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1.
Entropy (Basel) ; 26(3)2024 Mar 03.
Artículo en Inglés | MEDLINE | ID: mdl-38539741

RESUMEN

Phase transitions happen at critical values of the controlling parameters, such as the critical temperature in classical phase transitions, and system critical parameters in the quantum case. However, true criticality happens only at the thermodynamic limit, when the number of particles goes to infinity with constant density. To perform the calculations for the critical parameters, a finite-size scaling approach was developed to extrapolate information from a finite system to the thermodynamic limit. With the advancement in the experimental and theoretical work in the field of ultra-cold systems, particularly trapping and controlling single atomic and molecular systems, one can ask: do finite systems exhibit quantum phase transition? To address this question, finite-size scaling for finite systems was developed to calculate the quantum critical parameters. The recent observation of a quantum phase transition in a single trapped 171 Yb+ ion indicates the possibility of quantum phase transitions in finite systems. This perspective focuses on examining chemical processes at ultra-cold temperatures, as quantum phase transitions-particularly the formation and dissociation of chemical bonds-are the basic processes for understanding the whole of chemistry.

2.
J Chem Inf Model ; 63(21): 6476-6486, 2023 11 13.
Artículo en Inglés | MEDLINE | ID: mdl-37603536

RESUMEN

In the drug discovery paradigm, the evaluation of absorption, distribution, metabolism, and excretion (ADME) and toxicity properties of new chemical entities is one of the most critical issues, which is a time-consuming process, immensely expensive, and poses formidable challenges in pharmaceutical R&D. In recent years, emerging technologies like artificial intelligence (AI), big data, and cloud technologies have garnered great attention to predict the ADME and toxicity of molecules. Currently, the blend of quantum computation and machine learning has attracted considerable attention in almost every field ranging from chemistry to biomedicine and several engineering disciplines as well. Quantum computers have the potential to bring advances in high-throughput experimental techniques and in screening billions of molecules by reducing development costs and time associated with the drug discovery process. Motivated by the efficiency of quantum kernel methods, we proposed a quantum machine learning (QML) framework consisting of a classical support vector classifier algorithm with a kernel-based quantum classifier. To demonstrate the feasibility of the proposed QML framework, the simplified molecular input line entry system (SMILES) notation-based string kernel, combined with a quantum support vector classifier, is used for the evaluation of chemical/drug ADME-Tox properties. The proposed quantum machine learning framework is validated and assessed via large-scale simulations. Based on our results from numerical simulations, the quantum model achieved the best performance as compared to classical counterparts in terms of the area under the curve of the receiver operating characteristic curve (AUC ROC; 0.80-0.95) for predicting outcomes on ADME-Tox data sets for small molecules, with a different number of features. The deployment of the proposed framework in the pharmaceutical industry would be extremely valuable in making the best decisions possible.


Asunto(s)
Inteligencia Artificial , Descubrimiento de Drogas , Descubrimiento de Drogas/métodos , Aprendizaje Automático , Algoritmos , Preparaciones Farmacéuticas
3.
J Phys Chem A ; 127(41): 8751-8764, 2023 Oct 19.
Artículo en Inglés | MEDLINE | ID: mdl-37795926

RESUMEN

Spin liquids─an emergent, exotic collective phase of matter─have garnered enormous attention in recent years. While experimentally many prospective candidates have been proposed and realized, theoretically modeling real materials that display such behavior may pose serious challenges due to the inherently high correlation content of such phases. Over the last few decades, the second-quantum revolution has been the harbinger of a novel computational paradigm capable of initiating a foundational evolution in computational physics. In this report, we strive to use the power of the latter to study a prototypical model, a spin-1/2-unit cell of a Kagome antiferromagnet. Extended lattices of such unit cells are known to possess a magnetically disordered spin-liquid ground state. We employ robust classical numerical techniques such as the density-matrix renormalization group (DMRG) to identify the nature of the ground state through a matrix-product state (MPS) formulation. We subsequently use the gained insight to construct an auxiliary Hamiltonian with reduced measurables and also design an ansatz that is modular and gate-efficient. With robust error-mitigation strategies, we are able to demonstrate that the said ansatz is capable of accurately representing the target ground state even on a real IBMQ backend within 1% accuracy in energy. Since the protocol is linearly scaling O(n) in the number of unit cells, gate requirements, and the number of measurements, it is straightforwardly extendable to larger Kagome lattices that can pave the way for efficient construction of spin-liquid ground states on a quantum device.

