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1.
Opt Express ; 21(5): 5625-33, 2013 Mar 11.
Artículo en Inglés | MEDLINE | ID: mdl-23482134

RESUMEN

Local distribution of the optical magnetic field is a critical parameter in developing materials with artificially engineered optical properties. Optical magnetic field characterization in nano-scale remains a challenge, because of the weak matter-optical magnetic field interactions. Here, we demonstrate an experimental visualization of the optical magnetic field profiles by raster scanning circular apertures in metal film or in a conical probe. Optical magnetic fields of surface plasmon polaritons and radially polarized beam are visualized by measuring the transmission through metallic apertures, in excellent agreements with theoretical predictions. Our results show that Bethe-Bouwkamp aperture can be used in visualizing optical magnetic field profiles.

2.
Opt Express ; 18(15): 15725-31, 2010 Jul 19.
Artículo en Inglés | MEDLINE | ID: mdl-20720955

RESUMEN

We perform phase-sensitive imaging of optical wavefront emanating from a single nanoslit and propagating into free space by using scattering type near-field scanning optical microscope combined with an optical interferometer. By analyzing polarization resolved optical amplitudes and phases, the propagation directions of surface waves are determined and the phase difference between two orthogonal polarization components of the surface wave are discussed for increasing distance from the slit.

3.
Biochemistry ; 47(11): 3389-96, 2008 Mar 18.
Artículo en Inglés | MEDLINE | ID: mdl-18298084

RESUMEN

Oxytricha nova telomeric DNA contains guanine-rich short-tandem repeat sequences (GGGGTTTT) n and terminates as a single strand at the 3'-end. This single-stranded overhang forms a novel DNA structure, namely, G-quadruplex, comprising four quartets. In this study, we investigated the structures and dynamics of unimolecular Oxytricha nova ( O. nova) telomeric G-quadruplexes by performing single molecule fluorescence resonance energy transfer (FRET) spectroscopy and bulk circular dichroism (CD) measurements. We observed that unimolecular O. nova G-quadruplexes exhibit structural polymorphism according to monovalent cations. In the presence of Na (+), only antiparallel conformation is detected, which was demonstrated in previous studies; however, in the presence of K (+), they fold into two different conformations, a parallel conformation and an antiparallel one different from that induced by Na (+). Furthermore, these G-quadruplexes show extremely high stability in their dynamics when compared with human G-quadruplexes. While human telomeric G-quadruplexes that possess three quartets display fast dynamic behavior (<100 s) at low K (+) concentrations or high temperatures, O. nova G-quadruplexes maintain their conformational state for a long time (>1000 s), even at the lowest K (+) concentration and the highest temperature investigated. This high stability is primarily due to an extra quartet that results in additional cation coordination. In addition to cation coordination, we propose that other factors such as base stacking and the size of the thymine loop may contribute to the stability of O. nova G-quadruplexes; this is based on the fact that the O. nova G-quadruplexes were observed to be more stable than the human ones in the presence of Li (+), which is known to greatly destabilize G-quadruplexes because of imprecise coordination. This extreme stability of four-quartet G-quadruplexes enables telomere protection even in the absence of protective proteins or in the case of abrupt environmental changes, although only a single G-quadruplex structure can be derived from the short single-stranded overhang.


Asunto(s)
G-Cuádruplex , Conformación de Ácido Nucleico , Oxytricha/química , Telómero/química , Termodinámica , Animales , Dicroismo Circular , Transferencia Resonante de Energía de Fluorescencia , Humanos , Litio , Oxytricha/genética , Potasio , Soluciones , Telómero/genética , Timina/química
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