/Al oxide bound) under OF + II were supported by the changes in an array of soil attributes such as pH, Eh, soluble Fe and dissolved organic carbon (DOC). Intermittent irrigation was more conducive to the accumulation of As outside the roots, and Fe-plaque prevented As uptake by roots and the translocation to shoots. While more accumulation of Fe-plaque along with Cd on root surface induced by continuous flooding is helpful for depressed assimilation of Cd by rice. Considering the combined contamination of As and Cd polluted in paddy soils, a management approach was proposed based on intermittent irrigation and application of organic fertilizer at the rate of 0.1 % (∼ 2.3 t/ha) in two phases (two weeks before planting or drainage). Organic fertilization will hold great promise in restoring polluted soils and maintaining soil health via suppressing the lability of heavy metals and providing nutrients.


Subject(s)
Metals, Heavy , Oryza , Soil Pollutants , Soil/chemistry , Cadmium/analysis , Water/metabolism , Soil Pollutants/analysis , Metals, Heavy/analysis , Oryza/chemistry , Water Supply , Fertilization
10.
Chemosphere ; 288(Pt 2): 132572, 2022 Feb.
Article in English | MEDLINE | ID: mdl-34655641

ABSTRACT

Dissolved organic matter (DOM) is one of the most active soil components, which plays pivotal roles in the migration and fate of heavy metals in soils. The interactions of heavy metals with DOM are controlled by the structure and properties of DOM. The changes of temperature have a significant effect on the content and composition of DOM and thus may affect the binding nature of heavy metals with DOM. In the current study, we conducted a 180-d incubation experiment with an arable soil at temperatures of 15, 30 and 45 °C. Fluorescence spectroscopy was used to examine the composition of DOM and two-dimensional correlation spectroscopy was applied to determine the binding intensity and sequence between cadmium (Cd) with DOM. Two humic-like substances (C1, C3) and a protein-like substance (C2) were identified from soil DOM. Elevated temperature changed the characteristic and structure of DOM. The humification degree and aromaticity of DOM increased from 15 °C to 30 °C but decreased at high temperature (45 °C). The alterations in temperature exert no impact on the type of organic functional groups in DOM binding with Cd. However, elevated temperature changed the binding sequence of Cd with DOM fractions. Polysaccharide, phenolic, and aromatic groups exhibited the fastest response to Cd at 15, 30, and 45 °C, respectively. These observations would provide a better understanding on the environmental behavior of Cd in arable soils under the context of global warming.


Subject(s)
Cadmium , Metals, Heavy , Dissolved Organic Matter , Soil , Temperature
11.
J Hazard Mater ; 430: 128365, 2022 05 15.
Article in English | MEDLINE | ID: mdl-35150996

ABSTRACT

Iron (hydr)oxides and their association with organic matter significantly affect the mobility of heavy metals in natural soils and sediments. However, the behavior of cadmium (Cd) during crystalline iron (hydr)oxide formation in the presence of humic acid (HA) is still unknown. In this study, the speciation of Cd in iron (hydr)oxide-HA coprecipitates were studied by extraction, surface complexation model (SCM) calculation and characterization of the composites during the aging. The results showed that aging promoted the stabilization of ~30-50% of the added Cd ions with minerals in the binary iron (hydr)oxide systems. The reduction of Cd occurred earlier than hematite formation, indicating that the aggregation of amorphous iron (hydr)oxide led to the initial immobilization of Cd. The presence of HA restricted the crystallization of iron (hydr)oxide by the formation of tight mineral nanoparticle-HA aggregates, while there were negligible changes in the speciation of Cd and Fe during aging at high HA concentrations. Therefore, HA promoted the adsorption of Cd onto amorphous iron (hydr)oxide but limited the partition of Cd to mineral aggregates. The knowledge about the role of HA in iron (hydr)oxide transformation and Cd speciation is of great significance for the prediction of heavy metal behavior in soils and sediments.


