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1.
PLoS Genet ; 18(7): e1010262, 2022 07.
Article in English | MEDLINE | ID: mdl-35793278

ABSTRACT

Urinary cell-free DNA (ucfDNA) is a potential biomarker for bladder cancer detection. However, the biological characteristics of ucfDNA are not well understood. We explored the roles of deoxyribonuclease 1 (DNASE1) and deoxyribonuclease 1-like 3 (DNASE1L3) in the fragmentation of ucfDNA using mouse models. The deletion of Dnase1 in mice (Dnase1-/-) caused aberrations in ucfDNA fragmentation, including a 24-fold increase in DNA concentration, and a 3-fold enrichment of long DNA molecules, with a relative decrease of fragments with thymine ends and reduction of jaggedness (i.e., the presence of single-stranded protruding ends). In contrast, such changes were not observed in mice with Dnase1l3 deletion (Dnase1l3-/-). These results suggested that DNASE1 was an important nuclease contributing to the ucfDNA fragmentation. Western blot analysis revealed that the concentration of DNASE1 protein was higher in urine than DNASE1L3. The native-polyacrylamide gel electrophoresis zymogram showed that DNASE1 activity in urine was higher than that in plasma. Furthermore, the proportion of ucfDNA fragment ends within DNase I hypersensitive sites (DHSs) was significantly increased in Dnase1-deficient mice. In humans, patients with bladder cancer had lower proportions of ucfDNA fragment ends within the DHSs when compared with participants without bladder cancer. The area under the curve (AUC) for differentiating patients with and without bladder cancer was 0.83, suggesting the analysis of ucfDNA fragmentation in the DHSs may have potential for bladder cancer detection. This work revealed the intrinsic links between the nucleases in urine and ucfDNA fragmentomics.


Subject(s)
Cell-Free Nucleic Acids , Urinary Bladder Neoplasms , Animals , Cell-Free Nucleic Acids/genetics , DNA/genetics , Deoxyribonuclease I/genetics , Deoxyribonuclease I/metabolism , Endodeoxyribonucleases/genetics , Endonucleases , Humans , Mice , Mice, Knockout , Urinary Bladder Neoplasms/genetics
2.
Genome Res ; 31(11): 2008-2021, 2021 11.
Article in English | MEDLINE | ID: mdl-34470801

ABSTRACT

The effects of DNASE1L3 or DNASE1 deficiency on cell-free DNA (cfDNA) methylation were explored in plasma of mice deficient in these nucleases and in DNASE1L3-deficient humans. Compared to wild-type cfDNA, cfDNA in DNASE1L3-deficient mice was significantly hypomethylated, while cfDNA in DNASE1-deficient mice was hypermethylated. The cfDNA hypomethylation in DNASE1L3-deficient mice was due to increased fragmentation and representation from open chromatin regions (OCRs) and CpG islands (CGIs). These findings were absent in DNASE1-deficient mice, demonstrating the preference of DNASE1 to cleave in hypomethylated OCRs and CGIs. We also observed a substantial decrease of fragment ends at methylated CpGs in the absence of DNASE1L3, thereby demonstrating that DNASE1L3 prefers to cleave at methylated CpGs. Furthermore, we found that methylation levels of cfDNA varied by fragment size in a periodic pattern, with cfDNA of specific sizes being more hypomethylated and enriched for OCRs and CGIs. These findings were confirmed in DNASE1L3-deficient human cfDNA. Thus, we have found that nuclease-mediated cfDNA fragmentation markedly affects cfDNA methylation level on a genome-wide scale. This work provides a foundational understanding of the relationship between methylation, nuclease biology, and cfDNA fragmentation.


Subject(s)
Cell-Free Nucleic Acids , DNA Fragmentation , Endodeoxyribonucleases , Animals , Cell-Free Nucleic Acids/genetics , Cell-Free Nucleic Acids/metabolism , Chromatin , CpG Islands/genetics , DNA Methylation , Endodeoxyribonucleases/genetics , Humans , Mice
3.
Liver Int ; 44(10): 2605-2614, 2024 Oct.
Article in English | MEDLINE | ID: mdl-39007640

