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1.
J Biol Chem ; 298(10): 102434, 2022 10.
Article in English | MEDLINE | ID: mdl-36041632

ABSTRACT

Transcription dysregulation is common in sarcomas driven by oncogenic transcription factors. Clear cell sarcoma of soft tissue (CCSST) is a rare sarcoma with poor prognosis presently with no therapy. It is characterized by a balanced t(12;22) (q13;q12) chromosomal translocation, resulting in a fusion of the Ewing's sarcoma gene EWSR1 with activating transcription factor 1 (ATF1) to give an oncogene EWSR1-ATF1. Unlike normal ATF1, whose transcription activity is dependent on phosphorylation, EWSR1-ATF1 is constitutively active to drive ATF1-dependent gene transcription to cause tumorigenesis. No EWSR1-ATF1-targeted therapies have been identified due to the challenges in targeting intracellular transcription factors. Through proteomics screening to identify potential druggable targets for CCSST, we discovered protein arginine methyltransferase 5 (PRMT5) as a novel protein to interact with EWSR1-ATF1. PRMT5 is a type II protein arginine methyltransferase to symmetrically dimethylate arginine residues in substrate proteins to regulate a diverse range of activities including gene transcription, RNA splicing, and DNA repair. We found that PRMT5 enhances EWSR1-ATF1-mediated gene transcription to sustain CCSST cell proliferation. Genetic silencing of PRMT5 in CCSST cells resulted in severely impaired cell proliferation and EWSR1-ATF1-driven transcription. Furthermore, we demonstrate that the clinical-stage PRMT5 inhibitor JNJ-64619178 potently and efficaciously inhibited CCSST cell growth in vitro and in vivo. These results provide new insights into PRMT5 as a transcription regulator and warrant JNJ-64619178 for further clinical development to treat CCSST patients.


Subject(s)
Activating Transcription Factor 1 , Oncogene Proteins, Fusion , Protein-Arginine N-Methyltransferases , RNA-Binding Protein EWS , Sarcoma, Clear Cell , Soft Tissue Neoplasms , Humans , Activating Transcription Factor 1/genetics , Cyclic AMP Response Element-Binding Protein/metabolism , Oncogene Proteins, Fusion/genetics , Oncogene Proteins, Fusion/metabolism , Protein-Arginine N-Methyltransferases/genetics , Protein-Arginine N-Methyltransferases/metabolism , Proteins/metabolism , RNA-Binding Protein EWS/genetics , RNA-Binding Protein EWS/metabolism , Sarcoma, Clear Cell/genetics , Sarcoma, Clear Cell/metabolism , Soft Tissue Neoplasms/genetics , Soft Tissue Neoplasms/metabolism , Transcription, Genetic , Gene Expression Regulation, Neoplastic
2.
Br J Cancer ; 128(10): 1941-1954, 2023 05.
Article in English | MEDLINE | ID: mdl-36959380

ABSTRACT

BACKGROUND: Systemic therapy for metastatic clear cell sarcoma (CCS) bearing EWSR1-CREB1/ATF1 fusions remains an unmet clinical need in children, adolescents, and young adults. METHODS: To identify key signaling pathway vulnerabilities in CCS, a multi-pronged approach was taken: (i) genomic and transcriptomic landscape analysis, (ii) integrated chemical biology interrogations, (iii) development of CREB1/ATF1 inhibitors, and (iv) antibody-drug conjugate testing (ADC). The first approach encompassed DNA exome and RNA deep sequencing of the largest human CCS cohort yet reported consisting of 47 patient tumor samples and 8 cell lines. RESULTS: Sequencing revealed recurrent mutations in cell cycle checkpoint, DNA double-strand break repair or DNA mismatch repair genes, with a correspondingly low to intermediate tumor mutational burden. DNA multi-copy gains with corresponding high RNA expression were observed in CCS tumor subsets. CCS cell lines responded to the HER3 ADC patritumab deruxtecan in a dose-dependent manner in vitro, with impaired long term cell viability. CONCLUSION: These studies of the genomic, transcriptomic and chemical biology landscape represent a resource 'atlas' for the field of CCS investigation and drug development. CHK inhibitors are identified as having potential relevance, CREB1 inhibitors non-dependence of CCS on CREB1 activity was established, and the potential utility of HER3 ADC being used in CCS is found.


Subject(s)
Sarcoma, Clear Cell , Child , Adolescent , Young Adult , Humans , Sarcoma, Clear Cell/genetics , Sarcoma, Clear Cell/metabolism , Sarcoma, Clear Cell/pathology , Transcriptome , Genomics , Base Sequence , RNA , Oncogene Proteins, Fusion/genetics
3.
J Transl Med ; 21(1): 54, 2023 01 29.
Article in English | MEDLINE | ID: mdl-36710341

