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1.
J Am Chem Soc ; 146(17): 11679-11693, 2024 May 01.
Article in English | MEDLINE | ID: mdl-38482849

ABSTRACT

Lipid nanoparticles (LNPs)-based messenger RNA (mRNA) therapeutics have emerged with promising potentials in the fields of infectious diseases, cancer vaccines, and protein replacement therapies; however, their therapeutic efficacy and safety can still be promoted by the optimization of LNPs formulations. Unfortunately, current LNPs suffer from increased production of reactive oxygen species during translation, which leads to a decreased translation efficiency and the onset of inflammation and other side effects. Herein, we synthesize a lipid-modified poly(guanidine thioctic acid) polymer to fabricate novel LNPs for mRNA vaccines. The acquired G-LNPs significantly promote the translation efficiency of loaded mRNA and attenuate inflammation after vaccination through the elimination of reactive oxygen species that are responsible for translational inhibition and inflammatory responses. In vivo studies demonstrate the excellent antitumor efficacy of the G-LNPs@mRNA vaccine, and two-dose vaccination dramatically increases the population and infiltration of cytotoxic T cells due to the intense antitumor immune responses, thus generating superior antitumor outcomes compared with the mRNA vaccine prepared from traditional LNPs. By synergy with immune checkpoint blockade, the tumor inhibition of G-LNPs@mRNA is further boosted, indicating that G-LNPs-based mRNA vaccines will be powerful and versatile platforms to combat cancer.


Subject(s)
Cancer Vaccines , Lipids , Liposomes , Nanoparticles , RNA, Messenger , Cancer Vaccines/chemistry , Cancer Vaccines/immunology , Nanoparticles/chemistry , Animals , Mice , RNA, Messenger/genetics , RNA, Messenger/immunology , Lipids/chemistry , Humans , Thioctic Acid/chemistry , Thioctic Acid/pharmacology , Polymers/chemistry , Guanidines/chemistry , Guanidines/pharmacology , Cell Line, Tumor
2.
Nucleic Acids Res ; 50(W1): W66-W74, 2022 07 05.
Article in English | MEDLINE | ID: mdl-35639514

ABSTRACT

It is of vital importance to understand the population structure, dissect the genetic bases of performance traits, and make proper strategies for selection in breeding programs. However, there is no single webserver covering the specific needs in aquaculture. We present Aquaculture Molecular Breeding Platform (AMBP), the first web server for genetic data analysis in aquatic species of farming interest. AMBP integrates the haplotype reference panels of 18 aquaculture species, which greatly improves the accuracy of genotype imputation. It also supports multiple tools to infer genetic structures, dissect the genetic architecture of performance traits, estimate breeding values, and predict optimum contribution. All the tools are coherently linked in a web-interface for users to generate interpretable results and evaluate statistical appropriateness. The webserver supports standard VCF and PLINK (PED, MAP) files, and implements automated pipelines for format transformation and visualization to simplify the process of analysis. As a demonstration, we applied the webserver to Pacific white shrimp and Atlantic salmon datasets. In summary, AMBP constitutes comprehensive resources and analytical tools for exploring genetic data and guiding practical breeding programs. AMBP is available at http://mgb.qnlm.ac.


Subject(s)
Aquaculture , DNA Shuffling , Polymorphism, Single Nucleotide , Software , Aquaculture/methods , Genotype , Phenotype , Animals , Breeding , Internet
3.
Angew Chem Int Ed Engl ; 63(13): e202318515, 2024 Mar 22.
Article in English | MEDLINE | ID: mdl-38320193

ABSTRACT

Insufficient accumulation of lipid nanoparticles (LNPs)-based mRNA vaccines in antigen presenting cells remains a key barrier to eliciting potent antitumor immune responses. Herein, we develop dendritic cells (DCs) targeting LNPs by taking advantage of mannose receptor-mediated endocytosis. Efficient delivery of mRNA to DCs is achieved in vitro and in vivo utilizing the sweet LNPs (STLNPs-Man). Intramuscular injection of mRNA vaccine (STLNPs-Man@mRNAOVA ) results in a four-fold higher uptake by DCs in comparison with commercially used LNPs. Benefiting from its DCs targeting ability, STLNPs-Man@mRNAOVA significantly promotes the antitumor performances, showing a comparable therapeutic efficacy by using one-fifth of the injection dosage as the vaccine prepared from normal LNPs, thus remarkably avoiding the side effects brought by conventional mRNA vaccines. More intriguingly, STLNPs-Man@mRNAOVA exhibits the ability to downregulate the expression of cytotoxic T-lymphocyte-associated protein 4 on T cells due to the blockade of CD206/CD45 axis, showing brilliant potentials in promoting antitumor efficacy combined with immune checkpoint blockade therapy.


