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1.
Pediatr Dev Pathol ; 25(3): 339-344, 2022.
Article in English | MEDLINE | ID: mdl-35227120

ABSTRACT

Constitutional mismatch repair deficiency (CMMRD) syndrome is characterized by biallelic mutations in a mismatch repair gene and is associated with development of childhood cancers and symptoms resembling neurofibromatosis type 1, like café-au-lait spots. We describe the extremely rare case of a 12-year-old male presenting with several light brown macular lesions on the skin, gastrointestinal diffuse large B-cell lymphoma, adenomatous polyposis throughout the gastrointestinal tract and an intra-abdominal invasive carcinoma derived from upper gastrointestinal system. All neoplasia, as well as normal tissues, showed loss of Msh6 expression with immunohistochemistry. Molecular studies showed pathogenic homozygous p.F1088Sfs*2 mutation in MSH6. Furthermore, signs consistent with immunodeficiency, namely decreased levels of IgG and IgA in the serum, nodular lymphoid hyperplasia and EBV-associated plasma cell proliferation with monotypic kappa light chain expression in the ileum, were also noted. Our case depicts the phenotypic diversity of CMMRD syndrome and emphasizes its association with immunodeficiency, raising awareness to a feature not widely recognized.


Subject(s)
Brain Neoplasms , Carcinoma , Epstein-Barr Virus Infections , Lymphoma, Large B-Cell, Diffuse , Neoplastic Syndromes, Hereditary , Brain Neoplasms/genetics , Cell Proliferation , Child , Colorectal Neoplasms , DNA Mismatch Repair , DNA-Binding Proteins/genetics , Epstein-Barr Virus Infections/complications , Epstein-Barr Virus Infections/diagnosis , Herpesvirus 4, Human/genetics , Humans , Lymphoma, Large B-Cell, Diffuse/diagnosis , Lymphoma, Large B-Cell, Diffuse/genetics , Male , Mismatch Repair Endonuclease PMS2/genetics , Mutation , Neoplastic Syndromes, Hereditary/diagnosis
2.
Metab Brain Dis ; 37(4): 1283-1287, 2022 04.
Article in English | MEDLINE | ID: mdl-35254599

ABSTRACT

Gaucher disease type 2 is the most progressive and the rarest form of Gaucher disease, defined as the acute neuronopathic type. We presented two GD2 patients who died before three months of age due to severe septicemia, respiratory and liver failure. One was homozygous for a novel GBA variant c.590 T > A (p.197 K), and the second homozygous for the known GBA mutation c.1505G > A (p.R502H). Ichthyosis, hydrops fetalis, apnea, myoclonic seizures, and hepatosplenomegaly occurred in both patients, but hypertrophic cardiomyopathy was observed only in the second and unilateral cataract in the first patient. Due to the disease's early and rapid neurological progression, we did not administer ERT to our patients. It is strongly believed that early diagnosis is essential, and prenatal diagnosis makes genetic counselling possible for future pregnancies.


Subject(s)
Gaucher Disease , Female , Gaucher Disease/complications , Gaucher Disease/diagnosis , Gaucher Disease/genetics , Homozygote , Humans , Hydrops Fetalis/etiology , Hydrops Fetalis/genetics , Mutation/genetics , Pregnancy
3.
Neurol Sci ; 42(5): 2045-2057, 2021 May.
Article in English | MEDLINE | ID: mdl-33443663

ABSTRACT

Neurofibromatosis type 1 (NF1) is caused by mutations in the NF1 gene. This retrospective study aims to evaluate the clinical manifestations and brain magnetic resonance images (MRI) analysis in 60 genetically confirmed NF1 patients. The results of next-generation sequencing (NGS), Sanger sequencing, and MLPA of NF1 gene were evaluated. A total of 54 different variants were identified. Fourteen out of them were novel variants (25.9%). Patients who complied with NIH criteria had most frequently frameshift variants (11/32 patients), and those with only CALMs had missense variants (9/28 patients). Neurofibromatosis type 1 bright objects (NBOs) on T2-weighted MRI were detected in 42 patients (42/56; 75%). These brain lesions were detected mostly in basal ganglia and in cerebellar vermis. NBOs were detected more in the patients who complied with NIH criteria (80.6%) compared to those who were only CALMs (68%). While frameshift variants (33.3%) were the most common type variants in the patients who had NBOs, the most common variants were splicing (35.7%) and missense (35.7%) variants in the patients whose MRIs were normal. Frameshift variants (11/28 patients; 39.3%) were the most common in the patients with more than one brain locus involvement. Therefore, we consider that frameshift variants may be associated with increased incidence of NBOs and involvement of more than one brain locus. In addition, NBOs may occur less frequently in the patients with splicing variants. To our knowledge, this is the first study evaluated the relationship between NF1 gene variants and NBOs. Future studies may help us understand the etiology of NBOs.