Subject(s)
Cadmium , Humic Substances , Adsorption , Cadmium/chemistry , Ferric Compounds/chemistry , Humic Substances/analysis , Iron , Minerals/chemistry , Oxides/chemistry
12.
Sci Total Environ ; 805: 150198, 2022 Jan 20.
Article in English | MEDLINE | ID: mdl-34537712

ABSTRACT

Dissolved organic matter (DOM) represents the most mobile and reactive pool of soil organic matter (SOM). Climate changes, such as global warming and altered precipitation exert considerable influences on the quality and quantity of soil DOM. However, rare reports have focused on the interactive effects of soil warming and increased precipitation. In the present study, we conducted a 90-day incubation experiment to investigate how the concentration, source and chemical composition of DOM from an Alfisol respond to the variations of temperatures (15, 30 and 45 °C) and moistures (40%, 60%, and 80% of saturated soil water content). Four DOM components were identified through fluorescence excitation emission matrix (EEM)-parallel factor analysis (PARAFAC). Increased temperature alone aggravated the decomposition of plant-derived aromatic components (C2 and C4) but promoted the accumulation of microbial-derived aliphatic carbon (C1) and tryptophan-like component (C3). Increased fungi/bacteria ratio with warming was responsible for the decomposition of plant-derived components. Warming-induced disassociation of Ca-bearing mineral to colloidal Ca facilitated the accrual of microbial-derived aliphatic DOM. Humidification alone and humidification + warming significantly increased the concentration of DOM and the percentage of plant-derived aromatic carbon (C2, C4), which was attributed to the release of Fe-bearing mineral-OC. Based on the above findings along with the results of two-way ANOVA and Variation partition analysis, we infer that moisture will play a dominant role in regulating the chemical composition of DOM in Alfisols under both warming and humidification which in turn impact global C cycling and the ultimate climate.


Subject(s)
Soil , Water Quality , Carbon , Humic Substances/analysis , Spectrometry, Fluorescence , Temperature , Water
13.
Environ Pollut ; 295: 118651, 2022 Feb 15.
Article in English | MEDLINE | ID: mdl-34883144

ABSTRACT

Bacteria and their secreted extracellular polymeric substances (EPS) are widely distributed in ecosystems and have high capacity for heavy metal immobilization. The knowledge about the molecular-level interactions with heavy metal ions is essential for predicting the behavior of heavy metals in natural and engineering systems. This comprehensive study using potentiometric titration, Fourier-transform infrared (FTIR) spectroscopy, isothermal titration calorimetry (ITC) and X-ray absorption fine structure (XAFS) was able to reveal the functional diversity and adsorption mechanisms for Pb onto bacteira and the EPS in greater detail than ever before. We identified mono-carboxylic, multi-carboxylic, phosphodiester, phosphonic and sulfhydryl sites and found the partitioning of Pb to these functional groups varied between gram-negative and gram-positive bacterial strains, the soluble and cell-bound EPS and Pb concentrations. The sulfhydryl and phosphodiester groups preferentially complexed with Pb in P. putida cells, while multifunctional carboxylic groups promoted Pb adsorption in B. subtilis cells and the protein fractions in EPS. Though the functional site diversity, the adsorption of Pb to organic ligands occurred spontaneously through a universal entropy increase and inner-sphere complexation mechanism. The functional group scale knowledge have implications for the modeling of heavy metal behavior in the environment and application of these biological resources.


Subject(s)
Extracellular Polymeric Substance Matrix , Metals, Heavy , Adsorption , Ecosystem , Lead , Spectroscopy, Fourier Transform Infrared
14.
J Hazard Mater ; 405: 124081, 2021 03 05.
Article in English | MEDLINE | ID: mdl-33153799

