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1.
J Cell Mol Med ; 28(12): e18490, 2024 Jun.
Article in English | MEDLINE | ID: mdl-38923119

ABSTRACT

Studies have reported variable effects of sex hormones on serious diseases. Severe disease and mortality rates in COVID-19 show marked gender differences that may be related to sex hormones. Sex hormones regulate the expression of the viral receptors ACE2 and TMPRSS2, which affect the extent of viral infection and consequently cause variable outcomes. In addition, sex hormones have complex regulatory mechanisms that affect the immune response to viruses. These hormones also affect metabolism, leading to visceral obesity and severe disease can result from complications such as thrombosis. This review presents the latest researches on the regulatory functions of hormones in viral receptors, immune responses, complications as well as their role in COVID-19 progression. It also discusses the therapeutic possibilities of these hormones by reviewing the recent findings of clinical and assay studies.


Subject(s)
Angiotensin-Converting Enzyme 2 , COVID-19 , Gonadal Steroid Hormones , SARS-CoV-2 , Serine Endopeptidases , Humans , COVID-19/virology , COVID-19/immunology , COVID-19/metabolism , COVID-19/pathology , Gonadal Steroid Hormones/metabolism , Angiotensin-Converting Enzyme 2/metabolism , Angiotensin-Converting Enzyme 2/genetics , SARS-CoV-2/metabolism , Serine Endopeptidases/metabolism , Female , Severity of Illness Index , Male
2.
Hepatology ; 78(5): 1433-1447, 2023 11 01.
Article in English | MEDLINE | ID: mdl-36800849

ABSTRACT

BACKGROUND AND AIMS: Liver fibrosis is a leading indicator for increased mortality and long-term comorbidity in NASH. Activation of HSCs and excessive extracellular matrix production are the hallmarks of liver fibrogenesis. Tyrosine kinase receptor (TrkB) is a multifunctional receptor that participates in neurodegenerative disorders. However, paucity of literature is available about TrkB function in liver fibrosis. Herein, the regulatory network and therapeutic potential of TrkB were explored in the progression of hepatic fibrosis. METHODS AND RESULTS: The protein level of TrkB was decreased in mouse models of CDAHFD feeding or carbon tetrachloride-induced hepatic fibrosis. TrkB suppressed TGF-ß-stimulated proliferation and activation of HSCs in 3-dimensional liver spheroids and significantly repressed TGF-ß/SMAD signaling pathway either in HSCs or in hepatocytes. The cytokine, TGF-ß, boosted Nedd4 family interacting protein-1 (Ndfip1) expression, promoting the ubiquitination and degradation of TrkB through E3 ligase Nedd4-2. Moreover, carbon tetrachloride intoxication-induced hepatic fibrosis in mouse models was reduced by adeno-associated virus vector serotype 6 (AAV6)-mediated TrkB overexpression in HSCs. In addition, in murine models of CDAHFD feeding and Gubra-Amylin NASH (GAN), fibrogenesis was reduced by adeno-associated virus vector serotype 8 (AAV8)-mediated TrkB overexpression in hepatocytes. CONCLUSION: TGF-ß stimulated TrkB degradation through E3 ligase Nedd4-2 in HSCs. TrkB overexpression inhibited the activation of TGF-ß/SMAD signaling and alleviated the hepatic fibrosis both in vitro and in vivo . These findings demonstrate that TrkB could be a significant suppressor of hepatic fibrosis and confer a potential therapeutic target in hepatic fibrosis.


Subject(s)
Liver Cirrhosis , Non-alcoholic Fatty Liver Disease , Transforming Growth Factor beta , Animals , Mice , Carbon Tetrachloride , Hepatic Stellate Cells/metabolism , Liver/pathology , Liver Cirrhosis/genetics , Liver Cirrhosis/metabolism , Non-alcoholic Fatty Liver Disease/genetics , Non-alcoholic Fatty Liver Disease/pathology , Receptor Protein-Tyrosine Kinases , Signal Transduction , Transforming Growth Factor beta/metabolism , Transforming Growth Factor beta1/metabolism , Ubiquitin-Protein Ligases/metabolism , Smad Proteins/genetics , Smad Proteins/metabolism
3.
Water Sci Technol ; 88(1): 1-10, 2023 Jul.
Article in English | MEDLINE | ID: mdl-37452529

