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1.
Mol Cell ; 81(15): 3205-3215.e5, 2021 08 05.
Article in English | MEDLINE | ID: mdl-34314699

ABSTRACT

The ß3-adrenergic receptor (ß3AR) is predominantly expressed in adipose tissue and urinary bladder and has emerged as an attractive drug target for the treatment of type 2 diabetes, obesity, and overactive bladder (OAB). Here, we report the cryogenic electron microscopy structure of the ß3AR-Gs signaling complex with the selective agonist mirabegron, a first-in-class drug for OAB. Comparison of this structure with the previously reported ß1AR and ß2AR structures reveals a receptor activation mechanism upon mirabegron binding to the orthosteric site. Notably, the narrower exosite in ß3AR creates a perpendicular pocket for mirabegron. Mutational analyses suggest that a combination of both the exosite shape and the amino-acid-residue substitutions defines the drug selectivity of the ßAR agonists. Our findings provide a molecular basis for ßAR subtype selectivity, allowing the design of more-selective agents with fewer adverse effects.


Subject(s)
Acetanilides/chemistry , Adrenergic beta-3 Receptor Agonists/chemistry , Receptors, Adrenergic, beta-3/chemistry , Receptors, Adrenergic, beta-3/metabolism , Thiazoles/chemistry , Acetanilides/metabolism , Adrenergic beta-3 Receptor Agonists/metabolism , Animals , Binding Sites , Cryoelectron Microscopy , Dogs , Humans , Models, Molecular , Molecular Dynamics Simulation , Receptors, Adrenergic, beta-3/genetics , Thiazoles/metabolism
2.
Biodegradation ; 35(5): 583-599, 2024 Aug.
Article in English | MEDLINE | ID: mdl-38662140

ABSTRACT

Pretilachlor and safener fenclorim are the main components of herbicides widely applied to control weeds. Although some pure cultures of bacteria and fungi which degraded these compounds under aerobic conditions were isolated, no isolated pretilachlor- and fenclorim-degrading bacterial strains under anaerobic condition had been available. In this study, the degradation of these compounds and the effects of them on bacterial community structures were investigated under anaerobic conditions. The dissipation rates of pretilachlor and fenclorim in slurries were in the order: soil from paddy field ≈ sediment from river > sediment from mangrove. Moreover, three pretilachlor-degrading bacterial strains (Pseudomonas sp. Pr1, Proteiniclasticum sp. Pr2 and Paracoccus denitrificans Pr3) and two fenclorim-degrading strains (Dechloromonas sp. Fe1 and Ralstonia pickettii Fe2) isolated from a slurry of paddy soil utilized the substrates as sole carbon and energy sources under anaerobic conditions. The degradation of pure pretilachlor and fenclorim at various concentrations by corresponding mixed pure cultures followed the Michaelis-Menten model, with the maximum degradation was 3.10 ± 0.31 µM/day for pretilachlor, and 2.08 ± 0.18 µM/day for fenclorim. During the degradation, 2-chloro-N-(2,6-diethylphenyl) acetamide and 2,6-dimethylaniline were produced in pretilachlor degradation, and benzene was a product of fenclorim degradation. The synergistic degradation of both substrates by all isolated bacteria reduced the metabolites concentrations accumulated in media. This study provides valuable information on effects of pretilachlor and fenclorim on bacterial communities in soil and sediments, and degradation of these substrates by isolated bacteria under anaerobic condition.


Subject(s)
Acetanilides , Bacteria , Biodegradation, Environmental , Herbicides , Acetanilides/metabolism , Herbicides/metabolism , Anaerobiosis , Bacteria/metabolism , Soil Microbiology , Soil Pollutants/metabolism , Acetamides
3.
Int J Mol Sci ; 25(13)2024 Jul 07.
Article in English | MEDLINE | ID: mdl-39000575

ABSTRACT

The ß3-adrenoceptor agonist mirabegron is available for the treatment of storage symptoms of overactive bladder, including frequency, urgency, and incontinence. The off-target effects of mirabegron include binding to α1-adrenoceptors, which are central in the treatment of voiding symptoms. Here, we examined the structure-function relationships in the binding of mirabegron to a cryo-electron microscopy structure of α1A. The binding was simulated by docking mirabegron to a 3D structure of a human α1A-adrenoceptor (7YMH) using Autodock Vina. The simulations identified two binding states: slope orientation involving 10 positions and horizontal binding to the receptor surface involving 4 positions. No interactions occurred with positions constituting the α1A binding pocket, including Asp-106, Ser-188, or Phe-312, despite the positioning of the phenylethanolamine moiety in transmembrane regions close to the binding pocket by contact with Phe-288, -289, and Val-107. Contact with the unique positions of α1A included the transmembrane Met-292 during slope binding and exosite Phe-86 during horizontal binding. Exosite binding in slope orientation involved contact of the anilino part, rather than the aminothiazol end, to Ile-178, Ala-103, and Asn-179. In conclusion, contact with Met-292 and Phe-86, which are unique positions of α1A, accounts for mirabegron binding to α1A. Because of its lack of interactions with the binding pocket, mirabegron has lower affinity compared to α1A-blockers and no effects on voiding symptoms.