4.
J Phys Chem A ; 127(14): 3246-3255, 2023 Apr 13.
Artículo en Inglés | MEDLINE | ID: mdl-36988574

RESUMEN

The Hamiltonian of a quantum system governs the dynamics of the system via the Schrodinger equation. In this paper, the Hamiltonian is reconstructed in the Pauli basis using measurables on random states forming a time series data set. The time propagation is implemented through Trotterization and optimized variationally with gradients computed on the quantum circuit. We validate our output by reproducing the dynamics of unseen observables on a randomly chosen state not used for the optimization. Unlike existing techniques that try and exploit the structure/properties of the Hamiltonian, our scheme is general and provides freedom with regard to what observables or initial states can be used while still remaining efficient with regard to implementation. We extend our protocol to doing quantum state learning where we solve the reverse problem of doing state learning given time series data of observables generated against several Hamiltonian dynamics. We show results on Hamiltonians involving XX, ZZ couplings along with transverse field Ising Hamiltonians and propose an analytical method for the learning of Hamiltonians consisting of generators of the SU(3) group. This paper is likely to pave the way toward using Hamiltonian learning for time series prediction within the context of quantum machine learning algorithms.

5.
Chem Soc Rev ; 51(15): 6475-6573, 2022 Aug 01.
Artículo en Inglés | MEDLINE | ID: mdl-35849066

RESUMEN

Machine learning (ML) has emerged as a formidable force for identifying hidden but pertinent patterns within a given data set with the objective of subsequent generation of automated predictive behavior. In recent years, it is safe to conclude that ML and its close cousin, deep learning (DL), have ushered in unprecedented developments in all areas of physical sciences, especially chemistry. Not only classical variants of ML, even those trainable on near-term quantum hardwares have been developed with promising outcomes. Such algorithms have revolutionized materials design and performance of photovoltaics, electronic structure calculations of ground and excited states of correlated matter, computation of force-fields and potential energy surfaces informing chemical reaction dynamics, reactivity inspired rational strategies of drug designing and even classification of phases of matter with accurate identification of emergent criticality. In this review we shall explicate a subset of such topics and delineate the contributions made by both classical and quantum computing enhanced machine learning algorithms over the past few years. We shall not only present a brief overview of the well-known techniques but also highlight their learning strategies using statistical physical insight. The objective of the review is not only to foster exposition of the aforesaid techniques but also to empower and promote cross-pollination among future research in all areas of chemistry which can benefit from ML and in turn can potentially accelerate the growth of such algorithms.


Asunto(s)
Metodologías Computacionales , Teoría Cuántica , Algoritmos , Aprendizaje Automático
6.
Phys Chem Chem Phys ; 24(41): 25270-25278, 2022 Oct 27.
Artículo en Inglés | MEDLINE | ID: mdl-36222416

RESUMEN

We show that ultra-cold polar diatomic or linear molecules, oriented in an external electric field and mutually coupled by dipole-dipole interactions, can be used to realize the exact Heisenberg XYZ, XXZ and XY models without invoking any approximation. The two lowest lying excited pendular states coupled by microwave or radio-frequency fields are used to encode the pseudo-spin. We map out the general features of the models by evaluating the models constants as functions of the molecular dipole moment, rotational constant, strength and direction of the external field as well as the distance between molecules. We calculate the phase diagram for a linear chain of polar molecules based on the Heisenberg models and discuss their drawbacks, advantages, and potential applications.

