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1.
Glob Chang Biol ; 29(24): 7159-7172, 2023 Dec.
Article in English | MEDLINE | ID: mdl-37830780

ABSTRACT

The frequency and intensity of droughts worldwide are challenging the conservation of soil organic carbon (SOC) pool. Microbial necromass is a key component of SOC, but how it responds to drought at specific soil depths remains largely unknown. Here, we conducted a 3-year field experiment in a forest plantation to investigate the impacts of drought intensities under three treatments (ambient control [CK], moderate drought [30% throughfall removal], and intensive drought [50% throughfall removal]) on soil microbial necromass pools (i.e., bacterial necromass carbon, fungal necromass carbon, and total microbial necromass carbon). We showed that the effects of drought on microbial necromass depended on microbial groups, soil depth, and drought intensity. While moderate drought increased total (+9.1% ± 3.3%) and fungal (+13.5% ± 4.9%) necromass carbon in the topsoil layer (0-15 cm), intensive drought reduced total (-31.6% ± 3.7%) and fungal (-43.6% ± 4.0%) necromass in the subsoil layer (15-30 cm). In contrast, both drought treatments significantly increased the BNC in the topsoil and subsoil. Our results suggested that the effects of drought on the microbial necromass of the subsoil were more pronounced than those of the topsoil. This study highlights the complex responses of microbial necromass to drought events depending on microbial community structure, drought intensity and soil depth with global implications when forecasting carbon cycling under climate change.


Subject(s)
Droughts , Soil , Carbon , Forests , Carbon Cycle , Soil Microbiology
2.
Cell Commun Signal ; 21(1): 176, 2023 07 21.
Article in English | MEDLINE | ID: mdl-37480055

ABSTRACT

Although antiangiogenic therapy has been used in gastric cancer, disease progression due to drug resistance remains common. Neutrophils play an important role in the occurrence and progression of cancer via neutrophil extracellular traps (NETs). However, few studies have investigated angiogenic regulation in gastric cancer. We aimed to determine the role of NETs in promoting angiogenesis in gastric cancer. Multiple immunohistochemical staining was used to analyze the spatial distribution of NETs and microvessels in patient tissue samples. A mouse subcutaneous tumor model was established to determine the effect of NETs on tumor growth, and changes in microvessel density were observed via immunohistochemical staining. We screened differentially expressed proteins in HUVECs stimulated by NETs via proteomics. Cell Counting Kit-8, EdU labeling, and tubule formation assays were used to verify the effect of NETs on HUVEC proliferation, migration, and tubule formation. Blocking NETs, which was related to decreased microvessel density, significantly inhibited tumor growth in the murine subcutaneous tumor model. Compared with those of the control group, tumor volume and mass among mice in the inhibition group decreased by 61.3% and 77.9%, respectively. The NET-DNA receptor CCDC25 was expressed in HUVECs, providing a platform for NETs to promote HUVEC proliferation, migration, and tubulation. In an in vitro rat aortic explant model, NETs induced HUVEC proliferation, survival, and chemotaxis, which were not significantly different from those observed in the VEGF stimulation group. Our results confirm that NETs promote angiogenesis in gastric cancer, providing a theoretical basis for identifying new anti-vascular therapeutic targets. Video Abstract.


Subject(s)
Extracellular Traps , Stomach Neoplasms , Animals , Mice , Rats , Neutrophils , Aorta , Biological Assay , Disease Models, Animal
3.
Molecules ; 29(1)2023 Dec 27.
Article in English | MEDLINE | ID: mdl-38202756

ABSTRACT

To improve the adsorption efficiency of pollutants by biochar, preparing graphene-like biochar (GBC) or nitrogen-doped biochar are two commonly used methods. However, the difference in the nitrogen doping (N-doping) effects upon the adsorption of pollutants by pristine biochar (PBC) and GBC, as well as the underlying mechanisms, are still unclear. Take the tetracycline (TC) as an example, the present study analyzed the characteristics of the adsorption of TCs on biochars (PBC, GBC, N-PBC, N-GBC), and significant differences in the effects of N-doping on the adsorption of TCs by PBC and GBC were consistently observed at different solution properties. Specifically, N-doping had varied effects on the adsorption performance of PBC, whereas it uniformly improved the adsorption performance of GBC. To interpret the phenomenon, the N-doping upon the adsorption was revealed by the QSAR model, which indicated that the pore filling (VM) and the interactions between TCs with biochars (Ead-v) were found to be the most important two factors. Furthermore, the density functional theory (DFT) results demonstrated that N-doping slightly affects biochar's chemical reactivity. The van der Waals (vdWs) and electrostatic interactions are the main forces for TCs-biochars interactions. Moreover, N-doping mostly strengthened the electrostatic interactions of TCs-biochars, but the vdWs interactions of most samples remained largely unaffected. Overall, the revealed mechanism of N-doping on TCs adsorption by biochars will enhance our knowledge of antibiotic pollution remediation.


