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1.
J Enzyme Inhib Med Chem ; 37(1): 252-268, 2022 Dec.
Artículo en Inglés | MEDLINE | ID: mdl-34933639

RESUMEN

New polycyclic heterocycles were synthesised and evaluated as potential inhibitors of thymidine phosphorylase (TP). Inspired by the pharmacophoric pyrimidinedione core of the natural substrate, four series have been designed in order to interact with large empty pockets of the active site: pyrimidoquinoline-2,4-diones (series A), pyrimidinedione linked to a pyrroloquinoline-1,3-diones (series B and C), the polycyclic heterocycle has been replaced by a pyrimidopyridopyrrolidinetetraone (series D). In each series, the tricyclic nitrogen heterocyclic moiety has been synthesised by a one-pot multicomponent reaction. Compared to 7-DX used as control, 2d, 2l, 2p (series A), 28a (series D), and the open intermediate 30 showed modest to good activities. A kinetic study confirmed that the most active compounds 2d, 2p are competitive inhibitors. Molecular docking analysis confirmed the interaction of these new compounds at the active binding site of TP and highlighted a plausible specific interaction in a pocket that had not yet been explored.


Asunto(s)
Inhibidores Enzimáticos/farmacología , Compuestos Heterocíclicos/farmacología , Simulación del Acoplamiento Molecular , Nitrógeno/farmacología , Compuestos Policíclicos/farmacología , Timidina Fosforilasa/antagonistas & inhibidores , Línea Celular , Supervivencia Celular/efectos de los fármacos , Relación Dosis-Respuesta a Droga , Inhibidores Enzimáticos/síntesis química , Inhibidores Enzimáticos/química , Compuestos Heterocíclicos/síntesis química , Compuestos Heterocíclicos/química , Humanos , Estructura Molecular , Nitrógeno/química , Compuestos Policíclicos/síntesis química , Compuestos Policíclicos/química , Relación Estructura-Actividad , Timidina Fosforilasa/metabolismo
2.
Proteins ; 85(4): 593-601, 2017 04.
Artículo en Inglés | MEDLINE | ID: mdl-28056492

RESUMEN

CDC25 phosphatases play a crucial role in cell cycle regulation. They have been found to be over-expressed in various human tumours and to be valuable targets for cancer treatment. Here, we report the first model of binding of the most potent CDC25 inhibitor to date, the bis-quinone IRC-083864, into CDC25B obtained by combining molecular modeling and NMR studies. Our study provides new insights into key interactions of the catalytic site inhibitor and CDC25B in the absence of any available experimental structure of CDC25 with a bound catalytic site inhibitor. The docking model reveals that IRC-083864 occupies both the active site and the inhibitor binding pocket of the CDC25B catalytic domain. NMR saturation transfer difference and WaterLOGSY data indicate the binding zones of the inhibitor and support the docking model. Probing interactions of analogues of the two quinone units of IRC-083864 with CDC25B demonstrate that IRC-083864 competes with each monomer. Proteins 2017; 85:593-601. © 2016 Wiley Periodicals, Inc.


Asunto(s)
Antineoplásicos/química , Benzotiazoles/química , Benzoxazoles/química , Inhibidores Enzimáticos/química , Fosfatasas cdc25/antagonistas & inhibidores , Antineoplásicos/síntesis química , Benzotiazoles/síntesis química , Benzoxazoles/síntesis química , Dominio Catalítico , Clonación Molecular , Inhibidores Enzimáticos/síntesis química , Escherichia coli/genética , Escherichia coli/metabolismo , Expresión Génica , Humanos , Simulación del Acoplamiento Molecular , Resonancia Magnética Nuclear Biomolecular , Unión Proteica , Dominios y Motivos de Interacción de Proteínas , Estructura Secundaria de Proteína , Proteínas Recombinantes de Fusión/química , Proteínas Recombinantes de Fusión/genética , Proteínas Recombinantes de Fusión/metabolismo , Fosfatasas cdc25/química , Fosfatasas cdc25/genética , Fosfatasas cdc25/metabolismo
3.
J Mol Recognit ; 30(1)2017 01.
Artículo en Inglés | MEDLINE | ID: mdl-27507710

RESUMEN

Hepcidin, a liver-expressed antimicrobial peptide, has been demonstrated to act as an iron regulatory hormone as well as to exert a wide spectrum of antimicrobial activity. The aim of this work was the expression, as secreted peptide, purification, and characterization of a new recombinant polyHis-tagged camel hepcidin (HepcD-His) in yeast Pichia pastoris. The use of this eukaryotic expression system, for the production of HepcD-His, having 6 histidine residues at its C terminus, was simpler and more efficient compared with the use of the prokaryotic system Escherichia coli. Indeed, a single purification step was required to isolate the soluble hepcidin with purity estimated more that 94% and a yield of 2.8 against 0.2 mg/L for the E coli system. Matrix-assisted laser desorption/ionization time-of-flight (TOF)/TOF mass spectrometry of the purified HepcD-His showed 2 major peaks at m/z 4524.64 and 4634.56 corresponding to camel hepcidin with 39 and 40 amino acids. Evaluation of disulfide bond connectivity with the Ellman method showed an absence of free thiol groups, testifying that the 8 cysteine residues in the peptide are displayed, forming 4 disulfide bridges. Circular dichroism spectroscopy showed that camel hepcidin structure was significantly modified at high temperature of 90°C and returns to its original structure when incubation temperature drops back to 20°C. Interestingly, this peptide showed also a greater bactericidal activity, at low concentration of 9.5µM, against E coli, than the synthetic analog DH3. Thus, the production, at a large scale, of the recombinant camel hepcidin, HepcD-His, may be helpful for future therapeutic applications including bacterial infection diseases.