7.
Phys Chem Chem Phys ; 24(16): 9298-9307, 2022 Apr 20.
Artículo en Inglés | MEDLINE | ID: mdl-35383350

RESUMEN

In electronic structure calculations, the correlation energy is defined as the difference between the mean field and the exact solution of the non relativistic Schrödinger equation. Such an error in the different calculations is not directly observable as there is no simple quantum mechanical operator, apart from correlation functions, that correspond to such quantity. Here, we use the dimensional scaling approach, in which the electrons are localized at the large-dimensional scaled space, to describe a geometric picture of the electronic correlation. Both, the mean field, and the exact solutions at the large-D limit have distinct geometries. Thus, the difference might be used to describe the correlation effect. Moreover, correlations can be also described and quantified by the entanglement between the electrons, which is a strong correlation without a classical analog. Entanglement is directly observable and it is one of the most striking properties of quantum mechanics and bounded by the area law for local gapped Hamiltonians of interacting many-body systems. This study opens up the possibility of presenting a geometrical picture of the electron-electron correlations and might give a bound on the correlation energy. The results at the large-D limit and at D = 3 indicate the feasibility of using the geometrical picture to get a bound on the electron-electron correlations.

8.
Phys Chem Chem Phys ; 24(47): 28870-28877, 2022 Dec 07.
Artículo en Inglés | MEDLINE | ID: mdl-36426661

RESUMEN

Quantum state tomography is an integral part of quantum computation and offers the starting point for the validation of various quantum devices. One of the central tasks in the field of state tomography is to reconstruct, with high fidelity, the quantum states of a quantum system. From an experiment on a real quantum device, one can obtain the mean measurement values of different operators. With such data as input, in this report we employ the maximal entropy formalism to construct the least biased mixed quantum state that is consistent with the given set of expectation values. Even though, in principle, the reported formalism is quite general and should work for an arbitrary set of observables, in practice we shall demonstrate the efficacy of the algorithm on an informationally complete (IC) set of Hermitian operators. Such a set possesses the advantage of uniquely specifying a single quantum state from which the experimental measurements have been sampled and hence renders the rare opportunity not only to construct a least-biased quantum state but even replicate the exact state prepared experimentally within a preset tolerance. The primary workhorse of the algorithm is reconstructing an energy function which we designate as the effective Hamiltonian of the system, and parameterizing it with Lagrange multipliers, according to the formalism of maximal entropy. These parameters are thereafter optimized variationally so that the reconstructed quantum state of the system converges to the true quantum state within an error threshold. To this end, we employ a parameterized quantum circuit and a hybrid quantum-classical variational algorithm to obtain such a target state, making our recipe easily implementable on a near-term quantum device.

9.
J Chem Phys ; 157(22): 224111, 2022 Dec 14.
Artículo en Inglés | MEDLINE | ID: mdl-36546788

RESUMEN

In this work, we study the magnetic phases of a spatially modulated chain of spin-1 Rydberg excitons. Using the Density Matrix Renormalization Group (DMRG) technique, we study various magnetic and topologically nontrivial phases using both single-particle properties, such as local magnetization and quantum entropy, and many-body ones, such as pair-wise Néel and long-range string correlations. In particular, we investigate the emergence and robustness of the Haldane phase, a topological phase of anti-ferromagnetic spin-1 chains. Furthermore, we devise a hybrid quantum algorithm employing restricted Boltzmann machine to simulate the ground state of such a system that shows very good agreement with the results of exact diagonalization and DMRG.