Subject(s)
Charcoal , Environmental Pollutants , Graphite , Heterocyclic Compounds , Adsorption , Tetracycline , Anti-Bacterial Agents , Nitrogen , Transcription Factors
4.
Mol Cell Proteomics ; 19(4): 655-671, 2020 04.
Article in English | MEDLINE | ID: mdl-32102971

ABSTRACT

Protein phosphorylation cascades play a central role in the regulation of cell growth and protein kinases PKA, Sch9 and Ypk1 take center stage in regulating this process in S. cerevisiae To understand how these kinases co-ordinately regulate cellular functions we compared the phospho-proteome of exponentially growing cells without and with acute chemical inhibition of PKA, Sch9 and Ypk1. Sites hypo-phosphorylated upon PKA and Sch9 inhibition were preferentially located in RRxS/T-motifs suggesting that many are directly phosphorylated by these enzymes. Interestingly, when inhibiting Ypk1 we not only detected several hypo-phosphorylated sites in the previously reported RxRxxS/T-, but also in an RRxS/T-motif. Validation experiments revealed that neutral trehalase Nth1, a known PKA target, is additionally phosphorylated and activated downstream of Ypk1. Signaling through Ypk1 is therefore more closely related to PKA- and Sch9-signaling than previously appreciated and may perform functions previously only attributed to the latter kinases.


Subject(s)
Cyclic AMP-Dependent Protein Kinases/metabolism , Protein Serine-Threonine Kinases/metabolism , Saccharomyces cerevisiae Proteins/metabolism , Saccharomyces cerevisiae/enzymology , Saccharomyces cerevisiae/genetics , Amino Acid Motifs , Amino Acid Sequence , Consensus Sequence , Cyclic AMP-Dependent Protein Kinases/chemistry , Phosphorylation/drug effects , Protein Kinase Inhibitors/pharmacology , Protein Serine-Threonine Kinases/chemistry , Proteome/metabolism , Saccharomyces cerevisiae Proteins/chemistry , Trehalase/metabolism
5.
Int Heart J ; 63(3): 591-601, 2022.
Article in English | MEDLINE | ID: mdl-35650159

ABSTRACT

Circular RNAs (circRNAs) act as important regulators in myocardial infarction (MI). This study aimed to explore the regulatory mechanism of circRNA solute carrier family 8 member A1 antisense RNA 1 (circSLC8A1) in hypoxia-induced myocardial injury.Exosomes were isolated by ultracentrifugation and identified by microscopic observation or protein detection. Protein levels were examined by Western blot. CircSLC8A1, microRNA-214-5p (miR-214-5p), and TEA domain transcription factor 1 (TEAD1) levels were determined via quantitative real-time polymerase chain reaction (qRT-PCR). Cell viability and apoptosis were analyzed by 3-(4,5-dimethylthiazol-2-y1)-2,5-diphenyl tetrazolium bromide (MTT) and flow cytometry, respectively. Inflammatory cytokines were measured using enzyme-linked immunosorbent assay (ELISA). Oxidative stress was assessed by reactive oxygen species (ROS) production, malondialdehyde (MDA) level, and superoxide dismutase (SOD) activity through the corresponding detection kits. Target analysis was performed by dual-luciferase reporter assay, RNA immunoprecipitation (RIP) assay, and pull-down assay.Exosomes released circSLC8A1 from hypoxic cardiomyocytes. Exosomal circSLC8A1 exacerbated hypoxia-induced repression of cell viability but promotion of cell apoptosis, inflammation, and oxidative stress. Knockdown of circSLC8A1 ameliorated hypoxia-mediated cell injury. CircSLC8A1 directly targeted miR-214-5p and miR-214-5p downregulation reverted the effects of si-circSLC8A1 on hypoxia-treated cardiomyocytes. TEAD1 was a target of miR-214-5p and circSLC8A1 upregulated TEAD1 level via targeting miR-214-5p. In addition, miR-214-5p inhibited hypoxia-caused cell injury by downregulating the expression of TEAD1.These results suggested that circSLC8A1 aggravated cell damages in hypoxia-treated cardiomyocytes by the regulation of TEAD1 via sponging miR-214-5p.