ABSTRACT

The heterogeneous Fenton process is a strategy for overcoming the greatest shortcomings of traditional homogeneous Fenton, i.e. the high generation of ferric hydroxide sludge and effectivity in a limited pH range. In this study, we constructed a heterogeneous Fenton system with natural iron-bearing clay mineral (nontronite) and dimethoxyhydroquinone (DMHQ) to degrade lincomycin (LCM) without the addition of H2O2. The degradation mechanism was derived from the hydroxyl radicals (•OH) produced from the oxygenation of Fe(II) in nontronites, which was reduced by DMHQ. Acidic conditions and low concentrations of LCM were favourable for LCM degradation. When the solution pH increased from 3 to 7, the final LCM removal ratio decreased from 95 to 46%. However, LCM can still be degraded by 46% under neutral conditions and 20% at the LCM concentration of 500 µmol/L. The nontronite has good reusability, and the LCM degradation efficiency in the fourth cycle still exceeded 90% of the original efficiency. The degradation sites of LCM mainly occurred in the methyl thioether moiety and the aliphatic amine group on the pyrrolidine ring, with the final product of CO2. This research presents a new eco-friendly and cost-effective method for the heterogenous Fenton process without external H2O2.


Subject(s)
Hydroxyl Radical , Iron , Iron/chemistry , Hydroxyl Radical/chemistry , Clay , Hydrogen Peroxide/chemistry , Minerals/chemistry , Oxidation-Reduction
4.
Exp Eye Res ; 220: 109085, 2022 07.
Article in English | MEDLINE | ID: mdl-35500674

ABSTRACT

A serious form of ocular fibrotic disease is proliferative vitreoretinopathy (PVR) that can ultimately lead to blindness. While the pathogenesis of PVR is known to be closely tied to retinal pigment epithelial (RPE) cell epithelial-mesenchymal transition (EMT) characterized by E-cadherin downregulation and N-cadherin upregulation. Herein, we developed a model of transforming growth factor-ß1 (TGF-ß1)-induced EMT using human RPE (hRPE) cells as a tool for exploring the mechanistic basis for E-cadherin to N-cadherin switching. This analysis revealed that the loss of E-cadherin led to the separation of ß-catenin from the catenin-cadherin complex whereupon it underwent nuclear entry to activate zinc finger E-box binding homeobox 1 (ZEB1), in turn promoting N-cadherin upregulation in this biological context. E-cadherin overexpression was sufficient to inhibit this EMT process and proliferation in RPE cells, further constraining their TGF-ß1-induced apoptosis.


Subject(s)
Cadherins , Epithelial-Mesenchymal Transition , Transforming Growth Factor beta1 , Vitreoretinopathy, Proliferative , Antigens, CD , Cadherins/metabolism , Humans , Retinal Pigment Epithelium/metabolism , Retinal Pigments/metabolism , Transforming Growth Factor beta1/metabolism , Vitreoretinopathy, Proliferative/metabolism
5.
Macromol Rapid Commun ; 43(21): e2200419, 2022 Nov.
Article in English | MEDLINE | ID: mdl-35748664

ABSTRACT

Hydrogels are promising material candidates in engineering soft robotics, mechanical sensors, biomimetic regenerative medicine, etc. However, developing multinetwork hydrogels with high mechanical properties and excellent printability are still challenging. Here, a bifunctional phenol-enabled sequential polymerization (BPSP) strategy is reported to fabricate high-performance multinetwork hydrogels under the orthogonal catalysis of efficient ruthenium photochemistry. Benefiting from this bifunctional design, phenols can sequentially polymerize with typical monomers and themselves to fabricate various phenol-containing polymers (Ph-Ps) and Ph-Ps-based multinetwork tough hydrogels, respectively. The as-prepared hydrogels have maximum stress of 0.75 MPa and toughness of 2.2 MJ m- 3 under the critical strain of 800%. These property parameters are a maximum of 16 times higher than those of the phenol-postmodified and phenol-free hydrogels. Moreover, the rapid coupling polymerization of phenols can shorten the gelation times of hydrogels to as low as ≈4 s, which enables its printable property for customizable applications. As a proof of concept, a 3D scaffold-like structure is optimized as highly sensitive mechanical sensors for detecting various human motions.


Subject(s)
Hydrogels , Phenol , Humans , Hydrogels/chemistry , Polymerization , Polymers/chemistry
6.
J Nanobiotechnology ; 20(1): 519, 2022 Dec 09.
Article in English | MEDLINE | ID: mdl-36494806