ABSTRACT

BACKGROUND: Clear cell sarcomas (CCSs) are translocated aggressive malignancies, most commonly affecting young adults with a high incidence of metastases and a poor prognosis. Research into the disease is more feasible when adequate models are available. By establishing CCS cell lines from a primary and metastatic lesion and isolating healthy fibroblasts from the same patient, the in vivo process is accurately reflected and aspects of clinical multistep carcinogenesis recapitulated. METHODS: Isolated tumor cells and normal healthy skin fibroblasts from the same patient were compared in terms of growth behavior and morphological characteristics using light and electron microscopy. Tumorigenicity potential was determined by soft agar colony formation assay and in vivo xenograft applications. While genetic differences between the two lineages were examined by copy number alternation profiles, nuclear magnetic resonance spectroscopy determined arginine methylation as epigenetic features. Potential anti-tumor effects of a protein arginine N-methyltransferase type I (PRMT1) inhibitor were elicited in 2D and 3D cell culture experiments using cell viability and apoptosis assays. Statistical significance was calculated by one-way ANOVA and unpaired t-test. RESULTS: The two established CCS cell lines named MUG Lucifer prim and MUG Lucifer met showed differences in morphology, genetic and epigenetic data, reflecting the respective original tissue. The detailed cell line characterization especially in regards to the epigenetic domain allows investigation of new innovative therapies. Based on the epigenetic data, a PRMT1 inhibitor was used to demonstrate the targeted antitumor effect; normal tissue cells isolated and immortalized from the same patient were not affected with the IC50 used. CONCLUSIONS: MUG Lucifer prim, MUG Lucifer met and isolated and immortalized fibroblasts from the same patient represent an ideal in vitro model to explore the biology of CCS. Based on this cell culture model, novel therapies could be tested in the form of PRMT1 inhibitors, which drive tumor cells into apoptosis, but show no effect on fibroblasts, further supporting their potential as promising treatment options in the combat against CCS. The data substantiate the importance of tailored therapies in the advanced metastatic stage of CCS.


Subject(s)
Sarcoma, Clear Cell , Humans , Sarcoma, Clear Cell/genetics , Sarcoma, Clear Cell/metabolism , Sarcoma, Clear Cell/pathology , Cell Line , Enzyme Inhibitors , Arginine/genetics , Arginine/metabolism , Arginine/therapeutic use , Epigenesis, Genetic , Cell Line, Tumor , Protein-Arginine N-Methyltransferases/genetics , Protein-Arginine N-Methyltransferases/metabolism , Protein-Arginine N-Methyltransferases/therapeutic use , Repressor Proteins/genetics
4.
J Pediatr Hematol Oncol ; 43(8): 294-300, 2021 Nov 01.
Article in English | MEDLINE | ID: mdl-34673711

ABSTRACT

BACKGROUND AND AIM: Clear cell sarcoma of kidney (CCSK) is the second most common pediatric renal malignancy, constituting ∼3% of renal tumors. Due to its morphologic diversity, the diagnosis of CCSK is often challenging. Recent studies have identified internal tandem duplication of BCL6 corepressor (BCOR) gene in CCSKs which coupled with cyclin D1 immunoreactivity, is helpful in differentiating it from its mimics, particularly blastema-rich Wilms tumor (WT), malignant rhabdoid tumor (MRT), and congenital mesoblastic nephroma (CMN). We aimed to evaluate the utility of cyclin D1 and BCOR immunohistochemistry in differentiating CCSK from its morphologic mimics. MATERIALS AND METHODS: Our cohort comprised of 38 pediatric renal tumors which included CCSK (n=18), WT (n=10), MRT (n=5), and CMN (n=5) cases. A detailed clinicopathologic analysis was performed, and tissue microarray were constructed for CCSK and WT, while MRT and CMN tumors were individually stained. RESULTS: The age ranged from 2 months to 16 years with male:female ratio of 3:1. Strong, diffuse nuclear immunoreactivity for cyclin D1 and BCOR was noted in 61% (n=11/18) and 83% (n=15/18) of CCSK, respectively, while it was significantly less in WT (n=3/10 for cyclin D1) (n=2/10 for BCOR). None of the MRT and CMN examples demonstrated any immunoreactivity. Interestingly, only the blastemal component of WTs showed distinct, rare nuclear immunoreactivity for cyclin D1 or BCOR and the combination of these was never positive in a given case. CONCLUSION: Our results provide evidence that concurrent immunopositivity with cyclin D1 and BCOR is helpful in distinguishing CCSK from its morphologic mimics.


Subject(s)
Biomarkers, Tumor/metabolism , Cyclin D1/metabolism , Nephroma, Mesoblastic/diagnosis , Proto-Oncogene Proteins/metabolism , Repressor Proteins/metabolism , Rhabdoid Tumor/diagnosis , Sarcoma, Clear Cell/diagnosis , Wilms Tumor/diagnosis , Adolescent , Child , Child, Preschool , Diagnosis, Differential , Female , Follow-Up Studies , Humans , Immunohistochemistry , Infant , Kidney Neoplasms/diagnosis , Kidney Neoplasms/metabolism , Male , Nephroma, Mesoblastic/metabolism , Prognosis , Rhabdoid Tumor/metabolism , Sarcoma, Clear Cell/metabolism , Wilms Tumor/metabolism
5.
Ann Diagn Pathol ; 55: 151813, 2021 Dec.
Article in English | MEDLINE | ID: mdl-34509898

ABSTRACT

Malignant gastrointestinal neuroectodermal tumor (GNET) is a rare malignant primary gastrointestinal mesenchymal tumor which can be diagnosed via fine-needle aspiration (FNA) cytology. In the context of FNA, the diagnosis requires a cell block and the use of significant resources including immunohistochemical stains and molecular testing. The differential diagnosis of GNET includes clear cell sarcoma (CCS), gastrointestinal stromal tumor (GIST), gastric schwannoma, metastatic melanoma, malignant perivascular epithelioid cell tumor (PEComa) and granular cell tumor, among others. Here we describe a case which was initially diagnosed as malignant granular cell tumor by FNA which was later revised to GNET following the finding of an EWSR1-ATF1 fusion gene rearrangement.