Subject(s)
MicroRNAs , Myocytes, Cardiac , RNA, Circular , TEA Domain Transcription Factors , Cell Hypoxia , Down-Regulation , Humans , MicroRNAs/genetics , MicroRNAs/metabolism , Myocytes, Cardiac/pathology , RNA, Circular/genetics , Sodium-Calcium Exchanger , TEA Domain Transcription Factors/genetics
6.
Proc Natl Acad Sci U S A ; 115(20): 5187-5192, 2018 05 15.
Article in English | MEDLINE | ID: mdl-29717039

ABSTRACT

Anthropogenic nitrogen (N) deposition has accelerated terrestrial N cycling at regional and global scales, causing nutrient imbalance in many natural and seminatural ecosystems. How added N affects ecosystems where N is already abundant, and how plants acclimate to chronic N deposition in such circumstances, remains poorly understood. Here, we conducted an experiment employing a decade of N additions to examine ecosystem responses and plant acclimation to added N in an N-rich tropical forest. We found that N additions accelerated soil acidification and reduced biologically available cations (especially Ca and Mg) in soils, but plants maintained foliar nutrient supply at least in part by increasing transpiration while decreasing soil water leaching below the rooting zone. We suggest a hypothesis that cation-deficient plants can adjust to elevated N deposition by increasing transpiration and thereby maintaining nutrient balance. This result suggests that long-term elevated N deposition can alter hydrological cycling in N-rich forest ecosystems.


Subject(s)
Acclimatization , Ecosystem , Forests , Nitrogen/metabolism , Plant Physiological Phenomena , Plants/metabolism , Nitrogen/chemistry , Soil
7.
Ecotoxicol Environ Saf ; 192: 110289, 2020 Apr 01.
Article in English | MEDLINE | ID: mdl-32061990

ABSTRACT

Comparatively limited knowledge is known about the accumulation processes of tributyltin (TBT) and triphenyltin (TPT) in fish and aquatic plant in the freshwater environment, which has hindered a full understanding of their bioaccumulation potential and ecological risks. In the present study, sorption of TBT and TPT on dead biota of both carp and C. demersum from water via the batch equilibrium technique as well as uptake of them on live biota of both carp and C. demersum from water at a static and a dynamic kinetics tests were investigated, respectively. Both TBT and TPT exhibit a high affinity in carps and C. demersum. And C. demersum has a faster metabolism either for TBT or TPT than carp. The apparent uptake values (Cbio = 1904-8831 µg/kg) or bioconcentration factor (BCF = 3333-44000 L/kg) were one or two orders of magnitude higher than that of estimated by a simple sorption (405-472 µg/kg) or lipid model (74.5-149.6 µg/kg) for carp, indicating the uptake of TBT and TPT did not only depend on lipids but also oxygen ligands or macromolecules such as amino acids and proteins of the living organism. In contrast, the apparent Cbio values (149.1-926.4 µg/kg) of both TBT and TPT were lower than that of estimated by sorption model (1341-1902 µg/kg) for C. demersum, which were due to the rapid metabolic rate of them, especially for TBT. But no relation was observed between TBT and TPT concentrations and lipid contents in C. demersum.


Subject(s)
Organotin Compounds/pharmacokinetics , Trialkyltin Compounds/pharmacokinetics , Water Pollutants, Chemical/pharmacokinetics , Animals , Carps/metabolism , Kinetics , Magnoliopsida/metabolism
8.
Bull Environ Contam Toxicol ; 104(2): 282-287, 2020 Feb.
Article in English | MEDLINE | ID: mdl-31858152

ABSTRACT

This study involved the development of mathematical linear regression models to describe the relationships between mean plant biomass (M) and population density (D), M and frond diameter (L), frond numbers (N) and L of Lemna minor under different initial population densities (3200, 4450, and 6400 plants/m2), respectively, from the perspective of the self-thinning law. Our results revealed that the value of the allometric exponents for M and D were - 3/2. Further, the concentrations of Zn, Pb, Cu, Fe, and Ni accumulated in L. minor plants were 0.86, 0.32, 0.36, 0.62, and 0.39 mg/kg, respectively. Based on these developed equations and the heavy metal accumulations by L. minor, the phytoremediation capacity of L. minor was quantified via its frond diameters. Overall, the present study provides a cost-effective green method for managing the phytoremediation of heavy metal-contaminated aquatic environments.


