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1.
Physiol Plant ; 175(3): e13916, 2023.
Article in English | MEDLINE | ID: mdl-37093159

ABSTRACT

Camptotheca acuminata Decne., the main source of camptothecin (CPT), has received increasing attention for its remarkable antitumor activity. Many CPT derivatives are clinically used as effective anticancer agents worldwide. However, their biosynthesis mechanism remains unclear, and uncovering this pathway would greatly facilitate development of alternative CPT production methods to replace current inefficient plant-derived ones. The expression of >30,000 genes was accurately quantified using unique molecular identifier RNA sequencing in 10 C. acuminata tissues, and 7854 proteins from five tissues were quantified with label-free quantitative proteomics. Fifteen full-length transcriptomes were sequenced with long-read Oxford Nanopore Technologies, and 5692 alternative splicing events were discovered among 4746 genes. Integrated transcriptome and proteome analysis provided novel insights into CPT biosynthesis and its hierarchical regulation. Five cytochrome P450s and three O-methyltransferases were considered as candidates involved in the biosynthesis of CPT and its derivatives, while 15 transcription factors potentially regulating CPT biosynthesis were screened. These findings provide important clues for elucidating the biosynthetic mechanisms of CPT and its derivatives and substantially contribute to the future production of these anticancer agents with synthetic biology. The generated large-scale multiomics data also provide valuable resources for investigating the functional genomics of the most important CPT-producing plant species-C. acuminata.


Subject(s)
Antineoplastic Agents , Camptotheca , Transcriptome , Camptothecin/metabolism , Camptotheca/genetics , Camptotheca/metabolism , Proteome/genetics , Proteome/metabolism , Antineoplastic Agents/metabolism
2.
Eur Radiol ; 32(3): 2041-2049, 2022 Mar.
Article in English | MEDLINE | ID: mdl-34542696

ABSTRACT

OBJECTIVES: MR black-blood thrombus imaging (BTI) has been developed for the detection of cerebral venous thrombosis (CVT). Yet, there is a lack of real-world data to verifying its clinical performance. This study aims to evaluate the performance of BTI in diagnosing and staging CVT in a 5-year period. METHODS: Patients suspected of CVT were enrolled between 2014 and 2019. Patients with or without BTI scans were classified into group A and group B, respectively. The prevalence of correct diagnosis of CVT and patients with evaluable clot age were compared. The diagnostic performance of BTI including sensitivity, specificity, and specific staging information was further analyzed. RESULTS: Two hundred and twenty-one of the 308 patients suspected of CVT were eligible in the current study (114 in group A and 97 in group B), with 125 diagnosed by multidisciplinary teams to have CVTs (56 in group A, 69 in group B). The rate of correct diagnosis of CVT was higher in group A than that in group B (94.7% vs 60.8%, p < 0.001, x2 = 36.517) after adding BTI images. The percent of patients with evaluable staged segments between the two groups were 96.4% and 33.9%, respectively (x2 = 48.191, p < 0.001). BTI showed a sensitivity of 96.4% and 87.9% in the detection of CVT on per-patient and per-segment level, respectively. Up to 98.1% of all thrombosed segments could be staged by BTI and 59.6% of them were matched with clinical staging. CONCLUSIONS: In the actual clinical practice, BTI improves diagnostic confidence and has an excellent performance in confirming and staging CVT. KEY POINTS: • Black-blood thrombus imaging has good diagnostic performance in detecting cerebral venous thrombosis compared to traditional imaging methods with strong evidence in the actual clinical setting. • BTI helps clinicians to diagnose CVT with more accuracy and confidence, which can be served as a promising imaging examination. • BTI can also provide additional information of different thrombus ages objectively, the valuable reference for clinical strategy.


Subject(s)
Intracranial Thrombosis , Thrombosis , Venous Thrombosis , Humans , Intracranial Thrombosis/diagnostic imaging , Magnetic Resonance Imaging , Venous Thrombosis/diagnostic imaging
3.
Cancer Sci ; 112(6): 2522-2532, 2021 Jun.
Article in English | MEDLINE | ID: mdl-33728806