Subject(s)
Acetanilides , Adrenergic beta-3 Receptor Agonists , Molecular Docking Simulation , Protein Binding , Receptors, Adrenergic, alpha-1 , Thiazoles , Acetanilides/chemistry , Acetanilides/pharmacology , Acetanilides/metabolism , Thiazoles/chemistry , Thiazoles/pharmacology , Thiazoles/metabolism , Humans , Structure-Activity Relationship , Receptors, Adrenergic, alpha-1/metabolism , Receptors, Adrenergic, alpha-1/chemistry , Adrenergic beta-3 Receptor Agonists/pharmacology , Adrenergic beta-3 Receptor Agonists/chemistry , Adrenergic beta-3 Receptor Agonists/metabolism , Binding Sites , Ligands , Cryoelectron Microscopy
4.
Microb Cell Fact ; 20(1): 61, 2021 Mar 04.
Article in English | MEDLINE | ID: mdl-33663497

ABSTRACT

BACKGROUND: The chloroacetamide herbicides pretilachlor is an emerging pollutant. Due to the large amount of use, its presence in the environment threatens human health. However, the molecular mechanism of pretilachlor degradation remains unknown. RESULTS: Now, Rhodococcus sp. B2 was isolated from rice field and shown to degrade pretilachlor. The maximum pretilachlor degradation efficiency (86.1%) was observed at a culture time of 5 d, an initial substrate concentration 50 mg/L, pH 6.98, and 30.1 °C. One novel metabolite N-hydroxyethyl-2-chloro-N-(2, 6-diethyl-phenyl)-acetamide was identified by gas chromatography-mass spectrometry (GC-MS). Draft genome comparison demonstrated that a 32,147-bp DNA fragment, harboring gene cluster (EthRABCDB2), was absent from the mutant strain TB2 which could not degrade pretilachlor. The Eth gene cluster, encodes an AraC/XylS family transcriptional regulator (EthRB2), a ferredoxin reductase (EthAB2), a cytochrome P450 monooxygenase (EthBB2), a ferredoxin (EthCB2) and a 10-kDa protein of unknown function (EthDB2). Complementation with EthABCDB2 and EthABDB2, but not EthABCB2 in strain TB2 restored its ability to degrade chloroacetamide herbicides. Subsequently, codon optimization of EthABCDB2 was performed, after which the optimized components were separately expressed in Escherichia coli, and purified using Ni-affinity chromatography. A mixture of EthABCDB2 or EthABDB2 but not EthABCB2 catalyzed the N-dealkoxymethylation of alachlor, acetochlor, butachlor, and propisochlor and O-dealkylation of pretilachlor, revealing that EthDB2 acted as a ferredoxin in strain B2. EthABDB2 displayed maximal activity at 30 °C and pH 7.5. CONCLUSIONS: This is the first report of a P450 family oxygenase catalyzing the O-dealkylation and N-dealkoxymethylation of pretilachlor and propisochlor, respectively. And the results of the present study provide a microbial resource for the remediation of chloroacetamide herbicides-contaminated sites.


Subject(s)
Acetamides/metabolism , Acetanilides/metabolism , Cytochrome P-450 Enzyme System/metabolism , Herbicides/metabolism , Multifunctional Enzymes/metabolism , Rhodococcus/enzymology , Biodegradation, Environmental , Cytochrome P-450 Enzyme System/genetics , Dealkylation , Escherichia coli/genetics , Ferredoxins/metabolism , Genes, Bacterial , Genome, Bacterial , Kinetics , Multifunctional Enzymes/genetics , Multigene Family , Mutation , Open Reading Frames , Rhodococcus/classification , Rhodococcus/genetics , Rhodococcus/isolation & purification
5.
Bioorg Chem ; 107: 104525, 2021 02.
Article in English | MEDLINE | ID: mdl-33317840

ABSTRACT

Hunting small molecules as anti-inflammatory agents/drugs is an expanding and successful approach to treat several inflammatory diseases such as cancer, asthma, arthritis, and psoriasis. Besides other methods, inflammatory diseases can be treated by lipoxygenase inhibitors, which have a profound influence on the development and progression of inflammation. In the present study, a series of new N-alkyl/aralky/aryl derivatives (7a-o) of 2-(4-phenyl-5-(1-phenylcarbamoyl)piperidine-4H-1,2,4-triazol-3-ylthio)acetamide was synthesized and screened for their inhibitory potential against the enzyme 15-lipoxygenase. The simple precursor ethyl piperidine-4-carboxylate (a) was successively converted into phenylcarbamoyl derivative (1), hydrazide (2), semicarbazide (3) and N-phenylated 5-(1-phenylcarbamoyl)piperidine-1,2,4-triazole (4), then in combination with electrophiles (6a-o) through further multistep synthesis, final products (7a-o) were generated. All the synthesized compounds were characterized by FTIR, 1H, 13C NMR spectroscopy, EIMS, and HREIMS spectrometry. Almost all the synthesized compounds showed excellent inhibitory potential against the tested enzyme. Compounds 7c, 7f, 7d, and 7g displayed potent inhibitory potential (IC50 9.25 ± 0.26 to 21.82 ± 0.35 µM), followed by the compounds 7n, 7h, 7e, 7a, 7b, 7l, and 7o with IC50 values in the range of 24.56 ± 0.45 to 46.91 ± 0.57 µM. Compounds 7c, 7f, 7d exhibited 71.5 to 83.5% cellular viability by MTT assay compared with standard curcumin (76.9%) when assayed at 0.125 mM concentration. In silico ADME studies supported the drug-likeness of most of the molecules. In vitro inhibition studies were substantiated by molecular docking wherein the phenyl group attached to the triazole ring was making a π-δ interaction with Leu607. This work reveals the possibility of a synthetic approach of compounds in relation to lipoxygenase inhibition as potential lead compounds in drug discovery.