Subject(s)
Araceae/physiology , Environmental Restoration and Remediation/methods , Metals, Heavy/metabolism , Water Pollutants, Chemical/metabolism , Araceae/metabolism , Bioaccumulation , Biodegradation, Environmental , Biomass , Plant Dispersal , Plant Leaves/metabolism , Plant Leaves/physiology
9.
Tumour Biol ; 37(6): 7881-91, 2016 Jun.
Article in English | MEDLINE | ID: mdl-26700666

ABSTRACT

Hypercoagulability in gastric cancer is a common complication and a major contributor to poor prognosis. This study aimed to determine procoagulant activity of blood cells and microparticles (MPs) in gastric cancer patients. Phosphatidylserine-positive blood cells and MPs, and their procoagulant properties in particular, were assessed in 48 gastric cancer patients and 35 healthy controls. Phosphatidylserine-positive platelets, leukocytes, and MPs in patients with tumor-node-metastasis stage III/IV gastric cancer were significantly higher than those in stage I/II patients or healthy controls. Moreover, procoagulant activity of platelets, leukocytes, and MPs in stage III/IV patients was significantly increased compared to the controls, as indicated by shorter clotting time, higher intrinsic and extrinsic factor tenase, and prothrombinase complex activity. Interestingly, lactadherin, which competes with factors V and VIII to bind phosphatidylserine, dramatically prolonged clotting time of the cells and MPs by inhibiting factor tenase and prothrombinase complex activity. Although anti-tissue factor antibody significantly attenuated extrinsic tenase complex activity of leukocytes and MPs, it only slightly prolonged clotting times. Meanwhile, treatment with radical resection reduced phosphatidylserine-positive platelets, leukocytes, and MPs, and prolonged the clotting times of the remaining cells and MPs. Our results suggest that phosphatidylserine-positive platelets, leukocytes, and MPs contribute to hypercoagulability and represent a potential therapeutic target to prevent coagulation in patients with stage III/IV gastric cancer.


Subject(s)
Blood Coagulation/physiology , Blood Platelets/metabolism , Cell-Derived Microparticles/metabolism , Leukocytes/metabolism , Phosphatidylserines/metabolism , Stomach Neoplasms/blood , Thrombophilia/etiology , Adult , Blood Platelets/physiology , Cell-Derived Microparticles/physiology , Female , Flow Cytometry , Humans , Leukocytes/physiology , Male , Middle Aged , Prospective Studies , Stomach Neoplasms/complications
10.
Glob Chang Biol ; 20(6): 1943-54, 2014 Jun.
Article in English | MEDLINE | ID: mdl-24293210

ABSTRACT

Increase of belowground C allocation by plants under global warming or elevated CO2 may promote decomposition of soil organic carbon (SOC) by priming and strongly affects SOC dynamics. The specific effects by priming of SOC depend on the amount and frequency of C inputs. Most previous priming studies have investigated single C additions, but they are not very representative for litterfall and root exudation in many terrestrial ecosystems. We evaluated effects of (13)C-labeled glucose added to soil in three temporal patterns: single, repeated, and continuous on dynamics of CO2 and priming of SOC decomposition over 6 months. Total and (13)C labeled CO2 were monitored to analyze priming dynamics and net C balance between SOC loss caused by priming and the retention of added glucose-C. Cumulative priming ranged from 1.3 to 5.5 mg C g(-1) SOC in the subtropical, and from -0.6 to 5.5 mg C g(-1) SOC in the tropical soils. Single addition induced more priming than repeated and continuous inputs. Therefore, single additions of high substrate amounts may overestimate priming effects over the short term. The amount of added glucose C remaining in soil after 6 months (subtropical: 8.1-11.2 mg C g(-1) SOC or 41-56% of added glucose; tropical: 8.7-15.0 mg C g(-1) SOC or 43-75% of glucose) was substantially higher than the net C loss due to SOC decomposition including priming effect. This overcompensation of C losses was highest with continuous inputs and lowest with single inputs. Therefore, raised labile organic C input to soils by higher plant productivity will increase SOC content even though priming accelerates decomposition of native SOC. Consequently, higher continuous input of C belowground by plants under warming or elevated CO2 can increase C stocks in soil despite accelerated C cycling by priming in soils.