10.
Proc Natl Acad Sci U S A ; 116(37): 18263-18268, 2019 09 10.
Artículo en Inglés | MEDLINE | ID: mdl-30093387

RESUMEN

Recent work suggests that the long-lived coherences observed in both natural and artificial light-harvesting systems (such as the Fenna-Matthews-Olson complex) could be attributed to the mixing of the pigments' electronic and vibrational degrees of freedom. To investigate the underlying mechanism of these long coherence lifetimes, a sophisticated description of interactions between the molecular aggregates and the nonequilibrium fluctuations in the surrounding environment is necessary. This is done by implementing the hierarchical equations of motion approach on model homodimers, a method used in the intermediate coupling regime for many molecular aggregates wherein the nonequilibrium environment phonons play nontrivial roles in exciton dynamics. Here we report a character change in the vibronic states-reflective of property mixing between the electronic and vibrational states-induced by an interplay between system coupling parameters within the exciton-vibrational near-resonance regime. This mixing dictates vital aspects of coherence lifetime; by tracking the degree of mixing, we are able to elucidate the relationship between coherence lifetime and both the electronic energy fluctuation and the vibrational relaxation dephasing pathways.

11.
J Am Chem Soc ; 143(44): 18426-18445, 2021 Nov 10.
Artículo en Inglés | MEDLINE | ID: mdl-34705449

RESUMEN

Quantum machine-learning algorithms have emerged to be a promising alternative to their classical counterparts as they leverage the power of quantum computers. Such algorithms have been developed to solve problems like electronic structure calculations of molecular systems and spin models in magnetic systems. However, the discussion in all these recipes focuses specifically on targeting the ground state. Herein we demonstrate a quantum algorithm that can filter any energy eigenstate of the system based on either symmetry properties or a predefined choice of the user. The workhorse of our technique is a shallow neural network encoding the desired state of the system with the amplitude computed by sampling the Gibbs-Boltzmann distribution using a quantum circuit and the phase information obtained classically from the nonlinear activation of a separate set of neurons. We show that the resource requirements of our algorithm are strictly quadratic. To demonstrate its efficacy, we use state filtration in monolayer transition metal dichalcogenides which are hitherto unexplored in any flavor of quantum simulations. We implement our algorithm not only on quantum simulators but also on actual IBM-Q quantum devices and show good agreement with the results procured from conventional electronic structure calculations. We thus expect our protocol to provide a new alternative in exploring the band structures of exquisite materials to usual electronic structure methods or machine-learning techniques that are implementable solely on a classical computer.

12.
J Chem Inf Model ; 2021 Jun 16.
Artículo en Inglés | MEDLINE | ID: mdl-34133166

RESUMEN

Quantum machine learning algorithms, the extensions of machine learning to quantum regimes, are believed to be more powerful as they leverage the power of quantum properties. Quantum machine learning methods have been employed to solve quantum many-body systems and have demonstrated accurate electronic structure calculations of lattice models, molecular systems, and recently periodic systems. A hybrid approach using restricted Boltzmann machines and a quantum algorithm to obtain the probability distribution that can be optimized classically is a promising method due to its efficiency and ease of implementation. Here, we implement the benchmark test of the hybrid quantum machine learning on the IBM-Q quantum computer to calculate the electronic structure of typical two-dimensional crystal structures: hexagonal-boron nitride and graphene. The band structures of these systems calculated using the hybrid quantum machine learning approach are in good agreement with those obtained by the conventional electronic structure calculations. This benchmark result implies that the hybrid quantum machine learning method, empowered by quantum computers, could provide a new way of calculating the electronic structures of quantum many-body systems.

13.
Phys Chem Chem Phys ; 23(13): 7841-7848, 2021 Apr 07.
Artículo en Inglés | MEDLINE | ID: mdl-33201955

RESUMEN

We employ a simple and mostly accurate dimensional interpolation formula using dimensional limits D = 1 and D = ∞ to obtain D = 3 ground-state energy of metallic hydrogen. We also present results describing the phase transitions for different symmetries of three-dimensional structure lattices. The interpolation formula not only predicts fairly accurate energies but also predicts a correct functional form of the energy as a function of the lattice parameters. That allows us to calculate different physical quantities such as the bulk modulus, Debye temperature, and critical transition temperature, from the gradient and the curvature of the energy curve as a function of the lattice parameters. These theoretical calculations suggest that metallic hydrogen is a likely candidate for high temperature superconductivity. The dimensional interpolation formula is robust and might be useful to obtain the energies of complex many-body systems.

