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1.
BMC Genomics ; 21(1): 259, 2020 Mar 30.
Artículo en Inglés | MEDLINE | ID: mdl-32228451

RESUMEN

BACKGROUND: The olive fruit fly, Bactrocera oleae, is the most important pest in the olive fruit agribusiness industry. This is because female flies lay their eggs in the unripe fruits and upon hatching the larvae feed on the fruits thus destroying them. The lack of a high-quality genome and other genomic and transcriptomic data has hindered progress in understanding the fly's biology and proposing alternative control methods to pesticide use. RESULTS: Genomic DNA was sequenced from male and female Demokritos strain flies, maintained in the laboratory for over 45 years. We used short-, mate-pair-, and long-read sequencing technologies to generate a combined male-female genome assembly (GenBank accession GCA_001188975.2). Genomic DNA sequencing from male insects using 10x Genomics linked-reads technology followed by mate-pair and long-read scaffolding and gap-closing generated a highly contiguous 489 Mb genome with a scaffold N50 of 4.69 Mb and L50 of 30 scaffolds (GenBank accession GCA_001188975.4). RNA-seq data generated from 12 tissues and/or developmental stages allowed for genome annotation. Short reads from both males and females and the chromosome quotient method enabled identification of Y-chromosome scaffolds which were extensively validated by PCR. CONCLUSIONS: The high-quality genome generated represents a critical tool in olive fruit fly research. We provide an extensive RNA-seq data set, and genome annotation, critical towards gaining an insight into the biology of the olive fruit fly. In addition, elucidation of Y-chromosome sequences will advance our understanding of the Y-chromosome's organization, function and evolution and is poised to provide avenues for sterile insect technique approaches.


Asunto(s)
Tephritidae/genética , Cromosoma Y/genética , Cromosoma Y/metabolismo , Animales , Femenino , Genoma de los Insectos/genética , Masculino , Reacción en Cadena de la Polimerasa
2.
BMC Genet ; 15 Suppl 2: S16, 2014.
Artículo en Inglés | MEDLINE | ID: mdl-25471636

RESUMEN

BACKGROUND: The Bactrocera dorsalis species complex currently harbors approximately 90 different members. The species complex has undergone many revisions in the past decades, and there is still an ongoing debate about the species limits. The availability of a variety of tools and approaches, such as molecular-genomic and cytogenetic analyses, are expected to shed light on the rather complicated issues of species complexes and incipient speciation. The clarification of genetic relationships among the different members of this complex is a prerequisite for the rational application of sterile insect technique (SIT) approaches for population control. RESULTS: Colonies established in the Insect Pest Control Laboratory (IPCL) (Seibersdorf, Vienna), representing five of the main economic important members of the Bactrocera dorsalis complex were cytologically characterized. The taxa under study were B. dorsalis s.s., B. philippinensis, B. papayae, B. invadens and B. carambolae. Mitotic and polytene chromosome analyses did not reveal any chromosomal characteristics that could be used to distinguish between the investigated members of the B. dorsalis complex. Therefore, their polytene chromosomes can be regarded as homosequential with the reference maps of B. dorsalis s.s.. In situ hybridization of six genes further supported the proposed homosequentiallity of the chromosomes of these specific members of the complex. CONCLUSIONS: The present analysis supports that the polytene chromosomes of the five taxa under study are homosequential. Therefore, the use of the available polytene chromosome maps for B. dorsalis s.s. as reference maps for all these five biological entities is proposed. Present data provide important insight in the genetic relationships among the different members of the B. dorsalis complex, and, along with other studies in the field, can facilitate SIT applications targeting this complex. Moreover, the availability of 'universal' reference polytene chromosome maps for members of the complex, along with the documented application of in situ hybridization, can facilitate ongoing and future genome projects in this complex.


Asunto(s)
Tephritidae/clasificación , Tephritidae/genética , Animales , Mapeo Cromosómico , Cromosomas de Insectos , Análisis Citogenético , Femenino , Hibridación in Situ , Control de Insectos/métodos , Cariotipo , Masculino , Cromosomas Politénicos
3.
Genome ; 57(10): 573-6, 2014 Oct.
Artículo en Inglés | MEDLINE | ID: mdl-25723592

RESUMEN

Four homologous and five heterologous gene-specific sequences have been mapped by in situ hybridization on the salivary gland polytene chromosomes of the olive fruit fly, Bactrocera oleae. The nine genes were dispersed on four of the five autosomal chromosomes, thus enriching the available set of chromosome landmarks for this major agricultural pest. Present data further supports the proposed chromosome homologies among B. oleae, Ceratitis capitata, and Drosophila melanogaster and the idea of the conservation of chromosomal element identity throughout dipteran evolution.