Subject(s)
Acetanilides/pharmacology , Lipoxygenase Inhibitors/pharmacology , Triazoles/pharmacology , Acetanilides/chemical synthesis , Acetanilides/metabolism , Acetanilides/pharmacokinetics , Arachidonate 15-Lipoxygenase/metabolism , Humans , Hydrogen Bonding , Lipoxygenase Inhibitors/chemical synthesis , Lipoxygenase Inhibitors/metabolism , Lipoxygenase Inhibitors/pharmacokinetics , Molecular Docking Simulation , Molecular Structure , Protein Binding , Soybean Proteins/antagonists & inhibitors , Soybean Proteins/metabolism , Glycine max/enzymology , Static Electricity , Structure-Activity Relationship , Triazoles/chemical synthesis , Triazoles/metabolism , Triazoles/pharmacokinetics
6.
Molecules ; 26(8)2021 Apr 12.
Article in English | MEDLINE | ID: mdl-33921487

ABSTRACT

LW6, an (aryloxyacetylamino)benzoic acid derivative, was recently identified to be an inhibitor of hypoxia-inducible factor-1α (HIF-1α), which is an attractive target for cancer therapeutics. Although LW6 is known to act by inhibiting the accumulation of HIF-1α, pharmacokinetics needs to be evaluated to assess its potential as an anti-tumor agent. Here, we investigated the plasma pharmacokinetics and metabolism of LW6 in mice. LW6 exhibited a small volume of distribution (0.5 ± 0.1 L/kg), and a short terminal half-life (0.6 ± 0.1 h). Following intravenous or oral administration, LW6 was rapidly converted to its active metabolite, (4-adamantan-1-yl-phenoxy)acetic acid (APA). Although LW6 was rapidly absorbed, its oral bioavailability, estimated using AUClast values, was low (1.7 ± 1.8%). It was slowly degraded in mouse liver microsomes (t1/2 > 1 h) and serum (t1/2 > 6 h). About 54% or 44.8% of LW6 was available systemically as APA in the mouse after a single intravenous or oral administration, respectively. Thus, our results indicated the need to simultaneously consider the active metabolite as well as the parent compound for successful evaluation during lead optimization.


Subject(s)
Acetanilides/pharmacology , Acetanilides/pharmacokinetics , Adamantane/analogs & derivatives , Hypoxia-Inducible Factor 1, alpha Subunit/antagonists & inhibitors , Acetanilides/blood , Acetanilides/metabolism , Adamantane/blood , Adamantane/metabolism , Adamantane/pharmacokinetics , Adamantane/pharmacology , Animals , Caco-2 Cells , Cell Membrane Permeability/drug effects , Humans , Hypoxia-Inducible Factor 1, alpha Subunit/metabolism , Injections, Intravenous , Male , Metabolome , Mice, Inbred ICR , Microsomes, Liver/drug effects , Microsomes, Liver/metabolism , Time Factors
7.
Molecules ; 26(7)2021 Mar 30.
Article in English | MEDLINE | ID: mdl-33808438

ABSTRACT

A novel HIF (hypoxia-inducible factor)-1α inhibitor, the (aryloxyacetylamino)benzoic acid derivative LW6, is an anticancer agent that inhibits the accumulation of HIF-1α. The aim of this study was to characterize and determine the structures of the metabolites of LW6 in ICR mice. Metabolite identification was performed using a predictive multiple reaction monitoring-information dependent acquisition-enhanced product ion (pMRM-IDA-EPI) method in negative ion mode on a hybrid triple quadrupole-linear ion trap mass spectrometer (QTRAP). A total of 12 metabolites were characterized based on their MS/MS spectra, and the retention times were compared with those of the parent compound. The metabolites were divided into five structural classes based on biotransformation reactions: amide hydrolysis, ester hydrolysis, mono-oxidation, glucuronidation, and a combination of these reactions. From this study, 2-(4-((3r,5r,7r)-adamantan-1-yl)phenoxy)acetic acid (APA, M7), the metabolite produced via amide hydrolysis, was found to be a major circulating metabolite of LW6 in mice. The results of this study can be used to improve the pharmacokinetic profile by lowering the clearance and increasing the exposure relative to LW6.


Subject(s)
Acetanilides , Adamantane/analogs & derivatives , Antineoplastic Agents , Hypoxia-Inducible Factor 1, alpha Subunit/antagonists & inhibitors , Acetanilides/blood , Acetanilides/metabolism , Acetanilides/pharmacokinetics , Adamantane/blood , Adamantane/metabolism , Adamantane/pharmacokinetics , Animals , Antineoplastic Agents/blood , Antineoplastic Agents/metabolism , Antineoplastic Agents/pharmacokinetics , Biotransformation , Male , Mice , Mice, Inbred ICR
8.
BMC Plant Biol ; 20(1): 100, 2020 Mar 06.
Article in English | MEDLINE | ID: mdl-32138670

ABSTRACT

BACKGROUND: Fenclorim (Fen) can effectively protect rice from pretilachlor (Pre) injury, but its effects on rice have not been formally evaluated; thus, the Fen mode of action for alleviating the phytotoxicity caused by Pre in rice is not clear. This study aimed to examine the biochemical and physiological effects of Fen on rice and to determine the changes induced by Fen at the transcriptome level. RESULT: The chlorophyll content of rice plants was significantly affected by Pre but not by Fen. The activity of oxidative stress enzymes showed that Fen did not elicit any changes in oxidative stress; however, it reduced lipid peroxidation and oxidative damage induced by Pre. Fen did not affect the uptake of Pre but did affect its persistence in rice. In a transcriptome experiment, Fen upregulated genes in a detoxification pathway. Overall, 25 genes related to detoxification were identified, including P450, GST, and GT. Moreover, qRT-PCR analysis showed that four P450 genes, CYP71Y83, CYP71K14, CYP734A2 and CYP71D55, and two GST genes, GSTU16 and GSTF5, were upregulated by Fen and/or Pre. CONCLUSION: Our work indicates that Fen acts in antioxidative defense in addition to enhancing the metabolism of herbicides in rice.