Subject(s)
Cancer Vaccines , Liposomes , Nanoparticles , Neoplasms , Humans , Antigen Presentation , mRNA Vaccines , RNA, Messenger/genetics , RNA, Messenger/metabolism , Dendritic Cells/metabolism , Neoplasms/therapy , Neoplasms/metabolism
4.
J Neurosci ; 2022 Aug 18.
Article in English | MEDLINE | ID: mdl-35985835

ABSTRACT

Traumatic brain injury (TBI) triggers a plethora of inflammatory events in the brain that aggravate secondary injury and impede tissue repair. Resident microglia (Mi) and blood-borne infiltrating macrophages (MΦ) are major players of inflammatory responses in the post-TBI brain and possess high functional heterogeneity. However, the plasticity of these cells has yet to be exploited to develop therapies that can mitigate brain inflammation and improve the outcome after TBI. This study investigated the transcription factor STAT1 as a key determinant of proinflammatory Mi/MΦ responses and aimed to develop STAT1 as a novel therapeutic target for TBI using a controlled cortical impact model of TBI on adult male mice. TBI induced robust upregulation of STAT1 in the brain at the subacute injury stage, which occurred primarily in Mi/MΦ. Intraperitoneal administration of fludarabine, a selective STAT1 inhibitor, markedly alleviated proinflammatory Mi/MΦ responses and brain inflammation burden after TBI. Such phenotype-modulating effects of fludarabine on post-TBI Mi/MΦ were reproduced by tamoxifen-induced, selective knockout of STAT1 in Mi/MΦ (STAT1 mKO). By propelling Mi/MΦ away from a detrimental proinflammatory phenotype, STAT1 mKO was sufficient to reduce long-term neurological deficits and brain lesion size after TBI. Importantly, short-term fludarabine treatment after TBI elicited long-lasting improvement of TBI outcomes, but this effect was lost on STAT1 mKO mice. Together, our study provided the first line of evidence that STAT1 causatively determines the proinflammatory phenotype of brain Mi/MΦ after TBI. We also showed promising preclinical data supporting the use of fludarabine as a novel immunomodulating therapy to TBI.SIGNIFICANCE STATEMENTThe functional phenotype of microglia and macrophages (Mi/MΦ) critically influences brain inflammation and the outcome after traumatic brain injury (TBI); however, no therapies have been developed to modulate Mi/MΦ functions to treat TBI. Here we report for the first time that the transcription factor STAT1 is a key mediator of proinflammatory Mi/MΦ responses in the post-TBI brain, the specific deletion of which ameliorates neuroinflammation and improves long-term functional recovery after TBI. We also show excellent efficacy of a selective STAT1 inhibitor fludarabine against TBI-induced functional deficits and brain injury using a mouse model, presenting STAT1 as a promising therapeutic target for TBI.

5.
Neurobiol Dis ; 180: 106078, 2023 05.
Article in English | MEDLINE | ID: mdl-36914076

ABSTRACT

Traumatic brain injury (TBI) is commonly followed by intractable psychiatric disorders and long-term changes in affect, such as anxiety. The present study sought to investigate the effect of repetitive intranasal delivery of interleukin-4 (IL-4) nanoparticles on affective symptoms after TBI in mice. Adult male C57BL/6 J mice (10-12 weeks of age) were subjected to controlled cortical impact (CCI) and assessed by a battery of neurobehavioral tests up to 35 days after CCI. Neuron numbers were counted in multiple limbic structures, and the integrity of limbic white matter tracts was evaluated using ex vivo diffusion tensor imaging (DTI). As STAT6 is a critical mediator of IL-4-specific transcriptional activation, STAT6 knockout mice were used to explore the role of endogenous IL-4/STAT6 signaling axis in TBI-induced affective disorders. We also employed microglia/macrophage (Mi/Mϕ)-specific PPARγ conditional knockout (mKO) mice to test if Mi/Mϕ PPARγ critically contributes to IL-4-afforded beneficial effects. We observed anxiety-like behaviors up to 35 days after CCI, and these measures were exacerbated in STAT6 KO mice but mitigated by repetitive IL-4 delivery. We discovered that IL-4 protected against neuronal loss in limbic structures, such as the hippocampus and the amygdala, and improved the structural integrity of fiber tracts connecting the hippocampus and amygdala. We also observed that IL-4 boosted a beneficial Mi/Mϕ phenotype (CD206+/Arginase 1+/PPARγ+ triple-positive) in the subacute injury phase, and that the numbers of Mi/Mϕ appositions with neurons were robustly correlated with long-term behavioral performances. Remarkably, PPARγ-mKO completely abolished IL-4-afforded protection. Thus, CCI induces long-term anxiety-like behaviors in mice, but these changes in affect can be attenuated by transnasal IL-4 delivery. IL-4 prevents the long-term loss of neuronal somata and fiber tracts in key limbic structures, perhaps due to a shift in Mi/Mϕ phenotype. Exogenous IL-4 therefore holds promise for future clinical management of mood disturbances following TBI.


