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1.

Comprehensive In Vivo Interrogation Reveals Phenotypic Impact of Human Enhancer Variants.

Kvon, Evgeny Z; Zhu, Yiwen; Kelman, Guy; Novak, Catherine S; Plajzer-Frick, Ingrid; Kato, Momoe; Garvin, Tyler H; Pham, Quan; Harrington, Anne N; Hunter, Riana D; Godoy, Janeth; Meky, Eman M; Akiyama, Jennifer A; Afzal, Veena; Tran, Stella; Escande, Fabienne; Gilbert-Dussardier, Brigitte; Jean-Marçais, Nolwenn; Hudaiberdiev, Sanjarbek; Ovcharenko, Ivan; Dobbs, Matthew B; Gurnett, Christina A; Manouvrier-Hanu, Sylvie; Petit, Florence; Visel, Axel; Dickel, Diane E; Pennacchio, Len A.

Cell ; 180(6): 1262-1271.e15, 2020 03 19.

Article in English | MEDLINE | ID: mdl-32169219

2.

Ultraconserved Enhancers Are Required for Normal Development.

Dickel, Diane E; Ypsilanti, Athena R; Pla, Ramón; Zhu, Yiwen; Barozzi, Iros; Mannion, Brandon J; Khin, Yupar S; Fukuda-Yuzawa, Yoko; Plajzer-Frick, Ingrid; Pickle, Catherine S; Lee, Elizabeth A; Harrington, Anne N; Pham, Quan T; Garvin, Tyler H; Kato, Momoe; Osterwalder, Marco; Akiyama, Jennifer A; Afzal, Veena; Rubenstein, John L R; Pennacchio, Len A; Visel, Axel.

Cell ; 172(3): 491-499.e15, 2018 01 25.

Article in English | MEDLINE | ID: mdl-29358049

3.

Dendritic cell type 3 arises from Ly6C⁺ monocyte-dendritic cell progenitors.

Liu, Zhaoyuan; Wang, Haiting; Li, Ziyi; Dress, Regine J; Zhu, Yiwen; Zhang, Shuangyan; De Feo, Donatella; Kong, Wan Ting; Cai, Peiliang; Shin, Amanda; Piot, Cécile; Yu, Jiangyan; Gu, Yaqi; Zhang, Mingnan; Gao, Caixia; Chen, Lei; Wang, Honglin; Vétillard, Mathias; Guermonprez, Pierre; Kwok, Immanuel; Ng, Lai Guan; Chakarov, Svetoslav; Schlitzer, Andreas; Becher, Burkhard; Dutertre, Charles-Antoine; Su, Bing; Ginhoux, Florent.

Immunity ; 56(8): 1761-1777.e6, 2023 08 08.

Article in English | MEDLINE | ID: mdl-37506694

4.

Single-cell, whole-embryo phenotyping of mammalian developmental disorders.

Huang, Xingfan; Henck, Jana; Qiu, Chengxiang; Sreenivasan, Varun K A; Balachandran, Saranya; Amarie, Oana V; Hrabe de Angelis, Martin; Behncke, Rose Yinghan; Chan, Wing-Lee; Despang, Alexandra; Dickel, Diane E; Duran, Madeleine; Feuchtinger, Annette; Fuchs, Helmut; Gailus-Durner, Valerie; Haag, Natja; Hägerling, Rene; Hansmeier, Nils; Hennig, Friederike; Marshall, Cooper; Rajderkar, Sudha; Ringel, Alessa; Robson, Michael; Saunders, Lauren M; da Silva-Buttkus, Patricia; Spielmann, Nadine; Srivatsan, Sanjay R; Ulferts, Sascha; Wittler, Lars; Zhu, Yiwen; Kalscheuer, Vera M; Ibrahim, Daniel M; Kurth, Ingo; Kornak, Uwe; Visel, Axel; Pennacchio, Len A; Beier, David R; Trapnell, Cole; Cao, Junyue; Shendure, Jay; Spielmann, Malte.

Nature ; 623(7988): 772-781, 2023 Nov.

Article in English | MEDLINE | ID: mdl-37968388

5.

Socioeconomic changes predict genome-wide DNA methylation in childhood.