ABSTRACT

Mineral-organic interfacial reactions strongly influence the adsorption, distribution and bioavailability of metal cations in soil systems. The molecular binding mechanisms and distribution of Cd onto goethite, humic acid, Pseudomonas putida cells, and their composites at different mass ratios were studied through the combination of bulk adsorption coupled with EXAFS, ITC and SCM. In binary and ternary composites, the energetics of the overall adsorption of Cd was dominated by the entropy of Cd adsorption onto the organic fraction. The formation of a type-B HA bridging complex >FeOH-HACOOCdOH enhanced Cd adsorption by 10-30% at low Cd concentrations, and more than 93.5% of the adsorbed Cd was bound onto HA fraction. In ternary systems, the component additivity over-estimated Cd adsorption onto bacteria by ~21.8%, likely due to site blocking effects. Models involving the masking of phosphoryl sites and HA bridging reactions can simulate the distribution of Cd in the composites. Our modelling suggests that HA is the main scavenger of Cd under a range of environmental conditions, and that bacteria become important in affecting the distribution of Cd under lower pH settings. This study demonstrates the impact of iron oxide-HA-bacteria interactions on the fate and distribution of Cd in soils and associated environments.


Subject(s)
Humic Substances , Iron Compounds , Adsorption , Cadmium , Hydrogen-Ion Concentration , Minerals
15.
J Hazard Mater ; 420: 126603, 2021 10 15.
Article in English | MEDLINE | ID: mdl-34329105

ABSTRACT

A molecular-scale understanding of aqueous metal adsorption onto humic acid-iron (hydr)oxide coprecipitates, and our ability to model these interactions, are lacking. Here, the molecular-scale mechanisms for Cd binding onto iron (hydr)oxide-humic acid (HA) composites were probed using X-ray absorption fine structure (XAFS) spectroscopy and surface complexation modeling (SCM). The immobilization of Cd in (hydr)oxide precipitation systems occurs predominantly through adsorption onto the freshly-formed (hydr)oxide nanoparticles, and SCM calculations suggest a specific surface area of 2400 m2/g available for Cd. The solution and XAFS measurements indicate that HA promotes the precipitation of both Fe clusters and Fe-Cd associations mainly through ligand exchange reactions. Site masking reactions result in a dramatic blockage of functional sites on HA and ~45% migration of the adsorbed Cd to iron (hydr)oxide binding sites at high HA:Fe mass ratios. A composite model that accounts for both site masking between Fe ions and HA and the increase of Fe hydroxyl sites simulate the distribution of Cd in the composites reasonably well. Overall, this study demonstrates that the Fe clusters play an overriding role for heavy metal stabilization in coprecipitation systems, while HA promotes the immobilization of Cd by facilitating the flocculation and dispersion of Fe clusters.


Subject(s)
Humic Substances , Iron , Adsorption , Cadmium , Ferric Compounds , Humic Substances/analysis , Oxides
16.
Colloids Surf B Biointerfaces ; 198: 111497, 2021 Feb.
Article in English | MEDLINE | ID: mdl-33296824

ABSTRACT

Cyclic diguanylate monophosphate (c-di-GMP) is a ubiquitous intracellular secondary messenger which governs the transition from a bacterial cell's planktonic state to biofilm formation by stimulating the production of a variety of exopolysaccharide material by the bacterial cell. A range of genes involved in c-di-GMP signaling in the Gram-negative species Comamonas testosteroni have been identified previously, yet the physical-chemical properties of the produced extracellular polymeric substances (EPS) and the bacterial adhesion characteristics regulated by c-di-GMP are not well understood. Here, we modulated the in vivo c-di-GMP levels of Comamonas testosteroni WDL7 through diguanylate cyclase (YedQ) and phosphodiesterase (YhjH) gene editing. The strains and their adhesion properties were characterized by Fourier-transform infrared and two-dimensional correlation spectroscopy analysis (FTIR-2D CoS), contact angle and zeta potential measurements, atomic force microscopy (AFM) and extended-Derjaguin-Landau-Verwey-Overbeek (ExDLVO) analysis. Our results show that high c-di-GMP levels promoted the secretion of long-chain hydrophobic and electroneutral extracellular polysaccharides and proteins. The protein molecules on WDL7/pYedQ2 promoted the bacterial self-aggregation and adhesion onto negatively charged surfaces. In contrast, the reduction of intracellular c-di-GMP concentrations resulted in a nearly 80 % decrease in the adhesion of bacterial cells, although little change in the surface hydrophobicity or surface charge properties were observed for these cells relative to the wild type. These results indicate that the reduced adsorption of WDL7/YhjH that we observed may be caused by the flagellum-accelerated mobility at low c-di-GMP concentrations. Taken together, these results improve our mechanistic understanding of the effects of c-di-GMP in controlling bacterial physical-chemical properties and initial biofilm development.