Subject(s)
Brain Injuries, Traumatic , Microglia , Mice , Male , Animals , PPAR gamma , Interleukin-4 , Diffusion Tensor Imaging , Mice, Inbred C57BL , Mice, Knockout , Anxiety/etiology , Neurons
6.
Altern Ther Health Med ; 29(8): 608-612, 2023 Nov.
Article in English | MEDLINE | ID: mdl-37678862

ABSTRACT

Objective: To identify messenger RNAs (mRNAs) with differential expression in allergic rhinitis (AR) based on an online database, Gene Expression Omnibus (GEO), to provide a new research direction for future diagnosis and treatment of AR. Methods: The GSE44037 dataset from the CEO database was selected to obtain differentially expressed mRNAs (DEmRNAs) in AR. The keywords involved in these DEmRNAs were enriched and analyzed, and ECM1 and CCL2 were selected for subsequent analysis. In addition, BALB/c mice were purchased and randomized to control (normal feeding), model (AR modeling), si-CCL2 (AR modeling + CCL2 suppression by lentivirus vector), nc-CCL2 (AR modeling + CCL2 empty vector), si-ECM1 (AR modeling + ECM1 suppression by lentivirus vector), and nc-ECM1 (AR modeling + ECM1 empty vector) groups. The frequencies of sneezing and nasal rubbing were recorded in each group. Besides, levels of CCL2, ECM1, interleukin (IL)-6, IL-8, tumor necrosis factor (TNF)-α, and high sensitivity C-reactive protein (hs-CRP) were quantified, and the inflammatory infiltration of nasal mucosa (NM) was observed. Results: Twenty-six DEmRNAs were acquired from the GSE44037 dataset, among which only CCL2 and ECM1 were found to be associated with keywords such as "immune response" and "inflammatory response" through enrichment analysis. In animal experiments, CCL2 presented lower mRNA expression in model mice than in control mice, while ECM1 showed higher mRNA expression (P < .05). The frequencies of sneezing and nose rubbing and the levels of inflammatory factors were significantly increased in si-CCL2 mice compared with model mice, while were significantly decreased in si-ECM1 mice (P < .05). The NM inflammatory infiltration was serious in the si-CCL2 group and significantly improved in the si-ECM1 group. Conclusions: Low expression of CCL2 and high expression of ECM1 in AR are strongly linked to the pathological progression of AR, and these two genes are expected to be new research directions for AR diagnosis and treatment.


Subject(s)
Rhinitis, Allergic , Sneezing , Animals , Mice , Disease Models, Animal , Mice, Inbred BALB C , Nasal Mucosa/metabolism , Nasal Mucosa/pathology , Rhinitis, Allergic/genetics , RNA, Messenger/pharmacology
7.
Genomics ; 114(4): 110426, 2022 07.
Article in English | MEDLINE | ID: mdl-35820495