Subject(s)
Neurofibromatosis 1 , Brain/diagnostic imaging , Genes, Neurofibromatosis 1 , Humans , Magnetic Resonance Imaging , Neurofibromatosis 1/diagnostic imaging , Neurofibromatosis 1/genetics , Neurofibromin 1 , Retrospective Studies
4.
Turk J Med Sci ; 51(2): 802-812, 2021 04 30.
Article in English | MEDLINE | ID: mdl-33306336

ABSTRACT

Background/aim: Bone disease is one of the most prominent complications after kidney transplantation. Bone diseases include osteoporosis, persistent secondary hyperparathyroidism, and avascular necrosis (AVN). We investigated the relationship between the polymorphisms of the vitamin D receptor (VDR) gene and bone diseases occurring after kidney transplantation. Materials and methods: The study consists of 234 kidney allograft recipients with a minimum follow-up of five years after kidney transplantation. Patients with glomerular filtration rates less than 30 mL/min/1.73m2, a history of parathyroidectomy, bisphosphonate use pre- or post-transplantation, and cinacalcet use posttransplantation excluded. We evaluated associations between the polymorphisms of the VDR gene (BsmI, TaqI, ApaI, FokI, and Cdx2), the first-year bone mineral density (BMD) scores, persistent secondary hyperparathyroidism, and AVN. Results: Patients with low BMD scores were significantly younger (P = 0.03) and had higher intact parathormone (iPTH) levels (P = 0.03). Cdx2 TT genotype significantly increases the risk of low BMD scores (OR: 3.34, P = 0.04). Higher phosphate levels were protective against abnormal BMD scores (OR: 0.53; P = 0.03). Patients with persistent hyperparathyroidism had significantly longer dialysis vintage and higher pretransplantation iPTH levels (P = 0.02 and P < 0.001, respectively). Cdx2, CT/TT, and ApaI CA/AA genotypes significantly increase the risk of persistent hyperparathyroidism (OR: 6.81, P < 0.001, OR: 23.32, P < 0.001, OR:4.01, P = 0.02, and OR: 6.30, P = 0.01; respectively). BsmI CT/TT genotypes were found to increase AVN risk with an HR of 3.48 (P = 0.03). Higher hemoglobin levels were also found to decrease AVN risk with an HR of 0.76 (P = 0.05). Conclusion: Certain VDR gene polymorphisms are associated with a higher risk for bone diseases after kidney transplantation.


Subject(s)
Bone Density/genetics , Kidney Transplantation/adverse effects , Osteonecrosis , Polymorphism, Genetic/genetics , Receptors, Calcitriol/genetics , Adult , Female , Genotype , Humans , Hyperparathyroidism, Secondary/epidemiology , Hyperparathyroidism, Secondary/genetics , Male , Middle Aged , Parathyroid Hormone
5.
J Clin Pediatr Dent ; 44(4): 262-267, 2020 Aug 01.
Article in English | MEDLINE | ID: mdl-33167018

ABSTRACT

OBJECTIVE: To evaluate orodental, facial, clinical and molecular characteristics of the patients with Noonan Syndrome (NS). STUDY DESIGN: The orodental, clinical and molecular characteristics of 29 mutation-positive patients with NS were recorded. Orodental examination was performed in 17 patients. All exons and exonintron boundries of PTPN11 and SOS1 genes were analyzed by Sanger sequencing. RESULTS: A total of 29 patients with NS from 27 unrelated families were included in the study. Seventeen patients were examined by a specialist in oral medicine. The most common orodental findings were high-arched palate (n=13), gingivitis (n=6) and severe caries (n=6). Anterior open bite, posterior cross bite, Class II malocclusion, hypodontia, prognathism (maxillary or mandibular), macroglossia and gingival hyperplasia were also detected. Thirteen different mutations were observed in PTPN11 gene and exon 3 was the hotspot region. Hypodontia was detected in two patients who had the same mutation in PTPN11 gene, c.181G>A, p.D61N. CONCLUSION: This study indicated a high prevalance of orodental problems including high-arched palate, severe dental caries and gingivitis in patients with mutation-positive NS. The mutation in PTPN11 gene, c.181G>A, p.D61N, may be associated with hypodontia in patients with NS.