Asunto(s)
Genes de Insecto , Cromosomas Politénicos , Tephritidae/genética , Animales , Mapeo Cromosómico , Genoma de los Insectos
4.
Blood ; 118(11): 3088-95, 2011 Sep 15.
Artículo en Inglés | MEDLINE | ID: mdl-21791422

RESUMEN

We examined 807 productive IGHV-IGHD-IGHJ gene rearrangements from mantle cell lymphoma (MCL) cases, by far the largest series to date. The IGHV gene repertoire was remarkably biased, with IGHV3-21, IGHV4-34, IGHV1-8, and IGHV3-23 accounting for 46.3% of the cohort. Eighty-four of 807 (10.4%) cases, mainly using the IGHV3-21 and IGHV4-34 genes, were found to bear stereotyped heavy complementarity-determining region 3 (VH CDR3) sequences and were placed in 38 clusters. Notably, the MCL stereotypes were distinct from those reported for chronic lymphocytic leukemia. Based on somatic hypermutation (SHM) status, 238/807 sequences (29.5%) carried IGHV genes with 100% germ line identity; the remainder (569/807; 70.5%) exhibited different SHM impact, ranging from minimal (in most cases) to pronounced. Shared replacement mutations across the IGHV gene were identified for certain subgroups, especially those using IGHV3-21, IGHV1-8, and IGHV3-23. Comparison with other entities, in particular CLL, revealed that several of these mutations were "MCL-biased." In conclusion, MCL is characterized by a highly restricted immunoglobulin gene repertoire with stereotyped VH CDR3s and very precise SHM targeting, strongly implying a role for antigen-driven selection of the clonogenic progenitors. Hence, an antigen-driven origin of MCL could be envisaged, at least for subsets of cases.


Asunto(s)
Epítopos/genética , Reordenamiento Génico de Cadena Pesada de Linfocito B , Inmunogenética , Linfoma de Células del Manto/etiología , Linfoma de Células del Manto/inmunología , Secuencia de Aminoácidos , Análisis por Conglomerados , Estudios de Cohortes , Epítopos/fisiología , Reordenamiento Génico de Cadena Pesada de Linfocito B/genética , Reordenamiento Génico de Cadena Pesada de Linfocito B/fisiología , Genes de Inmunoglobulinas/genética , Genes de Inmunoglobulinas/fisiología , Humanos , Inmunogenética/métodos , Cadenas Pesadas de Inmunoglobulina/genética , Región Variable de Inmunoglobulina/genética , Linfoma de Células del Manto/genética , Datos de Secuencia Molecular
5.
Genetica ; 140(4-6): 169-80, 2012 Jun.
Artículo en Inglés | MEDLINE | ID: mdl-22825842

RESUMEN

The olive fruit fly, Bactrocera oleae, has a diploid set of 2n = 12 chromosomes including a pair of sex chromosomes, XX in females and XY in males, but polytene nuclei show only five polytene chromosomes, obviously formed by five autosome pairs. Here we examined the fate of the sex chromosomes in the polytene complements of this species using fluorescence in situ hybridization (FISH) with the X and Y chromosome-derived probes, prepared by laser microdissection of the respective chromosomes from mitotic metaphases. Specificity of the probes was verified by FISH in preparations of mitotic chromosomes. In polytene nuclei, both probes hybridized strongly to a granular heterochromatic network, indicating thus underreplication of the sex chromosomes. The X chromosome probe (in both female and male nuclei) highlighted most of the granular mass, whereas the Y chromosome probe (in male nuclei) identified a small compact body of this heterochromatic network. Additional hybridization signals of the X probe were observed in the centromeric region of polytene chromosome II and in the telomeres of six polytene arms. We also examined distribution of the major ribosomal DNA (rDNA) using FISH with an 18S rDNA probe in both mitotic and polytene chromosome complements of B. oleae. In mitotic metaphases, the probe hybridized exclusively to the sex chromosomes. The probe signals localized a discrete rDNA site at the end of the short arm of the X chromosome, whereas they appeared dispersed over the entire dot-like Y chromosome. In polytene nuclei, the rDNA was found associated with the heterochromatic network representing the sex chromosomes. Only in nuclei with preserved nucleolar structure, the probe signals were scattered in the restricted area of the nucleolus. Thus, our study clearly shows that the granular heterochromatic network of polytene nuclei in B. oleae is formed by the underreplicated sex chromosomes and associated rDNA.