ABSTRACT

The 2019 novel coronavirus has spread rapidly around the world. Cancer patients seem to be more susceptible to infection and disease deterioration, but the factors affecting the deterioration remain unclear. We aimed to develop an individualized model for prediction of coronavirus disease (COVID-19) deterioration in cancer patients. The clinical data of 276 cancer patients diagnosed with COVID-19 in 33 designated hospitals of Hubei, China from December 21, 2019 to March 18, 2020, were collected and randomly divided into a training and a validation cohort by a ratio of 2:1. Cox stepwise regression analysis was carried out to select prognostic factors. The prediction model was developed in the training cohort. The predictive accuracy of the model was quantified by C-index and time-dependent area under the receiver operating characteristic curve (t-AUC). Internal validation was assessed by the validation cohort. Risk stratification based on the model was carried out. Decision curve analysis (DCA) were used to evaluate the clinical usefulness of the model. We found age, cancer type, computed tomography baseline image features (ground glass opacity and consolidation), laboratory findings (lymphocyte count, serum levels of C-reactive protein, aspartate aminotransferase, direct bilirubin, urea, and d-dimer) were significantly associated with symptomatic deterioration. The C-index of the model was 0.755 in the training cohort and 0.779 in the validation cohort. The t-AUC values were above 0.7 within 8 weeks both in the training and validation cohorts. Patients were divided into two risk groups based on the nomogram: low-risk (total points ≤ 9.98) and high-risk (total points > 9.98) group. The Kaplan-Meier deterioration-free survival of COVID-19 curves presented significant discrimination between the two risk groups in both training and validation cohorts. The model indicated good clinical applicability by DCA curves. This study presents an individualized nomogram model to individually predict the possibility of symptomatic deterioration of COVID-19 in patients with cancer.


Subject(s)
COVID-19/mortality , Neoplasms/virology , Nomograms , Aged , Area Under Curve , China , Decision Support Techniques , Disease Progression , Female , Humans , Male , Middle Aged , Neoplasms/mortality , Precision Medicine , Retrospective Studies , Risk Factors , Survival Analysis
4.
Entropy (Basel) ; 23(7)2021 Jun 29.
Article in English | MEDLINE | ID: mdl-34210057

ABSTRACT

Internal gear mechanism is widely used in micro-nano satellites due to its compact structure and high precision transmission. However, the vibration coupling caused by the small clearance coupling is more obvious and cannot be ignored under low speed, light load and zero gravity conditions. Based on the geometric relationship between radial clearance and backlash, a coupled model between dynamic backlash and radial clearance of internal meshing gear is established. Based on the conformal contact theory, the radial collision force model of the gear shaft and shaft sleeve considering the small clearances is established. Additionally, a multi-clearance gear rotor system test device is built to measure the vibration acceleration of the internal gear rotor system by an acceleration sensor and transmitted to the industrial computer through a signal collector for data processing. Through the comparison of simulation and experiment, the accuracy of the gear dynamics model is verified. The analysis results show that, compared with the traditional model, the calculation results of the gear mechanism model considering the small clearance coupling is closer to the experimental data.

5.
Int J Gynecol Cancer ; 30(10): 1520-1527, 2020 10.
Article in English | MEDLINE | ID: mdl-32839227

ABSTRACT

OBJECTIVE: High grade endometrial stromal sarcoma is a rare and highly malignant tumor that lacks a prognostic model. The aim of this study was to develop a prognostic nomogram predicting the overall survival of patients with high grade endometrial stromal sarcoma. METHODS: Clinical data for patients were derived from the Surveillance Epidemiology, and End Results database. Cox analysis and Akaike's information criterion were used to construct the nomogram. The concordance index, time dependent receiver operating characteristic curve, and calibration plot were used to evaluate the discriminative and calibrating capability. The net reclassification index, integrated discrimination improvement, and concordance index change were also compared between the nomogram and the International Federation of Gynecology and Obstetrics (FIGO) stage. Clinical benefit was evaluated using decision curve analysis. The patients were separated into groups with low and high nomogram risk scores. Kaplan-Meier curve analysis and Cox analysis were used to investigate the survival difference between the two groups. RESULTS: The training and validation cohorts had 461 and 195 patients, respectively. A nomogram that incorporated disease stage, age, surgery, lymph node status, radiotherapy, and chemotherapy for predicting overall survival was established and validated. The concordance index of the nomogram was 0.734 (0.708-0.761) in the training cohort and 0.705 (0.659-0.751) in the validation cohort. The calibration plots showed a favorable calibrating ability of the nomogram. The 1 year and 3 year time dependent receiver operating characteristic curves showed the better discriminative ability of the nomogram than the staging system. The concordance index change, net reclassification index, and integrated discrimination improvement also indicated a significantly (p<0.05) better predictive power of the nomogram over disease stage. Furthermore, decision curve analysis suggested that the nomogram was clinically useful and had a larger clinical net benefit than disease stage alone. Patients with a high risk score had distinctly poorer survival than those with low risk scores. CONCLUSIONS: A prognostic nomogram in patients with high grade endometrial stromal sarcoma exhibited favorable prognostic discrimination and survival prediction ability compared with FIGO stage.