Subject(s)
Acetanilides/metabolism , Antioxidants/metabolism , Herbicides/metabolism , Oryza/drug effects , Pyrimidines/metabolism , Transcription, Genetic/drug effects , Genes, Plant/drug effects , Inactivation, Metabolic , Oryza/enzymology , Oryza/genetics , Oryza/physiology , Seedlings/enzymology , Transcriptome/drug effects
9.
Arch Microbiol ; 201(6): 737-746, 2019 Aug.
Article in English | MEDLINE | ID: mdl-30820617

ABSTRACT

Marine actinobacteria are less explored than their terrestrial counterparts as potential source of natural products. The present study was aimed to elucidate the bioactive potential of metabolites produced by marine-derived actinobacterial strain Streptomyces sp.SCA29 isolated from Havelock Island, Andaman and Nicobar Islands, India. The potential isolate SCA29 was identified as Streptomyces sp. by phenotypic, genotypic (16S-rRNA) and phylogenetic analyses. The crude bioactive compound was extracted using organic solvents. The compounds were subjected to separation and purification by column chromatography which yielded six fractions. Each fraction was assayed for inhibition of α-glucosidase and α-amylase enzymes, antagonistic activity against bacterial pathogens, and cytotoxic activity against various cell lines. The fraction F3c was considered to be highly active owing to its significant inhibition potential against α-glucosidase and α-amylase enzymes with IC50 values as 44.26 and 53.19 µg/mL, respectively. The active fraction showed antibacterial activity against test bacterial pathogens with the MIC value ranged from 3.90 to 31.25 µg/mL. The compound also exhibited concentration-dependent cytotoxicity on various cell lines without significant effect against human normal cells. The bioassay-guided fractionation of extract led to the identification of 4-methoxyacetanilide, an acetamide derivative. The structure of the bioactive compound was confirmed by HR-MS, NMR (1H and 13C) and FT-IR spectra, and by comparison with literature data.


Subject(s)
Acetanilides/isolation & purification , Acetanilides/pharmacology , Anti-Bacterial Agents/isolation & purification , Anti-Bacterial Agents/pharmacology , Enzyme Inhibitors/isolation & purification , Enzyme Inhibitors/pharmacology , Streptomyces/metabolism , Acetanilides/chemistry , Acetanilides/metabolism , Anti-Bacterial Agents/chemistry , Anti-Bacterial Agents/metabolism , Cell Line , DNA, Bacterial/genetics , Enzyme Inhibitors/chemistry , Enzyme Inhibitors/metabolism , Glycoside Hydrolase Inhibitors/chemistry , Glycoside Hydrolase Inhibitors/isolation & purification , Glycoside Hydrolase Inhibitors/metabolism , Glycoside Hydrolase Inhibitors/pharmacology , Humans , India , Phylogeny , RNA, Ribosomal, 16S/genetics , Spectroscopy, Fourier Transform Infrared , Streptomyces/classification , Streptomyces/genetics , Streptomyces/isolation & purification , alpha-Amylases/antagonists & inhibitors , alpha-Amylases/chemistry , alpha-Glucosidases/chemistry
10.
J Pharmacol Exp Ther ; 367(2): 252-259, 2018 11.
Article in English | MEDLINE | ID: mdl-30104323

ABSTRACT

Succinate, an intermediate metabolite of the Krebs cycle, can alter the metabolomics response to certain drugs and controls an array of molecular responses in the urothelium through activation of its receptor, G-protein coupled receptor 91 (GPR91). Mirabegron, a ß3-adrenergic receptor (ß3-AR) agonist used to treat overactive bladder syndrome (OAB), increases intracellular cAMP in the detrusor smooth muscle cells (SMC), leading to relaxation. We have previously shown that succinate inhibits forskolin-stimulated cAMP production in urothelium. To determine whether succinate interferes with mirabegron-mediated bladder relaxation, we examined their individual and synergistic effect in urothelial-cell and SMC signaling. We first confirmed ß3-AR involvement in the mirabegron response by quantifying receptor abundance by immunoblotting in cultured urothelial cells and SMC and cellular localization by immunohistochemistry in rat bladder tissue. Mirabegron increased cAMP levels in SMC but not in urothelial cells, an increase that was inhibited by succinate, suggesting that it impairs cAMP-mediated bladder relaxation by mirabegron. Succinate and mirabegron increased inducible nitric oxide synthesis and nitric oxide secretion only in urothelial cells, suggesting that its release can indirectly induces SMC relaxation. Succinate exposure decreased the expression of ß3-AR protein in whole bladder in vivo and in SMC in vitro, indicating that this metabolite may lead to impaired pharmacodynamics of the bladder. Together, our results demonstrate that increased levels of succinate in settings of metabolic stress (e.g., the metabolic syndrome) may lead to impaired mirabegron and ß3-AR interaction, inhibition of cAMP production, and ultimately requiring mirabegron dose adjustment for its treatment of OAB related to these conditions.