Subject(s)
Dental Caries , Noonan Syndrome , Open Bite , Protein Tyrosine Phosphatase, Non-Receptor Type 11 , Humans , Mutation , Noonan Syndrome/genetics , Phenotype , Protein Tyrosine Phosphatase, Non-Receptor Type 11/genetics
6.
Cytogenet Genome Res ; 148(1): 19-24, 2016.
Article in English | MEDLINE | ID: mdl-27166162

ABSTRACT

We report on a 4.5-year-old boy with interstitial monosomy 9p in a unique and complex de novo rearrangement. The patient had been referred for craniofacial dysmorphism, delayed psychomotor development, and various congenital malformations. We combined cytogenetic studies and FISH analyses to delineate the deletion. The result of our cytogenetic studies was 46,XY,der(9)(p22pter). In order to confirm the deletion, we also performed FISH analysis, which showed that the 9p subtelomeric region was inserted into chromosome 13. Molecular karyotyping was performed to describe the exact genomic breakpoints of the rearrangement. In conclusion, this case is a complex insertion/deletion abnormality which has not been reported before.


Subject(s)
Abnormalities, Multiple/genetics , Child, Preschool , Chromosome Breakpoints , Chromosome Deletion , Chromosomes, Human, Pair 13/genetics , Chromosomes, Human, Pair 9/genetics , Developmental Disabilities/genetics , Humans , INDEL Mutation/genetics , In Situ Hybridization, Fluorescence , Intellectual Disability/genetics , Karyotype , Male , Syndrome , Telomere/genetics
7.
Mol Vis ; 19: 196-202, 2013.
Article in English | MEDLINE | ID: mdl-23378733

ABSTRACT

PURPOSE: Screening of mutations in the paired box 3 (PAX3) gene in three generations of a Turkish family with Waardenburg syndrome type 1 (WS1). METHODS: WS1 was diagnosed in a 13-month-old girl according to the WS Consortium criteria. Detailed family history of the proband revealed eight affected members in three generations. Routine clinical and audiological examination and ophthalmologic evaluation were performed on eight affected and five healthy members of the study family. Dystopia canthorum was detected in all affected patients; however, a brilliant blue iris was present in five patients who also had mild retinal hypopigmentation. Genomic DNA was extracted from the peripheral blood of affected and unaffected individuals in the family as well as 50 unrelated healthy volunteers. All coding exons and adjacent intronic regions of PAX3 were sequenced directly. RESULTS: A novel missense heterozygous c.788T>G mutation was identified in eight patients. This nucleotide alteration was not found in unaffected members of the study family or in the 50 unrelated control subjects. The mutation causes V263G amino-acid substitution in the homeodomain of the PAX3 protein, which represents the 45(th) residue of helix 3. CONCLUSIONS: We identified a novel missense c.788T>G mutation in PAX3 in a family with Waardenburg syndrome with intrafamilial phenotypic heterogeneity.


Subject(s)
Mutation, Missense , Paired Box Transcription Factors/genetics , Waardenburg Syndrome/genetics , Amino Acid Substitution/genetics , Base Sequence , Case-Control Studies , DNA Mutational Analysis , Eye/pathology , Female , Genetic Carrier Screening , Humans , Infant , Male , PAX3 Transcription Factor , Pedigree , Phenotype , Turkey , Waardenburg Syndrome/pathology
8.
Eur J Pediatr ; 171(10): 1497-502, 2012 Oct.
Article in English | MEDLINE | ID: mdl-22644991

ABSTRACT

UNLABELLED: Clinical findings illustrate the wide spectrum of the phenotypic manifestations of 45,X/46,XY mosaicism in the sex chromosome disorders of sex differentiation (DSD). The objective of study is to evaluate the characteristics of 45,X/46,XY patients and questioning of their place within the DSD categorization. The clinical findings of 11 patients with 45,X/46,XY mosaicism are described including the presentation, gonadal morphology, genital anatomy, and the hormone levels among 285 patients with DSD evaluated. Sixty-seven patients were diagnosed with sex chromosome DSD (50 Turner, three Klinefelter, ten 45,X/46,XY gonadal disgenesis, one 45X/46,XY ovotesticular DSD, one 47,XYY ovotesticular DSD, and two 46,XX/46,XY ovotesticular DSD). The type and the percentage of patients with 45,X/46,XY mosaicism were as follows: Four cases of mix gonadal dysgenesis, four cases of partial gonadal dysgenesis, two cases of complete gonadal dysgenesis, one case of ovotesticular DSD. On the other hand, another patient that has 45,X/46,XX mosaicism was diagnosed with MGD with the presence of the streak gonad on the right side and the testis on the other side. CONCLUSION: We suggest that sex chromosome DSD categorization can include 45,X/46,XY PGD and 45,X/46,XY CGD. Mixed gonadal dysgenesis may be also placed among the disorders of testicular differentiation of 46,XY DSD subdivision.