Asunto(s)
ADN Ribosómico/genética , Cromosomas Politénicos , Cromosomas Sexuales , Tephritidae/genética , Animales , Nucléolo Celular/genética , Femenino , Hibridación Fluorescente in Situ , Masculino , Mitosis
6.
Genetica ; 139(11-12): 1449-64, 2011 Dec.
Artículo en Inglés | MEDLINE | ID: mdl-22447527

RESUMEN

The American eastern cherry fruit fly, Rhagoletis cingulata, a pest of cherries in the western hemisphere, invaded Europe in 1983, and since then dispersed to several European countries. Information on the genetics and cytogenetics of this pest is very scarce. The mitotic karyotype and detailed photographic maps of the salivary gland polytene chromosomes of R. cingulata are presented here. The mitotic metaphase complement consists of six pairs of chromosomes with the sex chromosomes being very small and similar in size. The analysis of the salivary gland polytene complement shows a total number of five long chromosomes (10 polytene arms), which correspond to the five autosomes of the mitotic nuclei and an extrachromosomal heterochromatic mass, which corresponds to the sex chromosomes. The banding patterns and the most characteristic features and prominent landmarks of each polytene chromosome are presented and discussed. Chromosomal homologies between R. cingulata, R. completa and R. cerasi are also proposed, based on the comparison of chromosome banding patterns. Furthermore, the detection and characterization of Wolbachia pipientis in the R. cingulata population studied is presented and the potential correlation with the asynaptic phenomena found in its polytene complement is discussed. In addition, 10 out of 24 microsatellite markers developed for other Rhagoletis species are cross-amplified, evaluated and proposed as useful markers for population and genetic studies in R. cingulata.


Asunto(s)
Tephritidae/genética , Alelos , Animales , Cromosomas de Insectos , Análisis Citogenético , Femenino , Genes de Insecto , Cariotipo , Masculino , Repeticiones de Microsatélite , Mitosis , Filogenia , Cromosomas Politénicos , Cromosomas Sexuales
7.
Appl Environ Microbiol ; 75(10): 3281-8, 2009 May.
Artículo en Inglés | MEDLINE | ID: mdl-19304818

RESUMEN

Following cultivation-dependent and -independent techniques, we investigated the microbiota associated with Bactrocera oleae, one of the major agricultural pests in olive-producing countries. Bacterial 16S rRNA gene libraries and ultrastructural analyses revealed the presence of several bacterial taxa associated with this insect, among which Acetobacter tropicalis was predominant. The recent increased detection of acetic acid bacteria as symbionts of other insect model organisms, such as Anopheles stephensi (G. Favia et al., Proc. Natl. Acad. Sci. USA 104:9047-9051, 2007) or Drosophila melanogaster (C. R. Cox and M. S. Gilmore, Infect. Immun. 75:1565-1576, 2007), prompted us to investigate the association established between A. tropicalis and B. oleae. Using an A. tropicalis-specific PCR assay, the symbiont was detected in all insects tested originating from laboratory stocks or field-collected from different locations in Greece. This acetic acid bacterium was successfully established in cell-free medium, and typing analyses, carried out on a collection of isolates, revealed that different A. tropicalis strains are present in fly populations. The capability to colonize and lodge in the digestive system of both larvae and adults and in Malpighian tubules of adults was demonstrated by using a strain labeled with a green fluorescent protein.


Asunto(s)
Acetobacter/aislamiento & purificación , Acetobacter/fisiología , Tracto Gastrointestinal/microbiología , Simbiosis , Tephritidae/microbiología , Acetobacter/clasificación , Acetobacter/genética , Animales , Técnicas de Tipificación Bacteriana , ADN Bacteriano/química , ADN Bacteriano/genética , ADN Ribosómico/química , ADN Ribosómico/genética , Proteínas de Drosophila , Grecia , Larva/microbiología , Túbulos de Malpighi/microbiología , ARN Ribosómico 16S/genética , Análisis de Secuencia de ADN , Homología de Secuencia
8.
BMC Genomics ; 9: 618, 2008 Dec 19.
Artículo en Inglés | MEDLINE | ID: mdl-19099577