Subject(s)
Carbon Cycle , Carbon Dioxide/metabolism , Forests , Soil/chemistry , China , Glucose/metabolism , Tropical Climate
11.
Water Sci Technol ; 70(12): 1992-7, 2014.
Article in English | MEDLINE | ID: mdl-25521135

ABSTRACT

Three conventional coalescence filters including walnut shells (WS), polystyrene resin particles (PR), and quartz sand (QS) were compared with bamboo charcoal (BC) to treat oily wastewater in a coalescence system process. The results showed the order of oil removal efficiency was QS>BC>WS>PR. To improve the oil removal efficiency of BC further, six types of modified BC were prepared. The results showed that the modified BC using silane coupling agent (SCA) significantly increased oil removal efficiency, but the other types (including the use of NaOH, HNO3, H2O2, FeCl3 and ultrasound) of modified BC exhibited nearly the same level of efficiency as that of pure BC. Infra-red, X-ray diffraction, scanning electron microscopy, and the contact angle for modified BC were measured to reveal the modified mechanism. It was found that the higher oil removal efficiency of the SCA-modified BC occurred due to the changed crystal structure of the BC and the increase in its surface hydrophobicity, which resulted in higher oil removal efficiency. Therefore, modified bamboo charcoal is an attractive filter candidate for oil removal in a coalescence system process.


Subject(s)
Bambusa/chemistry , Charcoal/chemistry , Oils/isolation & purification , Water Pollutants, Chemical/isolation & purification , Water Purification , Adsorption , Filtration , Hydrogen Peroxide , Wastewater , X-Ray Diffraction
12.
Water Sci Technol ; 69(7): 1534-40, 2014.
Article in English | MEDLINE | ID: mdl-24718347

ABSTRACT

Generally, biofilm-supporting carriers in biological contact oxidation processes are made from thermoplastic polymers, which cause potential ecological damage because of the low biodegradation and high accumulation in organisms. Thus, four bamboo-based fibers, bamboo primitive fiber, bamboo fiber, bamboo charcoal fiber (BBF) and bamboo charcoal-cotton blending fiber (BCBF), were used as carriers and compared with two commercial carriers (vinylon (VY) and polypropylene (PP)) in a biological contact oxidation process system with the goal to develop a biodegradable and sustainable biofilm medium. Under steady state conditions, pollutants (chemical oxygen demand and NH4(+)-N) in stage 1 (days 1-29, hydraulic retention time (HRT) = 12 h) were efficiently removed with a removal efficiency ranging from 85 to 95%. In stage 2 (days 30-53, HRT = 4-12 h), the pollutant-removal efficiency of four reactors (BBF, BCBF, VY and PP) were nearly indistinguishable and were higher than the two other reactors, especially when the HRT was set at 4 h (days 46-53). Consequently, two optimized bamboo-based fibers (BBF and BCBF) can be developed as biofilm carriers for wastewater treatment in the future. Furthermore, studies demonstrated that the biofilm development difference showed good correlation with their specific area and relative oxygen content but not with their tenacity and antimicrobial activity.


Subject(s)
Bambusa , Water Purification/instrumentation , Biofilms , Biological Oxygen Demand Analysis , Oxidation-Reduction
13.
J Hazard Mater ; 469: 134056, 2024 May 05.
Article in English | MEDLINE | ID: mdl-38522208

ABSTRACT

The extensive use of antidiabetic drugs (ADDs) and their detection in high concentrations in the environment have been extensively documented. However, the mechanism of ADDs dissipation in aquatic environments is still not well understood. This study thoroughly investigates the dissipation behavior of ADDs and the underlying mechanisms in the aerobic activated sludge system. The results indicate that the removal efficiencies of ADDs range from 3.98% to 100% within 48 h, largely due to the biodegradation process. Additionally, the gene expression of cytochrome P450 (CYP450) is shown to be significantly upregulated in most ADDs-polluted samples (P < 0.05), indicating the vital role of CYP450 enzymes in the biodegradation of ADDs. Enzyme inhibition experiments validated this hypothesis. Moreover, molecular docking and simulation results indicate that a strong correlation between the biodegradation of ADDs and the interactions between ADDs and CYP450 (Ebinding). The differences in dissipation behavior among the tested ADDs are possibly due to their electrophilic characteristics. Overall, this study makes the initial contribution to a more profound comprehension of the crucial function of CYP450 enzymes in the dissipation behavior of ADDs in a typical aquatic environment.