ABSTRACT

High-throughput single nucleotide polymorphism (SNP) genotyping assays are powerful tools for genetic studies and genomic breeding applications for many species. Though large numbers of SNPs have been identified in sea cucumber (Apostichopus japonicus), but, as yet, no high-throughput genotyping platform is available for this species. In this study, we designed and developed a high-throughput 24 K SNP genotyping array named HaishenSNP24K for A. japonicus, based on the multi-objective-local optimization (MOLO) algorithm and HD-Marker genotyping method. The SNP array exhibited a relatively high genotyping call rate (> 96%), genotyping accuracy (>95%) and exhibited highly polymorphic in sea cucumber populations. In addition, we also assessed its application in genomic selection (GS). Deep neural networks (DNN) that can capture the complicated interactions of genes have been proposed as a promising tool in GS for SNP-based genomic prediction of complex traits in animal breeding. To overcome the problem of over-fitting when using the HaishenSNP24K array as high-dimensional DNN input, we developed minmax concave penalty (MCP) regularization for sparse deep neural networks (DNN-MCP) that finds an optimal sparse structure of a DNN by minimizing the square error subject to the non-convex penalty MCP on the parameters (weights and biases). Compared to two linear models, namely RR-GBLUP and Bayes B, and the nonlinear model DNN, DNN-MCP has greatly improved the genomic prediction ability for three quantitative traits (e.g., wet weight, dry weight and survival time) in the sea cucumber population. To the best of our knowledge, this is the first work to develop a high-throughput SNP array for A. japonicus and a new model DNN-MCP for genomic prediction of complex traits in GS. The present results provide evidence that supports the HaishenSNP24K array with DNN-MCP will be valuable for genetic studies and molecular breeding in A. japonicus.


Subject(s)
Sea Cucumbers , Stichopus , Animals , Bayes Theorem , Genomics/methods , Genotype , Neural Networks, Computer , Polymorphism, Single Nucleotide , Sea Cucumbers/genetics
8.
J Neuroinflammation ; 19(1): 201, 2022 Aug 06.
Article in English | MEDLINE | ID: mdl-35933343

ABSTRACT

BACKGROUND: Histone deacetylases (HDACs) are believed to exacerbate traumatic brain injury (TBI) based on studies using pan-HDAC inhibitors. However, the HDAC isoform responsible for the detrimental effects and the cell types involved remain unknown, which may hinder the development of specific targeting strategies that boost therapeutic efficacy while minimizing side effects. Microglia are important mediators of post-TBI neuroinflammation and critically impact TBI outcome. HDAC3 was reported to be essential to the inflammatory program of in vitro cultured macrophages, but its role in microglia and in the post-TBI brain has not been investigated in vivo. METHODS: We generated HDAC3LoxP mice and crossed them with CX3CR1CreER mice, enabling in vivo conditional deletion of HDAC3. Microglia-specific HDAC3 knockout (HDAC3 miKO) was induced in CX3CR1CreER:HDAC3LoxP mice with 5 days of tamoxifen treatment followed by a 30-day development interval. The effects of HDAC3 miKO on microglial phenotype and neuroinflammation were examined 3-5 days after TBI induced by controlled cortical impact. Neurological deficits and the integrity of white matter were assessed for 6 weeks after TBI by neurobehavioral tests, immunohistochemistry, electron microscopy, and electrophysiology. RESULTS: HDAC3 miKO mice harbored specific deletion of HDAC3 in microglia but not in peripheral monocytes. HDAC3 miKO reduced the number of microglia by 26%, but did not alter the inflammation level in the homeostatic brain. After TBI, proinflammatory microglial responses and brain inflammation were markedly alleviated by HDAC3 miKO, whereas the infiltration of blood immune cells was unchanged, suggesting a primary effect of HDAC3 miKO on modulating microglial phenotype. Importantly, HDAC3 miKO was sufficient to facilitate functional recovery for 6 weeks after TBI. TBI-induced injury to axons and myelin was ameliorated, and signal conduction by white matter fiber tracts was significantly enhanced in HDAC3 miKO mice. CONCLUSION: Using a novel microglia-specific conditional knockout mouse model, we delineated for the first time the role of microglial HDAC3 after TBI in vivo. HDAC3 miKO not only reduced proinflammatory microglial responses, but also elicited long-lasting improvement of white matter integrity and functional recovery after TBI. Microglial HDAC3 is therefore a promising therapeutic target to improve long-term outcomes after TBI.