RESUMEN

BACKGROUND: The Tephritidae family of insects includes the most important agricultural pests of fruits and vegetables, belonging mainly to four genera (Bactrocera, Ceratitis, Anastrepha and Rhagoletis). The olive fruit fly, Bactrocera oleae, is the major pest of the olive fruit. Currently, its control is based on chemical insecticides. Environmentally friendlier methods have been attempted in the past (Sterile Insect Technique), albeit with limited success. This was mainly attributed to the lack of knowledge on the insect's behaviour, ecology and genetic structure of natural populations. The development of molecular markers could facilitate the access in the genome and contribute to the solution of the aforementioned problems. We chose to focus on microsatellite markers due to their abundance in the genome, high degree of polymorphism and easiness of isolation. RESULTS: Fifty-eight microsatellite-containing clones were isolated from the olive fly, Bactrocera oleae, bearing a total of sixty-two discrete microsatellite motifs. Forty-two primer pairs were designed on the unique sequences flanking the microsatellite motif and thirty-one of them amplified a PCR product of the expected size. The level of polymorphism was evaluated against wild and laboratory flies and the majority of the markers (93.5%) proved highly polymorphic. Thirteen of them presented a unique position on the olive fly polytene chromosomes by in situ hybridization, which can serve as anchors to correlate future genetic and cytological maps of the species, as well as entry points to the genome. Cross-species amplification of these markers to eleven Tephritidae species and sequencing of thirty-one of the amplified products revealed a varying degree of conservation that declines outside the Bactrocera genus. CONCLUSION: Microsatellite markers are very powerful tools for genetic and population analyses, particularly in species deprived of any other means of genetic analysis. The presented set of microsatellite markers possesses all features that would render them useful in such analyses. This could also prove helpful for species where SIT is a desired outcome, since the development of effective SIT can be aided by detailed knowledge at the genetic and molecular level. Furthermore, their presented efficacy in several other species of the Tephritidae family not only makes them useful for their analysis but also provides tools for phylogenetic comparisons among them.


Asunto(s)
Repeticiones de Microsatélite/genética , Tephritidae/genética , Animales , Evolución Molecular , Variación Genética , Genoma de los Insectos , Genotipo , Olea/parasitología , Filogenia , Polimorfismo Genético/genética , Especificidad de la Especie
9.
Sci Rep ; 8(1): 12200, 2018 08 15.
Artículo en Inglés | MEDLINE | ID: mdl-30111795

RESUMEN

Chios mastic products are well-known for their broad applications in food industry, cosmetics, and healthcare since the antiquity. Given our recent finding that Chios mastic water (CMW) exerts antigenotoxic action, in the present study, we evaluated the genotoxic as well as the antigenotoxic potential of the four major compounds of CMW, namely, verbenone, α-terpineol, linalool, and trans-pinocarveol. The cytokinesis block micronucleus (CBMN) assay in cultured human lymphocytes and the Drosophila Somatic Mutation And Recombination Test (SMART), also known as the wing spot test, were employed. None of the four major CMW's constituents or their mixtures showed genotoxic or recombinogenic activity in either of the assays used. Co-treatment of each of the constituents with MMC revealed that all except trans-pinocarveol exerted antigenotoxic potential. Moreover, co-administration of verbenone with linalool or α-terpineol presented statistically significant reduction of MMC-induced mutagenicity. In conclusion, the major CMW constituents were shown to be free of genotoxic effects, while some exerted antigenotoxic activity either alone or in combinations, suggesting synergistic phenomena. Our results provide evidence on the key antigenotoxicity effectors of the plant extract CMW.


Asunto(s)
Linfocitos/efectos de los fármacos , Resina Mástique/farmacología , Extractos Vegetales/farmacología , Monoterpenos Acíclicos , Animales , Monoterpenos Bicíclicos , Monoterpenos Ciclohexánicos , Ciclohexenos/análisis , Ciclohexenos/farmacología , Daño del ADN/efectos de los fármacos , Drosophila melanogaster/genética , Humanos , Pruebas de Micronúcleos/métodos , Monoterpenos/análisis , Monoterpenos/farmacología , Mutagénesis/efectos de los fármacos , Pruebas de Mutagenicidad/métodos , Mutágenos/farmacología , Pistacia/toxicidad , Recombinación Genética/efectos de los fármacos , Terpenos/análisis , Terpenos/farmacología , Agua/química , Agua/farmacología , Alas de Animales/efectos de los fármacos
10.
Sci Rep ; 7(1): 4877, 2017 07 07.
Artículo en Inglés | MEDLINE | ID: mdl-28687799

RESUMEN

Ceratitis fasciventris is a serious agricultural pest of the Tephritidae family that belongs to the African Ceratitis FAR species complex. Species limits within the FAR complex are obscure and multidisciplinary approaches have attempted to resolve phylogenetic relationships among its members. These studies support the existence of at least three additional species in the complex, C. anonnae, C. rosa and C. quilicii, while they indicate the presence of two structured populations (F1 and F2) within the C. fasciventris species. In the present study we present the mitotic karyotype, polytene chromosome maps, in situ hybridization data and the complete mitochondrial genome sequence of an F2 population of C. fasciventris. This is the first polytene chromosome map and complete mitogenome of a member of the FAR complex and only the second reported for the Ceratitis genus. Both polytene chromosomes and mitochondrial sequence could provide valuable information and be used as reference for comparative analysis among the members of the complex towards the clarification of their phylogenetic relationships.