Subject(s)
Genetic Heterogeneity , Gonadal Dysgenesis, Mixed/classification , Gonadal Steroid Hormones/blood , Mosaicism/classification , Sex Chromosome Disorders of Sex Development/classification , Adolescent , Child , Child, Preschool , Female , Genitalia/abnormalities , Gonadal Dysgenesis, Mixed/genetics , Humans , Infant , Infant, Newborn , Karyotype , Male , Phenotype , Retrospective Studies , Sex Chromosome Disorders of Sex Development/genetics , Turkey
9.
J Pediatr Endocrinol Metab ; 24(11-12): 965-70, 2011.
Article in English | MEDLINE | ID: mdl-22308849

ABSTRACT

We aimed to determine the prevalence and clinical characteristics of non-classical congenital adrenal hyperplasia (NCCAH) with V281L mutation in patients with premature pubarche. An adrenocorticotrophic hormone (ACTH) stimulation test was performed in 14 of the 159 patients with premature pubarche (PP). Patients whose stimulated 17alpha-hydroxyprogesterone (17-OHP) level on the ACTH test was > or =10 ng/mL underwent a mutational analysis of the CYP21 gene. NCCAH was defined in nine (5.7%) patients, all of whom had the V281L mutation. Four of the NCCAH patients were homozygote and four of them were heterozygote. One other patient was compound heterozygote for V281L mutation and the I2 splice mutation. One of the patients with V281L heterozygous mutation developed true precocious puberty and the other one had rapid progressive early puberty and developed polycystic ovary syndrome. ACTH stimulated 17-OHP > or = 10 ng/mL in PP patients is load star to mutation analysis and heterozygote patients should be followed for clinical and biological hyperandrogenism up to completion of the whole 'genome sequence'.


Subject(s)
Adrenal Hyperplasia, Congenital/epidemiology , Adrenal Hyperplasia, Congenital/genetics , Point Mutation , Puberty, Precocious/epidemiology , Puberty, Precocious/genetics , Steroid 21-Hydroxylase/genetics , Adrenal Hyperplasia, Congenital/physiopathology , Child , Child, Preschool , Female , Heterozygote , Homozygote , Humans , Male , Polycystic Ovary Syndrome/epidemiology , Polycystic Ovary Syndrome/genetics , Prevalence
10.
Sci Rep ; 11(1): 10967, 2021 05 26.
Article in English | MEDLINE | ID: mdl-34040069

ABSTRACT

The chronological age of a person is a key determinant of etiology and prognosis in the setting of ischemic stroke. Telomere length, an indicator of biological aging, progressively shortens with every cell cycle. Herein, we determined telomere length from peripheral blood leukocytes by Southern blot analyses in a prospective cohort of ischemic stroke patients (n = 163) and equal number of non-stroke controls and evaluated its association with various ischemic stroke features including etiology, severity, and outcome. A shorter telomere length (i.e. lowest quartile; ≤ 5.5 kb) was significantly associated with ischemic stroke (OR 2.95, 95% CI 1.70-5.13). This significant relationship persisted for all stroke etiologies, except for other rare causes of stroke. No significant association was present between admission lesion volume and telomere length; however, patients with shorter telomeres had higher admission National Institutes of Health Stroke Scale scores when adjusted for chronological age, risk factors, etiology, and infarct volume (p = 0.046). On the other hand, chronological age, but not telomere length, was associated with unfavorable outcome (modified Rankin scale > 2) and mortality at 90 days follow-up. The association between shorter telomere length and more severe clinical phenotype at the time of admission, might reflect reduced resilience of cerebral tissue to ischemia as part of biological aging.


Subject(s)
Brain Ischemia/genetics , Telomere Shortening , Age of Onset , Aged , Aging/genetics , Brain Ischemia/epidemiology , Brain Ischemia/pathology , Case-Control Studies , Chromosomes, Human/ultrastructure , Comorbidity , Female , Genetic Predisposition to Disease , Humans , Leukocytes/ultrastructure , Male , Middle Aged , Phenotype , Prospective Studies , Risk , Risk Factors , Smoking/epidemiology , Turkey/epidemiology
11.
Ann Hematol ; 89(4): 359-64, 2010 Apr.
Article in English | MEDLINE | ID: mdl-19798502

