ABSTRACT
Bats are natural hosts of various coronaviruses (CoVs), including human CoVs, via an assumed direct zoonotic spillover or intermediate animal host. The present study aimed to investigate the circulation of CoVs in a bat colony in the Mediterranean region of Croatia. Guano and individual droppings from four bat species were sampled and tested with the E-gene sarbecovirus RT-qPCR, the pan-CoV semi-nested RT-PCR targeting the RdRp gene and NGS. Furthermore, bat blood samples were investigated for the presence of sarbecovirus-specific antibodies with the surrogate virus neutralization test (sVNT). The initial testing showed E-gene Sarebeco RT-qPCR reactivity in 26% of guano samples while the bat droppings tested negative. The application of RdRp semi-nested RT-PCR and NGS revealed the circulation of bat alpha- and betaCoVs. Phylogenetic analysis confirmed the clustering of betaCoV sequence with SARS-CoV-related bat sarbecoviruses and alpha-CoV sequences with representatives of the Minunacovirus subgenus. The results of sVNT show that 29% of bat sera originated from all four species that tested positive. Our results are the first evidence of the circulation of SARS-CoV-related coronaviruses in bats from Croatia.
ABSTRACT
Intermittent rivers, lotic habitats that cease to flow during the dry periods of the year, make up a large proportion of the world's inland waters and are an important source of water in arid regions such as the Mediterranean. Yet, water resources and riparian habitats in the Mediterranean regions are under diverse anthropogenic pressures, including land-use change. Odonata are widely used as a valuable tool for assessing freshwater ecosystems. Hence, with the aim of inspecting the conservation value of intermittent rivers in the Mediterranean based on the assemblages they support, we studied Odonata adults at four intermittent Mediterranean rivers in the Dinaric Western Balkans ecoregion with respect to the surrounding land-cover heterogeneity. We analyzed several diversity and conservation indices and recorded significant differences in Odonata species richness and Croatian Conservation Odonatological index among the studied rivers. Our findings showed that land use, as a long-term moderate anthropogenic impact, can enhance land-cover heterogeneity and in some cases even lead to increased Odonata diversity in intermittent rivers in the Mediterranean. Intermittent rivers provide habitat for several threatened Odonata species, suggesting the importance of Odonata in planning the conservation activities in these vulnerable ecosystems.