Asunto(s)
Filogenia , Cromosomas Politénicos , Tephritidae/clasificación , Tephritidae/genética , Animales , ADN Mitocondrial/química , ADN Mitocondrial/genética , Hibridación in Situ , Cariotipificación , Análisis de Secuencia de ADN
11.
J Hazard Mater ; 333: 339-347, 2017 Jul 05.
Artículo en Inglés | MEDLINE | ID: mdl-28380406

RESUMEN

The present study investigated [omim][BF4]-mediated adverse effects on biological models widely used in toxicological studies. Specifically, mussels of the genus Mytilus, human lymphocytes and fruit flies of the species Drosophila melanogaster, were exposed to [omim][BF4] at concentrations ranging from micro- to milligrams per liter, with or without the presence of acetone as a carrier solvent and thereafter [omim][BF4]-mediated adverse effects were analyzed appropriately (stress indices, such as lipid peroxidation byproducts, acetylcholinesterase/AChE activity and micronucleus/MN formation frequency, in mussel gills, Cytokinesis Block Micronucleus/CBMN assay and SMART test in human lymphocytes and fruit flies respectively). LC-MS-TOF analysis was also performed for elucidating [omim][BF4] mode of action in the presence of the carrier solvent. The results showed the toxic potential of [omim][BF4], as well as acetone's ability to attenuate [omim][BF4]-mediated toxicity in almost all cases, probably due to the significant effect of acetone on the hydrophilic-lipophilic character and the viscosity of [omim][BF4], as well as its interaction and permeability on the cell membranes. The slight involvement of acetone in the attenuation of [omim][BF4]-mediated genotoxic effects on D. melanogaster could be due to species feeding experimental conditions, thus favoring the induction of antioxidant defense system against the [omim][BF4]-mediated effects in all cases.


Asunto(s)
Acetona/farmacología , Bivalvos/efectos de los fármacos , Drosophila melanogaster/efectos de los fármacos , Imidazoles/toxicidad , Linfocitos/efectos de los fármacos , Mutágenos/toxicidad , Acetilcolinesterasa/metabolismo , Animales , Cromatografía Liquida , Branquias/efectos de los fármacos , Humanos , Imidazoles/antagonistas & inhibidores , Peroxidación de Lípido/efectos de los fármacos , Espectrometría de Masas , Pruebas de Micronúcleos , Mutación , Recombinación Genética , Estrés Fisiológico/efectos de los fármacos
12.
PLoS One ; 11(6): e0157192, 2016.
Artículo en Inglés | MEDLINE | ID: mdl-27362546

RESUMEN

Genetic and cytogenetic studies constitute a significant basis for understanding the biology of insect pests and the design and the construction of genetic tools for biological control strategies. Anastrepha fraterculus is an important pest of the Tephritidae family. It is distributed from southern Texas through eastern Mexico, Central America and South America causing significant crop damage and economic losses. Currently it is considered as a species complex; until now seven members have been described based on multidisciplinary approaches. Here we report the cytogenetic analysis of an Argentinian population characterized as Af. sp.1 member of the Anastrepha fraterculus species complex. The mitotic karyotype and the first detailed photographic maps of the salivary gland polytene chromosomes are presented. The mitotic metaphase complement consists of six (6) pairs of chromosomes, including one pair of heteromorphic sex chromosomes, with the male being the heterogametic sex. The analysis of the salivary gland polytene complement shows a total number of five long chromosomes that correspond to the five autosomes of the mitotic karyotype and a heterochromatic network corresponding to the sex chromosomes. Comparison of the polytene chromosome maps between this species and Anastrepha ludens shows significant similarity. The polytene maps presented here are suitable for cytogenetic studies that could shed light on the species limits within this species complex and support the development of genetic tools for sterile insect technique (SIT) applications.


Asunto(s)
Cromosomas de Insectos , Cromosomas Politénicos , Tephritidae/genética , Animales , Bandeo Cromosómico , Mapeo Cromosómico , Análisis Citogenético , Femenino , Cariotipo , Cariotipificación , Masculino , Mitosis , Glándulas Salivales
13.
Food Chem Toxicol ; 85: 114-9, 2015 Nov.
Artículo en Inglés | MEDLINE | ID: mdl-26169716

RESUMEN

Silver nanoparticles (AgNPs) with antimicrobial activity are by far the most commercialized nano-compound. They are commonly used in medical products and devices, food storage materials, cosmetics and industrial products. Despite the increasing human exposure to AgNPs, they remain a controversial research area with regard to their toxic and genotoxic effects to biological systems. Although previous data have suggested that AgNPs induce toxicity in vitro, the in vivo studies on this topic are very limited. In the present study, the potential genotoxic activity of AgNPs of different sizes (4.7 and 42 nm) was evaluated using the in vivo Somatic Mutation and Recombination Test (SMART) in Drosophila melanogaster. Larvae were treated with 25, 30 and 50 µg/ml of AgNPs 4.7 nm, and 250, 500 and 1000 µg/ml of AgNPs 42 nm. Data showed that AgNPs at the applied concentrations did not modify the spontaneous frequencies of spots indicating lack of mutagenic and recombinogenic activity. However, both AgNPs induced pigmentation defects and reduction in locomotor ability in adult flies. Therefore, further experiments must be carried out to gain a better understanding of the mechanism of action of AgNPs to ensure their safe use.