ABSTRACT

The aim of this study was to describe the characteristics and outcome in a group of pediatric patients with hematological malignancies who developed hemophagocytosis at diagnosis or during the disease course. Eight patients with hematological malignancy and associated hemophagocytosis were included. The initial diagnosis was juvenile myelomonocytic leukemia (JMML) in five, nonlymphoblastic leukemia (ANLL) in two, and T-cell lymphoma associated with myeloproliferative syndrome in one patient. Hemophagocytosis was concomitantly present at the time of diagnosis of the primary disease in four of the five patients with JMML and in the two patients with ANLL. Three had abnormalities related to chromosome 8 [(trisomy 8, monosomy 8, and t (8;13) (p11; p12)], and one had inversion 16. Multiple chromosomal losses were present in one patient, including both chromosomes 8 and 16. Bone marrow karyotyping revealed 46, XX; 47, XXX mosaicism in one patient. Two patients had PTPN11 mutation and one patient k-RAS mutation. The patients with JMML and neurofibromatosis (n = 2), the patient with lymphoma and t (8;13) positive AML, and a fourth patient with PTPN11 mutation did not remit and had unfavorable outcomes.


Subject(s)
Leukemia, Myelomonocytic, Juvenile/pathology , Phagocytosis , Adolescent , Antineoplastic Agents/therapeutic use , Child , Child, Preschool , Chromosome Aberrations , Female , Genes, ras , Humans , Infant , Leukemia, Myeloid, Acute/drug therapy , Leukemia, Myeloid, Acute/genetics , Leukemia, Myeloid, Acute/pathology , Leukemia, Myelomonocytic, Juvenile/drug therapy , Leukemia, Myelomonocytic, Juvenile/genetics , Lymphoma, T-Cell/complications , Lymphoma, T-Cell/drug therapy , Lymphoma, T-Cell/genetics , Lymphoma, T-Cell/pathology , Male , Mutation , Myeloproliferative Disorders/complications , Myeloproliferative Disorders/drug therapy , Myeloproliferative Disorders/genetics , Myeloproliferative Disorders/pathology , Protein Tyrosine Phosphatase, Non-Receptor Type 11/genetics , Treatment Outcome
12.
J Pediatr Hematol Oncol ; 32(8): 617-20, 2010 Nov.
Article in English | MEDLINE | ID: mdl-20818271

ABSTRACT

A 9-year-old girl with intractable anemia, rare mucocutaneous bleeding, and pallor was presented. Hemoglobin was 49 g/L; reticulocyte 0.79%, mean corpuscular volume 81 fL, platelet 37×109/L; white blood cell count 3.2×109/L with dysmorphic cells in peripheric blood. Further evaluation revealed 10% cellularity with grade IV reticulin fibrosis, immature, and/or dysplastic hematopoietic cells without sideroblasts, or blast increase in biopsy, Monosomy 8 was found in bone marrow aspiration material using FISH. Vitamin B12, folic acid, hemoglobin electrophoresis, immunoglobulin levels, CD55, CD59, complement 3, 4, abdominal ultrasonography, chest x-ray were normal; diepoxybutane, acid ham, sucrose lysis tests, viral serologies, antinuclear antibody, anti DNA were negative. On diagnosis of "Myelodysplastic Syndrome-refractory cytopenia with hypocellular fibrosis," she received a successful allogeneic BM transplantation from her full matched sibling.


Subject(s)
Anemia/pathology , Myelodysplastic Syndromes/pathology , Primary Myelofibrosis/pathology , Anemia/therapy , Bone Marrow Transplantation , Child , Diagnosis, Differential , Female , Humans , Myelodysplastic Syndromes/therapy , Primary Myelofibrosis/therapy
13.
Oncol Res ; 17(10): 455-62, 2009.
Article in English | MEDLINE | ID: mdl-19725225

ABSTRACT

Telomerase is a specialized cellular reverse transcriptase that adds telomeric repeats (TTAGGG) at the ends of each chromosome. Nearly the complete spectrum of human cancers has been shown to be telomerase positive. The understanding of the telomerase regulation in concert with other genetic alterations in the process of malignant transformation of human cells has important clinical and practical implications. Regulation of telomerase activity (TA) is highly complex, and both putative positive and negative regulators have been reported. However, the mechanisms involved in telomerase regulation are not fully established. Identification of additional telomerase components and associated proteins will certainly contribute to further investigations of the effect of telomerase in telomere elongation, telomere length maintenance, oncogenesis, and functionally new, unidentified cellular functions. In this study our aim was to determine the chromosomal localizations of putative unidentified telomerase activator(s) and/or repressor(s) by high resolution-comparative genomic hybridization (HR-CGH) in highly telomerase expressing gastric tumor samples. For this purpose TAs and genomic imbalances were identified in the same tumor samples and relation between these was evaluated. Genomic changes affecting telomerase activity in 50 gastric tumor samples were investigated by HR-CGH. We have found that genomic imbalances including 1q+, 8p+, 8q+, 10q+, 17p-, and 20p+ are associated with the higher telomerase activity. Our results suggest that 1q24, 8p21-p11.2, 8q21.1-q23, 10q21-qter and 20pter-p11.2 may contain putative telomerase activator(s), whereas the 17p12 region may harbor candidate telomerase suppressor(s).