Subject(s)
Brain Injuries, Traumatic , Histone Deacetylases , White Matter , Animals , Brain Injuries, Traumatic/metabolism , Disease Models, Animal , Histone Deacetylases/metabolism , Inflammation/metabolism , Mice , Mice, Inbred C57BL , Mice, Knockout , Microglia/metabolism , White Matter/metabolism
9.
Int J Legal Med ; 132(6): 1537-1544, 2018 Nov.
Article in English | MEDLINE | ID: mdl-29455339

ABSTRACT

Schizophrenia is a severe mental disorder, and its mechanisms have not been fully elucidated. A functional single nucleotide polymorphism (SNP) present in the catechol-O-methyltransferase (COMT) gene, Val158Met (rs4680) (Chr22: 19,963,498), is possibly related to the violent behavior of schizophrenia patients. However, the specific variant that causes violent behavior is still unknown. Since the Val variation of Val158Met (rs4680) introduces a CG site into the sequence, the methylation level of the Val158Met (rs4680) region may also have an association with the homicidal behavior of schizophrenia patients. A case-control study was conducted that included 100 normal males, 100 schizophrenia inpatients, and 100 schizophrenia inpatients with homicidal behavior. A polymorphism of Val158Met (rs4680) and the methylation levels were analyzed by pyrosequencing. Compared to Met carriers, the Val/Val genotype was significantly associated with the homicidal behavior of schizophrenia patients. In addition, the methylation levels of the Val158Met (rs4680) region were significantly different between the three groups. Moreover, the methylation level of an rs4680-related CpG site was significantly associated with the Val/Val genotype which may contribute to the homicidal behavior of schizophrenia patients. In this study, we showed that the Val allele at Val158Met (rs4680) may be associated with the homicidal behavior of schizophrenia patients as well as that the methylation level of Val158Met (rs4680) could be affected by the variation of Val158Met (rs4680) and eventually contribute to the violent behavior of schizophrenia patients.


Subject(s)
Catechol O-Methyltransferase/genetics , DNA Methylation , Polymorphism, Single Nucleotide , Schizophrenia/genetics , Adolescent , Adult , Alleles , Asian People/genetics , Case-Control Studies , China , CpG Islands/genetics , Genotype , Homicide , Humans , Male , Middle Aged , Young Adult
10.
Fish Shellfish Immunol ; 80: 141-147, 2018 Sep.
Article in English | MEDLINE | ID: mdl-29879509

ABSTRACT

Cathepsin F is a unique papain cysteine proteinase with highly conserved structures: catalytic triad and a cystatin domain contained in the elongated N-terminal pro-region. It has been reported that cathepsin F is associated with the establishment of innate immune in several vertebrate including fish in aquaculture, but not known in bivalves. In this study, we firstly identified and characterized cathepsin F in the Yesso scallop (Patinopecten yessoensis). The protein structural and phylogenetic analyses were then conducted to determine its identity and evolutionary position. We've also investigated the expression levels of cathepsin F gene at different embryonic developmental stages, in healthy adult tissues and especially in the hemocytes and hepatopancreas after Gram-positive (Micrococcus luteus) and negative (Vibrio anguillarum) challenges using quantitative real-time PCR (qPCR). Cathepsin F was significantly up-regulated 3 h after infection of V. anguillarum in hemocytes, suggesting its participation in immune response. Our findings have provided strong evidence that cathepsin F may be a good target for enhancing the immune activity in Yesso scallop.


Subject(s)
Cathepsin F , Gram-Positive Bacterial Infections/immunology , Pectinidae/genetics , Pectinidae/immunology , Vibrio Infections/immunology , Amino Acid Sequence , Animals , Cathepsin F/chemistry , Cathepsin F/genetics , Cathepsin F/immunology , Gram-Positive Bacterial Infections/veterinary , Hemocytes/immunology , Hepatopancreas/immunology , Micrococcus luteus , Phylogeny , Protein Structure, Secondary , Protein Structure, Tertiary , RNA, Messenger/genetics , Vibrio , Vibrio Infections/veterinary
11.
Neural Netw ; 169: 532-541, 2024 Jan.
Article in English | MEDLINE | ID: mdl-37948971

ABSTRACT

A proposed method, Enhancement, integration, and Expansion, aims to activate the representation of detailed features for occluded person re-identification. Region and context are two important and complementary features, and integrating them in an occluded environment can effectively improve the robustness of the model. Firstly, a self-enhancement module is designed. Based on the constructed multi-stream architecture, rich and meaningful feature interference is introduced in the feature extraction stage to enhance the model's ability to perceive noise. Next, a collaborative integration module similar to cascading cross-attention is proposed. By studying the intrinsic interaction patterns of regional and contextual features, it adaptively fuses features across streams and enhances the diverse and complete representation of internal information. The module is not only robust to complex occlusions, but also mitigates the feature interference problem due to similar appearances or scenes. Finally, a matching expansion module that enhances feature discriminability and completeness is proposed. Providing more stable and accurate features for recognition. Compared with state-of-the-art methods on two occluded and holistic datasets, the proposed method is proved to be advanced and the effectiveness of the module is proved by extensive ablation studies.