Subject(s)
Myocytes, Smooth Muscle/metabolism , Receptors, Adrenergic, beta-3/metabolism , Signal Transduction/physiology , Succinic Acid/metabolism , Urothelium/metabolism , Acetanilides/metabolism , Animals , Cyclic AMP/metabolism , Female , Metabolic Syndrome/metabolism , Muscle Relaxation/physiology , Muscle, Smooth/metabolism , Nitric Oxide/metabolism , Nitric Oxide Synthase Type II/metabolism , Rats , Thiazoles/metabolism , Urinary Bladder/metabolism , Urinary Bladder, Overactive/metabolism
11.
Int J Mol Sci ; 17(7)2016 Jul 01.
Article in English | MEDLINE | ID: mdl-27376283

ABSTRACT

Breast cancer is one of the most lethal types of cancer in women worldwide due to the late stage detection and resistance to traditional chemotherapy. The human epidermal growth factor receptor 2 (HER2) is considered as a validated target in breast cancer therapy. Even though a substantial effort has been made to develop HER2 inhibitors, only lapatinib has been approved by the U.S. Food and Drug Administration (FDA). Side effects were observed in a majority of the patients within one year of treatment initiation. Here, we took advantage of bioinformatics tools to identify novel effective HER2 inhibitors. The structure-based virtual screening combined with ADMET (absorption, distribution, metabolism, excretion and toxicity) prediction was explored. In total, 11,247 natural compounds were screened. The top hits were evaluated by an in vitro HER2 kinase inhibition assay. The cell proliferation inhibition effect of identified inhibitors was evaluated in HER2-overexpressing SKBR3 and BT474 cell lines. We found that ZINC15122021 showed favorable ADMET properties and attained high binding affinity against HER2. Moreover, ZINC15122021 showed high kinase inhibition activity against HER2 and presented outstanding cell proliferation inhibition activity against both SKBR3 and BT474 cell lines. Results reveal that ZINC15122021 can be a potential HER2 inhibitor.


Subject(s)
Biological Products/pharmacology , Cell Proliferation/drug effects , Receptor, ErbB-2/antagonists & inhibitors , Acetanilides/metabolism , Acetanilides/pharmacokinetics , Acetanilides/pharmacology , Area Under Curve , Binding Sites , Biological Products/metabolism , Biological Products/pharmacokinetics , Breast Neoplasms/metabolism , Breast Neoplasms/pathology , Cell Line, Tumor , Cell Survival/drug effects , Female , Half-Life , Humans , Lapatinib , Molecular Docking Simulation , Protein Kinase Inhibitors/pharmacokinetics , Protein Kinase Inhibitors/pharmacology , Protein Structure, Tertiary , Quinazolines/metabolism , Quinazolines/pharmacokinetics , ROC Curve , Receptor, ErbB-2/metabolism , Thiazolidinediones/metabolism , Thiazolidinediones/pharmacokinetics , Thiazolidinediones/pharmacology
12.
J Nutr ; 144(7): 1016-22, 2014 Jul.
Article in English | MEDLINE | ID: mdl-24812068

ABSTRACT

The bioavailability of whole-grain rye-derived phytochemicals has not yet been comprehensively characterized, and different baking and manufacturing processes can modulate the phytochemical composition of breads and other rye products. The aim of our study was to find key differences in the phytochemical profile of plasma after the consumption of 3 breads containing rye bran when compared with a plain white wheat bread control. Plasma metabolite profiles of 12 healthy middle-aged men and women were analyzed using LC quadrupole time-of-flight mass spectrometry metabolomics analysis while fasting and at 60 min, 120 min, 240 min, and 24 h after consuming a meal that contained either 100% whole-grain sourdough rye bread or white wheat bread enriched with native unprocessed rye bran or bioprocessed rye bran. White wheat bread was used as the control. The meals were served in random order after a 12-h overnight fast, with at least 3 d between each occasion. Two sulfonated phenylacetamides, hydroxy-N-(2-hydroxyphenyl) acetamide and N-(2-hydroxyphenyl) acetamide, potentially derived from the benzoxazinoid metabolites, were among the most discriminant postprandial plasma biomarkers distinguishing intake of breads containing whole-meal rye or rye bran from the control white wheat bread. Furthermore, subsequent metabolite profiling analysis of the consumed breads indicated that different bioprocessing/baking techniques involving exposure to microbial metabolism (e.g., sourdough fermentation) have a central role in modulating the phytochemical content of the whole-grain and bran-rich breads.


Subject(s)
Acetanilides/blood , Benzoxazines/metabolism , Bread , Dietary Fiber/metabolism , Flour , Secale/chemistry , Seeds/chemistry , Acetanilides/metabolism , Aged , Bread/microbiology , Dietary Fiber/analysis , Female , Fermentation , Finland , Food Handling , Food, Fortified/microbiology , Humans , Hydroxylation , Lactobacillus/metabolism , Male , Middle Aged , Postprandial Period , Saccharomyces cerevisiae/metabolism , Sulfates/blood , Sulfates/metabolism , Sulfonic Acids/blood , Sulfonic Acids/metabolism
13.
Fish Shellfish Immunol ; 39(2): 254-62, 2014 Aug.
Article in English | MEDLINE | ID: mdl-24811006