Asunto(s)
Drosophila melanogaster/efectos de los fármacos , Contaminantes Ambientales/toxicidad , Nanopartículas del Metal/toxicidad , Mutágenos/toxicidad , Mutación/efectos de los fármacos , Recombinación Genética/efectos de los fármacos , Plata/toxicidad , Administración Oral , Animales , Animales Modificados Genéticamente , Antiinfecciosos/administración & dosificación , Antiinfecciosos/química , Antiinfecciosos/toxicidad , Cruzamientos Genéticos , Relación Dosis-Respuesta a Droga , Drosophila melanogaster/genética , Drosophila melanogaster/crecimiento & desarrollo , Contaminantes Ambientales/administración & dosificación , Contaminantes Ambientales/química , Larva/efectos de los fármacos , Larva/genética , Larva/crecimiento & desarrollo , Locomoción/efectos de los fármacos , Nanopartículas del Metal/administración & dosificación , Nanopartículas del Metal/química , Nanopartículas del Metal/ultraestructura , Microscopía Electrónica de Transmisión , Pruebas de Mutagenicidad , Mutágenos/administración & dosificación , Mutágenos/química , Tamaño de la Partícula , Pigmentación/efectos de los fármacos , Plata/administración & dosificación , Plata/química , Alas de Animales
14.
PLoS One ; 10(9): e0137050, 2015.
Artículo en Inglés | MEDLINE | ID: mdl-26398504

RESUMEN

Sex chromosomes have many unusual features relative to autosomes. The in depth exploration of their structure will improve our understanding of their origin and divergence (degeneration) as well as the evolution of genetic sex determination pathways which, most often are attributed to them. In Tephritids, the structure of Y chromosome, where the male-determining factor M is localized, is largely unexplored and limited data concerning its sequence content and evolution are available. In order to get insight into the structure and organization of the Y chromosome of the major olive insect pest, the olive fly Bactrocera oleae, we characterized sequences from a Pulse Field Gel Electrophoresis (PFGE)-isolated Y chromosome. Here, we report the discovery of the first olive fly LTR retrotransposon with increased presence on the Y chromosome. The element belongs to the BEL-Pao superfamily, however, its sequence comparison with the other members of the superfamily suggests that it constitutes a new family that we termed Achilles. Its ~7.5 kb sequence consists of the 5'LTR, the 5'non-coding sequence and the open reading frame (ORF), which encodes the polyprotein Gag-Pol. In situ hybridization to the B. oleae polytene chromosomes showed that Achilles is distributed in discrete bands dispersed on all five autosomes, in all centromeric regions and in the granular heterochromatic network corresponding to the mitotic sex chromosomes. The between sexes comparison revealed a variation in Achilles copy number, with male flies possessing 5-10 copies more than female (CI range: 18-38 and 12-33 copies respectively per genome). The examination of its transcriptional activity demonstrated the presence of at least one intact active copy in the genome, showing a differential level of expression between sexes as well as during embryonic development. The higher expression was detected in male germline tissues (testes). Moreover, the presence of Achilles-like elements in different species of the Tephritidae family suggests an ancient origin of this element.


Asunto(s)
Proteínas de Insectos/genética , Retroelementos , Tephritidae/genética , Transcripción Genética , Cromosoma Y/genética , Secuencia de Aminoácidos , Animales , Proteasas de Ácido Aspártico/química , Proteasas de Ácido Aspártico/genética , Proteasas de Ácido Aspártico/metabolismo , Dosificación de Gen , Genoma de los Insectos , Proteínas de Insectos/química , Proteínas de Insectos/metabolismo , Datos de Secuencia Molecular , Filogenia , Tephritidae/metabolismo , Activación Transcripcional
15.
PLoS One ; 10(6): e0130498, 2015.
Artículo en Inglés | MEDLINE | ID: mdl-26110900