ABSTRACT

BACKGROUND: Proliferative vitreoretinopathy (PVR) is a blind-causing disease initiated by the activation of retinal pigmented epithelium (RPE) primarily induced by TGF-ß families. Migrasome is a recently discovered type of extracellular vesicle related to cell migration. RESULTS: Here, we used ex vivo, in vitro, and in vivo models, to investigate the characteristics and functions of migrasomes in RPE activation and PVR development. Results indicated that the migrasome marker tetraspanin-4 (TSPAN4) was abundantly expressed in human PVR-associated clinical samples. The ex vivo model PVR microenvironment is simulated by incubating brown Norway rat RPE eyecups with TGF-ß1. Electron microscope images showed the formation of migrasome-like vesicles during the activation of RPE. Further studies indicated TGF-ß1 increased the expression of TSPAN4 which results in migrasome production. Migrasomes can be internalized by RPE and increase the migration and proliferation ability of RPE. Moreover, TSPAN4-inhibited RPE cells are with reduced ability of initiating experimental PVR. Mechanically, TSPAN4 expression and migrasome production are induced through TGF-ß1/Smad2/3 signaling pathway. CONCLUSION: In conclusion, migrasomes can be produced by RPE under PVR microenvironment. Migrasomes play a pivotal role in RPE activation and PVR progression. Thus, targeting TSPAN4 or blocking migrasome formation might be a new therapeutic method against PVR.


Subject(s)
Transforming Growth Factor beta1 , Vitreoretinopathy, Proliferative , Humans , Transforming Growth Factor beta1/metabolism , Epithelial-Mesenchymal Transition/physiology , Vitreoretinopathy, Proliferative/drug therapy , Vitreoretinopathy, Proliferative/metabolism , Retinal Pigment Epithelium , Cell Movement , Epithelium , Cells, Cultured
7.
Biochem Biophys Res Commun ; 515(1): 201-206, 2019 07 12.
Article in English | MEDLINE | ID: mdl-31146911

ABSTRACT

PURPOSE: Elevated levels of CXCL1 were observed in the cerebrospinal fluid of patients with early Alzheimer's disease, which may affect neural stem cells in the subventricular zone. We used APP/PS1 mice and neural stem cells to elucidate the role of CXCL1 in Alzheimer's disease. METHODS & RESULTS: We detected CXCL1 in cerebrospinal fluid (CSF), activated macrophages, and microglia suggesting that macrophages may contribute to elevated CXCL1 in the CSF of middle-aged APP/PS1 mice. Proliferation and differentiation of neural stem cells were further analyzed and the results suggested that CXCL1 promotes the proliferation of neural stem cells and inhibits their differentiation into astrocytes. In order to determine how CXCL1 exerts these effects, we analyzed intracellular reactive oxygen species, cell signaling, and performed in vivo recovery experiments. Our results suggest that CXCL1 promotes neural stem cell proliferation through a mechanism involving the production of reactive oxygen species and the PI3K/Akt pathway. CONCLUSION: In APP/PS1 mice, macrophage-derived CXCL1 can promote the proliferation of neural stem cells in the subventricular zone via the NOX2-ROS-PI3K/Akt pathway.


Subject(s)
Cell Proliferation , Chemokine CXCL1/metabolism , Disease Models, Animal , Neural Stem Cells/metabolism , Reactive Oxygen Species/metabolism , Alzheimer Disease/genetics , Alzheimer Disease/metabolism , Amyloid beta-Protein Precursor/genetics , Amyloid beta-Protein Precursor/metabolism , Animals , Chemokine CXCL1/cerebrospinal fluid , Humans , Macrophages/metabolism , Mice, Inbred C57BL , Mice, Transgenic , Neural Stem Cells/cytology , Phosphatidylinositol 3-Kinases/metabolism , Presenilin-1/genetics , Presenilin-1/metabolism , Proto-Oncogene Proteins c-akt/metabolism , Signal Transduction
8.
J Neurogenet ; 33(1): 33-40, 2019 03.
Article in English | MEDLINE | ID: mdl-30686090

ABSTRACT

Diverse types of neurons must be specified in the developing brain to form the functional neural circuits that are necessary for the execution of daily tasks. Here, we describe the participation of Forkhead box class O (FOXO) in cell fate specification of a small subset of Drosophila ventral olfactory projection neurons (vPNs). Using the two-color labeling system, twin-spot MARCM, we determined the temporal birth order of each vPN type, and this characterization served as a foundation to investigate regulators of cell fate specification. Flies deficient for chinmo, a known temporal cell fate regulator, exhibited a partial loss of vPNs, suggesting that the gene plays a complex role in specifying vPN cell fate and is not the only regulator of this process. Interestingly, loss of foxo function resulted in the precocious appearance of late-born vPNs in place of early-born vPNs, whereas overexpression of constitutively active FOXO caused late-born vPNs to take on a morphology reminiscent of earlier born vPNs. Taken together, these data suggest that FOXO temporally regulates vPN cell fate specification. The comprehensive identification of molecules that regulate neuronal fate specification promises to provide a better understanding of the mechanisms governing the formation of functional brain tissue.