ABSTRACT

Bivalves naturally exposed to toxic algae have mechanisms to prevent from harmful effects of diarrhetic shellfish poisoning (DSP) toxins. However, quite few studies have examined the mechanisms associated, and the information currently available is still insufficient. Multixenobiotic resistance (MXR) is ubiquitous in aquatic invertebrates and plays an important role in defense against xenobiotics. Here, to explore the roles of P-glycoprotein (P-gp) in the DSP toxins resistance in shellfish, complete cDNA of P-gp gene in the mussel Perna viridis was cloned and analyzed. The accumulation of okadaic acid (OA), a main component of DSP toxins, MXR activity and expression of P-gp in gills of P. viridis were detected after exposure to Prorocentrum lima, a dinoflagellate producing DSP toxins in the presence or absence of P-gp inhibitors PGP-4008, verapamil (VER) and cyclosporin A (CsA). The mussel P. viridis P-gp closely matches MDR/P-gp/ABCB protein from various organisms, having a typical sequence organization as full transporters from the ABCB family. After exposure to P. lima, OA accumulation, MXR activity and P-gp expression significantly increased in gills of P. viridis. The addition of P-gp-specific inhibitors PGP-4008 and VER decreased MXR activity induced by P. lima, but had no effect on the OA accumulation in gills of P. viridis. However, CsA, a broad-spectrum inhibitor of ABC transporter not only decreased MXR activity, but also increased OA accumulation in gills of P. viridis. Together with the ubiquitous presence of other ABC transporters such as MRP/ABCC in bivalves and potential compensatory mechanism in P-gp and MRP-mediated resistance, we speculated that besides P-gp, other ABC transporters, especially MRP might be involved in the resistance mechanisms to DSP toxins.


Subject(s)
ATP Binding Cassette Transporter, Subfamily B, Member 1/immunology , Dinoflagellida/immunology , Marine Toxins/immunology , Perna/immunology , ATP Binding Cassette Transporter, Subfamily B, Member 1/genetics , ATP Binding Cassette Transporter, Subfamily B, Member 1/metabolism , Acetanilides/metabolism , Animals , Base Sequence , Blotting, Western , Cloning, Molecular , Cyclosporine/metabolism , DNA Primers/genetics , DNA, Complementary/genetics , Dinoflagellida/chemistry , Gills/metabolism , Molecular Sequence Data , Okadaic Acid/metabolism , Perna/metabolism , Pyrroles/metabolism , Quinolines/metabolism , Real-Time Polymerase Chain Reaction , Reverse Transcriptase Polymerase Chain Reaction , Sequence Analysis, DNA , Verapamil/metabolism
14.
Bioorg Med Chem ; 22(15): 4083-98, 2014 Aug 01.
Article in English | MEDLINE | ID: mdl-25027801

ABSTRACT

Hsp90 isoform-selective inhibition is highly desired as it can potentially avoid the toxic side-effects of pan-inhibition. The current study developed selective inhibitors of one such isoform, Grp94, predicated on the chimeric and pan-Hsp90 inhibitor, radamide (RDA). Replacement of the quinone moiety of RDA with a phenyl ring (2) was found to be better suited for Grp94 inhibition as it can fully interact with a unique hydrophobic pocket present in Grp94. An extensive SAR for this scaffold showed that substitutions at the 2- and 4-positions (8 and 27, respectively) manifested excellent Grp94 affinity and selectivity. Introduction of heteroatoms into the ring also proved beneficial, with a 2-pyridine derivative (38) exhibiting the highest Grp94 affinity (K(d)=820 nM). Subsequent cell-based assays showed that these Grp94 inhibitors inhibit migration of the metastatic breast cancer cell line, MDA-MB-231, as well as exhibit an anti-proliferative affect against the multiple myeloma cell line, RPMI 8226.


Subject(s)
Acetanilides/chemistry , Benzoates/chemistry , HSP70 Heat-Shock Proteins/antagonists & inhibitors , Membrane Proteins/antagonists & inhibitors , Acetanilides/metabolism , Acetanilides/pharmacology , Benzoates/metabolism , Benzoates/pharmacology , Cell Line, Tumor , Cell Movement/drug effects , Cell Proliferation/drug effects , Fluorescence Polarization , HSP70 Heat-Shock Proteins/metabolism , Humans , Isomerism , Kinetics , Membrane Proteins/metabolism , Protein Binding , Structure-Activity Relationship
15.
Lett Appl Microbiol ; 59(1): 35-42, 2014 Jul.
Article in English | MEDLINE | ID: mdl-24605783

ABSTRACT

UNLABELLED: Owing to acetochlor persistence in the environment and its perceptible threats to the ecosystem and human health, it is urgent to search for effective approaches to decontaminate acetochlor. In this study, an acetochlor-degrading enrichment culture was obtained by continuous enrichment from acetochlor-contaminated soil and named T3. T3 could completely degrade 100 mg l(-1) acetochlor and butachlor within 6 days. Two bacterial strains Rhodococcus sp.T3-1 and Delftia sp.T3-6 and one strain Sphingobium sp.MEA3-1 were isolated and identified from T3 by using acetochlor and MEA as sole carbon source, respectively. These three bacteria could completely mineralize acetochlor by the cooperative metabolism. The biochemical pathway of acetochlor degradation by these three bacteria in a consortium was proposed: acetochlor to 2'-methyl-6'-ethyl-2-chloroacetanilide (CMEPA) by Rhodococcus sp. T3-1, CMEPA to 2-methyl-6-ethyl aniline (MEA) by Delftia sp.T3-6 and MEA by Sphingobium sp.MEA3-1 based on the identified degradation intermediates. Under laboratory conditions, the consortium was effective in the acetochlor mineralization. SIGNIFICANCE AND IMPACT OF THE STUDY: This study presents a bacterial consortium consisting of Rhodococcus sp.T3-1, Delftia sp.T3-6 and Sphingobium sp.MEA3-1 could completely mineralize acetochlor by biochemical cooperation. The study reveals the metabolic mechanism of acetochlor biodegradation and highlights the potential of the bacterial consortium for cleaning up acetochlor and its metabolites subsisting in the environment.