14.
J Phys Chem A ; 125(34): 7588-7595, 2021 Sep 02.
Artículo en Inglés | MEDLINE | ID: mdl-34410718

RESUMEN

Impressive progress has been made in the past decade in the study of technological applications of varied types of quantum systems. With industry giants like IBM laying down their roadmap for scalable quantum devices with more than 1000-qubits by the end of 2023, efficient validation techniques are also being developed for testing quantum processing on these devices. The characterization of a quantum state is done by experimental measurements through the process called quantum state tomography (QST) which scales exponentially with the size of the system. However, QST performed using incomplete measurements is aptly suited for characterizing these quantum technologies especially with the current nature of noisy intermediate-scale quantum (NISQ) devices where not all mean measurements are available with high fidelity. We, hereby, propose an alternative approach to QST for the complete reconstruction of the density matrix of a quantum system in a pure state for any number of qubits by applying the maximal entropy formalism on the pairwise combinations of the known mean measurements. This approach provides the best estimate of the target state when we know the complete set of observables, which is the case of convergence of the reconstructed density matrix to a pure state. Our goal is to provide a practical inference of a quantum system in a pure state that can find its applications in the field of quantum error mitigation on a real quantum computer that we intend to investigate further.

15.
J Phys Chem A ; 125(34): 7581-7587, 2021 Sep 02.
Artículo en Inglés | MEDLINE | ID: mdl-34427435

RESUMEN

We employ a simple and accurate dimensional interpolation formula for the shapes of random walks at D = 3 and D = 2 based on the analytically known solutions at both limits D = ∞ and D = 1. The results obtained for the radius of gyration of an arbitrary shaped object have about 2% error compared with accurate numerical results at D = 3 and D = 2. We also calculated the asphericity for a three-dimensional random walk using the dimensional interpolation formula. The results agree very well with the numerically simulated results. The method is general and can be used to estimate other properties of random walks.

16.
J Chem Phys ; 154(19): 194107, 2021 May 21.
Artículo en Inglés | MEDLINE | ID: mdl-34240908

RESUMEN

The complex-scaling method can be used to calculate molecular resonances within the Born-Oppenheimer approximation, assuming that the electronic coordinates are dilated independently of the nuclear coordinates. With this method, one will calculate the complex energy of a non-Hermitian Hamiltonian, whose real part is associated with the resonance position and imaginary part is the inverse of the lifetime. In this study, we propose techniques to simulate resonances on a quantum computer. First, we transformed the scaled molecular Hamiltonian to second quantization and then used the Jordan-Wigner transformation to transform the scaled Hamiltonian to the qubit space. To obtain the complex eigenvalues, we introduce the direct measurement method, which is applied to obtain the resonances of a simple one-dimensional model potential that exhibits pre-dissociating resonances analogous to those found in diatomic molecules. Finally, we applied the method to simulate the resonances of the H2 - molecule. The numerical results from the IBM Qiskit simulators and IBM quantum computers verify our techniques.

17.
Proc Natl Acad Sci U S A ; 115(39): E9058-E9066, 2018 09 25.
Artículo en Inglés | MEDLINE | ID: mdl-30194233

RESUMEN

Intense pulsed-laser fields have provided means to both induce spatial alignment of molecules and enhance strength of chemical bonds. The duration of the laser field typically ranges from hundreds of picoseconds to a few femtoseconds. Accordingly, the induced "laser-dressed" properties can be adiabatic, existing only during the pulse, or nonadiabatic, persisting into the subsequent field-free domain. We exemplify these aspects by treating the helium dimer, in its ground [Formula: see text] and first excited [Formula: see text] electronic states. The ground-state dimer when field-free is barely bound, so very responsive to electric fields. We examine two laser realms, designated (I) "intrusive" and (II) "impelling." I employs intense nonresonant laser fields, not strong enough to dislodge electrons, yet interact with the dimer polarizability to induce binding and pendular states in which the dimer axis librates about the electric field direction. II employs superintense high-frequency fields that impel the electrons to undergo quiver oscillations, which interact with the intrinsic Coulomb forces to form an effective binding potential. The dimer bond then becomes much stronger. For I, we map laser-induced pendular alignment within the X state, which is absent for the field-free dimer. For II, we evaluate vibronic transitions from the X to A states, governed by the amplitude of the quiver oscillations.