ABSTRACT

BACKGROUND AND AIMS: Accurate biomarkers to predict outcomes following discontinuation of nucleos(t)ide analogue (NA) therapy are needed. We evaluated serum hepatitis B core-related antigen (HBcrAg) level as a biomarker for predicting outcomes after NA discontinuation. METHODS: Patients with HBeAg-negative chronic hepatitis B (CHB) without cirrhosis were enrolled in a prospective trial evaluating clinical outcomes until 96 weeks after NA discontinuation. End of treatment (EOT) and off-treatment levels of serum HBcrAg, HBsAg, HBV RNA and HBV DNA were used to predict key clinical outcomes including hepatitis flare (ALT ≥5 × ULN and HBV DNA > 2000 IU/mL). The SCALE-B score was calculated for the purposes of model validation. RESULTS: HBcrAg was tested amongst 65 participants. The median age was 54 years, 54% were male and 83% were Asian. HBcrAg was detectable in 86% patients. HBcrAg level ≥4 log U/mL at EOT was predictive of hepatitis flare [8/10 (80%) vs. 17/55 (31%), p = .001]. The presence of either HBcrAg ≥4 log U/mL or detectable HBV RNA at EOT predicted for both biochemical relapse and hepatitis flare. The SCALE-B model at EOT predicted for virological relapse, biochemical relapse, hepatitis flare and HBsAg loss in this cohort. An increase in the serum HBcrAg level off-treatment was also associated with hepatitis flare. No participant with EOT HBcrAg level ≥4 log U/mL achieved HBsAg loss. CONCLUSIONS: High levels of serum HBcrAg predict for hepatitis flare after stopping NA therapy and low likelihood of HBsAg loss at week 96. People with high levels of serum HBcrAg are not suitable candidates for NA discontinuation.


Subject(s)
Antiviral Agents , Biomarkers , DNA, Viral , Hepatitis B Core Antigens , Hepatitis B virus , Hepatitis B, Chronic , Humans , Male , Female , Middle Aged , Hepatitis B Core Antigens/blood , Antiviral Agents/therapeutic use , Prospective Studies , Hepatitis B, Chronic/drug therapy , Hepatitis B, Chronic/blood , Biomarkers/blood , DNA, Viral/blood , Adult , Hepatitis B virus/genetics , Hepatitis B Surface Antigens/blood , RNA, Viral/blood , Withholding Treatment , Symptom Flare Up , Aged
4.
Small ; 19(10): e2206257, 2023 03.
Article in English | MEDLINE | ID: mdl-36549673

ABSTRACT

This work focusses on developing a hybrid enzyme biofuel cell-based self-powered biosensor with appreciable stability and durability using murine leukemia fusion gene fragments (tDNA) as a model analyte. The cell consists of a Ti3 C2 Tx /multiwalled carbon nanotube/gold nanoparticle/glucose oxidase bioanode and a Zn/Co-modified carbon nanotube cathode. The bioanode uniquely exhibits strong electron transfer ability and a high surface area for the loading of 1.14 × 10-9  mol cm-2 glucose oxidase to catalyze glucose oxidation. Meanwhile, the abiotic cathode with a high oxygen reduction reaction activity negates the use of conventional bioenzymes as catalysts, which aids in extending the stability and durability of the sensing system. The biosensor offers a 0.1 fm-1 nm linear range and a detection limit of 0.022 fm tDNA. Additionally, the biosensor demonstrates a reproducibility of ≈4.85% and retains ≈87.42% of the initial maximal power density after a 4-week storage at 4 °C, verifying a significantly improved long-term stability.


Subject(s)
Bioelectric Energy Sources , Biosensing Techniques , Metal Nanoparticles , Nanotubes, Carbon , Animals , Mice , Glucose Oxidase/metabolism , Biofuels , Gold , Reproducibility of Results , Titanium , Electrodes , Glucose
6.
Liver Int ; 36(5): 642-50, 2016 05.
Article in English | MEDLINE | ID: mdl-26474013