Liu, Jiaxuan; Cerutti, Janine; Lussier, Alexandre A; Zhu, Yiwen; Smith, Brooke J; Smith, Andrew D A C; Dunn, Erin C.

Hum Mol Genet ; 32(5): 709-719, 2023 02 19.

Article in English | MEDLINE | ID: mdl-35899434

6.

Therapeutic Effects of Hematopoietic Stem Cell Derived From Gene-Edited Mice on ß654-Thalassemia.

Lu, Dan; Gong, Xiuli; Guo, Xinbing; Chen, Yanwen; Zhu, Yiwen; Fang, Yudan; Cai, Qin; Xu, Miao; Yang, Hua; Li, Dali; Zeng, Yitao; Zeng, Fanyi.

Stem Cells ; 42(3): 278-289, 2024 Mar 14.

Article in English | MEDLINE | ID: mdl-38134938

7.

Noncoding deletions reveal a gene that is critical for intestinal function.

Oz-Levi, Danit; Olender, Tsviya; Bar-Joseph, Ifat; Zhu, Yiwen; Marek-Yagel, Dina; Barozzi, Iros; Osterwalder, Marco; Alkelai, Anna; Ruzzo, Elizabeth K; Han, Yujun; Vos, Erica S M; Reznik-Wolf, Haike; Hartman, Corina; Shamir, Raanan; Weiss, Batia; Shapiro, Rivka; Pode-Shakked, Ben; Tatarskyy, Pavlo; Milgrom, Roni; Schvimer, Michael; Barshack, Iris; Imai, Denise M; Coleman-Derr, Devin; Dickel, Diane E; Nord, Alex S; Afzal, Veena; van Bueren, Kelly Lammerts; Barnes, Ralston M; Black, Brian L; Mayhew, Christopher N; Kuhar, Matthew F; Pitstick, Amy; Tekman, Mehmet; Stanescu, Horia C; Wells, James M; Kleta, Robert; de Laat, Wouter; Goldstein, David B; Pras, Elon; Visel, Axel; Lancet, Doron; Anikster, Yair; Pennacchio, Len A.

Nature ; 571(7763): 107-111, 2019 07.

Article in English | MEDLINE | ID: mdl-31217582

8.

Childhood maltreatment and health in the UK Biobank: triangulation of outcome-wide and polygenic risk score analyses.

Espinosa Dice, Ana Lucia; Lawn, Rebecca B; Ratanatharathorn, Andrew; Roberts, Andrea L; Denckla, Christy A; Kim, Ariel H; de la Rosa, Pedro A; Zhu, Yiwen; VanderWeele, Tyler J; Koenen, Karestan C.

BMC Med ; 22(1): 135, 2024 Mar 25.

Article in English | MEDLINE | ID: mdl-38523269

9.

Depressive symptoms in adolescence and adult educational and employment outcomes: a structured life course analysis.

López-López, José A; Tilling, Kate; Pearson, Rebecca M; Fazel, Mina S; Washbrook, Elizabeth; Zhu, Yiwen; Smith, Brooke J; Dunn, Erin C; Smith, Andrew D A C.

Psychol Med ; : 1-8, 2024 May 31.

Article in English | MEDLINE | ID: mdl-38818779

10.

Enhancer redundancy provides phenotypic robustness in mammalian development.

Osterwalder, Marco; Barozzi, Iros; Tissières, Virginie; Fukuda-Yuzawa, Yoko; Mannion, Brandon J; Afzal, Sarah Y; Lee, Elizabeth A; Zhu, Yiwen; Plajzer-Frick, Ingrid; Pickle, Catherine S; Kato, Momoe; Garvin, Tyler H; Pham, Quan T; Harrington, Anne N; Akiyama, Jennifer A; Afzal, Veena; Lopez-Rios, Javier; Dickel, Diane E; Visel, Axel; Pennacchio, Len A.

Nature ; 554(7691): 239-243, 2018 02 08.

Article in English | MEDLINE | ID: mdl-29420474

11.

Sleep architecture as a candidate for phenotyping sleep bruxism: A narrative physiological review.

Zhu, Yiwen; Toyota, Risa; Shiraishi, Yuki; Katagiri, Ayano; Yamada, Masaharu; Higashiyama, Makoto; Toyoda, Hiroki; Lavigne, Gilles; Kato, Takafumi.