18.
Phys Chem Chem Phys ; 22(44): 25669-25674, 2020 Nov 18.
Artículo en Inglés | MEDLINE | ID: mdl-33164001

RESUMEN

Entanglement is at the core of quantum information processing and may prove essential for quantum speed-up. Inspired by both theoretical and experimental studies of spin-momentum coupling in systems of ultra-cold atoms, we investigate the entanglement between the spin and momentum degrees of freedom of an optically trapped BEC of 87Rb atoms. We consider entanglement that arises due to the coupling of these degrees of freedom induced by Raman and radio-frequency fields and examine its dependence on the coupling parameters by evaluating von Neumann entropy as well as concurrence as measures of the entanglement attained. Our calculations reveal that under proper experimental conditions significant spin-momentum entanglement can be obtained, with von Neumann entropy of 80% of the maximum attainable value. Our analysis sheds some light on the prospects of using BECs for quantum information applications.

19.
Proc Natl Acad Sci U S A ; 114(22): 5595-5600, 2017 05 30.
Artículo en Inglés | MEDLINE | ID: mdl-28500275

RESUMEN

Recently, an alternative theory concerning the method by which olfactory proteins are activated has garnered attention. This theory proposes that the activation of olfactory G protein-coupled receptors occurs by an inelastic electron tunneling mechanism that is mediated through the presence of an agonist with an appropriate vibrational state to accept the inelastic portion of the tunneling electron's energy. In a recent series of papers, some suggestive theoretical evidence has been offered that this theory may be applied to nonolfactory G protein-coupled receptors (GPCRs), including those associated with the central nervous system (CNS). [Chee HK, June OS (2013) Genomics Inform 11(4):282-288; Chee HK, et al. (2015) FEBS Lett 589(4):548-552; Oh SJ (2012) Genomics Inform 10(2):128-132]. Herein, we test the viability of this idea, both by receptor affinity and receptor activation measured by calcium flux. This test was performed using a pair of well-characterized agonists for members of the 5-HT2 class of serotonin receptors, 2,5-dimethoxy-4-iodoamphetamine (DOI) and N,N-dimethyllysergamide (DAM-57), and their respective deuterated isotopologues. No evidence was found that selective deuteration affected either the binding affinity or the activation by the selected ligands for the examined members of the 5-HT2 receptor class.


Asunto(s)
Anfetaminas/farmacología , Compuestos Heterocíclicos de 4 o más Anillos/farmacología , Receptor de Serotonina 5-HT2A/metabolismo , Agonistas del Receptor de Serotonina 5-HT2/farmacología , Olfato/fisiología , Vibración , Activación Enzimática/fisiología , Humanos , Transducción de Señal
20.
Entropy (Basel) ; 22(8)2020 Jul 29.
Artículo en Inglés | MEDLINE | ID: mdl-33286599

RESUMEN

We present a hybrid quantum-classical neural network that can be trained to perform electronic structure calculation and generate potential energy curves of simple molecules. The method is based on the combination of parameterized quantum circuits and measurements. With unsupervised training, the neural network can generate electronic potential energy curves based on training at certain bond lengths. To demonstrate the power of the proposed new method, we present the results of using the quantum-classical hybrid neural network to calculate ground state potential energy curves of simple molecules such as H2, LiH, and BeH2. The results are very accurate and the approach could potentially be used to generate complex molecular potential energy surfaces.

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