RESUMEN

Chios mastic oil (CMO), the essential oil derived from Pistacia lentiscus (L.) var. chia (Duham), has generated considerable interest because of its antimicrobial, anticancer, antioxidant and other beneficial properties. In the present study, the potential genotoxic activity of CMO as well as its antigenotoxic properties against the mutagenic agent mitomycin-C (MMC) were evaluated by employing the in vitro Cytokinesis Block MicroNucleus (CBMN) assay and the in vivo Somatic Mutation And Recombination Test (SMART). In the in vitro experiments, lymphocytes were treated with 0.01, 0.05 and 0.10% (v/v) of CMO with or without 0.05 µg/ml MMC, while in the in vivo assay Drosophila larvae were fed with 0.05, 0.10, 0.50 and 1.00% (v/v) of CMO with or without 2.50 µg/ml MMC. CMO did not significantly increase the frequency of micronuclei (MN) or total wing spots, indicating lack of mutagenic or recombinogenic activity. However, the in vitro analysis suggested cytotoxic activity of CMO. The simultaneous administration of MMC with CMO did not alter considerably the frequencies of MMC-induced MN and wing spots showing that CMO doesn't exert antigenotoxic or antirecombinogenic action. Therefore, CMO could be considered as a safe product in terms of genotoxic potential. Even though it could not afford any protection against DNA damage, at least under our experimental conditions, its cytotoxic potential could be of interest.


Asunto(s)
Daño del ADN/efectos de los fármacos , Linfocitos/efectos de los fármacos , Pistacia/química , Animales , Humanos , Pruebas de Micronúcleos , Mitomicina/toxicidad , Pruebas de Mutagenicidad , Aceites de Plantas/administración & dosificación , Aceites de Plantas/química , Sustancias Protectoras , Alas de Animales/efectos de los fármacos
16.
Ecol Evol ; 4(10): 1943-62, 2014 May.
Artículo en Inglés | MEDLINE | ID: mdl-24963388

RESUMEN

Rhagoletis cerasi (Diptera: Tephritidae) is a major pest of sweet and sour cherries in Europe and parts of Asia. Despite its economic significance, there is a lack of studies on the genetic structure of R. cerasi populations. Elucidating the genetic structure of insects of economic importance is crucial for developing phenological-predictive models and environmental friendly control methods. All natural populations of R. cerasi have been found to harbor the endosymbiont Wolbachia pipientis, which widely affects multiple biological traits contributing to the evolution of its hosts, and has been suggested as a tool for the biological control of insect pests and disease vectors. In the current study, the analysis of 18 R. cerasi populations collected in Greece, Germany, and Russia using 13 microsatellite markers revealed structuring of R. cerasi natural populations, even at close geographic range. We also analyzed the Wolbachia infection status of these populations using 16S rRNA-, MLST- and wsp-based approaches. All 244 individuals screened were positive for Wolbachia. Our results suggest the fixation of the wCer1 strain in Greece while wCer2, wCer4, wCer5, and probably other uncharacterized strains were also detected in multiply infected individuals. The role of Wolbachia and its potential extended phenotypes needs a thorough investigation in R. cerasi. Our data suggest an involvement of this symbiont in the observed restriction in the gene flow in addition to a number of different ecological factors.

17.
PLoS One ; 8(11): e79393, 2013.
Artículo en Inglés | MEDLINE | ID: mdl-24244494

RESUMEN

Satellite repetitive sequences that accumulate in the heterochromatin consist a large fraction of a genome and due to their properties are suggested to be implicated in centromere function. Current knowledge of heterochromatic regions of Bactrocera oleae genome, the major pest of the olive tree, is practically nonexistent. In our effort to explore the repetitive DNA portion of B. oleae genome, a novel satellite sequence designated BoR300 was isolated and cloned. The present study describes the genomic organization, abundance and chromosomal distribution of BoR300 which is organized in tandem, forming arrays of 298 bp-long monomers. Sequence analysis showed an AT content of 60.4%, a CENP-B like-motif and a high curvature value based on predictive models. Comparative analysis among randomly selected monomers demonstrated a high degree of sequence homogeneity (88%-97%) of BoR300 repeats, which are present at approximately 3,000 copies per haploid genome accounting for about 0.28% of the total genomic DNA, based on two independent qPCR approaches. In addition, expression of the repeat was also confirmed through RT-PCR, by which BoR300 transcripts were detected in both sexes. Fluorescence in situ hybridization (FISH) of BoR300 on mitotic metaphases and polytene chromosomes revealed signals to the centromeres of two out of the six chromosomes which indicated a chromosome-specific centromeric localization. Moreover, BoR300 is not conserved in the closely related Bactrocera species tested and it is also absent in other dipterans, but it's rather restricted to the B. oleae genome. This feature of species-specificity attributed to BoR300 satellite makes it a good candidate as an identification probe of the insect among its relatives at early development stages.