Subject(s)
Biometric Identification , Neural Networks, Computer , Humans
12.
Neural Netw ; 173: 106210, 2024 May.
Article in English | MEDLINE | ID: mdl-38417353

ABSTRACT

Modern industrial processes are characterized by extensive, multiple operation units, and strong coupled correlation of subsystems. Fault detection of large-scale processes is still a challenging problem, especially for tandem plant-wide processes in multiple fields such as water treatment process. In this paper, a novel distributed graph attention network-bidirectional long short-term memory (D-GATBLSTM) fault detection model is proposed for large-scale industrial processes. Firstly, a multi-node knowledge graph (MNKG) is constructed using a joint data and knowledge driven strategy. Secondly, for large-scale industrial process, a global feature extractor of graph attention networks (GATs) is constructed, on the basis of which, sub-blocks are decomposed based on MNKG. Then, local feature extractors of bidirectional long short-term memory (Bi-LSTM) for each sub-block are constructed, in which correlations among multiple sub-blocks are considered. Finally, a multi-subblock fusion collaborative prediction model is constructed and the comprehensive fault detection results are given by the grid search method. The effectiveness of our D-GATBLSTM is exemplified in a secure water treatment process case, where it outperforms baseline models compared, with 27% improvement in precision, 15% increase in recall, and overall F-score enhancement of 0.22.


Subject(s)
Computer Systems , Pattern Recognition, Automated , Knowledge , Memory, Long-Term , Mental Recall
13.
Adv Mater ; 36(23): e2311574, 2024 Jun.
Article in English | MEDLINE | ID: mdl-38433564

ABSTRACT

Dendritic cell (DC) maturation is a crucial process for antigen presentation and the initiation of T cell-mediated immune responses. Toll-like receptors play pivotal roles in stimulating DC maturation and promoting antigen presentation. Here, a novel message RNA (mRNA) cancer vaccine is reported that boosts antitumor efficacy by codelivering an mRNA encoding tumor antigen and a TLR7/8 agonist (R848) to DC using supramolecular lipid nanoparticles (SMLNP) as a delivery platform, in which a new ionizable lipid (N2-3L) remarkably enhances the translation efficiency of mRNA and a ß-cyclodextrin (ß-CD)-modified ionizable lipid (Lip-CD) encapsulates R848. The incorporation of R848 adjuvant into the mRNA vaccine through noncovalent host-guest complexation significantly promotes DC maturation and antigen presentation after vaccination, thus resulting in superior antitumor efficacy in vivo. Moreover, the antitumor efficacy is further boosted synergized with immune checkpoint blockade by potentiating the anticancer capability of cytotoxic T lymphocytes infiltrated in tumor sites. This work indicates that SMLNP shows brilliant potential as next-generation delivery system in the development of mRNA vaccines with high efficacy.


Subject(s)
Cancer Vaccines , Dendritic Cells , Imidazoles , Immunotherapy , Lipids , Nanoparticles , Toll-Like Receptor 7 , Toll-Like Receptor 8 , Animals , Nanoparticles/chemistry , Cancer Vaccines/chemistry , Cancer Vaccines/immunology , Dendritic Cells/immunology , Mice , Lipids/chemistry , Imidazoles/chemistry , mRNA Vaccines/chemistry , beta-Cyclodextrins/chemistry , RNA, Messenger/genetics , RNA, Messenger/chemistry , Neoplasms/therapy , Cell Line, Tumor , Antigens, Neoplasm/immunology , Humans , Mice, Inbred C57BL , Liposomes
14.
Sci Adv ; 10(10): eade6900, 2024 Mar 08.
Article in English | MEDLINE | ID: mdl-38446877