Subject(s)
Gastrointestinal Tract/pathology , Neuroectodermal Tumors , Biomarkers, Tumor/analysis , Biomarkers, Tumor/metabolism , Biopsy, Fine-Needle , Calmodulin-Binding Proteins/analysis , Calmodulin-Binding Proteins/metabolism , Diagnosis, Differential , Female , Gastrointestinal Neoplasms/diagnosis , Gastrointestinal Neoplasms/metabolism , Gastrointestinal Neoplasms/pathology , Gastrointestinal Stromal Tumors/diagnosis , Gastrointestinal Stromal Tumors/metabolism , Gastrointestinal Stromal Tumors/pathology , Humans , Immunohistochemistry , In Situ Hybridization, Fluorescence , Melanoma/diagnosis , Melanoma/metabolism , Melanoma/pathology , Middle Aged , Neuroectodermal Tumors/diagnosis , Neuroectodermal Tumors/metabolism , Neuroectodermal Tumors/pathology , Sarcoma, Clear Cell/diagnosis , Sarcoma, Clear Cell/metabolism , Sarcoma, Clear Cell/pathology
6.
Pediatr Dev Pathol ; 23(5): 345-351, 2020.
Article in English | MEDLINE | ID: mdl-32364435

ABSTRACT

INTRODUCTION: The purpose of this study was to establish a reliable panel of antibodies for immunohistochemical corroboration of a diagnosis of clear cell sarcoma of kidney (CCSK), taking into consideration the various genotypic subsets of CCSK. METHODS: We conducted full genotypic analysis for evidence of YWHAE-NUTM2, BCOR internal tandem duplication (ITD), and BCOR-CCNB3 in 68 archival cases of CCSK and then immunostained all cases for CCND1, TLE1, and BCOR along with 63 control samples representing tumor types that may enter into the differential diagnosis of CCSK, including 7 congenital mesoblastic nephromas, 2 desmoplastic small round cell tumors, 13 malignant rhabdoid tumors, 9 Ewing sarcomas/primitive neuroectodermal tumor, 5 synovial sarcomas, and 27 Wilms' tumors. RESULTS: Molecular assays showed that 54 CCSKs harbored a BCOR-ITD, 1 case expressed a YWHAE-NUTM2 fusion transcript while none expressed the BCOR-CCNB3 fusion. The remaining 13 CCSKs were designated "triple-negative" based on the molecular findings. CCND1 showed positive immunoreactivity across all subgroups. TLE1 was positive in 94% of cases, including 1 YWHAE-NUTM2 fusion-positive case. Three BCOR-ITD-positive tumors were TLE1-negative. BCOR immunostaining was most variable among subgroups, with triple-negative tumors showing the weakest staining. In all, 10/68 (15%) tumors did not stain for BCOR, of which 4 were triple-negative (4/13 = 31%) and 6 were BCOR-ITD-positive (6/54 = 11%). The single YWHAE-NUTM2-positive tumor showed strong staining for all 3 markers. No single case was negative for all 3 stains; however, 3 cases showed no reactivity for either BCOR or TLE1 of which 1 was triple-negative and 2 BCOR-ITD-positive. CONCLUSION: Having completed the first comprehensive evaluation of immunostaining of 68 fully genotyped CCSK tumors, we show herein that there is a rationale for the use of a small panel of antibodies to assist in the diagnosis of CCSK regardless of genotype, and we demonstrate that in combination CCND1, TLE1, and BCOR are compelling markers in aiding CCSK diagnosis.


Subject(s)
Biomarkers, Tumor/genetics , Genetic Association Studies , Kidney Neoplasms/diagnosis , Sarcoma, Clear Cell/diagnosis , Biomarkers, Tumor/immunology , Biomarkers, Tumor/metabolism , Gene Fusion , Genotyping Techniques , Humans , Immunohistochemistry , Immunophenotyping , Kidney Neoplasms/genetics , Kidney Neoplasms/immunology , Kidney Neoplasms/metabolism , Sarcoma, Clear Cell/genetics , Sarcoma, Clear Cell/immunology , Sarcoma, Clear Cell/metabolism , Tandem Repeat Sequences
7.
J Cutan Pathol ; 46(11): 810-818, 2019 Nov.
Article in English | MEDLINE | ID: mdl-31237704

ABSTRACT

A cutaneous melanocytic tumor with morphologic overlap with clear cell sarcoma, but defined by CRTC1-TRIM11 gene fusion, was recently described in a series of five adult patients. Here, we expand the clinicopathologic features of this entity by four additional cases which include pediatric presentation, exophytic growth, and propensity to occur on the head. Patients (2F; 2M) had a median age of 41 years (range 11-59). Sites of involvement included leg, ear, and face. Tumors were circumscribed, unencapsulated, mostly limited to the dermis, and varied from 5 to 35 mm. One case was exophytic. Lesional cells were arranged in nests and fascicles, and were monomorphic and fusiform with moderate pale to clear cytoplasm, occasional nuclear pseudo-inclusions, and small to prominent nucleoli. Mitotic rate was variable (rare to 12/10 HPF, median 3/10 HPF). The pediatric case showed increased nuclear pleomorphism, tumor necrosis, and mitotic figures. All cases showed strong, diffuse nuclear staining for SOX10, but were negative or focal for S100 protein, HMB45 and Melan-A expression. Cases were positive by FISH technique and/or RNA sequencing for a TRIM11 rearrangement/fusion, and negative for EWSR1 rearrangement. This series is presented to aid in further characterization of this novel melanocytic tumor.