Subject(s)
Comamonas testosteroni , Escherichia coli Proteins , Bacterial Adhesion , Bacterial Proteins/metabolism , Biofilms , Comamonas testosteroni/genetics , Comamonas testosteroni/metabolism , Cyclic GMP , Escherichia coli Proteins/metabolism , Gene Expression Regulation, Bacterial , Phosphoric Diester Hydrolases/genetics , Phosphoric Diester Hydrolases/metabolism
17.
Chin J Integr Med ; 26(12): 936-942, 2020 Dec.
Article in English | MEDLINE | ID: mdl-32572781

ABSTRACT

OBJECTIVE: To systematically evaluate the efficacy and safety of Tanreqing Injection (, TRQI) combined with conventional treatment on clinical outcomes in the treatment of patients with influenza. METHODS: The electronic databases searched were Cochrane Central Register of Controlled Trials (CENTRAL, The Cochrane Library), MEDLINE (PubMed), EMbase (OvidSP), Chinese Bio-medical Literature and Retrieval System (Sinomed), China National Knowledge Infrastructure Database (CNKI), China Science and Technology Journal Database (VIP) and WanFang Data Knowledge Service Platform, and we checked the reference sections of the retrieved articles as well. The search was performed in October 2018, and we used the randomized controlled trials (RCTs) that corresponded to the new diagnostic criteria for influenza. Two review authors independently screened the internalized articles in accordance with the Preferred Reporting Items for Systematic review and Meta-Analysis (PRISMA) statement checklist. We evaluated the quality of the articles and extracted the data from the studies using the Revmen5.3 software. RESULTS: We included 12 RCTs of over 882 cases in this meta-analysis. Compared to conventional treatment, TRQI combined with conventional treatment could increase the total effective rate [9 RCTs, n=648, odds ratio (OR): 4.92, 95% confidence interval (CI): 2.94, 8.24, P<0.0001, random effects model], decrease the average time for fever clearance [7 RCTs, n=564, mean difference (MD): -1.08, 95% CI: -1.68, -0.48, P=0.0004, random effects model] and decrease the time for resolution of cough (5 RCTs, n=362, MD: -1.76, 95% CI: -2.63, -0.90, P<0.0001, random effects model). CONCLUSION: Based on this meta-analysis of RCTs, TRQI combined with conventional treatment had a statistically significant benefit in increasing the total effective treatment rate and reducing the time for fever clearance as well as time for resolution of cough.


Subject(s)
Drugs, Chinese Herbal/therapeutic use , Influenza, Human/drug therapy , Cough/drug therapy , Drug Therapy, Combination , Fever/drug therapy , Humans , Injections , Randomized Controlled Trials as Topic
18.
Environ Int ; 131: 104995, 2019 10.
Article in English | MEDLINE | ID: mdl-31326822

ABSTRACT

The mineral-organo composites control the speciation, mobility and bioavailability of heavy metals in soils and sediments by surface adsorption and precipitation. The dynamic changes of soil mineral, organic matter and their associations under redox, aging and microbial activities further complicate the fate of heavy metals. Over the past decades, the wide application of advanced instrumental techniques and modelling has largely extended our understanding on heavy metal behavior within mineral-organo assemblages. In this review, we provide a comprehensive summary of recent progress on heavy metal immobilization by mineral-humic and mineral-microbial composites, with a special focus on the interfacial reaction mechanisms of heavy metal adsorption. The impacts of redox and aging conditions on heavy metal speciations and associations with mineral-organo complexes are discussed. The modelling of heavy metals adsorption and desorption onto synthetic mineral-organo composites and natural soils and sediments are also critically reviewed. Future challenges and prospects in the mineral-organo interface are outlined. More in-depth investigations are warranted, especially on the function and contribution of microorganisms in the immobilization of heavy metals at the complex mineral-organo interface. It has become imperative to use the state-of-the-art methodologies to characterize the interface and develop in situ analytical techniques in future studies.