Subject(s)
Chromosomes, Human/genetics , Gene Expression Regulation, Enzymologic/physiology , Genomic Instability , Stomach Neoplasms/genetics , Telomerase/genetics , Chromosome Aberrations , Comparative Genomic Hybridization , Humans
14.
J Psychiatr Res ; 111: 169-185, 2019 04.
Article in English | MEDLINE | ID: mdl-30776705

ABSTRACT

Compared to the general population, individuals diagnosed with Schizophrenia (SCZ) experience a higher frequency and an earlier onset of chronic medical disorders, resulting in a reduction in life expectancy by an average of 15-25 years. Recently, it has been hypothesized that SCZ is a syndrome of accelerated aging. Childhood adversity was also associated with the pathogenesis and course of SCZ. Our hypothesis was that both SCZ patients and their unaffected siblings would have shorter telomere length (TL) compared to of non-clinical controls. Our additional goals were to determine (1) whether shorter TL correlates with intermediate phenotypes of SCZ (i.e. Psychosis-like symptoms and schizotypal traits); and (2) whether childhood adversities have a moderating role in TL shortening among SCZ and their unaffected siblings. To this end, SCZ patients (n = 100), their unaffected siblings (n = 100) and non-clinical controls (n = 100) were enrolled. The main variables were TL, measured by aTL-qPCR; psychotic-like and schizotypal symptoms, assessed by The Community Assessment of Psychic Experience (CAPE) and the Structured Interview for Schizotypy-Revised (SIS-R), respectively; and childhood adversities evaluated by the Childhood Experience of Care and Abuse (CECA)-Interview. Potentially relevant variables also included in the analyses were: Global Assessment of Functioning (GAF) scores, cognitive performance, and socio-demographic features. In contrast to our hypothesis patients had similar TL when compared to the non-clinical controls. Interestingly, unaffected siblings had longer TL compared to both patients and controls (p < 0.001). Independent from group status a negative correlation was observed between TL and psychotic-like symptoms as rated by the CAPE (p < 0.01). Childhood adversities, especially loneliness between ages 0 and 11 were also negatively associated with TL (p < 0.05). Our findings suggest that psychometric liability to psychosis and childhood adversities may be associated with shorter TL. Unaffected siblings had longer TL, suggesting the potential role of resilience on both the TL and the clinical presentation. These findings must be considered preliminary, calling for larger-scale replication efforts.


Subject(s)
Adverse Childhood Experiences , Disease Susceptibility , Loneliness/psychology , Psychological Trauma/psychology , Psychotic Disorders/genetics , Psychotic Disorders/psychology , Schizophrenia/genetics , Telomere Shortening/genetics , Adolescent , Adult , Female , Gene-Environment Interaction , Humans , Male , Middle Aged , Psychometrics , Resilience, Psychological , Siblings , Young Adult
15.
Genet Test Mol Biomarkers ; 22(12): 680-685, 2018 Dec.
Article in English | MEDLINE | ID: mdl-30489176

ABSTRACT

Aims: Survivin is involved in the inhibition of apoptosis and the regulation of cell division. In addition to wild-type survivin (survivin-wt), at least four splice variants with differential functions (ΔEx3 and 3B antiapoptotic, and 2α and 2B proapoptotic) have been identified. Survivin is highly expressed in several cancers, including hematological malignancies. Although acute lymphoblastic leukemia (ALL) is the most frequent malignancy in children, studies that investigated survivin expression in ALL are limited, and there is no study on 3B and 2α expression in ALL. Therefore the expression of survivin-wt and its splice variants was investigated in pediatric B-cell ALL patients. Materials and Methods: The expression of survivin-wt and its four splice variants was investigated by quantitative real-time polymerase chain reaction in archival RNA samples of 35 pediatric B-cell ALL patients. Patients were divided into high- and standard-risk groups according to age, white blood cell count, extramedullary involvement, and genetic risk factors; expression of survivin variants was compared between these two risk groups. Results: We found that the ratio of survivin-ΔEx3/wild type (WT) expression was higher in the low-risk group than in the high-risk group. Conclusion: Comparative analysis between the high- and low-risk B-cell ALL groups indicated that the survivin-ΔEx3/WT expression ratio could potentially be used in risk classification for pediatric B-cell ALL.