ABSTRACT

BACKGROUND & AIMS: Serologic profiles after hepatitis B surface antigen (HBsAg) seroclearance in chronic hepatitis B (CHB) have not been well-studied. METHODS: We employed a highly sensitive HBsAg (hs-HBsAg) assay (lower detection limit 0.5 mIU/ml), 100 times more sensitive than conventional HBsAg measurements. CHB patients achieving HBsAg seroclearance defined by conventional assays were followed up for serum hs-HBsAg, HBV DNA and antibody to HBsAg (anti-HBs) levels at 0 months, 6-12 months and 3-5 years after HBsAg seroclearance. Factors associated with hs-HBsAg detectability were determined. RESULTS: One hundred and nine patients were recruited; 94 (86.2%) were followed up to years 3-5; and 25 patients (22.9%) were on nucleoside analogue therapy for a median duration of 6.0 (range 1.5-12.7) years before HBsAg seroclearance. Detectable hs-HBsAg was noted in 88 (80.7%), 60 (55.0%) and 20 (21.3%) patients at 0 months, 6-12 months and 3-5 years respectively. At years 3-5, genotype B patients, when compared to genotype C patients, had a higher anti-HBs positive rate (63.2% and 41.1% respectively, P = 0.036). Serum anti-HBs positivity, when compared to persistent anti-HBs negativity, was associated with a lower rate of hs-HBsAg detection (7.4% and 40% respectively, P < 0.001). Multivariate analysis showed anti-HBs negativity at years 3-5 to be independently associated with persistently positive hs-HBsAg (P = 0.007, odds ratio 7.1, 95% confidence interval 1.7-29.3). CONCLUSION: Serum hs-HBsAg could detect HBsAg presence in a substantial proportion of CHB after HBsAg seroclearance defined by conventional assays, especially among anti-HBs negative individuals. Serum hs-HBsAg could potentially assist differentiating HBsAg-negative CHB from individuals with only past HBV exposure without carrier state.


Subject(s)
DNA, Viral/blood , Hepatitis B Antibodies/blood , Hepatitis B Surface Antigens/blood , Hepatitis B, Chronic/blood , Adult , Aged , Aged, 80 and over , Antiviral Agents/therapeutic use , Female , Hepatitis B e Antigens/blood , Hepatitis B virus , Hepatitis B, Chronic/drug therapy , Hong Kong , Humans , Logistic Models , Male , Middle Aged , Multivariate Analysis , Viral Load , Young Adult
7.
Anal Chem ; 86(5): 2443-50, 2014 Mar 04.
Article in English | MEDLINE | ID: mdl-24490962

ABSTRACT

In this paper, physically small conical-tip carbon electrodes (∼2-5 µm diameter and ∼4 µm axial length) were hydrogenated to develop a probe capable of withstanding fouling during dopamine detection in vivo. Upon hydrogenation, the resultant hydrophobic sp(3) carbon surface deters adsorption of amphiphilic lipids, proteins, and peptides present in extracellular fluid and hence minimizes electrode fouling. These hydrogenated carbon electrodes showed a 35% decrease in sensitivity but little change in the limit of detection for dopamine over a 7-day incubation in a synthetic laboratory solution containing 1.0% (v/v) caproic acid (a lipid), 0.1% (w/v) bovine serum albumin and 0.01% (w/v) cytochrome C (both are proteins), and 0.002% (w/v) human fibrinopeptide B (a peptide). Subsequently, during dopamine detection in vivo, over 70% of the dopamine oxidation current remained after the first 30 min of a 60-min experiment, and at least 50% remained over the next half-period at the hydrogenated carbon electrodes. On the basis of these results, an initial average electrode surface fouling rate of 1.2% min(-1) was estimated, which gradually declined to 0.7% min(-1). These results support minimal fouling at hydrogenated carbon electrodes applied to dopamine detection in vivo.


Subject(s)
Carbon/chemistry , Dopamine/analysis , Electrodes , Limit of Detection , Microscopy, Atomic Force , Proteins/analysis
8.
Small Methods ; : e2401070, 2024 Sep 16.
Article in English | MEDLINE | ID: mdl-39279552

ABSTRACT

In this work, a horseradish peroxidase (HRP)-encapsulated metal organic framework (MOF)@MOF nanocomposite is developed for detecting H2O2 converted by dismutation of superoxide anions released from live HeLa mitochondria. Initially, an HRP-polyacrylic acid cluster is incorporated on a mesoporous, peroxidase-like Cu/Co-1,4-benzenedicarboxylate (BDC) MOF platform to avoid structural change and deactivation of HRP through its interactions with MOF metal ions. Additionally, a Cu/Co-BDC(HRP)@1,3,5-benzenetricarboxyate (BTC) core-shell MOF/MOF structure, also with peroxide-like properties, serves as a protective matrix for HRP. Then, ultrathin porous carbon shells (UPCS) are adopted to improve the electrical conductivity of the MOF@MOF. The Cu/Co-BDC(HRP)@BTC|UPCS sensing platform exhibits two linear ranges of 0.05-1 µM and 1-1000 µM with a sensitivity of 172 mA mM-1 cm-2 and 1.63 mA mM-1 cm-2, respectively. A limit of detection of 0.057 µM, good selectivity and stability over 35 days for H2O2 detection are also achieved. After treating the mitochondrial complex with specific inhibitors, amperometric results at the sensing platform confirmed complex I and III within mitochondria as the main electron leakage sites in the electron transfer chains. Therefore, this sensing platform provides a tool that may aid in predicting and even developing treatments for some oxidative stress diseases caused by mitochondrial abnormalities.