Subject(s)
Endometrial Neoplasms/pathology , Nomograms , Sarcoma, Endometrial Stromal/pathology , Aged , Female , Humans , Kaplan-Meier Estimate , Middle Aged , Proportional Hazards Models , SEER Program
6.
J Clin Lab Anal ; 34(1): e23031, 2020 Jan.
Article in English | MEDLINE | ID: mdl-31713908

ABSTRACT

BACKGROUND: This study aimed to explore the correlation of forkhead box Q1 (FOXQ1) with clinicopathological features and survival profiles in patients with non-small cell lung cancer (NSCLC). METHODS: A total of 238 NSCLC patients with TNM stage I-III who underwent surgical resection were reviewed, and the expression of FOXQ1 in tumor and paired adjacent tissue was detected using immunohistochemistry assays. The clinical data and survival data of patients with NSCLC were retrieved and calculated. RESULTS: FOXQ1 expression was increased in tumor tissue (61.3% high expression and 38.7% low expression) compared with paired adjacent tissue (37.8% high expression and 62.2% low expression) (P < .001). In addition, high FOXQ1 expression was associated with larger tumor size (P = .042), lymph node metastasis (P = .040), and advanced TNM stage (P = .002). Disease-free survival (DFS) (P = .016) and overall survival (OS) (P = .008) were both reduced in patients with high FOXQ1 expression compared with patients with low FOXQ1 expression. Additionally, high FOXQ1 expression (P = .043), poor pathological differentiation (P = .003), and lymph node metastasis (P < .001) were independent risk factors for DFS, and high FOXQ1 expression (P = .021), tumor size (>5 cm) (P = .014), and lymph node metastasis (P < .001) were independent risk factors for OS. CONCLUSION: High FOXQ1 expression is associated with advanced tumor features as well as undesirable survival profiles in patients with NSCLC, implying the potential prognostic value of FOXQ1 for NSCLC.


Subject(s)
Biomarkers, Tumor/metabolism , Carcinoma, Non-Small-Cell Lung/metabolism , Forkhead Transcription Factors/metabolism , Lung Neoplasms/metabolism , Carcinoma, Non-Small-Cell Lung/genetics , Carcinoma, Non-Small-Cell Lung/pathology , Disease-Free Survival , Factor Analysis, Statistical , Female , Forkhead Transcription Factors/genetics , Gene Expression Regulation, Neoplastic , Humans , Lung Neoplasms/genetics , Lung Neoplasms/pathology , Male , Middle Aged , Multivariate Analysis , Prognosis , Proportional Hazards Models
7.
Skeletal Radiol ; 46(12): 1695-1706, 2017 Dec.
Article in English | MEDLINE | ID: mdl-28808764

ABSTRACT

OBJECTIVES: To investigate if using high-resolution 3-T MRI can identify additional injuries of the triangular fibrocartilage complex (TFCC) beyond the Palmer classification. MATERIALS AND METHODS: Eighty-six patients with surgically proven TFCC injury were included in this study. All patients underwent high-resolution 3-T MRI of the injured wrist. The MR imaging features of TFCC were analyzed according to the Palmer classification. RESULTS: According to the Palmer classification, 69 patients could be classified as having Palmer injuries (52 had traumatic tears and 17 had degenerative tears). There were 17 patients whose injuries could not be classified according to the Palmer classification: 13 had volar or dorsal capsular TFC detachment and 4 had a horizontal tear of the articular disk. CONCLUSION: Using high-resolution 3-T MRI, we have not only found all the TFCC injuries described in the Palmer classification, additional injury types were found in this study, including horizontal tear of the TFC and capsular TFC detachment. We propose the modified Palmer classification and add the injury types that were not included in the original Palmer classification.