Subject(s)
Cell Differentiation/physiology , Drosophila Proteins/metabolism , Forkhead Transcription Factors/metabolism , Neurons/cytology , Olfactory Pathways/cytology , Animals , Animals, Genetically Modified , Cell Lineage/physiology , Neurogenesis/physiology , Neurons/metabolism , Olfactory Pathways/metabolism
9.
Med Microbiol Immunol ; 208(1): 59-68, 2019 Feb.
Article in English | MEDLINE | ID: mdl-30171337

ABSTRACT

Escherichia coli K1 is the most common Gram-negative bacteria causing neonatal meningitis. Polymorphonuclear leukocyte (PMN) transmigration across the blood-brain barrier (BBB) is the hallmark of bacterial meningitis. Reportedly, the deletion of virulence factor cglD (E44:ΔcglD) from E44 is responsible for a less efficient PMN transendothelial migration ability. In the present study, we found that complementation of the cglD gene into E44:ΔcglD mutant strain might restore the PMN count and myeloperoxidase level in a neonatal mouse meningitis. Using human brain microvascular endothelial cells (HBMECs), the main model of the BBB in vitro, we found that E44:ΔcglD mutant strain induced a less efficient PMN adhesion to HBMECs and down-regulated chemokines CXCL1, CXCL6 and CXCL8 and adhesion molecule E-selectin, compared with the E44 strain. Complementation of cglD restored the PMN adhesion to HBMECs and the level of these proteins. E44:ΔcglD mutant strain also induced a less efficient NF-κB pathway activation in HBMECs and reduced the soluble p65 (sp65) level in the cerebral spinal fluid of newborn mice, compared with the E44 strain. Complementation of cglD restored the NF-κB pathway activation and increased the sp65 levels. This suggests that cglD in E44 contributes to NF-κB pathway activation in the brain endothelium to promote PMN adhesion to HBMECs and transendothelial migration. Our identified novel requirement of cglD for immune activation and subsequent PMN entry into the central nervous system suggests that therapies directed at neutralising this molecule will be beneficial in preventing bacterial meningitis progression.


Subject(s)
Bacterial Proteins/metabolism , Endothelial Cells/drug effects , Endothelium/drug effects , Escherichia coli/pathogenicity , Meningitis, Bacterial/pathology , Neutrophils/immunology , Transendothelial and Transepithelial Migration , Virulence Factors/metabolism , Animals , Animals, Newborn , Antigens, Bacterial/analysis , Cell Adhesion , Cells, Cultured , Cerebrospinal Fluid/chemistry , Disease Models, Animal , Escherichia coli/classification , Escherichia coli/isolation & purification , Female , Gene Deletion , Genetic Complementation Test , Humans , Infant, Newborn , Male , Mice , Polysaccharides, Bacterial/analysis , Transcription Factor RelA/analysis
10.
Haematologica ; 103(11): 1785-1795, 2018 11.
Article in English | MEDLINE | ID: mdl-29954941

ABSTRACT

Neutrophils play essential roles in innate immunity and are the first responders to kill foreign micro-organisms, a function that partially depends on their granule content. The complicated regulatory network of neutrophil development and maturation remains largely unknown. Here we utilized neutrophil-deficient zebrafish to identify a novel role of Alas1, a heme biosynthesis pathway enzyme, in neutrophil development. We showed that Alas1-deficient zebrafish exhibited proper neutrophil initiation, but further neutrophil maturation was blocked due to heme deficiency, with lipid storage and granule formation deficiencies, and loss of heme-dependent granule protein activities. Consequently, Alas1-deficient zebrafish showed impaired bactericidal ability and augmented inflammatory responses when challenged with Escherichia coli These findings demonstrate the important role of Alas1 in regulating neutrophil maturation and physiological function through the heme. Our study provides an in vivo model of Alas1 deficiency and may be useful to evaluate the progression of heme-related disorders in order to facilitate the development of drugs and treatment strategies for these diseases.