9.
Anal Chem ; 85(9): 4350-6, 2013 May 07.
Article in English | MEDLINE | ID: mdl-23581388

ABSTRACT

In this work, a highly sensitive and stable sensing scaffold consisting of gold nanoparticle-encapsulated TiO2 nanotubes, the hydrophilic ionic liquid, 1-decyl-3-methylimidazolium bromide, and Nafion was developed for the fabrication of electrochemical enzyme biosensors. A significant aspect of our work is the application of 12-phosphotungstic acid as both a highly localized photoactive reducing agent to deposit well-dispersed gold nanoparticles on TiO2 nanotubes and an electron mediator to accelerate the electron transfer between an enzyme and the electrode. After characterizing the nanocomposite component of the scaffold by Fourier transform infrared spectroscopy, X-ray diffraction and transmission electron microscopy, thiolated horseradish peroxidase (as a model enzyme) was immobilized on the scaffold and the biosensor was applied to the detection of H2O2. The direct electron transfer between the enzyme and the electrode was promoted by the excellent biocompatibility and conductivity of the scaffold. In addition, a thiolated enzyme has significantly improved the stability and direct electron transfer of horseradish peroxidase on the biosensor, which could be ascribed to the strong affinity between the sulfhydryl group on the enzyme and gold nanoparticles on the biosensor surface. Cyclic voltammetry, chronoamperometry, and square wave voltammetry were used to study the electrochemistry and analytical performance of the biosensor. A dynamic range from 65 to 1600 µM, a limit of detection of 5 µM, and a sensitivity of (18.1 ± 0.43) × 10(-3) µA µM(-1) H2O2 were obtained. The sensing scaffold based on the nanocomposite was demonstrated to be effective and promising in developing enzyme biosensors.


Subject(s)
Biosensing Techniques , Gold/chemistry , Horseradish Peroxidase/chemistry , Hydrogen Peroxide/analysis , Nanostructures/chemistry , Titanium/chemistry , Capsules/chemistry , Electrodes , Horseradish Peroxidase/metabolism , Sulfhydryl Compounds/chemistry , Sulfhydryl Compounds/metabolism
10.
Biosens Bioelectron ; 237: 115547, 2023 Oct 01.
Article in English | MEDLINE | ID: mdl-37515947

ABSTRACT

In this work, we have developed a nanocomposite consisting of horseradish peroxidase (HRP)-encapsulated 2D Zn-Co zeolite imidazole framework (ZIF) nanosheets strung on a ZnCoO nanowire array on a Ti support (denoted as 2D-Zn/Co-ZIF(HRP)|ZnCoO|Ti). This nanocomposite was then applied to constructing an electrochemical biosensor for detecting H2O2 derived from O2∙- released by mitochondria in living cells. This sensing platform shows excellent catalytic performance towards H2O2, attributable to the enzyme/metal-catalytic effect of HRP and Zn/Co-ZIF. The unique nano-string structure alleviates the aggregation of Zn/Co-ZIF nanosheets, readily exposes the catalytic active sites, protects the bioactivity of HRP, and reduces the charge/mass transfer pathway within Zn/Co-ZIF. The 2D-Zn/Co-ZIF(HRP)|ZnCoO|Ti biosensor offers two linear ranges of 0.2-10 µ M and 10-1100 µ M, a limit of detection of 0.082 µ M, a sensitivity of 3.3 mA mM-1 cm-2, good selectivity and stability over 40 days for H2O2 detection. After treating with specific mitochondrial complex inhibitors, the chronoamperometric results at the 2D-Zn/Co-ZIF(HRP)|ZnCoO|Ti confirmed complex I and III within the mitochondria electron transfer chain as the main electron leakage sites. This biosensor may contribute to the development of diagnostic health-care devices that shed light on the precaution and even treatment of oxidative stress diseases.