Subject(s)
Metals, Heavy/chemistry , Minerals/chemistry , Soil Pollutants/chemistry , Adsorption , Biological Availability
19.
Chemosphere ; 200: 427-436, 2018 Jun.
Article in English | MEDLINE | ID: mdl-29501033

ABSTRACT

Though abundant studies have targeted the characterization of heavy metal adsorption by either clay minerals or bacteria, to date, minimal literature exists which specifically assesses bacteria-clay mineral interactions in the context of metal immobilization. The adsorption of Pb onto montmorillonite, Pseudomonas putida, and their 1:1, 2:1, 6:1 and 12:1 mass ratio composites were investigated by using a combination of atomic force microscope (AFM), X-ray diffraction (XRD), surface complexation modeling (SCM), Pb-LIII edge extended X-ray absorption fine structure (EXAFS) spectroscopy and isothermal titration calorimetry (ITC). The SCM and EXAFS demonstrated that Pb ions coordinate with phosphoryl and carboxyl functional groups on bacteria at low and high concentrations, respectively. The ITC analysis found adverse enthalpy values for Pb adsorption to permanent (-2.91 kJ/mol) and variable charge sites (6.93 kJ/mol) on montmorillonite. The ternary bridging model, EXAFS and ITC provide molecular and thermodynamic evidences for the formation of enthalpy driven (-4.74 kJ/mol) ternary complex (>AlO-Pb-PO4) in the composites. The proportion for the bridging structures increased at pH > 5 and high bacterial mass ratios. The formation of ternary complex did not result in the enhanced adsorption of Pb on the composites, but promoted the allocation of Pb on the mineral fraction. The results obtained from SCM, EXAFS and ITC may provide an essential assumption for predicting the speciation and fate of Pb in soils and associated environments.


Subject(s)
Aluminum Silicates/chemistry , Bentonite/chemistry , Calorimetry/methods , Lead/chemistry , Minerals/chemistry , Pseudomonas putida/physiology , X-Ray Diffraction/methods , Adsorption , Bacterial Adhesion , Bentonite/metabolism , Clay , Lead/metabolism , Microscopy, Atomic Force/methods , Models, Chemical , Pseudomonas putida/chemistry , Soil/chemistry , Surface Properties
20.
Chemosphere ; 193: 943-950, 2018 Feb.
Article in English | MEDLINE | ID: mdl-29874770

ABSTRACT

The accurate modeling of heavy metal adsorption in complex systems is fundamental for risk assessments in soils and associated environments. Bacteria-iron (hydr)oxide associations in soils and sediments play a critical role in heavy metal immobilization. The reduced adsorption of heavy metals on these composites have been widely reported using the component additivity (CA) method. However, there is a lack of a mechanism model to account for these deviations. In this study, we established models for Cd adsorption on goethite-Pseudomonas putida composites at 1:1 and 5:1 mass ratios. Cadmium adsorption on the 5:1 composite was consistent with the additivity method. However, the CA method over predicted Cd adsorption by approximately 8% on the 1:1 composite at high Cd concentration. The deviation was corrected by adding the site blockage reactions between P. putida and goethite. Both CA and "CA-site masking" models for Cd adsorption onto the composites were in line with the ITC data. These results indicate that CA method in simulating Cd adsorption on bacteria-iron oxides composites is limited to low bacterial and Cd concentrations. Therefore the interfacial complexation reactions that occur between iron (hydr)oxides and bacteria should be taken into account when high concentrations of bacteria and heavy metals are present.


Subject(s)
Cadmium/chemistry , Iron Compounds/chemistry , Metals, Heavy/chemistry , Minerals/chemistry , Adsorption
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