Subject(s)
Melanocytes , Oncogene Proteins, Fusion , Sarcoma, Clear Cell , Skin Neoplasms , Transcription Factors , Tripartite Motif Proteins , Ubiquitin-Protein Ligases , Adult , Cell Nucleolus/genetics , Cell Nucleolus/metabolism , Cell Nucleolus/pathology , Child , Cytoplasm/genetics , Cytoplasm/metabolism , Cytoplasm/pathology , Female , Humans , MART-1 Antigen/genetics , MART-1 Antigen/metabolism , Male , Melanocytes/metabolism , Melanocytes/pathology , Middle Aged , Oncogene Proteins, Fusion/genetics , Oncogene Proteins, Fusion/metabolism , S100 Proteins/genetics , S100 Proteins/metabolism , SOXE Transcription Factors/genetics , SOXE Transcription Factors/metabolism , Sarcoma, Clear Cell/genetics , Sarcoma, Clear Cell/metabolism , Sarcoma, Clear Cell/pathology , Skin Neoplasms/genetics , Skin Neoplasms/metabolism , Skin Neoplasms/pathology , Transcription Factors/genetics , Transcription Factors/metabolism , Tripartite Motif Proteins/genetics , Tripartite Motif Proteins/metabolism , Ubiquitin-Protein Ligases/genetics , Ubiquitin-Protein Ligases/metabolism
8.
Pathol Int ; 69(8): 496-501, 2019 Aug.
Article in English | MEDLINE | ID: mdl-31276279

ABSTRACT

Pathological diagnosis of dermal melanocytic tumors is often problematic owing to histological resemblance. Recently, cutaneous melanocytoma with CRTC1-TRIM11 (CMCT) was added to this category. However, only six cases have been reported so far. We herein present a case of a 77-year-old Japanese man with CMCT. The patient presented a nodule in the right thigh and underwent surgical resection. Histological examination indicated a well-demarcated 6 × 5 mm-sized tumor nodule in the dermis and subcutis. The tumor was amelanotic, consisting of uniform nests and fascicles of spindled, or epithelioid cells. The melanocytic nature was evident by immunohistochemistry. The CRTC1-TRIM11 fusion was detected by TRIM11 immunostaining, chromogenic in situ hybridization, and RT-PCR/direct sequencing. He has been free from the tumor for 1 year after additional resection. The main differential diagnosis of CMCT includes primary and metastatic dermal malignant melanomas (MM) and dermal/subcutaneous clear cell sarcoma (CCS). Additionally, histological overlap with paraganglioma-like dermal melanocytic tumor was considered. Although some investigators argue that CMCT is a variant of CCS, we think it should be separated from CCS, and subcutaneous/dermal CCS should be confined to tumors with EWSR1-ATF1/ CREB1 fusion. However, longer follow-up and more case studies are needed for revealing the true prognosis of CMCT.


Subject(s)
Biomarkers, Tumor/metabolism , Melanoma/diagnosis , Oncogene Proteins, Fusion/metabolism , Sarcoma, Clear Cell/diagnosis , Skin Neoplasms/diagnosis , Soft Tissue Neoplasms/diagnosis , Transcription Factors/metabolism , Tripartite Motif Proteins/metabolism , Ubiquitin-Protein Ligases/metabolism , Aged , Biomarkers, Tumor/genetics , Diagnosis, Differential , Humans , Male , Melanoma/metabolism , Melanoma/pathology , Oncogene Proteins, Fusion/genetics , Sarcoma, Clear Cell/metabolism , Sarcoma, Clear Cell/pathology , Skin Neoplasms/metabolism , Skin Neoplasms/pathology , Soft Tissue Neoplasms/metabolism , Soft Tissue Neoplasms/pathology , Transcription Factors/genetics , Tripartite Motif Proteins/genetics , Ubiquitin-Protein Ligases/genetics , Melanoma, Cutaneous Malignant
10.
Histopathology ; 67(3): 306-12, 2015 Sep.
Article in English | MEDLINE | ID: mdl-25556515

ABSTRACT

AIMS: Distinguishing clear cell sarcoma of the kidney (CCSK) from other paediatric malignancies, particularly blastema-rich Wilms tumour (WT) and congenital mesoblastic nephroma (CMN), is challenging. Specific immunohistochemistry for CCSK does not exist, and diagnosis rests upon histopa thology. Recently, the YWHAE-FAM22 rearrange ment, identical to that in endometrial stromal sarcoma (ESS), has been identified in CCSKs. As this fusion results in overexpression of cyclin D1 in ESS, we postulated that overexpression would also occur in CCSK; cyclin D1 immunohistochemistry could then be used to differentiate CCSK from other tumours. The goal of this study was therefore to evaluate the utility of cyclin D1 immunohistochemistry in identifying CCSK and helping to differentiate it from its mimics. METHODS AND RESULTS: Cyclin D1 expression was evaluated in 59 renal tumours-CCSK (14), WT (25), rhabdoid tumour (four), Ewing sarcoma (five), and CMN (11)-and four neuroblastomas. All 14 CCSKs showed diffuse and strong reactivity. In contrast, the blastematous component of most WTs showed only rare positive nuclei, that of rhabdoid tumours showed rare to focal immunoreactivity, and that of more than half of CMNs showed weak or focal immunoreactivity. Most Ewing sarcomas and all neuroblastomas showed diffuse moderate to strong staining. CONCLUSIONS: Cyclin D1 is most helpful in distinguishing CCSK from WT, rhabdoid tumour, and some CMNs, but not from neuroblastoma or Ewing sarcomas.


Subject(s)
Cyclin D1/metabolism , Kidney Neoplasms/metabolism , Kidney Neoplasms/pathology , Sarcoma, Clear Cell/metabolism , Sarcoma, Clear Cell/pathology , Biomarkers, Tumor/metabolism , Child, Preschool , Diagnosis, Differential , Female , Humans , Immunohistochemistry , Kidney Neoplasms/diagnosis , Male , Nephroma, Mesoblastic/diagnosis , Nephroma, Mesoblastic/metabolism , Neuroblastoma/diagnosis , Neuroblastoma/metabolism , Rhabdoid Tumor/diagnosis , Rhabdoid Tumor/metabolism , Sarcoma, Clear Cell/diagnosis , Sarcoma, Ewing/diagnosis , Sarcoma, Ewing/metabolism , Wilms Tumor/diagnosis , Wilms Tumor/metabolism
11.
Am J Pathol ; 182(4): 1347-56, 2013 Apr.
Article in English | MEDLINE | ID: mdl-23415961