Subject(s)
Biosensing Techniques , Nanowires , Zeolites , Peroxidase , Zeolites/chemistry , Hydrogen Peroxide/chemistry , Superoxides , Biosensing Techniques/methods , Horseradish Peroxidase/chemistry , Imidazoles , Mitochondria/metabolism , Zinc
11.
Anal Bioanal Chem ; 402(9): 2817-26, 2012 Mar.
Article in English | MEDLINE | ID: mdl-22297858

ABSTRACT

A label-free electrochemical biosensor for detecting DNA hybridisation was developed by monitoring the change in the voltammetric activity of ferrocenecarboxylic acid at the biosensor­solution interface. The biosensor was constructed by initially immobilising on a glassy carbon electrode an anchoring layer consisting of chitosan, carboxyl group functionalised carbon nanofibres and glutaraldehye. Chitosan acted as an adhering agent and carbon nanofibres were strategically used to provide a large surface area with binding points for DNA immobilisation, while glutaraldehye was a linker for DNA probes on the electrode surface. Based on a two-factorial design, cyclic voltammetry of [Fe(CN)(6)](3-/4-) was performed to optimise the composition of the anchoring layer.Next, a 17-base pair DNA probe was attached to the anchoring layer, followed by its complementary target. Zr(IV) ion, known to exhibit affinity for oxygen-containing electroactive markers, for example, ferrocenecarboxylic acid, was then coordinated in the DNA duplex. In this way, ferrocenecarboxylic acid was attracted towards the biosensor for oxidation. A change in the voltammetric oxidation current of ferrocenecarboxylic acid pre- and post-hybridisation was used to provide an indication of hybridisation. A linear dynamic range between 0.5 and 40 nM and a detection limit of 88 pM of DNA target were then achieved. In addition, the biosensor exhibited good selectivity, repeatability and stability for the determination of DNA sequences.


Subject(s)
Biosensing Techniques/methods , DNA Probes/chemistry , Electrochemistry/methods , Biosensing Techniques/instrumentation , Carbon/chemistry , Chitosan/chemistry , DNA Probes/genetics , Electrochemistry/instrumentation , Nanofibers/chemistry , Nucleic Acid Hybridization , Zinc
12.
Article in English | MEDLINE | ID: mdl-36360963

ABSTRACT

The use of fluoride is effective in preventing dental caries. However, an excessive intake of fluoride leads to dental fluorosis, making it necessary to regularly monitor the fluoride intake especially for infants. There is hitherto a lack of information on fluoride content in infant foods from an Australian perspective. Therefore, this study aims to estimate the amount of fluoride content from a range of commercially available ready-to-eat (RTE) infant foods and drinks available in Australia. Based on an external calibration method, potentiometry involving a fluoride ion selective electrode and a silver|silver chloride reference electrode was conducted to analyse the fluoride content of a total of 326 solid food samples and 49 liquid food samples in this work. Our results showed an overall median (range) fluoride content of 0.16 (0.001-2.8) µg F/g of solid food samples, and 0.020 (0.002-1.2) µg F/mL of liquid food samples. In addition, ~77.5% of the liquid samples revealed a fluoride content < 0.05% µg F/mL. The highest variation of fluoride concentration (0.014-0.92 µg F/g) was found in formulas for ≥6 month-old infants. We have attributed the wide fluoride content variations in ready-to-eat infant foods and drinks to the processing steps, different ingredients and their origins, including water. In general, we found the fluoride content in most of the collected samples from Australian markets to be high and may therefore carry a risk of dental fluorosis. These results highlight the need for parents to receive appropriate information on the fluoride content of ready-to-eat infant food and drinks.


Subject(s)
Dental Caries , Fluorosis, Dental , Infant , Humans , Fluorides/analysis , Australia , Infant Food , Infant Formula/analysis
13.
Biosens Bioelectron ; 197: 113742, 2022 Feb 01.
Article in English | MEDLINE | ID: mdl-34740121