Subject(s)
Delftia/metabolism , Rhodococcus/metabolism , Soil Pollutants/metabolism , Sphingomonadaceae/metabolism , Toluidines/metabolism , Acetanilides/metabolism , Aniline Compounds/metabolism , Biodegradation, Environmental , Ecosystem , Herbicides/metabolism , Humans , Molecular Sequence Data , Molecular Typing , Phylogeny , RNA, Ribosomal, 16S/genetics , Rhodococcus/genetics , Soil Microbiology , Sphingomonadaceae/genetics
16.
Genetika ; 50(10): 1145-53, 2014 Oct.
Article in Russian | MEDLINE | ID: mdl-25720247

ABSTRACT

A new aliphatic amidase gene (ami), having a level of similarity with the nearest homologs of no more than 77%, was identified in the Rhodococcus erythropolis TA37 strain, which is able to hydrolyze a wide range of amides. The amidase gene was cloned within a 3.7 kb chromosomal locus, which also contains putative acetyl-CoA ligase and ABC-type transportergenes. The structure of this locus in the R. erythropolis TA37 strain differs from the structure of loci in other Rhodococcus strains. The amidase gene is expressed in Escherichia coli cells. It was demonstrated that amidase (generated in the recombinant strain) efficiently hydrolyzes acetamide (aliphatic anmide) and does not use 4'-nitroacetanilide (N-substituted amide) as a substrate. Insertional inactivation of the amidase gene in the R. erythropolis TA37 strain results in a considerable decrease (by at least 6-7 times) in basal amidase activity, indicating functional amidase activity in the R. erythropolis TA37 strain.


Subject(s)
Amidohydrolases/genetics , Bacterial Proteins/genetics , Rhodococcus/genetics , ATP-Binding Cassette Transporters/genetics , Acetamides/metabolism , Acetanilides/metabolism , Amidohydrolases/metabolism , Amino Acid Sequence , Bacterial Proteins/metabolism , Base Sequence , Cloning, Molecular , Coenzyme A Ligases/genetics , Genes, Bacterial , Molecular Sequence Data , Rhodococcus/enzymology , Substrate Specificity
17.
Biodegradation ; 24(1): 47-56, 2013 Feb.
Article in English | MEDLINE | ID: mdl-22618300

ABSTRACT

Rhodococcus sp. BX2 degrades bensulfuron-methyl but not butachlor, and Acinetobacter sp. LYC-1 degrades butachlor but not bensulfuron-methyl. Functional strains were constructed through protoplast fusion of Rhodococcus sp. BX2 and Acinetobacter sp. LYC-1 to generate fusants with an improved ability to simultaneously degrade bensulfuron-methyl and butachlor. Initial identification and stability tests of the fusants were performed. Three fusants with eighth transfer on plates containing two antibiotics and two herbicides were obtained. F1 also grew well in an inorganic salt solution containing bensulfuron-methyl and butachlor. F1 was characterized by its parents' morphological and physio-biochemical features. F1 not only had bands in common with BX2 and LYC-1, but also had its own specific bands analyzed by Random Amplified Polymorphic DNA. The genetic similarity indices between F1 and BX2 and F1 and LYC-1 were 0.507 and 0.470, respectively. The percentages bensulfuron-methyl and butachlor degradation by F1 in an inorganic salt solution supplemented with 100 mg/L bensulfuron-methyl and 100 mg/L butachlor were 65.35 and 62.41 %, respectively, and the percentages in soil contaminated with 10 mg/kg bensulfuron-methyl and 10 mg/kg butachlor with an inoculum size of 5 % at 34 °C and at a pH of 7.5 after 35 days were 63.74 and 61.53 %, respectively. It was demonstrated that F1 could simultaneously degrade bensulfuron-methyl and butachlor.


Subject(s)
Acetanilides/metabolism , Acinetobacter/metabolism , Herbicides/metabolism , Rhodococcus/metabolism , Sulfonylurea Compounds/metabolism , Acinetobacter/genetics , Biodegradation, Environmental , Rhodococcus/genetics
18.
Nat Commun ; 14(1): 7610, 2023 Nov 22.
Article in English | MEDLINE | ID: mdl-37993438

ABSTRACT

Metabolic reprogramming in malignant cells is a hallmark of cancer that relies on augmented glycolytic metabolism to support their growth, invasion, and metastasis. However, the impact of global adipose metabolism on tumor growth and the drug development by targeting adipose metabolism remain largely unexplored. Here we show that a therapeutic paradigm of drugs is effective for treating various cancer types by browning adipose tissues. Mirabegron, a clinically available drug for overactive bladders, displays potent anticancer effects in various animal cancer models, including untreatable cancers such as pancreatic ductal adenocarcinoma and hepatocellular carcinoma, via the browning of adipose tissues. Genetic deletion of the uncoupling protein 1, a key thermogenic protein in adipose tissues, ablates the anticancer effect. Similarly, the removal of brown adipose tissue, which is responsible for non-shivering thermogenesis, attenuates the anticancer activity of mirabegron. These findings demonstrate that mirabegron represents a paradigm of anticancer drugs with a distinct mechanism for the effective treatment of multiple cancers.