Subject(s)
5-Aminolevulinate Synthetase , Neutrophils/immunology , Zebrafish Proteins , Zebrafish , 5-Aminolevulinate Synthetase/genetics , 5-Aminolevulinate Synthetase/immunology , Animals , Escherichia coli/genetics , Escherichia coli/immunology , Escherichia coli Infections/genetics , Escherichia coli Infections/immunology , Escherichia coli Infections/pathology , Fish Diseases/genetics , Fish Diseases/immunology , Fish Diseases/microbiology , Fish Diseases/pathology , Heme/genetics , Heme/immunology , Neutrophils/pathology , Zebrafish/immunology , Zebrafish/microbiology , Zebrafish Proteins/genetics , Zebrafish Proteins/immunology
11.
J Sep Sci ; 40(20): 3969-3975, 2017 Oct.
Article in English | MEDLINE | ID: mdl-28796417

ABSTRACT

Metal-organic frameworks-5 (MOF-5) was explored as a template to prepare porous carbon due to its high surface area, large pore volume, and permanent nanoscale porosity. Magnetic porous carbon, Co@MOF-5-C, was fabricated by the one-step direct carbonization of Co-doped MOF-5. After carbonization, the magnetic cobalt nanoparticles are well dispersed in the porous carbon matrix, and Co@MOF-5-C displays strong magnetism (with the saturation magnetization intensity of 70.17emu/g), high-specific surface area, and large pore volume. To evaluate its extraction performance, the Co@MOF-5-C was applied as an adsorbent for the magnetic solid-phase extraction of endocrine disrupting chemicals, followed by their analysis with high-performance liquid chromatography. The developed method exhibits a good linear response in the range of 0.5-100 ng/mL for pond water and 1.0-100 ng/mL for juice samples. The limits of detection (S/N = 3) for the analytes were in the range of 0.1-0.2 ng/mL.


Subject(s)
Carbon , Endocrine Disruptors/isolation & purification , Metal-Organic Frameworks , Solid Phase Extraction , Fresh Water/analysis , Fruit and Vegetable Juices/analysis , Magnetics
12.
Int J Mol Sci ; 18(5)2017 May 03.
Article in English | MEDLINE | ID: mdl-28467355

ABSTRACT

The formation of brain vasculature is an essential step during central nervous system development. The molecular mechanism underlying brain angiogenesis remains incompletely understood. The role of Atg7, an autophagy-related protein, in brain angiogenesis was investigated in this study. We found that the microvessel density in mice brains with endothelial-specific knockout of Atg7 (Atg7 EKO) was significantly decreased compared to wild-type control. Consistently, in vitro angiogenesis assays showed that Atg7 knockdown impaired angiogenesis in brain microvascular endothelial cells. Further results indicated that knockdown of Atg7 reduced interleukin-6 (IL-6) expression in brain microvascular endothelial cells, which is mediated by NF-κB-dependent transcriptional control. Interestingly, exogenous IL-6 restored the impaired angiogenesis and reduced cell motility caused by Atg7 knockdown. These results demonstrated that Atg7 has proangiogenic activity in brain angiogenesis which is mediated by IL-6 production in a NF-κB-dependent manner.


Subject(s)
Autophagy-Related Protein 7/metabolism , Brain/blood supply , Interleukin-6/metabolism , NF-kappa B/metabolism , Neovascularization, Physiologic/physiology , Analysis of Variance , Animals , Autophagy-Related Protein 7/genetics , Cell Movement/physiology , Cells, Cultured , Disease Models, Animal , Endothelial Cells , Humans , Mice , Mice, Knockout , Microvessels/growth & development , Microvessels/metabolism , Neovascularization, Physiologic/genetics
13.
J Pineal Res ; 58(4): 429-38, 2015 May.
Article in English | MEDLINE | ID: mdl-25752481

ABSTRACT

Melatonin induces apoptosis in many different cancer cell lines, including colorectal cancer. However, the precise mechanisms involved remain largely unresolved. In this study, we provide evidence to reveal a new mechanism by which melatonin induces apoptosis of colorectal cancer LoVo cells. Melatonin at pharmacological concentrations significantly suppressed cell proliferation and induced apoptosis in a dose-dependent manner. The observed apoptosis was accompanied by the melatonin-induced dephosphorylation and nuclear import of histone deacetylase 4 (HDAC4). Pretreatment with a HDAC4-specific siRNA effectively attenuated the melatonin-induced apoptosis, indicating that nuclear localization of HDAC4 is required for melatonin-induced apoptosis. Moreover, constitutively active Ca(2+) /calmodulin-dependent protein kinase II alpha (CaMKIIα) abrogated the melatonin-induced HDAC4 nuclear import and apoptosis of LoVo cells. Furthermore, melatonin decreased H3 acetylation on bcl-2 promoter, leading to a reduction of bcl-2 expression, whereas constitutively active CaMKIIα(T286D) or HDAC4-specific siRNA abrogated the effect of melatonin. In conclusion, the present study provides evidence that melatonin-induced apoptosis in colorectal cancer LoVo cells largely depends on the nuclear import of HDAC4 and subsequent H3 deacetylation via the inactivation of CaMKIIα.