ABSTRACT

A major aspect of this work is the synergistic application of a poly(diphenylbutadiene)-BiOBr composite and a gold nanoparticle-linked CeO2 octahedron to develop a photoelectrochemical aptasensor with an easily measurable detection signal change. Specifically, poly(diphenylbutadiene) nanofiber-immobilised BiOBr flower-like microspheres were developed as a hybrid material with a heterojunction that facilitates high visible light absorption and efficient photo-generated charge separation, which are essential features for sensitive photoelectrochemical sensors. The model analyte acetamiprid was attached via its specific aptamer on the aptasensor. Separately, a gold nanoparticle-linked CeO2 octahedron was strategically used to significantly diminish the photocurrent by impeding electron transfer at the aptasensor surface. After acetamiprid binding, the CeO2 octahedrons were displaced from the aptasensor. This caused a weakened quenching effect and restored the photocurrent to accomplish an "on-off-on" detection mechanism. This photoelectrochemical aptasensor exhibited a detection limit of 0.05 pM over a linear range of 0.1 pM-10 µM acetamiprid. The use of an aptamer has provided good specificity to acetamiprid and anti-interference. In addition, an ∼5.8% relative standard deviation was estimated as the reproducibility of the photoelectrochemical aptasensor. Furthermore, nearly 90% of the initial photocurrent was still measurable after storing these aptasensors at room temperature for 4 weeks, demonstrating their stability.


Subject(s)
Aptamers, Nucleotide , Biosensing Techniques , Metal Nanoparticles , Bismuth , Butadienes , Electrochemical Techniques , Gold , Limit of Detection , Reproducibility of Results
14.
Analyst ; 136(24): 5204-10, 2011 Dec 21.
Article in English | MEDLINE | ID: mdl-22005508

ABSTRACT

An ultrasensitive electrochemical immmunosensor was demonstrated to be capable of detecting the hormone cortisol down to concentrations as low as 16 pg mL(-1). In addition, the immunosensor displayed a sensitivity of 1.6 µA pg(-1) mL(-1) and a linear range up to ∼2500 pg mL(-1) of cortisol. This immunosensor was constructed based on a Au nanoparticle|dimethyl 3,3'-dithiobispropionimidate·2HCl (DTBP)-Protein G scaffold-modified Au electrode. In this work, the Au nanoparticles were used to increase the electrochemically active surface area by 28% (with a standard deviation of 3%) to enhance the quantity of the Protein G scaffold on the electrode. Thiolation of Protein G by DTBP aided in avoiding the confirmation change of Protein G, while this Protein G-DTBP component offered an orientation-controlled immobilisation of the capture antibody on the Au electrode. In this immunosensor, a monoclonal anti-cortisol capture antibody was optimally aligned by the scaffold before a competitive immunoassay between sample cortisol and a horseradish peroxidase-labelled cortisol conjugate was conducted. For quantitative analysis, square wave voltammetry was used to monitor the reduction current of benzoquinone produced from a horseradish peroxidase catalysed reaction. The improved analytical performance of our immunosensor was attributed to the synergetic effect of Au nanoparticles and the Protein G-DTBP scaffold.


Subject(s)
Gold/chemistry , Hydrocortisone/analysis , Imidoesters/chemistry , Immunoassay/instrumentation , Metal Nanoparticles/chemistry , Nerve Tissue Proteins/chemistry , Antibodies, Monoclonal/immunology , Benzoquinones/metabolism , Biocatalysis , Biosensing Techniques , Dielectric Spectroscopy , Electrodes , Horseradish Peroxidase/chemistry , Horseradish Peroxidase/metabolism , Hydrocortisone/immunology , Sulfhydryl Compounds/chemistry
15.
J Mater Chem B ; 8(35): 7880-7893, 2020 09 21.
Article in English | MEDLINE | ID: mdl-32766616

ABSTRACT

This review focusses on unique material modification and signal amplification strategies reported in developing photoelectrochemical (PEC) biosensors with utmost sensitivity and selectivity. These successes have partly been achieved by applying photoactive materials that significantly circumvent major limitations including poor absorption of visible light, severe aggregation of nanostructures, easy charge recombination and low conductivity. In addition, several signal enhancement techniques were also demonstrated to have effectively improved the detection performance of PEC biosensors. Accordingly, we have begun this review with a systematic introduction of the concept, working principle, and characteristics of PEC biosensors. This was followed by a discussion of a range of material modification techniques, including quantum dot modification, metal/non-metal ion doping, the formation of heterojunctions and Z-scheme composites, used in the construction of PEC biosensors. Various signal amplification strategies including quantum dot sensitisation, the application of electron donors, energy transfer effect, steric hindrances of biomolecules, and the exfoliation of biomolecules from sensing surfaces are also presented in this review. Wherever possible, we have referred to relevant examples to explain and illustrate the corresponding working mechanism and effectiveness of the nanomaterials. Therefore, this review is aimed at providing an overall view on the current trend in material modification and signal amplification strategies for the development of PEC biosensors, which will aid in stimulating ideas for future progress in this field.