J Oral Rehabil ; 51(1): 87-102, 2024 Jan.

Article in English | MEDLINE | ID: mdl-37114936

12.

Classification of oolong tea varieties based on computer vision and convolutional neural networks.

Zhu, Yiwen; Chen, Siyuan; Yin, Hanzhe; Han, Xihao; Xu, Menghan; Wang, Wenli; Zhang, Yin; Feng, Xiaoxiao; Liu, Yuan.

J Sci Food Agric ; 104(3): 1630-1637, 2024 Feb.

Article in English | MEDLINE | ID: mdl-37842747

13.

Metabolomic profiles of chronic distress are associated with cardiovascular disease risk and inflammation-related risk factors.

Balasubramanian, Raji; Shutta, Katherine H; Guasch-Ferre, Marta; Huang, Tianyi; Jha, Shaili C; Zhu, Yiwen; Shadyab, Aladdin H; Manson, JoAnn E; Corella, Dolores; Fitó, Montserrat; Hu, Frank B; Rexrode, Kathryn M; Clish, Clary B; Hankinson, Susan E; Kubzansky, Laura D.

Brain Behav Immun ; 114: 262-274, 2023 11.

Article in English | MEDLINE | ID: mdl-37557964

14.

Cobalt-Catalyzed Direct Alkoxylation of Indoles.

Wei, Ping; Zhu, Yiwen; Ying, Jun; Wu, Xiao-Feng.

J Org Chem ; 88(9): 6274-6280, 2023 May 05.

Article in English | MEDLINE | ID: mdl-37040324

15.

A hydrochemical and isotopic approach for source identification and health risk assessment of groundwater arsenic pollution in the central Yinchuan basin.

Zhu, Yiwen; Yang, Qingchun; Wang, Hao; Yang, Junwei; Zhang, Xunyu; Li, Zijun; Martín, Jordi Delgado.

Environ Res ; 231(Pt 2): 116153, 2023 08 15.

Article in English | MEDLINE | ID: mdl-37196693

16.

A strategy combining chemical analysis and network pharmacology to investigate the mechanism of Xiao'er Qingre Zhike Oral solution in cough.

Yang, Xiao-Yun; Zhu, Yi-Wen; Fan, Li; Yi, Shan-Yong.

Biomed Chromatogr ; 37(4): e5592, 2023 Apr.

Article in English | MEDLINE | ID: mdl-36733235

17.

A Targeting Singlet Oxygen Battery for Multidrug-Resistant Bacterial Deep-Tissue Infections.

Zhu, Yiwen; Gao, Minzheng; Su, Mengrui; Shen, Yanzhe; Zhang, Kai; Yu, Bingran; Xu, Fu-Jian.

Angew Chem Int Ed Engl ; 62(36): e202306803, 2023 09 04.

Article in English | MEDLINE | ID: mdl-37458367

18.

Dynamic BAF chromatin remodeling complex subunit inclusion promotes temporally distinct gene expression programs in cardiogenesis.

Hota, Swetansu K; Johnson, Jeffrey R; Verschueren, Erik; Thomas, Reuben; Blotnick, Aaron M; Zhu, Yiwen; Sun, Xin; Pennacchio, Len A; Krogan, Nevan J; Bruneau, Benoit G.

Development ; 146(19)2019 07 05.

Article in English | MEDLINE | ID: mdl-30814119

19.

Clinical significance of circulating tumour cells and tumour marker detection in the chemotherapeutic evaluation of advanced colorectal cancer.

Shen, Feifei; Zhu, Yiwen; Wang, Fan; Cai, Xun; Ding, Honghua; Zhou, Fei; Wang, Jingjue; Gu, Hongli; Liu, Chuan; Li, Qi.

Colorectal Dis ; 24(1): 68-76, 2022 01.

Article in English | MEDLINE | ID: mdl-34611964

20.

Exposure to early childhood maltreatment and its effect over time on social cognition.

Crawford, Katherine M; Choi, Karmel; Davis, Kathryn A; Zhu, Yiwen; Soare, Thomas W; Smith, Andrew D A C; Germine, Laura; Dunn, Erin C.

Dev Psychopathol ; 34(1): 409-419, 2022 02.

Article in English | MEDLINE | ID: mdl-33070801

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