ABSTRACT

The mesenchymal, clear cell, and dedifferentiated chondrosarcoma subtypes are extremely rare, together constituting 10% to 15% of all chondrosarcomas. Their poor prognosis and lack of efficacious treatment emphasizes the need to elucidate the pathways playing a pivotal role in these tumors. We constructed tissue microarrays containing 42 dedifferentiated, 23 clear cell, and 23 mesenchymal chondrosarcomas and performed immunohistochemistry to study the expression of growth plate-signaling molecules and molecules shown to be involved in conventional chondrosarcoma. We observed high expression of SOX-9 and FGFR-3, as well as aberrant cellular localization of heparan sulfate proteoglycans, in all subtypes. TGFß signaling through p-SMAD2 and PAI-1 was highly active in all chondrosarcoma subtypes, which suggests that TGFß inhibitors as a possible therapeutic strategy in rare chondrosarcoma subtypes. As in conventional chondrosarcoma, antiapoptotic proteins (Bcl-2, and/or Bcl-xl) were highly expressed in all subtypes. Inhibition with the BH-3 mimetic ABT-737 rendered dedifferentiated chondrosarcoma cell lines sensitive to doxorubicin or cisplatin. Our data indicate that antiapoptotic proteins may play an important role in chemoresistance, suggesting a promising role for targeting Bcl-2 family members in chondrosarcoma treatment, irrespective of the subtype.


Subject(s)
Antineoplastic Agents/pharmacology , Cell Dedifferentiation/drug effects , Chondrosarcoma, Mesenchymal/pathology , Molecular Targeted Therapy , Proto-Oncogene Proteins c-bcl-2/antagonists & inhibitors , Sarcoma, Clear Cell/pathology , Transforming Growth Factor beta/antagonists & inhibitors , Adult , Aged , Aged, 80 and over , Antineoplastic Agents/therapeutic use , Chondrosarcoma, Mesenchymal/classification , Chondrosarcoma, Mesenchymal/drug therapy , Chondrosarcoma, Mesenchymal/metabolism , Drug Resistance, Neoplasm/drug effects , Female , Humans , Immunohistochemistry , Male , Middle Aged , Neoplasm Proteins/metabolism , Paraffin Embedding , Proto-Oncogene Proteins c-bcl-2/metabolism , Sarcoma, Clear Cell/classification , Sarcoma, Clear Cell/drug therapy , Sarcoma, Clear Cell/metabolism , Signal Transduction/drug effects , Tissue Fixation , Transforming Growth Factor beta/metabolism , Young Adult
12.
Cancer Cell ; 9(6): 473-84, 2006 Jun.
Article in English | MEDLINE | ID: mdl-16766266

ABSTRACT

Clear cell sarcoma (CCS) harbors a pathognomonic chromosomal translocation fusing the Ewing's sarcoma gene (EWS) to the CREB family transcription factor ATF1 and exhibits melanocytic features. We show that EWS-ATF1 occupies the MITF promoter, mimicking melanocyte-stimulating hormone (MSH) signaling to induce expression of MITF, the melanocytic master transcription factor and an amplified oncogene in melanoma. Knockdown/rescue studies revealed that MITF mediates the requirement of EWS-ATF1 for CCS survival in vitro and in vivo as well as for melanocytic differentiation. Moreover, MITF and TFE3 reciprocally rescue one another in lines derived from CCS or pediatric renal carcinoma. Seemingly unrelated tumors thus employ distinct strategies to oncogenically dysregulate the MiT family, collectively broadening the definition of MiT-associated human cancers.


Subject(s)
Activating Transcription Factor 1/metabolism , DNA-Binding Proteins/metabolism , Microphthalmia-Associated Transcription Factor/metabolism , Nuclear Proteins/metabolism , Oncogene Proteins, Fusion/physiology , RNA-Binding Protein EWS/genetics , Sarcoma, Clear Cell/metabolism , Activating Transcription Factor 1/genetics , Animals , Basic Helix-Loop-Helix Leucine Zipper Transcription Factors/metabolism , Cell Differentiation , Cell Line, Tumor , Cell Proliferation , DNA-Binding Proteins/biosynthesis , DNA-Binding Proteins/genetics , High Mobility Group Proteins/biosynthesis , Humans , Melanocyte-Stimulating Hormones/physiology , Melanocytes/metabolism , Melanocytes/pathology , Melanoma/metabolism , Melanoma/pathology , Mice , Mice, Nude , Microphthalmia-Associated Transcription Factor/genetics , Neoplasm Transplantation , Nuclear Proteins/genetics , Oncogene Proteins, Fusion/genetics , Promoter Regions, Genetic , Regulatory Factor X Transcription Factors , SOXE Transcription Factors , Sarcoma, Clear Cell/pathology , Signal Transduction , Transcription Factors/biosynthesis
13.
Fetal Pediatr Pathol ; 33(4): 244-52, 2014 Aug.
Article in English | MEDLINE | ID: mdl-24897005

ABSTRACT

Paired box (PAX) gene antibodies have made it into the mainstream of tumor diagnosis in the recent years. We report the immunoreactivity expression patterns of three PAX genes (PAX2, PAX5 and PAX8) in poorly differentiated small round cell tumors of childhood for possible useful diagnostic applications. We collected and analyzed 123 cases of poorly differentiated small round cell tumors of childhood for their PAX immunoexpression patterns. The results indicated that PAX2 was strongly positive in all alveolar rhabdomyosarcomas and in two-thirds of the kidney clear cell sarcomas, and displayed variable expression in one-half of the embryonal rhabdomyosarcomas. PAX8 immunoexpression was noticed in five and three cases of alveolar rhabdomyosarcomas and embryonal rhabdomyosarcomas, respectively. About one-third of malignant rhabdoid tumors were PAX2-positive and PAX8-positive. All of the Ewing sarcoma and neuroblastoma cases stained negative with all three PAX stains.