Subject(s)
Apoptosis/drug effects , Calcium-Calmodulin-Dependent Protein Kinase Type 2/metabolism , Colorectal Neoplasms/metabolism , Histone Deacetylases/metabolism , Melatonin/pharmacology , Repressor Proteins/metabolism , Acetylation/drug effects , Cell Line, Tumor , Chromatin Immunoprecipitation , Humans
14.
Comput Biol Chem ; 112: 108150, 2024 Oct.
Article in English | MEDLINE | ID: mdl-39018587

ABSTRACT

OBJECTIVES: Lung adenocarcinoma (LUAD) is the most common subtype of non-small cell lung cancer. Understanding the molecular mechanisms underlying tumor progression is of great clinical significance. This study aims to identify novel molecular markers associated with LUAD subtypes, with the goal of improving the precision of LUAD subtype classification. Additionally, optimization efforts are directed towards enhancing insights from the perspective of patient survival analysis. MATERIALS AND METHODS: We propose an innovative feature-selection approach that focuses on LUAD classification, which is comprehensive and robust. The proposed method integrates multi-omics data from The Cancer Genome Atlas (TCGA) and leverages a synergistic combination of max-relevance and min-redundancy, least absolute shrinkage and selection operator, and Boruta algorithms. These selected features were deployed in six machine-learning classifiers: logistic regression, random forest, support vector machine, naive Bayes, k-Nearest Neighbor, and XGBoost. RESULTS: The proposed approach achieved an area under the receiver operating characteristic curve (AUC) of 0.9958 for LR. Notably, the accuracy and AUC of a composite model incorporating copy number, methylation, as well as RNA- sequencing data for expression of exons, genes, and miRNA mature strands surpassed the accuracy and AUC metrics of models with single-omics data or other multi-omics combinations. Survival analyses, revealed the SVM classifier to elicit optimal classification, outperforming that achieved by TCGA. To enhance model interpretability, SHapley Additive exPlanations (SHAP) values were utilized to elucidate the impact of each feature on the predictions. Gene Ontology (GO) enrichment analysis identified significant biological processes, molecular functions, and cellular components associated with LUAD subtypes. CONCLUSION: In summary, our feature selection process, based on TCGA multi-omics data and combined with multiple machine learning classifiers, proficiently identifies molecular subtypes of lung adenocarcinoma and their corresponding significant genes. Our method could enhance the early detection and diagnosis of LUAD, expedite the development of targeted therapies and, ultimately, lengthen patient survival.


Subject(s)
Adenocarcinoma of Lung , Lung Neoplasms , Humans , Adenocarcinoma of Lung/genetics , Adenocarcinoma of Lung/mortality , Adenocarcinoma of Lung/classification , Lung Neoplasms/genetics , Lung Neoplasms/mortality , Lung Neoplasms/classification , Lung Neoplasms/pathology , Machine Learning , Survival Analysis , Algorithms , Multiomics
15.
Discov Med ; 36(183): 730-738, 2024 Apr.
Article in English | MEDLINE | ID: mdl-38665022

ABSTRACT

BACKGROUND: Current research on radiomics for diagnosing and prognosing acute pancreatitis predominantly revolves around model development and testing. However, there is a notable absence of ongoing interpretation and analysis regarding the physical significance of these models and features. Additionally, there is a lack of extensive exploration of visual information within the images. This limitation hinders the broad applicability of radiomics findings. This study aims to address this gap by specifically analyzing filtered Computed Tomography (CT) image features of acute pancreatitis to identify meaningful visual markers in the pancreas and peripancreatic area. METHODS: Numerous filtered CT images were obtained through pyradiomics. The window width and window level were fine-tuned to emphasize the pancreas and peripancreatic regions. Subsequently, the LightGBM algorithm was employed to conduct an embedded feature screening, followed by statistical analysis to identify features with statistical significance (p-value < 0.01). Within the purview of the study, for each filtering method, features of high importance to the preceding prediction model were incorporated into the analysis. The image visual markers were then systematically sought in reverse, and their medical interpretation was undertaken to a certain extent. RESULTS: In Laplacian of Gaussian filtered images within the pancreatic region, severe acute pancreatitis (SAP) exhibited fewer small areas with repetitive greyscale patterns. Conversely, in the peripancreatic region, SAP displayed greater irregularity in both area size and the distribution of greyscale levels. In logarithmic images, SAP demonstrated reduced low greyscale connectivity in the pancreatic region, while showcasing a higher average variation in greyscale between two adjacent pixels in the peripancreatic region. Moreover, in gradient images, SAP presented with decreased repetition of two adjacent pixel greyscales within the pancreatic region, juxtaposed with an increased inhomogeneity in the size of the same greyscale region within the δ range in the peripancreatic region. CONCLUSIONS: Various filtered images convey distinct physical significance and properties. The selection of the appropriate filtered image, contingent upon the characteristics of the Region of Interest (ROI), enables a more comprehensive capture of the heterogeneity of the disease.