Subject(s)
Neoplasm Proteins/genetics , Precursor B-Cell Lymphoblastic Leukemia-Lymphoma/genetics , Survivin/genetics , Adolescent , Biomarkers, Tumor , Child , Child, Preschool , DNA Primers , Exons/genetics , Female , Gene Expression Regulation, Leukemic , Humans , Infant , Introns/genetics , Male , Neoplasm Proteins/biosynthesis , Precursor B-Cell Lymphoblastic Leukemia-Lymphoma/epidemiology , Precursor B-Cell Lymphoblastic Leukemia-Lymphoma/metabolism , Protein Isoforms/biosynthesis , Protein Isoforms/genetics , RNA, Messenger/biosynthesis , RNA, Neoplasm/biosynthesis , Risk , Survivin/biosynthesis
16.
Adv Ther ; 24(2): 269-72, 2007.
Article in English | MEDLINE | ID: mdl-17565916

ABSTRACT

Telomeres--tandem repeats at the ends of mammalian chromosomes--serve as clocks that pace cellular aging in vitro and in vivo and they may be a major determinant of human aging, not only at the cellular level but also at the organ and perhaps systemic levels. In industrialized nations, pulse pressure rises with age, and this might serve as a phenotype of biologic aging of the vasculature. In this study, investigators explored the relationship between telomere length in white blood cells and systolic/diastolic and pulse pressures. Telomere lengths of 37 female volunteers who were 50 years of age were measured with the fiber fluorescence in situ hybridization technique. With the use of Spearman's correlation coefficient, no relationship was found between pulse pressure, systolic blood pressure, diastolic blood pressure, body mass index, and telomere length. The results suggest that telomere length is not an indicator of blood pressure dynamics.


Subject(s)
Blood Pressure/genetics , Telomere , Body Mass Index , Female , Humans , Leukocytes , Middle Aged , Statistics, Nonparametric
17.
Turk J Pediatr ; 49(1): 61-8, 2007.
Article in English | MEDLINE | ID: mdl-17479646

ABSTRACT

Fallot tetralogy (FT) is the most frequently observed conotruncal heart defect (CTHD) and accompanies 15% of the 22q11 deletion syndromes, DiGeorge/ velocardiofacial (DGS/VCFS) syndromes. TBX1 is a gene located in the 22q11 region and has a role in neural crest migration and conotruncal development. The mouse Tbx1 locus shows 98% homology with TBX1. DGS/VCFS-like aortic arch abnormalities in the mouse were attributed to deletions in this locus. The T-box region, common to both mice and humans, is part of TBX1 with proven effects on heart outflow track anomalies. The role of TBX1 in non-syndromic CTHDs is still unclear. In this study, we screened the TBX1 gene T-box region exons in 50 FT patients without 22q11 deletion and in 50 healthy volunteers. Our study did not show any disease causing mutations, but one polymorphic change. These results do not support a major role of the T-box region in the etiology of isolated FT. Furthermore, this study also confirms that mouse cardiac-development study models do not always provide an explanation for human phenotype-genotype correlations.


Subject(s)
T-Box Domain Proteins/genetics , Tetralogy of Fallot/physiopathology , Child , Child, Preschool , Female , Genetic Testing , Humans , Infant , Infant, Newborn , Male , Mutation , Neural Crest , Polymerase Chain Reaction , Tetralogy of Fallot/genetics
18.
Turk J Pediatr ; 49(1): 69-74, 2007.
Article in English | MEDLINE | ID: mdl-17479647

ABSTRACT

The objective in this study was to evaluate the angiotensin converting enzyme (ACE) insertion/deletion (I/D) gene polymorphism in premature infants with and without respiratory distress within the first 24 hours of life. Totally, 87 premature babies who were followed up in the neonatal unit were included in the study. Of these babies, 41 had respiratory distress, and constituted the patient group. The remaining 46 babies who did not have respiratory distress constituted the control group. Blood samples were obtained from the babies within the first few days of life prior to administration of any blood product. The ACE gene insertion (I) and deletion (D) polymorphism was investigated using polymerase chain reaction method. The I/I polymorphism was frequent in the patient group and the D/D polymorphism was frequent in the control group (p < 0.05). There was no relationship between the ACE gene polymorphism and hospital stay, ventilation or oxygen consumption duration of the patients. In addition, taking into consideration the gestational age, no association was found between ACE gene polymorphism and birth weights of the babies. The I/I genotype was considered a risk factor for pulmonary disorders in neonates as the I/I variant was more frequent in the neonates with respiratory distress than in healthy newborns. The ACE I/I genotype is associated with an increased risk of respiratory disorders among premature infants and the D/D genotype is a protective factor for respiratory disorders, but these infants with ACE D/D genotype might be at risk for the development of cardiovascular disorders later in life.