Subject(s)
Cytochrome P-450 Enzyme System , Sewage , Sewage/chemistry , Molecular Docking Simulation , Cytochrome P-450 Enzyme System/genetics , Cytochrome P-450 Enzyme System/metabolism , Biodegradation, Environmental
14.
Water Res ; 249: 120909, 2024 Feb 01.
Article in English | MEDLINE | ID: mdl-38006788

ABSTRACT

Sludge hydrolysate, the byproduct generated during sludge hydrothermal treatment (HT), is a potential carbon source for biological denitrification. However, the refractory organic matters and the nutrient substances are unfavorable to the nitrogen removal. In this study, effects of HT conditions on the hydrolysate properties, and the hydrolysate compositions optimization via red soil (RS) filtration were investigated. At HT temperature of 160-220 °C and reaction time of 1-4 h, the highest dissolution rate of organics from sludge to hydrolysate achieved 70.1 %, while the acetic acid dominated volatile fatty acids (VFAs) was no more than 5.0 % of the total organic matter content. The NH4+-N and dissolved organic nitrogen (DON) were the main nitrogen species in hydrolysate. When the hydrolysate was filtered by RS, the high molecular weight organic matters, DON, NH4+ and PO43- were effectively retained by RS, while VFAs and polysaccharide favorable for denitrification were kept in the filtrate. When providing same COD as the carbon source, the filtrate group (Fi-Group) introduced lower concentrations of TN and humic substances but higher content of VFAs. This resulted in TN removal rate (57.0 %) and denitrification efficiency (93.6 %) in Fi-Group higher than those in hydrolysate group (Hy-Group), 39.4 % and 83.7 %, respectively. It is noticeable that both Hy- and Fi- Groups up-regulated most of denitrification functional genes, and increased the richness and diversity of denitrifying bacteria. Also, more denitrifying bacteria genera appeared, and their relative abundance increased significantly from 3.31 % in Control to 21.15 % in Hy- Group and 31.31 % in Fi-Group. This indicates that the filtrate is a more suitable carbon source for denitrification than hydrolysate. Moreover, the pH rose from 4.6 ± 0.14 to 6.5 ± 0.05, and the organic carbon, TN, TP and cation exchange capacity (CEC) of RS increased as well after being filtered, implying that the trapped compounds may have the potential to improve soil quality. This study provides a new insight for hydrolysate application according to its composition characteristics, and helps make the most use of wasted sludge.


Subject(s)
Bioreactors , Sewage , Sewage/chemistry , Fermentation , Denitrification , Carbon , Soil , Bacteria , Fatty Acids, Volatile , Nitrogen
15.
Environ Monit Assess ; 185(6): 4513-27, 2013 Jun.
Article in English | MEDLINE | ID: mdl-23143826

ABSTRACT

As organisms are typically exposed to chemical mixtures over long periods of time, chronic mixture toxicity is the best way to perform an environmental risk assessment (ERA). However, it is difficult to obtain the chronic mixture toxicity data due to the high expense and the complexity of the data acquisition method. Therefore, an approach was proposed in this study to predict chronic mixture toxicity. The acute (15 min exposure) and chronic (24 h exposure) toxicity of eight antibiotics and trimethoprim to Vibrio fischeri were determined in both single and binary mixtures. The results indicated that the risk quotients (RQs) of antibiotics should be based on the chronic mixture toxicity. To predict the chronic mixture toxicity, a docking-based receptor library of antibiotics and the receptor-library-based quantitative structure-activity relationship (QSAR) model were developed. Application of the developed QSAR model to the ERA of antibiotic mixtures demonstrated that there was a close affinity between RQs based on the observed chronic toxicity and the corresponding RQs based on the predicted data. The average coefficients of variations were 46.26 and 34.93 % and the determination coefficients (R (2)) were 0.999 and 0.998 for the low concentration group and the high concentration group, respectively. This result convinced us that the receptor library would be a promising tool for predicting the chronic mixture toxicity of antibiotics and that it can be further applied in ERA.