ABSTRACT

The accumulation of self-renewed polarized microglia in the penumbra is a critical neuroinflammatory process after ischemic stroke, leading to secondary demyelination and neuronal loss. Although known to regulate tumor cell proliferation and neuroinflammation, HDAC3's role in microgliosis and microglial polarization remains unclear. We demonstrated that microglial HDAC3 knockout (HDAC3-miKO) ameliorated poststroke long-term functional and histological outcomes. RNA-seq analysis revealed mitosis as the primary process affected in HDAC3-deficent microglia following stroke. Notably, HDAC3-miKO specifically inhibited proliferation of proinflammatory microglia without affecting anti-inflammatory microglia, preventing microglial transition to a proinflammatory state. Moreover, ATAC-seq showed that HDAC3-miKO induced closing of accessible regions enriched with PU.1 motifs. Overexpressing microglial PU.1 via an AAV approach reversed HDAC3-miKO-induced proliferation inhibition and protective effects on ischemic stroke, indicating PU.1 as a downstream molecule that mediates HDAC3's effects on stroke. These findings uncovered that HDAC3/PU.1 axis, which mediated differential proliferation-related reprogramming in different microglia populations, drove poststroke inflammatory state transition, and contributed to pathophysiology of ischemic stroke.


Subject(s)
Ischemic Stroke , Stroke , Microglia , Stroke/genetics , Cell Proliferation , Seeds
15.
Heliyon ; 9(3): e13835, 2023 Mar.
Article in English | MEDLINE | ID: mdl-36895368

ABSTRACT

Due to the advantageous characteristics of laser welding technology, it is being increasingly used for constructing stainless steel rail vehicles. It can improve the appearance of a vehicle, enable designs with a relatively high degree of flatness, and ensure higher-quality connections between different parts of a vehicle. Moreover, it can improve the strength and stiffness of the components of the vehicle. In this study, a large-scale assembly module of a stainless steel side-wall was considered as the research object. The combined heat source model of a Gaussian heat source and a cylindrical volume heat source was used to obtain the heat source parameters of laser welding to match the experimental data. Based on the thermal cycle curve method (TCCM), the influence of the number of weld segments and mesh divisions of the local model on the efficiency and accuracy of laser welding simulations was investigated. Thereafter, the research results were applied to the welding simulation of the whole side-wall module. The shape of the molten pool obtained using the combined heat source was closer to that of the experiments (error < 10%), demonstrating the accuracy and effectiveness of the developed the heat source model for laser welding simulation. For local model laser welding using the TCCM, a coarse mesh was used, and the weld was divided into four segments, and highly accurate results were obtained. This calculation time was only 5.97% of that of a moving heat source in case of the thermo-elastic-plastic method (TEPM). Residual stress and welding deformation of the stainless steel side-wall module were calculated according to actual process parameters and the results of local model simulation. Residual stress was discontinuously distributed at the weld segments, and it only slightly influenced the overall stress distribution. The maximum residual stress (462.15 MPa) occurred at the weld of the large crossbeam. Welding eight small and two large crossbeams influenced the deformation change and the maximum deformation (1.26 mm) appeared in the middle position of the left side-wall. The findings of this study show that the TCCM has high calculation accuracy and is sufficiently economical for predicting laser welding of large structures.

16.
J Cereb Blood Flow Metab ; : 271678X231197173, 2023 Dec 09.
Article in English | MEDLINE | ID: mdl-38069842

ABSTRACT

The Class-I histone deacetylases (HDACs) mediate microglial inflammation and neurological dysfunction after traumatic brain injury (TBI). However, whether the individual Class-I HDACs play an indispensable role in TBI pathogenesis remains elusive. HDAC2 has been shown to upregulate pro-inflammatory genes in myeloid cells under brain injuries such as intracerebral hemorrhage, thereby worsening outcomes. Thus, we hypothesized that HDAC2 drives microglia toward a pro-inflammatory neurotoxic phenotype in a murine model of controlled cortical impact (CCI). Our results revealed that HDAC2 expression was highly induced in CD16/CD32+ pro-inflammatory microglia 3 and 7d after TBI. Surprisingly, microglia-targeted HDAC2 knockout (HDAC2 miKO) mice failed to demonstrate a beneficial phenotype after CCI/TBI compared to their wild-type (WT) littermates. HDAC2 miKO mice exhibited comparable levels of grey and white matter injury, efferocytosis, and sensorimotor and cognitive deficits after CCI/TBI as WT mice. RNA sequencing of isolated microglia 3d after CCI/TBI indicated the elevation of a panel of pro-inflammatory cytokines/chemokines in HDAC2 miKO mice over WT mice, and flow cytometry showed further elevated brain infiltration of neutrophils and B cells in HDAC2 miKO mice. Together, this study does not support a detrimental role for HDAC2 in microglial responses after TBI and calls for investigation into alternative mechanisms.

