RESUMEN
Five strains representing a novel yeast species belonging to the genus Wickerhamomyces were independently isolated from Ecuador, Taiwan and the USA. One strain (CLQCA 10-161(T)) was isolated from the white flower of an unidentified plant species collected in the Maquipucuna cloud forest reserve, near Quito, in Ecuador. A second strain (GY7L12) was isolated from the leaf of a Chinese sumac or nutgall tree (Rhus chinensis 'roxburghiana') collected in the Taoyuan mountain area, Kachsiung, in Taiwan. Three additional strains (A543, A546 and A563) were isolated from two species of wood-boring beetle (Xyleborus glabratus and Xyleborinus saxeseni) collected near Clyo, Georgia, USA. Analysis of the D1/D2 domains of the LSU rRNA gene indicated that the novel species belongs to the genus Wickerhamomyces, and is most closely related to Wickerhamomyces sydowiorum, an insect-associated species predominantly found in South Africa. The North American and Taiwanese strains have identical internal transcribed spacer (ITS) sequences and can be distinguished from the Ecuadorian strain based on a single nucleotide substitution in the ITS1 region. The species name of Wickerhamomyces arborarius f.a., sp. nov. is proposed to accommodate these strains, with CLQCA 10-161(T) (â=âCBS 12941(T)â=âNCYC 3743(T)) designated the type strain.
Asunto(s)
Filogenia , Saccharomycetales/clasificación , Árboles/microbiología , Animales , Escarabajos/microbiología , ADN de Hongos/genética , ADN Espaciador Ribosómico/genética , Ecosistema , Ecuador , Flores/microbiología , Datos de Secuencia Molecular , Técnicas de Tipificación Micológica , Hojas de la Planta/microbiología , Saccharomycetales/genética , Saccharomycetales/aislamiento & purificación , Análisis de Secuencia de ADN , Taiwán , Estados UnidosRESUMEN
Twenty-four yeast strains were isolated from ephemeral flowers of Ipomoea spp. and Datura sp. and their associated insects in the Galápagos Archipelago, Ecuador, and from Ipomoea spp. and associated insects in the Cameron Highlands, Malaysia. Sequences of the D1/D2 domains of the large subunit rRNA gene indicated that these strains belong to a novel yeast species of the Kodamaea clade, although the formation of ascospores was not observed. The closest relative is Candida restingae. The human-mediated dispersion of this species by transpacific contacts in ancient times is suggested. The name Kodamaea transpacifica f.a., sp. nov. is proposed to accommodate these isolates. The type strain is CLQCA-24i-070(T) (â=âCBS 12823(T)â=âNCYC 3852(T)); MycoBank number MB 803609.
Asunto(s)
Flores/microbiología , Insectos/microbiología , Ipomoea/microbiología , Filogenia , Saccharomycetales/clasificación , Animales , ADN de Hongos/genética , ADN Espaciador Ribosómico/genética , Ecuador , Humanos , Malasia , Datos de Secuencia Molecular , Técnicas de Tipificación Micológica , ARN Ribosómico/genética , Subunidades Ribosómicas Grandes de Eucariotas/genética , Saccharomycetales/genética , Saccharomycetales/aislamiento & purificación , Análisis de Secuencia de ADNRESUMEN
In the course of an on-going study aimed at cataloguing the natural yeast biodiversity found in Ecuador, two strains (CLQCA 13-025 and CLQCA 20-004(T)) were isolated from samples of cow manure and rotten wood collected in two separate provinces of the country (Orellana and Bolívar). These strains were found to represent a novel yeast species based on the sequences of their D1/D2 domain of the large-subunit (LSU) rRNA gene and their physiological characteristics. Phylogenetic analysis based on LSU D1/D2 sequences revealed this novel species to belong to the Metschnikowia clade and to be most closely related to Candida suratensis, a species recently discovered in a mangrove forest in Thailand. The species name of Candida ecuadorensis sp. nov. is proposed to accommodate these strains, with strain CLQCA 20-004(T) (=CBS 12653(T) = NCYC 3782(T)) designated as the type strain.
Asunto(s)
Candida/clasificación , Estiércol/microbiología , Filogenia , Madera/microbiología , Animales , Biodiversidad , Candida/genética , Candida/aislamiento & purificación , Bovinos , ADN de Hongos/genética , ADN Espaciador Ribosómico/genética , Ecuador , Datos de Secuencia Molecular , Técnicas de Tipificación Micológica , Análisis de Secuencia de ADNRESUMEN
A single strain, CLQCA-10-114(T), representing a novel yeast species belonging to the genus Saturnispora was isolated from the fruit of an unidentified species of bramble (Rubus sp.), collected from the Maquipucuna cloud forest reserve, near Quito, in Ecuador. Sequence analyses of the D1/D2 domains of the large-subunit rRNA gene and ribosomal internal transcribed spacer region indicated that the novel species is most closely related to the recently described species Saturnispora gosingensis, isolated from the fruiting body of a mushroom collected in Taiwan, and Saturnispora hagleri, a Drosophila-associated yeast found in Brazil. The name Saturnispora quitensis sp. nov. is proposed to accommodate this strain; the type strain is CLQCA-10-114(T) (=CBS 12184(T)=NCYC 3744(T)).
Asunto(s)
Rosaceae/microbiología , Saccharomycetales/clasificación , Saccharomycetales/aislamiento & purificación , Conservación de los Recursos Naturales , ADN de Hongos/genética , ADN Espaciador Ribosómico/genética , Ecuador , Frutas/microbiología , Datos de Secuencia Molecular , Filogenia , Saccharomycetales/genéticaRESUMEN
Four strains representing a novel yeast species belonging to the genus Candida were independently isolated in Taiwan and Ecuador. Two strains (G17(T) and G31) were isolated in Taiwan, by pellet precipitation from plastic-bottled tea drinks produced in Indonesia, while two additional strains (CLQCA 10-049 and CLQCA 10-062) were recovered from ancient chicha fermentation vessels found in tombs in Quito, Ecuador. These four strains were morphologically, and phylogenetically identical to each other. No sexual reproduction was observed on common sporulation media. Large-subunit (LSU) rRNA gene sequence analysis revealed the four strains to belong to the Lodderomyces clade, closely related to members of the Candida parapsilosis species complex. The four strains, which have identical LSU D1/D2 sequences, differ from their closest phylogenetic neighbors, Candida orthopsilosis and Candida parapsilosis, by 6-9 nt substitutions, respectively. Physiologically, the four strains are similar to Candida parapsilosis, although they can be distinguished from their closest relative by the assimilation of arbutin, nitrite, and creatine. The Indonesian and Ecuadorian strain sets can also be distinguished from one another based on ITS sequencing, differing by 4 substitutions in ITS1 and 1 single nucleotide indel in ITS2. Collectively, the results indicate that the four strains represent a previously unrecognized species of Candida. The name Candida theae sp. nov. is proposed to accommodate these strains, with G-17(T) (BCRC 23242(T)=CBS 12239(T)=ATCC MYA-4746(T)) designated as the type strain.