Subject(s)
Neoplasms/metabolism , Neoplasms/pathology , PAX2 Transcription Factor/metabolism , PAX5 Transcription Factor/metabolism , Paired Box Transcription Factors/metabolism , Biomarkers, Tumor/metabolism , Brain Neoplasms/metabolism , Brain Neoplasms/pathology , Cell Differentiation , Child , Humans , Immunohistochemistry , Kidney Neoplasms/metabolism , Kidney Neoplasms/pathology , Neuroblastoma/metabolism , Neuroblastoma/pathology , PAX8 Transcription Factor , Retrospective Studies , Rhabdoid Tumor/metabolism , Rhabdoid Tumor/pathology , Rhabdomyosarcoma, Alveolar/metabolism , Rhabdomyosarcoma, Alveolar/pathology , Rhabdomyosarcoma, Embryonal/metabolism , Rhabdomyosarcoma, Embryonal/pathology , Sarcoma, Clear Cell/metabolism , Sarcoma, Clear Cell/pathology , Sarcoma, Ewing/metabolism , Sarcoma, Ewing/pathology
14.
Head Neck Pathol ; 18(1): 25, 2024 Mar 25.
Article in English | MEDLINE | ID: mdl-38526767

ABSTRACT

OBJECTIVE: To review tumors identified as "clear cell sarcoma" in order to determine similarities to the rare EWS fusion positive jaw and salivary gland tumors clear cell odontogenic carcinoma (CCOC) and clear cell carcinoma of the salivary gland (CCC). METHODS: PubMed was used to collect all reports of clear cell sarcoma (CCS). Search parameters were "clear cell sarcoma" and "CCS." References in the publications were screened and cross-referenced. Data extracted included demographic characteristics, presenting signs and symptoms, radiographic findings, histological and immunohistochemical features and known molecular/genetic aberrations. RESULTS: Clear cell sarcoma has several similarities to CCOC and CCC. All three tumor types have similar histologic appearances including the presence of clear cells, as well as similar genetic profiles in that all harbor an EWSR1-CREB family fusions. Additionally, these tumors appear in soft tissue as well as bone, and can have a prolonged clinical course. CCS can appear anywhere in the body, including the head and neck region. All three tumors appear to have a predilection to women, although CCS may have a slight younger age of onset as compared to CCOC and CCC (3rd vs 5th decade of life, respectively). CONCLUSION: Gaining a better understanding of the similarities and differences between these three tumors may lead to a better understanding of each one.


Subject(s)
Carcinoma , Odontogenic Tumors , Salivary Gland Neoplasms , Sarcoma, Clear Cell , Humans , Female , Sarcoma, Clear Cell/genetics , Sarcoma, Clear Cell/metabolism , Sarcoma, Clear Cell/pathology , RNA-Binding Protein EWS/genetics , Odontogenic Tumors/pathology , Salivary Gland Neoplasms/genetics , Oncogene Proteins, Fusion/genetics
15.
Adv Anat Pathol ; 20(2): 130-5, 2013 Mar.
Article in English | MEDLINE | ID: mdl-23399799

ABSTRACT

The authors report 2 cases of an apparently unpublished stromal tumor of the lung characterized by a predominantly endobronchial growth pattern and benign-appearing clear cells. Both tumors were discovered incidentally in adult patients during routine workups for other medical reasons and treated with lobectomy. On gross inspection there was no evidence of infiltration of the adjacent lung tissue. Microscopically, both lesions featured monotonous oval-shaped to spindle-shaped cells growing in a vaguely nested pattern. The cytoplasm was slightly vacuolated or granular. In 1 case there was a variable admixture with mature fat. Immunohistochemistry was negative for markers of epithelial and stromal differentiation except for vimentin. A focal reaction for CD34 was seen in 1 case. No mutation of coding sequence of VHL gene was seen in one case. Medical follow-up at 1 year was negative for tumor recurrence or metastases. The broad differential diagnosis within the spectrum of stromal lung tumor is discussed. Owing to distinctive microscopic features such as the nesting of clear cells within a vascularized background, both tumors appeared similar to hemangioblastoma, although the expected immunohistochemical profile of the latter was not fully expressed. Because of pattern of growth seen in both lesions we believe that the appellation of endobronchial, hemangioblastoma-like clear cell stromal tumor may be provisionally designed.


Subject(s)
Hemangioblastoma/diagnosis , Lung Neoplasms/diagnosis , Sarcoma, Clear Cell/diagnosis , Stromal Cells/pathology , Adult , Aged , Antigens, CD34/metabolism , Biomarkers, Tumor/metabolism , Disease-Free Survival , Female , Hemangioblastoma/metabolism , Hemangioblastoma/surgery , Humans , Incidental Findings , Lung Neoplasms/metabolism , Lung Neoplasms/surgery , Male , Sarcoma, Clear Cell/metabolism , Sarcoma, Clear Cell/surgery , Stromal Cells/metabolism
16.
Adv Anat Pathol ; 20(2): 75-85, 2013 Mar.
Article in English | MEDLINE | ID: mdl-23399793

ABSTRACT

Rearrangements of the EWSR1 gene are found in an increasing number of human neoplasms, including several tumors that can involve the skin: Ewing sarcoma/primitive neuroectodermal tumor, angiomatoid (malignant) fibrous histiocytoma, myoepithelioma of soft tissue, and clear cell sarcoma. Although these tumors share this common genetic link, they have very different clinical features, morphology, immunophenotype, and sometimes fusion gene partners; these will be the subjects of this review.