Subject(s)
Biosensing Techniques/methods , Nanostructures , Photochemical Processes , Electrochemistry
16.
Biosens Bioelectron ; 142: 111525, 2019 Oct 01.
Article in English | MEDLINE | ID: mdl-31369944

ABSTRACT

In this work, a metallic composite with strong electrocatalytic property was designed by uniformly decorating Pt and Sn nanoparticles on the surface of TiO2 nanorods (Pt-Sn@TiO2). A detection scheme was then developed based on a dual signal amplification strategy involving the Pt-Sn@TiO2 composite and exonuclease assisted target recycling. The Pt-Sn@TiO2 composite exhibited an enhanced oxygen reduction current owing to the synergistic effect between Pt and Sn, as well as high exposure of Pt (111) crystal face. Initially, a Pt-Sn@TiO2 modified glassy carbon electrode produced an amplified electrochemical signal for the reduction of dissolved oxygen in the analyte solution. Next, a DNA with a complementary sequence to a streptomycin aptamer (cDNA) was immobilised on the Pt-Sn@TiO2 modified electrode, followed by the streptomycin aptamer that hybridised with cDNA. The corresponding oxygen reduction current was diminished by 51% attributable to the hindrance from the biomolecules. After a mixture of streptomycin and RecJf exonuclease was introduced, both the streptomycin-aptamer complex and the cDNA were cleaved from the electrode, making the Pt-Sn and Pt (111) surface available for oxygen reduction. RecJf would also release streptomycin from the streptomycin-aptamer complex, allowing it to complex again with aptamers on the electrode. This has then promoted a cyclic amplification of the oxygen reduction current by 85%, which is quantitatively related to streptomycin. Under optimal conditions, the aptasensor exhibited a linear range of 0.05-1500 nM and a limit of detection of 0.02±0.0045 nM streptomycin. The sensor was then used in the real-life sample detection of streptomycin to demonstrate its potential applications to bioanalysis.


Subject(s)
Anti-Bacterial Agents/analysis , Aptamers, Nucleotide/chemistry , Biosensing Techniques/instrumentation , Nanocomposites/chemistry , Streptomycin/analysis , Titanium/chemistry , Animals , Electrochemical Techniques/instrumentation , Equipment Design , Food Analysis/instrumentation , Limit of Detection , Milk/chemistry , Nanocomposites/ultrastructure , Oxidation-Reduction , Oxygen/chemistry , Platinum/chemistry , Tin/chemistry
17.
Biosens Bioelectron ; 112: 193-201, 2018 Jul 30.
Article in English | MEDLINE | ID: mdl-29705617

ABSTRACT

In this work, a sensitive photoelectrochemical aptasensor was developed for kanamycin detection using an enhanced photocurrent response strategy, which is based on the surface plasmon resonance effect of gold nanoparticles deposited on a 3D TiO2-MoS2 flower-like heterostructure. A significant aspect of this development lies in the photoelectrochemical and morphological features of the unique ternary composite, which have contributed to the excellent performance of the sensor. To develop an aptasensor, mercapto-group modified aptamers were immobilised on the photoactive composite as a recognition unit for kanamycin. The TiO2-MoS2-AuNP composite was demonstrated to accelerate the electron transfer, increase the loading of aptamers and improve the visible light excitation of the sensor. Under optimal conditions, the aptasensor exhibited a dynamic range from 0.2 nM to 450 nM of kanamycin with a detection limit of 0.05 nM. Overall, we have successfully synergised both the electrical and the optical merits from individual components to form a ternary composite, which was then demonstrated as an effective scaffold for the development of PEC biosensors.