Subject(s)
Algorithms , Pancreatitis , Tomography, X-Ray Computed , Humans , Pancreatitis/diagnostic imaging , Pancreatitis/diagnosis , Pancreatitis/pathology , Tomography, X-Ray Computed/methods , Acute Disease , Male , Pancreas/diagnostic imaging , Pancreas/pathology , Female , Middle Aged , Radiomics
16.
Mol Biol Cell ; 35(4): ar54, 2024 Apr 01.
Article in English | MEDLINE | ID: mdl-38446615

ABSTRACT

Proper formation of the hippocampus is crucial for the brain to execute memory and learning functions. However, many questions remain regarding how pyramidal neurons (PNs) of the hippocampus mature and precisely position. Here we revealed that Setd2, the methyltransferase for histone 3 lysine 36 trimethylation (H3K36me3), is essential for the precise localization and maturation of PNs in the hippocampal CA1. The ablation of Setd2 in neural progenitors leads to irregular lamination of the CA1 and increased numbers of PNs in the stratum oriens. Setd2 deletion in postmitotic neurons causes mislocalization and immaturity of CA1 PNs. Transcriptome analyses revealed that SETD2 maintains the expressions of clustered protocadherin (cPcdh) genes. Together, Setd2 is required for proper hippocampal lamination and maturation of CA1 PNs.


Subject(s)
Hippocampus , Histones , Histone Methyltransferases/metabolism , Histones/metabolism , Hippocampus/metabolism
17.
Int J Biol Macromol ; 261(Pt 1): 129670, 2024 Mar.
Article in English | MEDLINE | ID: mdl-38280697

ABSTRACT

The oxidative microenvironment in fibrotic livers often diminishes the effectiveness of mesenchymal stem cells (MSCs)-based therapy. Recent research suggests that pharmacological pre-treatment could enhance the therapeutic performance of MSCs. In this study, we assessed the impact of Arctium lappa L. polysaccharides (ALP) on the biological properties of nasal ectomesenchymal stem cells (EMSCs) and investigated the augmenting effect of ALP pretreatment on EMSCs (ALP-EMSCs) for the treatment of liver fibrosis. ALP treatment demonstrated multiple biological impacts on EMSC functions regarding liver fibrosis: firstly, it maintained the stemness of the cells while boosting the EMSCs' paracrine effects; secondly, it increased the expression of anti-inflammatory and antioxidant factors; thirdly, it inhibited the activation of hepatic stellate cells (HSCs) and liver collagen build-up by modulating the Wnt/ß-catenin signaling pathways. Collectively, these effects helped to halt the progression of liver fibrosis. Therefore, the use of ALP-EMSCs presents an innovative and promising approach for treating hepatic fibrosis in clinical scenarios.


Subject(s)
Arctium , Mesenchymal Stem Cells , Humans , beta Catenin/metabolism , Wnt Signaling Pathway , Liver Cirrhosis/drug therapy , Liver Cirrhosis/metabolism
18.
J Cereb Blood Flow Metab ; 44(9): 1532-1550, 2024 Sep.
Article in English | MEDLINE | ID: mdl-38661094

ABSTRACT

Blood-brain barrier (BBB) disruption is increasingly recognized as an early contributor to the pathophysiology of cerebral ischemia/reperfusion (I/R) injury, and is also a key event in triggering secondary damage to the central nervous system. Recently, long non-coding RNA (lncRNA) have been found to be associated with ischemic stroke. However, the roles of lncRNA in BBB homeostasis remain largely unknown. Here, we report that long intergenic non-coding RNA-p21 (lincRNA-p21) was the most significantly down-regulated lncRNA in human brain microvascular endothelial cells (HBMECs) after oxygen and glucose deprivation/reoxygenation (OGD/R) treatment among candidate lncRNA, which were both sensitive to hypoxia and involved in atherosclerosis. Exogenous brain-endothelium-specific overexpression of lincRNA-p21 could alleviate BBB disruption, diminish infarction volume and attenuate motor function deficits in middle cerebral artery occlusion/reperfusion (MCAO/R) mice. Further results showed that lincRNA-p21 was critical to maintain BBB integrity by inhibiting the degradation of junction proteins under MCAO/R and OGD/R conditions. Specifically, lincRNA-p21 could inhibit autophagy-dependent degradation of occludin by activating PI3K/AKT/mTOR signaling pathway. Besides, lincRNA-p21 could inhibit VE-cadherin degradation by binding with miR-101-3p. Together, we identify that lincRNA-p21 is critical for BBB integrity maintenance, and endothelial lincRNA-p21 overexpression could alleviate cerebral I/R injury in mice, pointing to a potential strategy to treat cerebral I/R injury.