Subject(s)
Calmodulin-Binding Proteins/genetics , Gene Fusion , Gene Rearrangement , Oncogene Proteins, Fusion/genetics , RNA-Binding Proteins/genetics , Skin Neoplasms/genetics , Calmodulin-Binding Proteins/metabolism , Gene Expression Regulation, Neoplastic , Histiocytoma, Malignant Fibrous/genetics , Histiocytoma, Malignant Fibrous/metabolism , Histiocytoma, Malignant Fibrous/pathology , Humans , In Situ Hybridization, Fluorescence , Myoepithelioma/genetics , Myoepithelioma/metabolism , Myoepithelioma/pathology , Neuroectodermal Tumors, Primitive/genetics , Neuroectodermal Tumors, Primitive/metabolism , Neuroectodermal Tumors, Primitive/pathology , Oncogene Proteins, Fusion/metabolism , RNA-Binding Protein EWS , RNA-Binding Proteins/metabolism , Sarcoma, Clear Cell/genetics , Sarcoma, Clear Cell/metabolism , Sarcoma, Clear Cell/pathology , Sarcoma, Ewing/genetics , Sarcoma, Ewing/metabolism , Sarcoma, Ewing/pathology , Skin Neoplasms/metabolism , Skin Neoplasms/pathology , Soft Tissue Neoplasms/genetics , Soft Tissue Neoplasms/metabolism , Soft Tissue Neoplasms/pathology
17.
J Cutan Pathol ; 40(2): 265-8, 2013 Feb.
Article in English | MEDLINE | ID: mdl-23228147

ABSTRACT

Clear cell sarcoma (CCS) of tendons and aponeuroses, also known as melanoma of soft parts, represents an aggressive rare malignancy that is characterized by a nested or fascicular pattern of spindled cells and a pathognomonic reciprocal translocation, t(12;22)(q13;q12), that results in the fusion of EWSR1 and ATF1 genes. Numerous recent studies have recognized the importance of a cutaneous CCS variant that can mimic a broad spectrum of entities, including spindle cell melanoma, spindle cell squamous carcinoma, cutaneous leiomyosarcoma and atypical fibroxanthoma. We report a case of a 13-year-old boy with cutaneous CCS who presented with a few months history of an asymptomatic papule on the lower lip that was suggestive of a mucocele. Biopsy of the lesion showed a wedge shaped neoplasm arranged in nests and fascicles of epithelioid- to oval-shaped cells with pale cytoplasm, open chromatin and prominent nucleolus. The superficial component was closely opposed to the basal epithelium resembling the junctional nests of a melanocytic neoplasm. The process extended into and involved the striated muscle of the lip. The cells expressed S-100, CD99 and synaptophysin by immunohistochemistry, and there was focal HMB-45 and microphthalmia transcription factor (MiTF) positivity as well. Fluorescence in situ hybridization confirmed the presence of the t(12;22) (ESWR1-ATF1) translocation.


Subject(s)
Lip Neoplasms/pathology , Melanoma/pathology , Oncogene Proteins, Fusion/genetics , Sarcoma, Clear Cell/pathology , Skin Neoplasms/pathology , Adolescent , Diagnosis, Differential , Humans , Immunohistochemistry , In Situ Hybridization, Fluorescence , Lip Neoplasms/genetics , Lip Neoplasms/metabolism , Male , Melanoma/genetics , Melanoma/metabolism , Sarcoma, Clear Cell/genetics , Sarcoma, Clear Cell/metabolism , Skin Neoplasms/genetics , Skin Neoplasms/metabolism
18.
Semin Diagn Pathol ; 30(1): 95-109, 2013 Feb.
Article in English | MEDLINE | ID: mdl-23327733

ABSTRACT

Molecular techniques are increasingly important in the practice of surgical pathology. In soft tissue tumors, there are a number of tumors with recurring cytogenetic abnormalities. Knowledge of these abnormalities has furthered our understanding of these tumors and has also allowed development of molecular techniques to aid in the diagnosis. This review will focus on mesenchymal tumors with specific cytogenetic abnormalities that may present as a superficial tumor of the dermis or subcutis.


Subject(s)
Mesoderm/pathology , Molecular Diagnostic Techniques/methods , Skin Neoplasms/diagnosis , Soft Tissue Neoplasms/diagnosis , Biomarkers, Tumor/metabolism , Bone Neoplasms/diagnosis , Bone Neoplasms/genetics , Bone Neoplasms/metabolism , Chromosome Aberrations , DNA, Neoplasm/analysis , Dermatofibrosarcoma/diagnosis , Dermatofibrosarcoma/genetics , Dermatofibrosarcoma/metabolism , Fasciitis/diagnosis , Fasciitis/genetics , Fasciitis/metabolism , Fibrosarcoma/diagnosis , Fibrosarcoma/genetics , Fibrosarcoma/metabolism , Hemangioendothelioma, Epithelioid/diagnosis , Hemangioendothelioma, Epithelioid/genetics , Hemangioendothelioma, Epithelioid/metabolism , Hemangiosarcoma/diagnosis , Hemangiosarcoma/etiology , Hemangiosarcoma/genetics , Histiocytoma, Malignant Fibrous/diagnosis , Histiocytoma, Malignant Fibrous/genetics , Histiocytoma, Malignant Fibrous/metabolism , Humans , In Situ Hybridization, Fluorescence , Neoplasms, Radiation-Induced/diagnosis , Neoplasms, Radiation-Induced/etiology , Neoplasms, Radiation-Induced/genetics , Oncogene Proteins, Fusion/genetics , Sarcoma, Clear Cell/diagnosis , Sarcoma, Clear Cell/genetics , Sarcoma, Clear Cell/metabolism , Sarcoma, Ewing/diagnosis , Sarcoma, Ewing/genetics , Sarcoma, Ewing/metabolism , Skin Neoplasms/genetics , Skin Neoplasms/metabolism , Soft Tissue Neoplasms/genetics , Soft Tissue Neoplasms/metabolism , Translocation, Genetic
19.
Genes Chromosomes Cancer ; 51(2): 111-26, 2012 Feb.
Article in English | MEDLINE | ID: mdl-22045652