17.
IEEE Trans Cybern ; 52(5): 2687-2697, 2022 May.
Article in English | MEDLINE | ID: mdl-33001822

ABSTRACT

This article studies the practical exponential stability of impulsive stochastic reaction-diffusion systems (ISRDSs) with delays. First, a direct approach and the Lyapunov method are developed to investigate the p th moment practical exponential stability and estimate the convergence rate. Note that these two methods can also be used to discuss the exponential stability of systems in certain conditions. Then, the practical stability results are successfully applied to the impulsive reaction-diffusion stochastic Hopfield neural networks (IRDSHNNs) with delays. By the illustration of four numerical examples and their simulations, our results in this article are proven to be effective in dealing with the problem of practical exponential stability of ISRDSs with delays, and may be regarded as stabilization results.


Subject(s)
Algorithms , Neural Networks, Computer , Diffusion , Stochastic Processes , Time Factors
18.
J Cereb Blood Flow Metab ; 42(11): 2161-2163, 2022 11.
Article in English | MEDLINE | ID: mdl-35942567

ABSTRACT

A recent study by Bisht, Okojie, and Sharma, et al. characterizes a population of capillary-associated microglia (CAM) whose cell bodies are positioned along small blood vessels in the healthy mouse brain. Through elegant, longitudinal intravital imaging of brain vasculature and CAMs, the authors have uncovered the significance of microglia in cerebral blood flow regulation. Further investigation into the functions of this CAM population and how they interact with surrounding cells within the neurovascular unit will improve our understanding of vascular regulation and cerebrovascular diseases.


Subject(s)
Microglia , Pericytes , Animals , Blood-Brain Barrier/metabolism , Brain/blood supply , Capillaries/diagnostic imaging , Humans , Mice , Pericytes/metabolism
19.
Materials (Basel) ; 15(16)2022 Aug 11.
Article in English | MEDLINE | ID: mdl-36013651

ABSTRACT

The melting and solidification process of S32101 duplex stainless steel (DSS) was investigated using high-temperature confocal microscopy (HTCM). The method of concentric HTCM was employed to study microstructure evolution during the solidification process of S32101 DSS. This method could artificially create a meniscus-shaped solid-liquid interface, which dramatically improved the quality of in situ observations. During the heating stage, γ-austenite transformed to δ-ferrite, and this transformation manifested itself in the form of grain boundaries (GBs) moving. The effects of cooling rate on the solidification pattern and microstructure were revealed in the present research. An enhanced cooling rate led to a finer microstructure, and the solidification pattern changed from cellular to dendritic growth. As the temperature decreased, the commencement and growth of precipitates were observed. In this paper, the experimental data, including parameters such as temperature, cooling rate, and growth mode, were used as the benchmark for the simulation. A simulation framework using Micress linked to a 1D heat transfer model enabling consistent analysis of solidification dynamics in DSS across the whole cast slab was established. Simulating the dendrite growth and elemental segregation of DSS at specific cooling rates shows that this framework can be a powerful tool for solving practical production problems.

20.
Food Chem ; 389: 133033, 2022 Sep 30.
Article in English | MEDLINE | ID: mdl-35490516

ABSTRACT

Sea cucumber collagen (SCC) properties affected the thermal processing of sea cucumber. SCC showed the shear-thinning and pseudo-plastic properties, and the viscosity and frequency of viscoelastic crossover were decreased gradually with the temperature from 15 to 30 °C. Differential scanning calorimetry of SCC confirmed that it was thermolabile with the increase of temperatures, acid or NaCl concentrations. As the temperature increasing, the triple helix of SCC disappeared with the decrease of the relative proportion of P2 structures by circular dichroism spectrometry and Fourier transform infrared spectroscopy, and shearing could accelerate the change. Intramolecular changes investigated by molecular dynamics simulation showed the average number of hydrogen bonds decreased from 47 (20 °C) to 42 (80 °C), indicating triple helix of SCC was triggered to uncoil within 250 ns. These results could provide a scientific basis for processing of sea cucumbers.


Subject(s)
Sea Cucumbers , Animals , Collagen/chemistry , Rheology , Sea Cucumbers/chemistry , Spectroscopy, Fourier Transform Infrared , Temperature
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