Subject(s)
Peptidyl-Dipeptidase A/genetics , Polymorphism, Genetic , Respiratory Distress Syndrome, Newborn/genetics , Female , Gene Deletion , Genotype , Humans , Infant, Newborn , Infant, Premature , Intensive Care Units, Neonatal , Male , Risk
19.
Pediatr Endocrinol Rev ; 4(3): 210-7, 2007 Mar.
Article in English | MEDLINE | ID: mdl-17551482

ABSTRACT

The most complicated group of sexual differentiation disorders is that of gonadal development. Disorders of gonadal development form a wide clinical, cytogenetic and histopathological spectrum. There are still some unsolved difficulties of diagnosis, development of malignancy and the sex rearing of these patients. We reviewed 23 cases of gonadal developmental disorders among 169 patients with ambiguous genitalia or delayed puberty. Among 169 patients, 87 patients were 46,XY disorders of sex development (DSD), 59 patients were 46,XX DSD without disorders of gonadal development and the remaining 23 patients had disorders of gonadal development. Nine of these 23 patients were diagnosed as 46,XY gonadal dysgenesis, 7 patients had ovotesticular DSD, 5 patients had 45,X/46,XY mixed gonadal dysgenesis. Fourteen patients with disorders of gonadal development had genital ambiguity, 5 patients had a female genital phenotype with a palpable gonad and/or delayed puberty. Four patients had the male genital phenotype. Disorder of gonadal development is a very important clinical problem with different aspects of diagnosis, treatment, rearing sex and prophylaxis. Each patient should be evaluated individually employing a multidiciplinary approach.


Subject(s)
Gonadal Dysgenesis, 46,XX/genetics , Gonadal Dysgenesis, 46,XY/genetics , Ovary/pathology , Testis/pathology , Adolescent , Child , Child, Preschool , Diagnosis, Differential , Female , Gonadal Dysgenesis, 46,XX/pathology , Gonadal Dysgenesis, 46,XY/pathology , Humans , Infant , Infant, Newborn , Karyotyping/methods , Male , Prognosis , Sex Determination Analysis/methods
20.
Turk J Haematol ; 34(2): 151-158, 2017 Jun 05.
Article in English | MEDLINE | ID: mdl-28179212

ABSTRACT

OBJECTIVE: Glucocorticoids (GCs) are the key drugs for the treatment of pediatric acute lymphoblastic leukemia (ALL). Herein, investigation of the relationship between the N363S and BclI polymorphisms of the GC receptor gene (NR3C1) and the side effects of GCs during pediatric ALL therapy was aimed. MATERIALS AND METHODS: N363S and BclI polymorphisms were analyzed in 49 patients with ALL treated between 2000 and 2012. The control group consisted of 46 patients with benign disorders. The side effects of GCs noted during the induction and reinduction periods were evaluated retrospectively according to the National Cancer Institute's Common Terminology Criteria for Adverse Events, version 4.0. RESULTS: The BclI allele and genotype frequencies were found similar in the two groups. No N363S polymorphism was detected in either of the groups. During induction, dyspepsia was found more frequently in the CG than in the CC (wild-type) genotype (36.4% vs. 5.3%, p=0.018) and depression symptoms more frequent in patients with the G allele (CG+GG) than the CC genotype (39.3% vs. 10.5%, p=0.031). During reinduction, Cushingoid changes, dyspepsia, and depression symptoms were more frequent in patients with the G allele (CG+GG) than in patients with the CC genotype (48.1% vs. 17.6%, p=0.041; 29.6% vs. 0.0%, p=0.016; 40.7% vs. 11.8%, p=0.040, respectively). CONCLUSION: In our study, patients with the BclI polymorphism were found to have developed more frequent side effects. We think that the BclI polymorphism should be considered while designing individualized therapies in childhood ALL.


Subject(s)
Glucocorticoids/administration & dosage , Glucocorticoids/adverse effects , Polymorphism, Restriction Fragment Length , Precursor Cell Lymphoblastic Leukemia-Lymphoma/drug therapy , Precursor Cell Lymphoblastic Leukemia-Lymphoma/genetics , Receptors, Glucocorticoid/genetics , Adolescent , Child , Child, Preschool , Female , Humans , Infant , Male , Retrospective Studies
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