ABSTRACT

To highlight possible similarities and differences in receptor tyrosine kinase (RTK) and downstream signalling activation profiles between clear-cell sarcomas (CCS) and metastatic melanomas (MM), frozen, and paired-matched fixed samples of six CCS with EWSR1 rearrangement (EWSR1+), five CCS without EWSR1 rearrangement (EWSR1-), and seven MM were investigated by means of biochemical, immunohistochemical, FISH, molecular analyses, and immunofluorescence confocal microscopy. Fixed samples of a further 10 CCS and 14 MM were investigated by means of sequencing for BRAF, NRAS, and KRAS mutations and FISH analyses for the gain of chromosomes 22 and 8. RTK analysis of all CCS/MM samples showed activation of short-form (sf) recepteur d'origine nantais (RON) RTK and of PDGFRB, MET, and HER3. Analysis of downstream signaling revealed consistent phosphorylation patterns of PI3K/AKT, RSK, and the mTOR targets S6 and 4EBP1. Analysis of frozen and fixed material from 21 CCS and 21 MM showed the presence of the V600E BRAF mutation in 2/12 EWSR1+ and 3/9 EWSR1- CCS and 9/21 MM and demonstrated a significant (P < 0.001) correlation between the gain of chromosomes 22 and 8 and EWSR1- CCS. Our results show that BRAF mutation can also be present in CCS and support the proposed aberration of chromosomes 22 and 8 as a possibly useful nonrandom hallmark of EWSR1- CCS. Besides, they broaden the spectrum of the similarities of RTK pathway activation between CCS and MM, thus suggesting that new drugs found to be active in melanoma and RON inhibitors could have a role in CCS treatment. © 2011 Wiley Periodicals, Inc.


Subject(s)
Biomarkers, Tumor/metabolism , Melanoma/secondary , Receptor Protein-Tyrosine Kinases/metabolism , Sarcoma, Clear Cell/metabolism , Adult , Aged , Aged, 80 and over , Base Sequence , Biomarkers, Tumor/genetics , Calmodulin-Binding Proteins/genetics , Calmodulin-Binding Proteins/metabolism , Chromosome Duplication , Chromosomes, Human, Pair 22 , Chromosomes, Human, Pair 8 , Female , Gene Expression , Humans , Lymphatic Metastasis , Male , Melanoma/genetics , Melanoma/metabolism , Middle Aged , Phosphorylation , RNA-Binding Protein EWS , RNA-Binding Proteins/genetics , RNA-Binding Proteins/metabolism , Receptor Protein-Tyrosine Kinases/genetics , Sarcoma, Clear Cell/genetics , Sarcoma, Clear Cell/pathology , Sequence Analysis, DNA , Trisomy , Young Adult
20.
BMC Cancer ; 12: 538, 2012 Nov 21.
Article in English | MEDLINE | ID: mdl-23170958

ABSTRACT

BACKGROUND: Clear cell sarcoma (CCS) and malignant melanoma share overlapping immunohistochemistry with regard to the melanocytic markers HMB45, S100, and Melan-A. However, the translocation t(12; 22)(q13; q12) is specific to CCS. Therefore, although these neoplasms are closely related, they are now considered to be distinct entities. However, the translocation is apparently detectable only in 50%-70% of CCS cases. Therefore, the absence of a detectable EWS/AFT1 rearrangement may occasionally lead to erroneous exclusion of a translocation-negative CCS. Therefore, histological assessment is essential for the correct diagnosis of CCS. Primary CCS of the bone is exceedingly rare. Only a few cases of primary CCS arising in the ulna, metatarsals, ribs, radius, sacrum, and humerus have been reported, and primary CCS arising in the pubic bone has not been reported till date. CASE PRESENTATION: We present the case of an 81-year-old man with primary CCS of the pubic bone. Histological examination of the pubic bone revealed monomorphic small-sized cells arranged predominantly as a diffuse sheet with round, hyperchromatic nuclei and inconspicuous nucleoli. The cells had scant cytoplasm, and the biopsy findings indicated small round cell tumor (SRCT). Immunohistochemical staining revealed the tumor cells to be positive for HMB45, S100, and Melan-A but negative for cytokeratin (AE1/AE3) and epithelial membrane antigen. To the best of our knowledge, this is the first case report of primary CCS of the pubic bone resembling SRCT. This ambiguous appearance underscores the difficulties encountered during the histological diagnosis of this rare variant of CCS. CONCLUSION: Awareness of primary CCS of the bone is clinically important for accurate diagnosis and management when the tumor is located in unusual locations such as the pubic bone and when the translocation t(12; 22)(q13; q12) is absent.


Subject(s)
Desmoplastic Small Round Cell Tumor/diagnosis , Pubic Bone/pathology , Sarcoma, Clear Cell/diagnosis , Sarcoma, Small Cell/diagnosis , Aged, 80 and over , Desmoplastic Small Round Cell Tumor/metabolism , Diagnosis, Differential , Humans , Immunohistochemistry , MART-1 Antigen/metabolism , Male , Melanoma/diagnosis , Melanoma/metabolism , Melanoma-Specific Antigens/metabolism , Pubic Bone/metabolism , S100 Proteins/metabolism , Sarcoma, Clear Cell/metabolism , Sarcoma, Small Cell/metabolism , gp100 Melanoma Antigen
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