Subject(s)
Biosensing Techniques , Electrochemical Techniques , Kanamycin/isolation & purification , Metal Nanoparticles/chemistry , Gold/chemistry , Kanamycin/chemistry , Light , Limit of Detection , Molybdenum/chemistry , Photochemical Processes , Sulfides/chemistry , Titanium/chemistry
18.
Biosens Bioelectron ; 23(5): 633-9, 2007 Dec 15.
Article in English | MEDLINE | ID: mdl-17768040

ABSTRACT

To achieve a high efficiency of analyte capture by a capture antibody attached to an electrochemical immunosensor, we have immobilised an analyte-specific antibody on a self-assembled layer of recombinant Protein G that was thiolated with succinimidyl-6-[3'-(2-pyridyldithio)-propionamido] hexanoate (LC-SPDP). Then two techniques were employed for conjugating a second antigen-specific antibody to alkaline phosphatase (mAb2-AP) using either LC-SPDP or the biotin-streptavidin interaction as the mode of cross-linking the antibody and enzyme. After characterising the two mAb2-AP preparations (mAb2-(LC-SPDP)-AP and mAb2-(Biotin-SA)-AP), they were each used as the signal antibody for immunosensors formatted for two-site immunoassays where the capture antibody was attached to a Protein G-(LC-SPDP) scaffold on gold electrodes. The antibodies and assays were specific for the clinically important hormone, human chorionic gonadotrophin (hCG). Protein G-(LC-SPDP) provided a stable scaffold, while mAb2-(LC-SPDP)-AP and mAb2-(Biotin-SA)-AP performed well as the signal antibodies. Immunosensors with mAb2-(Biotin-SA)-AP were characterised by a limit of detection of 216 I UL(-1) for hCG and a linear response up to approximately 2000 I UL(-1). Conversely, immunosensors with mAb2-(LC-SPDP)-AP exhibited a limit of detection of 240 I UL(-1) and a linear response up to 4000 I UL(-1).


Subject(s)
Antibodies , Biosensing Techniques/instrumentation , Electrochemistry/instrumentation , Nerve Tissue Proteins , Sulfhydryl Compounds , Caproates , Cyclic GMP-Dependent Protein Kinases/chemistry , Humans , Immunoassay/instrumentation , Nerve Tissue Proteins/chemistry
19.
J Nanosci Nanotechnol ; 7(3): 891-7, 2007 Mar.
Article in English | MEDLINE | ID: mdl-17450851

ABSTRACT

This paper describes the fabrication and evaluation of carbon nanotube (CNT) electrodes grown on stainless steel (SS) plate and wire for electrochemical sensor applications. Multi-wall carbon nanotubes with different diameters were grown on the SS plate and wire by chemical vapor deposition from an ethylene precursor. The SS provides a good electrical and mechanical connection to the CNT, and the SS is a tough substrate. The SS part of the electrode was electrically insulated from the analyte so that only the CNT were active in sensing. Cyclic voltammetry for the reduction of 6 mM K3Fe(CN)6 in a 1.0 M KNO3 supporting electrolyte was performed to examine the redox behavior of the CNT-SS electrode. The cyclic voltammograms showed sigmoidal-like shapes, indicating that mass transport around the electrodes is dominated by radial diffusion. Based on the cyclic voltammograms, the effective area of the CNT-SS electrodes and the number of individual CNTs were estimated. These results indicate that the CNT-SS plate and wire electrodes are good candidates to develop practical in vivo biosensors.


Subject(s)
Nanotubes, Carbon/ultrastructure , Biosensing Techniques , Electrochemistry , Microelectrodes , Microscopy, Electron, Scanning , Nanotechnology , Nanowires/ultrastructure , Stainless Steel
20.
Anal Chim Acta ; 984: 86-95, 2017 Sep 01.
Article in English | MEDLINE | ID: mdl-28843572

ABSTRACT

In this work, g-C3N4 and TiO2 nanosheets were synergistically employed as a novel composite for developing a scaffold of a photoelectrochemical enzyme biosensor. In this way, we have improved the poor visible light excitation of TiO2 and retarded the photo-generated charge recombination on g-C3N4 to achieve an enhanced response at the photoelectrochemical biosensor, compared to that generated by the corresponding biosensors consisting of each individual component. Using glucose oxidase as a model enzyme, the biosensor was demonstrated to show strong visible light activity towards the enzyme mediated glucose oxidation. We have also observed a 350% enhanced photocurrent compared to that at a g-C3N4 based ITO electrode. In addition, the high specific surface area and excellent biocompatibility of TiO2 nanosheets have also positively contributed to the performance of the photoelectrochemical enzyme biosensor with a 0.05-16 mM linear range and a 0.01 mM glucose detection limit.


Subject(s)
Biosensing Techniques , Glucose Oxidase/metabolism , Light , Nanostructures , Titanium/chemistry , Electrochemical Techniques , Glucose/metabolism , Oxidation-Reduction
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