Subject(s)
Magnetic Resonance Imaging/methods , Triangular Fibrocartilage/diagnostic imaging , Triangular Fibrocartilage/injuries , Adult , Aged , Female , Humans , Male , Middle Aged , Triangular Fibrocartilage/surgery
8.
J Foot Ankle Surg ; 56(4): 756-761, 2017.
Article in English | MEDLINE | ID: mdl-28633772

ABSTRACT

In the present study, we explored the effectiveness and complications of omnidirectional internal fixation using a double approach for treating Rüedi-Allgöwer type III pilon fractures. A retrospective analysis was performed of 19 cases of Rüedi-Allgöwer type III unilateral closed pilon fracture. With preoperative preparation and correct surgical timing, the reduction was performed using anteromedial and posterolateral approaches, and the fracture fragments were fixed by omnidirectional internal fixation. Imaging evaluation was performed using the Burwell-Charnley scoring system. The Johner-Wruhs scoring system was used to assess the functional status of the patients. A comprehensive evaluation of efficacy was performed using a 5-point Likert score. The complications were also recorded and analyzed. All patients were followed up for an average of 16.2 months. The operative incisions of 15 cases healed by primary intent and with delayed healing in 4. All patients had achieved bony union at an average of 16 weeks postoperatively. No deep infection, broken nail or withdrawn nail, exposed plate, or skin flap necrosis occurred. The Burwell-Charnley imaging evaluation showed that 14 patients had anatomic reduction of the articular surface and 5 had acceptable reduction. Using the Johner-Wruhs scoring system, the results were excellent for 8, good for 7, fair for 2, and poor for 2 patients; the combined rate of excellent and good results was 78.9%. The Likert score of efficacy self-reported by the patients was 3 to 4 points for 12 patients, 2 points for 4 patients, and 0 to 1 point for 3 patients. The Likert score of therapeutic efficacy reported by the physicians was 3 to 4 points for 10 patients, 2 points for 5 patients, and 0 to 1 point for 4 patients. Omnidirectional internal fixation using double approaches was an effective method to treat Rüedi-Allgöwer type III pilon fractures with satisfactory reduction and rigid fixation, good joint function recovery, and few complications.


Subject(s)
Ankle Fractures/surgery , Fracture Fixation, Internal/methods , Tibial Fractures/surgery , Adult , Ankle Fractures/diagnostic imaging , Female , Humans , Male , Middle Aged , Radiography , Recovery of Function , Retrospective Studies , Tibial Fractures/diagnostic imaging , Treatment Outcome
9.
Zhonghua Yi Xue Za Zhi ; 94(3): 174-7, 2014 Jan 21.
Article in Zh | MEDLINE | ID: mdl-24731456

ABSTRACT

OBJECTIVE: To explore the diagnostic value of 3.0T MRI in neurogenic tumor of soft tissue in the extremities. METHODS: The MRI appearance of 17 neurogenic tumors with pathological confirmation was retrospectively analyzed. Various imaging characteristics of tumors were evaluated and different imaging findings were compared. The diagnosis value of each MRI features was evaluated with receiver-operating-characteristics (ROC) analysis. RESULTS: In the benign tumors significant differences between neurilemmoma and neurofibromas were noted for the position (P = 0.044). Heterogenicity on T(2)-weighted fat suppression images was also significant in differentiating between neurilemmoma and neurofibromas ( P = 0.020) . The shape of tumors, maximum length of tumor short diameter, edem around masses, relationship with adjoining fascia had the best discriminatory ability. The ROC analysis yield the area under curve (AUC) of them was 0.967 (P = 0.037), 0.923 (P = 0.048) , 0.981 (P = 0.034) , 0.981 (P = 0.034), respectively. CONCLUSION: If the neurogenic tumors of soft tissue in the extremities had one or several features of these characteristics (irregular margin, big volume, edem around masses, aggressive behavior with adjoining fascia) on 3.0T MRI, they had more possibility to be malignant. T(2)-weighted fat suppression series on 3.0TMRI was very important for discrimination of tumor histological characteristics.


Subject(s)
Magnetic Resonance Imaging/methods , Peripheral Nervous System Neoplasms/diagnosis , Soft Tissue Neoplasms/diagnosis , Adult , Aged , Diagnosis, Differential , Female , Humans , Male , Middle Aged , Peripheral Nervous System Neoplasms/pathology , Retrospective Studies , Soft Tissue Neoplasms/secondary , Young Adult
10.
Zhonghua Yi Xue Za Zhi ; 93(45): 3598-601, 2013 Dec 03.
Article in Zh | MEDLINE | ID: mdl-24534310