Subject(s)
Anti-Bacterial Agents/toxicity , Environmental Pollutants/toxicity , Small Molecule Libraries , Toxicity Tests, Chronic/methods , Aliivibrio fischeri , Anti-Bacterial Agents/classification , Environmental Pollutants/classification , Quantitative Structure-Activity Relationship , Risk Assessment/methods
16.
Sci Total Environ ; 872: 162265, 2023 May 10.
Article in English | MEDLINE | ID: mdl-36801324

ABSTRACT

Antibiotic resistome has led to growing global threat to public health. Rare earth elements play important roles in modern society and mining activity for them has caused serious impact on soil ecosystems. However, antibiotic resistome in, especially, ion-adsorption rare earth-related soils is still poorly understood. In this work, soils were collected from ion-adsorption rare earth mining areas and adjacent regions of south China and metagenomic analysis was employed for profile, driving factors and ecological assembly of antibiotic resistome in the soils. Results show prevalence of antibiotic resistance genes conferring resistance to tetracycline/fluoroquinolone (adeF), peptide (bcrA), aminoglycoside (rpsL), tetracycline (tet(A)) and mupirocin (mupB) in ion-adsorption rare earth mining soils. Profile of antibiotic resistome is accompanied by its driving factors, i.e., physicochemical properties (La, Ce, Pr, Nd and Y of rare earth elements in 12.50-487.90 mg kg-1), taxonomy (Proteobacteria, Actinobacteria) and mobile genetic elements (MGEs, plasmid pYP1, Transposase_20). Variation partitioning analysis and partial least-squares-path modeling demonstrate that taxonomy is the most important individual contributor and pose most direct/indirect effect to antibiotic resistome. Further, null model analysis reveals stochastic processes as dominant ecological assembly of antibiotic resistome. This work advances our knowledge on antibiotic resistome with emphasis on ecological assembly in ion-adsorption rare earth-related soils for ARGs mitigation, mining management and mine restoration.


Subject(s)
Metals, Rare Earth , Soil , Anti-Bacterial Agents , Adsorption , Ecosystem , Genes, Bacterial , Tetracycline/analysis , China , Metals, Rare Earth/analysis , Mining
17.
Front Immunol ; 14: 1177604, 2023.
Article in English | MEDLINE | ID: mdl-37153547

ABSTRACT

Background: Neutrophil extracellular traps (NETs) are crucial in the progression of several cancers. The formation of NETs is closely related to reactive oxygen species (ROS), and the granule proteins involved in nucleosome depolymerization under the action of ROS together with the loosened DNA compose the basic structure of NETs. This study aims to investigate the specific mechanisms of NETs promoting gastric cancer metastasis in order to perfect the existing immunotherapy strategies. Methods: In this study, the cells and tumor tissues of gastric cancer were detected by immunological experiments, real-time polymerase chain reaction and cytology experiments. Besides, bioinformatics analysis was used to analyze the correlation between cyclooxygenase-2 (COX-2) and the immune microenvironment of gastric cancer, as well as its effect on immunotherapy. Results: Examination of clinical specimens showed that NETs were deposited in tumor tissues of patients with gastric cancer and their expression was significantly correlated with tumor staging. Bioinformatics analysis showed that COX-2 was involved in gastric cancer progression and was associated with immune cell infiltration as well as immunotherapy. In vitro experiments, we demonstrated that NETs could activate COX-2 through Toll-like receptor 2 (TLR2) and thus enhance the metastatic ability of gastric cancer cells. In addition, in a liver metastasis model of nude mice we also demonstrated the critical role of NETs and COX-2 in the distant metastasis of gastric cancer. Conclusion: NETs can promote gastric cancer metastasis by initiating COX-2 through TLR2, and COX-2 may become a target for gastric cancer immunotherapy.


Subject(s)
Extracellular Traps , Stomach Neoplasms , Animals , Mice , Cyclooxygenase 2/metabolism , Mice, Nude , Neutrophils , Reactive Oxygen Species/metabolism , Stomach Neoplasms/metabolism , Toll-Like Receptor 2/metabolism , Tumor Microenvironment , Humans
18.
Front Immunol ; 14: 1149989, 2023.
Article in English | MEDLINE | ID: mdl-36936929

