A Paleogenomic Reconstruction of the Deep Population History of the Andes.

There are many unanswered questions about the population history of the Central and South Central Andes, particularly regarding the impact of large-scale societies, such as the Moche, Wari, Tiwanaku, and Inca. We assembled genome-wide data on 89 individuals dating from ∼9,000-500 years ago (BP), with a particular focus on the period of the rise and fall of state societies. Today's genetic structure began to develop by 5,800 BP, followed by bi-directional gene flow between the North and South Highlands, and between the Highlands and Coast. We detect minimal admixture among neighboring groups between ∼2,000-500 BP, although we do detect cosmopolitanism (people of diverse ancestries living side-by-side) in the heartlands of the Tiwanaku and Inca polities. We also highlight cases of long-range mobility connecting the Andes to Argentina and the Northwest Andes to the Amazon Basin. VIDEO ABSTRACT.

Isotopic evidence of diet breadth hunter-gatherers changes during the Holocene in the Central Pampean Dunefields (Argentina, South America).

OBJECTIVES: Based on the analysis of stable carbon and nitrogen isotopes of bone collagen, stable carbon isotopes of bone apatite and an extensive AMS dating series (~10,000-299 years cal BP), the human paleodiets of 34 individuals from the Central Pampean Dunefields (Argentina, South America) are evaluated. MATERIALS AND METHODS: These data are interpreted from the isotopic ecology of animals with archaeofaunal evidence of consumption and isotopic models of human diet. Multivariate carbon and nitrogen stable isotope model and Bayesian stable isotope ellipses were used to interpret human diets. RESULTS: Analysis of isotopic values indicates intake of enriched lipids and/or carbohydrates in relation to the proteins consumed throughout the Holocene. The isotopic values of Middle Holocene humans in relation to the values of exploited resources point out that individuals obtained protein mainly from guanaco. Subsequently, there was an increase in the human breadth diet during the Late Holocene, with a greater relevance of small prey of high trophic levels and vegetables. This contrasts with zooarchaeological information indicating generalist human diets during the Middle Holocene and specialized human diets in guanaco during the Late Holocene. CONCLUSIONS: It is proposed that during the Middle Holocene arid period, the combination of low human population density and high residential mobility in wide foraging ranges allowed the guanaco to be the main source of protein. During the Late Holocene humid period, there was an increase in human population density and a decrease in residential mobility, which caused greater pressure on foraging territories and increased dietary breadth.

Ancient mitochondrial genomes from the Argentinian Pampas inform the early peopling of the Southern Cone of South America.

The Southern Cone of South America (SCSA) is a key region for investigations about the peopling of the Americas. However, little is known about the eastern sector, the Argentinian Pampas. We analyzed 18 mitochondrial genomes-7 of which are novel-from human skeletal remains from 3 Early to Late Holocene archaeological sites. The Pampas present a distinctive genetic makeup compared to other Middle to Late Holocene pre-Columbian SCSA populations. We also report the earliest individuals carrying SCSA-specific mitochondrial haplogroups D1j and D1g from Early and Middle Holocene, respectively. Using these deep calibration time points in Bayesian phylogenetic reconstructions, we suggest that the first settlers of the Pampas were part of a single and rapid dispersal ∼15,600 years ago. Finally, we propose that present-day genetic differences between the Pampas and the rest of the SCSA are due to founder effects, genetic drift, and a partial population replacement ∼9,000 years ago.