Subject(s)
Adipose Tissue, White , Neoplasms , Animals , Adipose Tissue, White/metabolism , Adipose Tissue, Brown/metabolism , Acetanilides/pharmacology , Acetanilides/metabolism , Energy Metabolism , Thermogenesis , Neoplasms/metabolism , Uncoupling Protein 1/genetics , Uncoupling Protein 1/metabolism
19.
Drug Metab Dispos ; 40(4): 815-24, 2012 Apr.
Article in English | MEDLINE | ID: mdl-22269146

ABSTRACT

The mass balance and metabolite profiles of 2-(2-amino-1,3-thiazol-4-yl)-N-[4-(2-{[(2R)-2-hydroxy-2-phenylethyl]amino}ethyl)[U-(14)C]phenyl]acetamide ([(14)C]mirabegron, YM178), a ß(3)-adrenoceptor agonist for the treatment of overactive bladder, were characterized in four young, healthy, fasted male subjects after a single oral dose of [(14)C]mirabegron (160 mg, 1.85 MBq) in a solution. [(14)C]Mirabegron was rapidly absorbed with a plasma t(max) for mirabegron and total radioactivity of 1.0 and 2.3 h postdose, respectively. Unchanged mirabegron was the most abundant component of radioactivity, accounting for approximately 22% of circulating radioactivity in plasma. Mean recovery in urine and feces amounted to 55 and 34%, respectively. No radioactivity was detected in expired air. The main component of radioactivity in urine was unchanged mirabegron, which accounted for 45% of the excreted radioactivity. A total of 10 metabolites were found in urine. On the basis of the metabolites found in urine, major primary metabolic reactions of mirabegron were estimated to be amide hydrolysis (M5, M16, and M17), accounting for 48% of the identified metabolites in urine, followed by glucuronidation (M11, M12, M13, and M14) and N-dealkylation or oxidation of the secondary amine (M8, M9, and M15), accounting for 34 and 18% of the identified metabolites, respectively. In feces, the radioactivity was recovered almost entirely as the unchanged form. Eight of the metabolites characterized in urine were also observed in plasma. These findings indicate that mirabegron, administered as a solution, is rapidly absorbed after oral administration, circulates in plasma as the unchanged form and metabolites, and is recovered in urine and feces mainly as the unchanged form.


Subject(s)
Acetanilides/pharmacokinetics , Adrenergic beta-3 Receptor Agonists/pharmacokinetics , Receptors, Adrenergic, beta-3/metabolism , Thiazoles/pharmacokinetics , Absorption , Acetanilides/administration & dosage , Acetanilides/blood , Acetanilides/metabolism , Acetanilides/urine , Administration, Oral , Adrenergic beta-3 Receptor Agonists/administration & dosage , Adrenergic beta-3 Receptor Agonists/blood , Adrenergic beta-3 Receptor Agonists/metabolism , Adrenergic beta-3 Receptor Agonists/urine , Adult , Carbon Radioisotopes , Chromatography, High Pressure Liquid , Dose-Response Relationship, Drug , Feces/chemistry , Humans , Male , Mass Spectrometry , Metabolic Clearance Rate , Molecular Structure , Thiazoles/administration & dosage , Thiazoles/blood , Thiazoles/metabolism , Thiazoles/urine , Young Adult
20.
Xenobiotica ; 42(10): 957-67, 2012 Oct.
Article in English | MEDLINE | ID: mdl-22509825

ABSTRACT

1. Human cytochrome P450 (CYP) enzymes and esterases involved in the metabolism of mirabegron, a potent and selective human ß(3)-adrenoceptor agonist intended for the treatment of overactive bladder, were identified in in vitro studies. 2. Incubations of mirabegron with recombinant human CYP enzymes showed significant metabolism of mirabegron by CYP2D6 and CYP3A4 only. Correlation analyses showed a significant correlation between mirabegron metabolism and testosterone 6ß-hydroxylation (CYP3A4/5 marker activity). In inhibition studies using antiserum against CYP3A4, a strong inhibition (at maximum 80% inhibition) of the metabolism of mirabegron was observed, whereas the inhibitory effects of monoclonal antibodies against CYP2D6 were small (at maximum 10% inhibition). These findings suggest that CYP3A4 is the primary CYP enzyme responsible for in vitro oxidative metabolism of mirabegron, with a minor role of CYP2D6. 3. Mirabegron hydrolysis was catalyzed in human blood, plasma and butyrylcholinesterase (BChE) solution, but not in human liver microsomes, intestinal microsomes, liver S9, intestinal S9 and recombinant acetylcholinesterase solution. K(m) values of mirabegron hydrolysis in human blood, plasma and BChE solution were all similar (13.4-15.2 µM). The inhibition profiles in human blood and plasma were also similar to those in BChE solution, suggesting that mirabegron hydrolysis is catalyzed by BChE.


Subject(s)
Acetanilides/metabolism , Adrenergic beta-3 Receptor Agonists/metabolism , Cytochrome P-450 Enzyme System/metabolism , Esterases/metabolism , Receptors, Adrenergic, beta-3/metabolism , Thiazoles/metabolism , Acetanilides/blood , Acetanilides/chemistry , Acetylcholinesterase/metabolism , Adrenergic beta-3 Receptor Agonists/blood , Adrenergic beta-3 Receptor Agonists/chemistry , Antibodies, Monoclonal/pharmacology , Butyrylcholinesterase/metabolism , Cytochrome P-450 CYP2D6/metabolism , Cytochrome P-450 CYP2D6 Inhibitors , Cytochrome P-450 CYP3A/metabolism , Cytochrome P-450 CYP3A Inhibitors , Cytochrome P-450 Enzyme Inhibitors , DNA, Complementary/genetics , Esterases/antagonists & inhibitors , Female , Humans , Hydrolysis/drug effects , Immune Sera/metabolism , Isoenzymes/antagonists & inhibitors , Isoenzymes/metabolism , Kinetics , Liver/drug effects , Liver/metabolism , Male , Microsomes, Liver/drug effects , Microsomes, Liver/enzymology , Oxygenases/metabolism , Recombinant Proteins/metabolism , Solutions , Thiazoles/blood , Thiazoles/chemistry
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