Subject(s)
Blood-Brain Barrier , Endothelial Cells , RNA, Long Noncoding , Reperfusion Injury , RNA, Long Noncoding/genetics , RNA, Long Noncoding/metabolism , Animals , Blood-Brain Barrier/metabolism , Reperfusion Injury/metabolism , Humans , Mice , Endothelial Cells/metabolism , Male , Infarction, Middle Cerebral Artery/metabolism , Brain Ischemia/metabolism , Signal Transduction , Mice, Inbred C57BL
19.
J Control Release ; 374: 563-576, 2024 Oct.
Article in English | MEDLINE | ID: mdl-39186983

ABSTRACT

Clinical guidelines for infectious keratitis treatment require that anti-inflammatory drugs can only be used after infection elimination, which causes irreversible inflammatory damage to the cornea. In this work, photodynamic metal organic frameworks (PCN-224) were used as drug carrier to load Pt NPs with catalase-like activity and anti-inflammatory drug (Dexamethasone, DXMS) for endogenous oxygen generation and reduced corneal damage, respectively. The photodynamic therapy (PDT) effect was greatly enhanced in bacteria elimination and bacterial biofilms removal through catalysis of overexpressed hydrogen peroxide (H2O2, ∼8.0 and 31.0 µM in bacterial solution and biofilms, respectively) into oxygen by Pt NPs. More importantly, the cationic liposome modified PCN-224@Pt@DXMS@Liposomes (PPDL NPs) greatly enhanced the adhesion to negatively charged ocular surface and penetration into corneal barrier and bacterial biofilms. Both in vitro cell viability test and in vivo eye irritation tests proved good biocompatibility of PPDL NPs under 660 nm laser irradiation. Furthermore, PDT of PPDL NPs in rapid bacteria killing was verified through infectious keratitis animal model. The superior bactericidal effect of antibacterial materials could largely replace the bactericidal effect of the immune system. It is worth mentioning that this simultaneous sterilization and anti-inflammation treatment mode is a new exploration against the clinical treatment guidelines.


Subject(s)
Anti-Inflammatory Agents , Biofilms , Cornea , Dexamethasone , Keratitis , Liposomes , Photochemotherapy , Animals , Cornea/microbiology , Cornea/drug effects , Keratitis/drug therapy , Keratitis/microbiology , Keratitis/immunology , Biofilms/drug effects , Dexamethasone/administration & dosage , Dexamethasone/therapeutic use , Photochemotherapy/methods , Anti-Inflammatory Agents/administration & dosage , Anti-Inflammatory Agents/pharmacology , Metal-Organic Frameworks/chemistry , Metal-Organic Frameworks/administration & dosage , Anti-Bacterial Agents/administration & dosage , Anti-Bacterial Agents/pharmacology , Hydrogen Peroxide , Rabbits , Humans , Metal Nanoparticles/administration & dosage , Metal Nanoparticles/chemistry , Mice , Photosensitizing Agents/administration & dosage , Photosensitizing Agents/therapeutic use , Photosensitizing Agents/pharmacology , Drug Carriers/chemistry , Sterilization/methods , Female , Cell Survival/drug effects
20.
Microorganisms ; 12(8)2024 Jul 23.
Article in English | MEDLINE | ID: mdl-39203346

ABSTRACT

Convalescent sera, rich in pathogen-specific antibodies, offers passive immunity to patients with infectious diseases. Screening assays using convalescent sera are crucial for evaluating therapeutic efficacy, selecting suitable serum donors, and standardizing assays. They measure antibody levels, neutralizing potential, and specificity against viruses like SARS-CoV-2, ensuring therapeutic serum contains potent antibodies. Standardized procedures enable reliable results and wider adoption of serum therapy for COVID-19. We have developed a high-content image-based assay for screening convalescent sera against SARS-CoV-2 variants. Using various cell lines, we identified optimal candidates, employed immunofluorescence to visualize infected cells, and assessed neutralizing antibody efficacy. Screening convalescent sera for therapeutic potential identified neutralizing activity against SARS-CoV-2 variants. Dose-response analysis showed variable neutralizing activity, with some sera exhibiting broad neutralization. Additionally, we explored the synergy between neutralizing sera and ß-d-N4-hydroxycytidine (NHC), an initial metabolite of molnupiravir. These assays enhance serum therapy's benefits for COVID-19 treatment and aid in understanding neutralizing activity against SARS-CoV-2 variants, addressing viral challenges.

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