ABSTRACT

OBJECTIVE: To explore the value of Magnetic resonance imaging (MRI) in the early rheumatoid arthritis (RA). METHODS: 56 patients (24 men and 32 women) fulfilling the 2010 ACR/EULAR for RA, 34 with early RA, and 22 with established RA, (disease duration < 12 months, and >12 months, respectively) were enrolled in the study. MRI of the dominant hand and wrist was performed by using short time inversion recovery (STIR), plain and contrast-enhanced T1-weighted sequences. Evaluation of bone marrow edema, bone erosions and synovitis was performed with the OMERACT RA MRI scoring system. RESULTS: Edema, erosions, and synovitis were present in early RA and established RA, and the prevalence was 88.2% (30/34), 91.1% (31/34), 100% (34/34) and 90.9% (20/22) , 95.4% (21/22), 100% (22/22) , respectively. But no significant difference was found in two group (P > 0.05). Significant differences in edema and erosions were found between earlier RA and established RA (P < 0.05). No significant difference was found in synovitis (P > 0.05). CONCLUSIONS: Bone marrow edema, bone erosions and synovitis are important sign of early RA. But bone edema and erosions in MRI may play an important role in the diagnosis of early RA.


Subject(s)
Arthritis, Rheumatoid/diagnosis , Hand , Magnetic Resonance Imaging , Wrist Joint , Adult , Aged , Arthritis, Rheumatoid/pathology , Female , Hand/pathology , Humans , Male , Middle Aged , Retrospective Studies , Wrist Joint/pathology
11.
Cancer Biomark ; 38(1): 77-102, 2023.
Article in English | MEDLINE | ID: mdl-37545222

ABSTRACT

BACKGROUND: Recent studies illustrated the effects of granzymes (GZMs) gene alterations on immunotherapy response of cancer patients. Thus, we aimed to systematically analyze the expression and prognostic value of GZMs for immunotherapy in different cancers, and identified heterogeneity of the GZMs expression-based CD8+ T cell subsets. METHODS: First, we analyzed GZMs expression and prognostic value at pan-cancer level. Meanwhile, we established a GZMs score by using the single-sample gene set enrichment analysis (ssGSEA) algorithm to calculate the enrichment scores (ES) based on a gene set of five GZMs. The potential value of GZMs score for predicting survival and immunotherapy response was evaluated using the tumor immune dysfunction and exclusion (TIDE) and immunophenoscore (IPS) algorithm, and we validated it in immunotherapy cohorts. CellChat, scMetabolism, and SCENIC R packages were used for intercellular communication networks, quantifying metabolism activity, and regulatory network reconstruction, respectively. RESULTS: The GZMs score was significantly associated with IPS, TIDE score. Patients with high GZMs score tended to have higher objective response rates of immunotherapy in melanoma and urothelial carcinoma. GZMs expression-based CD8+ T cell subsets presented heterogeneity in functions, metabolism, intercellular communications, and the tissue-resident memory programs in lung adenocarcinoma (LUAD). The transcription factors RUNX3 and ETS1, which may regulate the expression of GZMs, was found to be positively correlated with the tissue-resident memory T cells-related marker genes. CONCLUSIONS: The higher GZMs score may indicate better response and overall survival (OS) outcome for immunotherapy in melanoma and urothelial carcinoma but worse OS in renal cell carcinoma (RCC). The GZMs score is a potential prognostic biomarker of diverse cancers. RUNX3 and ETS1 may be the potential targets to regulate the infiltration of GZMs expression-based CD8+ T cell subsets and affect the tissue-resident memory programs in LUAD, which may affect the prognosis of LUAD patients and the response to immunotherapy.


Subject(s)
Adenocarcinoma of Lung , Carcinoma, Transitional Cell , Kidney Neoplasms , Lung Neoplasms , Melanoma , Urinary Bladder Neoplasms , Humans , Granzymes , T-Lymphocyte Subsets , Immunotherapy , CD8-Positive T-Lymphocytes , Prognosis , Tumor Microenvironment
12.
Adipocyte ; 12(1): 2201964, 2023 12.
Article in English | MEDLINE | ID: mdl-37042512

ABSTRACT

In this study, we evaluated the association between the PPAT volume and the prognosis of PCa patients after LRP. We retrospectively analysed data of 189 PCa patients who underwent LRP in Beijing Chaoyang Hospital. Volumes of PPAT and prostate were measured by magnetic resonance imaging (MRI), and normalized PPAT volume was computed (PPAT volume divided by prostate volume). Patients were then stratified into the high-PPAT group (n = 95) and low-PPAT group (n = 94) by the median of normalized PPAT volume (73%). The high-PPAT group had significantly higher Gleason score (total score 8 or more, 39.0% vs. 4.3%, p < 0.001) and pathological stage (stage T3b, 28.4% vs. 13.8%, p = 0.048). No significant correlation between normalized PPAT volume and body mass index (ρ = -0.012, p = 0.872) was observed. Kaplan-Meier curve analysis showed the high-PPAT group had significantly shorter biochemical recurrence (BCR) interval (median progression-free survival time 15.9 months vs. 32.7 months, p = 0.001). Univiarate and multivariate Cox regression analyses showed high normalized PPAT volume (>73%) (hazard ratio 1.787 [1.075-3.156], p = 0.002) were independent risk factors for BCR post-operatively. In conclusion, MRI-measured PPAT volume is of significant prognostic value for PCa patients undergoing LRP.