ABSTRACT

Background: The epigenetic regulatory chemical lactate is a product of glycolysis. It can regulate gene expression through histone lactylation, thereby promoting tumor proliferation, metastasis, and immunosuppression. Methods: In this study, a lactylation-related model for gastric cancer (GC) was constructed, and its relationships to prognosis, immune cell infiltration, and immunotherapy were investigated. By contrasting normal tissues and tumor tissues, four lactylation-related pathways that were substantially expressed in GC tissues were found in the GSEA database. Six lactylation-related genes were screened for bioinformatic analysis. The GC data sets from the TCGA and GEO databases were downloaded and integrated to perform cluster analysis, and the lactylation related model was constructed by secondary clustering. Results: The fingding demonstrated that the lactylation score has a strong correlation with the overall survival rate from GC and the progression of GC. Mechanistic experiments showed that abundant immune cell infiltration (macrophages showed the highest degree of infiltration) and increased genetic instability are traits of high lactylation scores. Immune checkpoint inhibitors (ICIs) demonstrated a reduced response rate in GC with high lactylation scores. At the same time, tumors with high lactylation scores had high Tumor Immune Dysfunction and Exclusion scores, which means that they had a higher risk of immune evasion and dysfunction. Discussion: These findings indicate that the lactylation score can be used to predict the malignant progression and immune evasion of GC. This model also can guide the treatment response to ICIs of GC. The constructed model of the lactate gene is also expected to become a potential therapeutic target for GC and diagnostic marker.


Subject(s)
Stomach Neoplasms , Humans , Stomach Neoplasms/genetics , Stomach Neoplasms/therapy , Prognosis , Immunotherapy , Immunosuppression Therapy , Cluster Analysis
19.
Sci Total Environ ; 905: 167247, 2023 Dec 20.
Article in English | MEDLINE | ID: mdl-37739079

ABSTRACT

The effects of antibiotics on the proliferation of antibiotic resistant genes (ARGs) in WWTPs have drawn great attention in recent years. The effects of antibiotics on ARGs in the enhanced biological phosphorus removal (EBPR) system and its mechanisms, however, are still not well understood. In this study, EBPR systems were constructed using activated sludge to investigate the effects of ten commonly detected antibiotics in the environment on the proliferation of ARGs and the mechanisms involved. The results showed that the total abundance of ARGs increased to varying degrees with the addition of different antibiotics (0.05 mmol/L), and the top 30 ARGs increased by 271.1 % to 370.0 %. Mobile genetic elements (MGEs), functional modules, and the bacteria community were consistently related to the changes in ARGs. Refractory antibiotics, in particular, have a stronger promoting effect on transduction in the EBPR system. The insertion sequence common region (ISCR) and transposon (Tnp) were identified as crucial factors in the proliferation of ARGs. Moreover, the risk of polyphosphate accumulating organisms (PAOs) carrying ARGs in the presence of antibiotics should not be ignored. Our findings emphasize the potential efficacy of employing strategies that target the reduction of MGEs, regulation of cellular communication, and management of microbial communities to effectively mitigate the risks associated with ARGs.


Subject(s)
Anti-Bacterial Agents , Genes, Bacterial , Anti-Bacterial Agents/pharmacology , Drug Resistance, Microbial/genetics , Bacteria/genetics , Sewage/microbiology
20.
Macromol Biosci ; 23(12): e2300207, 2023 Dec.
Article in English | MEDLINE | ID: mdl-37534715

ABSTRACT

Engineering cardiac patches are proven to be effective in myocardial infarction (MI) repair, but it is still a tricky problem in tissue engineering to construct a scaffold with good biocompatibility, suitable mechanical properties, and solid structure. Herein, decellularized fish skin matrix is utilized with good biocompatibility to prepare a flexible conductive cardiac patch through polymerization of polydopamine (PDA) and polypyrrole (PPy). Compared with single modification, the double modification strategy facilitated the efficiency of pyrrole polymerization, so that the patch conductivity is improved. According to the results of experiments in vivo and in vitro, the scaffold can promote the maturation and functionalization of cardiomyocytes (CMs). It can also reduce the inflammatory response, increase local microcirculation, and reconstruct the conductive microenvironment in infarcted myocardia, thus improving the cardiac function of MI rats. In addition, the excellent flexibility of the scaffold, which enables it to be implanted in vivo through "folding-delivering-re-stretehing" pathway, provides the possibility of microoperation under endoscope, which avoids the secondary damage to myocardium by traditional thoracotomy for implantation surgery.


Subject(s)
Myocardial Infarction , Polymers , Rats , Animals , Polymers/chemistry , Pyrroles/chemistry , Myocardium , Myocardial Infarction/surgery , Myocytes, Cardiac , Tissue Engineering/methods , Tissue Scaffolds
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