Asunto(s)
Centrómero/genética , ADN Satélite/genética , Tephritidae/genética , Transcripción Genética , Animales , Secuencia de Bases , Mapeo Cromosómico , ADN Satélite/química , Hibridación Fluorescente in Situ , Datos de Secuencia Molecular , Motivos de Nucleótidos , Alineación de Secuencia , Especificidad de la Especie
18.
PLoS One ; 8(7): e69494, 2013.
Artículo en Inglés | MEDLINE | ID: mdl-23936030

RESUMEN

Chios mastic gum, a plant-derived product obtained by the Mediterranean bush Pistacia lentiscus (L.) var. chia (Duham), has generated considerable interest because of its antimicrobial, anticancer, antioxidant and other beneficial properties. Its aqueous extract, called Chios mastic water (CMW), contains the authentic mastic scent and all the water soluble components of mastic. In the present study, the potential genotoxic activity of CMW, as well as its antigenotoxic properties against the mutagenic agent mitomycin-C (MMC), was evaluated by employing the in vitro Cytokinesis Block MicroNucleus (CBMN) assay and the in vivo Somatic Mutation And Recombination Test (SMART). In the former assay, lymphocytes were treated with 1, 2 and 5% (v/v) of CMW with or without MMC at concentrations 0.05 and 0.50 µg/ml. No significant micronucleus induction was observed by CMW, while co-treatment with MMC led to a decrease of the MMC-induced micronuclei, which ranged between 22.8 and 44.7%. For SMART, larvae were treated with 50 and 100% (v/v) CMW with or without MMC at concentrations 1.00, 2.50 and 5.00 µg/ml. It was shown that CMW alone did not modify the spontaneous frequencies of spots indicating lack of genotoxic activity. Τhe simultaneous administration of MMC with 100% CMW led to considerable alterations of the frequencies of MMC-induced wing spots with the total mutant clones showing reduction between 53.5 and 74.4%. Our data clearly show a protective role of CMW against the MMC-induced genotoxicity and further research on the beneficial properties of this product is suggested.


Asunto(s)
Drosophila melanogaster/efectos de los fármacos , Linfocitos/efectos de los fármacos , Mutágenos/toxicidad , Extractos Vegetales/farmacología , Alas de Animales/efectos de los fármacos , Animales , Humanos , Pruebas de Micronúcleos , Mitomicina/toxicidad , Mutación/genética , Recombinación Genética/genética
19.
Pest Manag Sci ; 67(12): 1534-40, 2011 Dec.
Artículo en Inglés | MEDLINE | ID: mdl-21626654

RESUMEN

BACKGROUND: The insecticides spinosad and deltamethrin are being increasingly used in pest management programmes. In order to assess further their toxic effects to target and non-target insect species, an evaluation was made of their insecticidal profile on Bactrocera oleae (Rossi) and Drosophila melanogaster (Meig.). Moreover, possible genotoxic effects of the two pesticides were investigated using the somatic mutation and recombination test (SMART) in D. melanogaster. RESULTS: Both insecticides were highly effective against B. oleae, exhibiting similar LC(50) values. Moreover, they were found to be more effective against Bactrocera than against Drosophila adults. However, spinosad was significantly more toxic than deltamethrin to D. melanogaster. The results showed a lack of genotoxic activity of both insecticides under the in vivo experimental procedure employed, at least at applied doses. CONCLUSION: The present study provides information for lethal and sublethal effects of spinosad and deltamethrin against a target and a non-target species. Both insecticides can exert high toxicity to B. oleae when adults are exposed even to very low doses for long periods of time. The results contribute to the database on the genotoxic potential of spinosad and deltamethrin, suggesting a safety profile for both insecticides.


Asunto(s)
Drosophila melanogaster/efectos de los fármacos , Insecticidas/toxicidad , Macrólidos/toxicidad , Nitrilos/toxicidad , Piretrinas/toxicidad , Tephritidae/efectos de los fármacos , Animales , Combinación de Medicamentos , Larva/efectos de los fármacos , Dosificación Letal Mediana , Pruebas de Mutagenicidad/métodos , Factores de Tiempo
20.
Genome ; 52(2): 210-4, 2009 Feb.
Artículo en Inglés | MEDLINE | ID: mdl-19234568

RESUMEN

A Bactrocera oleae genomic library was constructed and several genomic clones bearing hsp70 sequences were isolated. All clones were in situ hybridized on the major heat shock puff locus of the salivary gland polytene chromosomes. Restriction mapping of the isolated clones and genomic Southern hybridization indicated the presence of several putative hsp70 genes organized in a single cluster. Sequence analysis of an hsp70 transcription unit revealed a single 1905 nt long open reading frame that exhibits characteristic features of the inducible members of the HSP70 family. The presence and organization of many typical binding sites for the Heat Shock and GAGA factors suggest that the promoter of this gene is highly heat-inducible and could be used for conditional expression in transformation systems.


Asunto(s)
Genes de Insecto , Genoma de los Insectos/genética , Proteínas HSP70 de Choque Térmico/genética , Regiones Promotoras Genéticas/genética , Tephritidae/genética , Transcripción Genética/genética , Animales , Olea/parasitología
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