Subject(s)
Laparoscopy , Prostatic Neoplasms , Male , Humans , Prostate/surgery , Prostate/pathology , Prognosis , Retrospective Studies , Prostatic Neoplasms/diagnostic imaging , Prostatic Neoplasms/surgery , Prostatic Neoplasms/pathology , Prostatectomy/methods , Magnetic Resonance Imaging/methods , Adipose Tissue/diagnostic imaging , Adipose Tissue/pathology
13.
Curr Med Sci ; 43(4): 631-646, 2023 Aug.
Article in English | MEDLINE | ID: mdl-37558863

ABSTRACT

Cancer treatment has evolved rapidly due to major advances in tumor immunity research. However, due to the complexity, heterogeneity, and immunosuppressive microenvironment of tumors, the overall efficacy of immunotherapy is only 20%. In recent years, nanoparticles have attracted more attention in the field of cancer immunotherapy because of their remarkable advantages in biocompatibility, precise targeting, and controlled drug delivery. However, the clinical application of nanomedicine also faces many problems concerning biological safety, and the synergistic mechanism of nano-drugs with immunity remains to be elucidated. Our study summarizes the functional characteristics and regulatory mechanisms of nanoparticles in the cancer immune microenvironment and how nanoparticles activate and long-term stimulate innate immunity and adaptive immunity. Finally, the current problems and future development trends regarding the application of nanoparticles are fully discussed and prospected to promote the transformation and application of nanomedicine used in cancer treatment.


Subject(s)
Neoplasms , Humans , Neoplasms/drug therapy , Neoplasms/pathology , Immunotherapy , Nanomedicine , Drug Delivery Systems , Adaptive Immunity , Tumor Microenvironment
14.
Nat Plants ; 9(1): 179-190, 2023 01.
Article in English | MEDLINE | ID: mdl-36522449

ABSTRACT

Monoterpenoid indole alkaloids (MIAs) are among the most diverse specialized metabolites in plants and are of great pharmaceutical importance. We leveraged single-cell transcriptomics to explore the spatial organization of MIA metabolism in Catharanthus roseus leaves, and the transcripts of 20 MIA genes were first localized, updating the model of MIA biosynthesis. The MIA pathway was partitioned into three cell types, consistent with the results from RNA in situ hybridization experiments. Several candidate transporters were predicted to be essential players shuttling MIA intermediates between inter- and intracellular compartments, supplying potential targets to increase the overall yields of desirable MIAs in native plants or heterologous hosts through metabolic engineering and synthetic biology. This work provides not only a universal roadmap for elucidating the spatiotemporal distribution of biological processes at single-cell resolution, but also abundant cellular and genetic resources for further investigation of the higher-order organization of MIA biosynthesis, transport and storage.


Subject(s)
Secologanin Tryptamine Alkaloids , Secologanin Tryptamine Alkaloids/metabolism , Sequence Analysis, RNA , Gene Expression Regulation, Plant
15.
Rev Sci Instrum ; 93(4): 044706, 2022 Apr 01.
Article in English | MEDLINE | ID: mdl-35489949

ABSTRACT

Triggered gas switches with trigger electrodes, such as three-electrode spark switches and trigatron type spark switches, have been widely used in repetitive operating Marx generators due to their large current flowing capability. However, the ablation of trigger electrodes during repetitive operation is inevitable, which reduces the working life of triggered gas switches. In this paper, we introduced an over-voltage triggering method for two-electrode spark switches by replacing one of the charging inductors of the Marx generator with a pulse generator. The experimental results showed that a high-voltage trigger pulse with an amplitude of 60 kV and a rising speed of 7.65 kV/100 ns was obtained from a single stackable module with a 12 V lithium battery pack as the energy source. Due to the absence of trigger electrodes, the triggering method is beneficial to extend the lifetime of switches and realize a maintenance-free repetitive operating Marx generator.

16.
Rev Sci Instrum ; 93(5): 054704, 2022 May 01.
Article in English | MEDLINE | ID: mdl-35649789

ABSTRACT

In recent years, the pulse forming technology based on metal oxide varistors (MOVs) has been verified to be an effective way to generate high-voltage quasi-square pulses. Due to the limited varistor voltage of a single MOV brick, multiple MOV bricks connected in series are required to stabilize a pulse with high amplitude (larger than hundreds of kV), which leads to the rise of the series inductance of the MOV branch and the flat-top droop in the output waveform. This paper provides two solutions to reduce the influence of the MOV branch inductance on output waveforms. One is that a coaxial evolute structure of the MOV bricks connected in series is designed, which can not only improve the insulation capacity but also reduce the branch inductance. Another is that a flat-top compensation scheme named "PFN-MOV" (Pulse Forming Network) is proposed, which adds an LC filtering branch to shape the signal into a flat-top rising wave with ripple and then offsets the flat-top droop caused by the inductance of the MOV branch. Based on the above ideas, a high-voltage, long-pulse width, flat-top compensation pulse generator is designed and tested, and a quasi-square pulse with voltage amplitude of more than 500 kV, pulse width greater than 800 ns, rise time of less than 50 ns, and flat top of about 600 ns is obtained experimentally. This MOV based generator has the advantage of simple design, compact construction, and better flat top, which is promising to be used as a compact long-pulse driver in many fields, such as high-current accelerator, industrial dedusting, medical sterilization, and cancer treatment.

17.
Oxid Med Cell Longev ; 2022: 3921095, 2022.
Article in English | MEDLINE | ID: mdl-35035660

ABSTRACT

PURPOSE: Recent researches showed the vital role of BACH1 in promoting the metastasis of lung cancer. We aimed to explore the value of BACH1 in predicting the overall survival (OS) of early-stage (stages I-II) lung adenocarcinoma. Patients and Methods. Lung adenocarcinoma cases were screened from the Cancer Genome Atlas (TCGA) database. Functional enrichment analysis was performed to obtain the biological mechanisms of BACH1. Gene set enrichment analysis (GSEA) was performed to identify the difference of biological pathways between high- and low-BACH1 groups. Univariate and multivariate COX regression analysis had been used to screen prognostic factors, which were used to establish the BACH1 expression-based prognostic model in the TCGA dataset. The C-index and time-dependent AUC curve were used to evaluate predictive power of the model. External validation of prognostic value was performed in two independent datasets from Gene Expression Omnibus (GEO). Decision analysis curve was finally used to evaluate clinical usefulness of the BACH1-based model beyond pathologic stage alone. RESULTS: BACH1 was an independent prognostic factor for lung adenocarcinoma. High-expression BACH1 cases had worse OS. BACH1-based prognostic model showed an ideal C-index and t-AUC and validated by two GEO datasets, independently. More importantly, the BACH1-based model indicated positive clinical applicability by DCA curves. CONCLUSION: Our research confirmed that BACH1 was an important predictor of prognosis in early-stage lung adenocarcinoma. The higher the expression of BACH1, the worse OS of the patients.


Subject(s)
Adenocarcinoma of Lung/mortality , Lung Neoplasms/mortality , Adenocarcinoma of Lung/pathology , Aged , Female , Humans , Lung Neoplasms/pathology , Male , Neoplasm Staging , Prognosis , Survival Analysis
18.
Adipocyte ; 11(1): 653-664, 2022 12.
Article in English | MEDLINE | ID: mdl-36415995

ABSTRACT

In this study, we retrospectively evaluated the data of 901 men undergoing ultrasonography-guided systematic prostate biopsy between March 2013 and May 2022. Adipose features, including periprostatic adipose tissue (PPAT) thickness and subcutaneous fat thickness, were measured using MRI before biopsy. Prediction models of all PCa and clinically significant PCa (csPCa) (Gleason score higher than 6) were established based on variables selected by multivariate logistic regression and prediction nomograms were constructed. Patients with PCa had higher PPAT thickness (4.64 [3.65-5.86] vs. 3.54 [2.49-4.51] mm, p < 0.001) and subcutaneous fat thickness (29.19 [23.05-35.95] vs. 27.90 [21.43-33.93] mm, p = 0.013) than those without PCa. Patients with csPCa had higher PPAT thickness (4.78 [3.80-5.88] vs. 4.52 [3.80-5.63] mm, p = 0.041) than those with non-csPCa. Adding adipose features to the prediction models significantly increased the area under the receiver operating characteristics curve for the prediction of all PCa (0.850 vs. 0.819, p < 0.001) and csPCa (0.827 vs. 0.798, p < 0.001). Based on MRI-measured adipose features and clinical parameters, we established two nomograms that were simple to use and could improve patient selection for prostate biopsy in Chinese population.


Subject(s)
Prostate , Prostatic Neoplasms , Male , Humans , Prostate/diagnostic imaging , Prostate/pathology , Retrospective Studies , Prostatic Neoplasms/diagnostic imaging , Prostatic Neoplasms/pathology , Biopsy , Magnetic Resonance Imaging , Adipose Tissue/diagnostic imaging , Adipose Tissue/pathology , China
19.
Environ Sci Pollut Res Int ; 29(10): 14158-14175, 2022 Feb.
Article in English | MEDLINE | ID: mdl-34601684

ABSTRACT

In recent years, moisture buffering materials for interior finishing have received much attention for their ability to regulate indoor humidity passively. It is necessary to investigate the potential of such materials' moisture buffering performance before application because the effect is highly climate and material dependent. However, existing studies in China lack a comprehensive overview of the moisture buffering potential of different interior finishing materials throughout the large country with a wide spectrum of climates. This paper aims to outline the moisture buffering potential for office buildings in various climates in China through numerical methods. Specifically, simulations in 15 representative Chinese cities are conducted with five interior finishing materials under two heating, ventilation, and air conditioning (HVAC) scenarios. The results show that the moisture buffering materials hold a general potential to regulate indoor humidity conditions and reduce buildings' HVAC load. Such benefits are evident in the mild climate but weak in humid areas. The moisture buffering effect also displays significant seasonal variations and could worsen indoor humidity conditions in some cases, indicating the importance of utilizing moisture buffering materials properly. In addition, although moisture buffering materials can reduce the HVAC load, the reduction is limited, within 3 kWh/m2, in most simulated cases. The energy-saving benefits of moisture buffering materials should thus not be over-emphasized. Finally, suggestions are put forward to instruct the choice of interior finishing material according to climate and buildings' HVAC scenarios.


Subject(s)
Air Pollution, Indoor , Air Conditioning , Air Pollution, Indoor/analysis , China , Climate , Humidity , Ventilation
20.
Front Genet ; 13: 820135, 2022.
Article in English | MEDLINE | ID: mdl-35222540

ABSTRACT

Background: Mainstream application of cancer immunotherapy is hampered by the low response rate of most cancer patients. A novel immunotherapeutic target or a biomarker predicting response to immunotherapy needs to be developed. Guanylate-binding protein 1 (GBP1) is an interferon (IFN)-inducible guanosine triphosphatases (GTPases) involving inflammation and infection. However, the immunological effects of GBP1 in pan-cancer patients are still obscure. Methods: Using large-scale public data, we delineated the landscape of GBP1 across 33 cancer types. The correlation between GBP1 expression or mutation and immune cell infiltration was estimated by ESTIMATE, TIMER, xCell, and quanTIseq algorithms. GBP1-related genes and proteins were subjected to function enrichment analysis. Clustering analysis explored the relationship between GBP1 expression and anti-tumor immune phenotypes. We assessed the patient's response to immunotherapy using the tumor immune dysfunction and exclusion (TIDE) score and immunophenoscore (IPS). Furthermore, we validated the predictive power of GBP1 expression in four independent immunotherapy cohorts. Results: GBP1 was differentially expressed in tumors and normal tissues in multiple cancer types. Distinct correlations existed between GBP1 expression and prognosis in cancer patients. GBP1 expression and mutation were positively associated with immune cell infiltration. Function enrichment analysis showed that GBP1-related genes were enriched in immune-related pathways. Positive correlations were also observed between GBP1 expression and the expression of immune checkpoints, as well as tumor mutation burden (TMB). Pan-cancer patients with higher GBP1 expression were more inclined to display "hot" anti-tumor immune phenotypes and had lower TIDE scores and higher immunophenoscore, suggesting that these patients had better responses to immunotherapy. Patients with higher GBP1 expression exhibited improved overall survival and clinical benefits in immunotherapy cohorts, including the Gide et al. cohort [area under the curve (AUC): 0.813], the IMvigor210 cohort (AUC: 0.607), the Lauss et al. cohort (AUC: 0.740), and the Kim et al. cohort (AUC: 0.793). Conclusion: This study provides comprehensive insights into the role of GBP1 in a pan-cancer manner. We identify GBP1 expression as a predictive biomarker for immunotherapy, potentially enabling more precise and personalized immunotherapeutic strategies in the future.

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