Asunto(s)
Hepcidinas/química , Hepcidinas/aislamiento & purificación , Histidina/química , Pichia/genética , Animales , Camelus , Dicroismo Circular , Clonación Molecular , Disulfuros/química , Escherichia coli/efectos de los fármacos , Hepcidinas/genética , Hepcidinas/farmacología , Modelos Moleculares , Pichia/metabolismo , Conformación Proteica , Proteínas Recombinantes/química , Proteínas Recombinantes/genética , Proteínas Recombinantes/aislamiento & purificación , Proteínas Recombinantes/farmacología , Espectrometría de Masa por Láser de Matriz Asistida de Ionización Desorción , Termodinámica
4.
J Am Soc Nephrol ; 27(3): 835-46, 2016 Mar.
Artículo en Inglés | MEDLINE | ID: mdl-26293821

RESUMEN

The iron-regulatory peptide hepcidin exhibits antimicrobial activity. Having previously shown hepcidin expression in the kidney, we addressed its role in urinary tract infection (UTI), which remains largely unknown. Experimental UTI was induced in wild-type (WT) and hepcidin-knockout (Hepc-/-) mice using the uropathogenic Escherichia coli CFT073 strain. Compared with infected WT mice, infected Hepc-/- mice showed a dramatic increase in renal bacterial load. Moreover, bacterial invasion was significantly dampened by the pretreatment of WT mice with hepcidin. Infected Hepc-/- mice exhibited decreased iron accumulation in the renal medulla and significant attenuation of the renal inflammatory response. Notably, we demonstrated in vitro bacteriostatic activity of hepcidin against CFT073. Furthermore, CFT073 repressed renal hepcidin, both in vivo and in cultured renal cells, and reduced phosphorylation of SMAD kinase in vivo, suggesting a bacterial strategy to escape the antimicrobial activities of hepcidin. In conclusion, we provide new mechanisms by which hepcidin contributes to renal host defense and suggest that targeting hepcidin offers a strategy to prevent bacterial invasion.


Asunto(s)
Antiinfecciosos/farmacología , Infecciones por Escherichia coli/metabolismo , Escherichia coli/efectos de los fármacos , Hepcidinas/metabolismo , Hepcidinas/farmacología , Infecciones Urinarias/metabolismo , Animales , Antiinfecciosos/metabolismo , Carga Bacteriana/genética , Células Cultivadas , Recuento de Colonia Microbiana , Citocinas/metabolismo , Infecciones por Escherichia coli/microbiología , Femenino , Hepcidinas/genética , Hierro/metabolismo , Médula Renal/citología , Médula Renal/metabolismo , Médula Renal/microbiología , Ratones , Ratones Endogámicos CBA , Ratones Noqueados , Nefritis/metabolismo , Nefritis/microbiología , Nefritis/patología , Neutrófilos , Fosforilación , ARN Mensajero/metabolismo , Factor de Transcripción STAT3/metabolismo , Transducción de Señal , Proteínas Smad/metabolismo , Infecciones Urinarias/microbiología
5.
Protein Expr Purif ; 115: 11-8, 2015 Nov.
Artículo en Inglés | MEDLINE | ID: mdl-26169129

RESUMEN

Hepcidin, a 25-amino-acid and highly disulfide bonded antimicrobial peptide, is the central regulator of iron homeostasis. This hormone is expressed in response to iron and inflammation and interacts with ferroportin1 (FPN1), the only known iron exporter in vertebrates, inducing its internalization and degradation. Thus, the export of iron from cells to plasma will be significantly diminished. Thereby, hepcidin has become the target of intense research studies due to its profound biomedical significance. This study describes the functional expression of recombinant camel hepcidin in Escherichia coli. Biologically active recombinant camel hepcidin was obtained thanks to the production of a hepcidin-thioredoxin fusion protein (TRX-HepcD) and a purified camel hepcidin, with an extra methionine at the N-terminus, was obtained after enterokinase cleavage of the fusion protein. Presence of the four disulfide bridges was verified using MALDI-ToF spectrometry. The recombinant camel hepcidin was compared to related synthetic bioactive peptides, including human hepcidin, and was found equally able to promote ferroportin degradation of mouse macrophages. Furthermore, camel hepcidins exhibits a high capacity to inhibit the growth of Leishmania major promastigotes. These results proved that production of functional camel hepcidin can be achieved in E. coli, this is a major interest for the production of cysteine rich peptides or proteins that can be purified under their functional form without the need of a refolding process.


Asunto(s)
Proteínas de Transporte de Catión/metabolismo , Hepcidinas/aislamiento & purificación , Hepcidinas/metabolismo , Proteínas Recombinantes/aislamiento & purificación , Proteínas Recombinantes/metabolismo , Secuencia de Aminoácidos , Animales , Camelus/genética , Proteínas de Transporte de Catión/química , Disulfuros/química , Escherichia coli/genética , Hepcidinas/química , Hepcidinas/genética , Humanos , Macrófagos/química , Macrófagos/metabolismo , Ratones , Datos de Secuencia Molecular , Plásmidos , Proteínas Recombinantes/química , Proteínas Recombinantes/genética , Espectrometría de Masa por Láser de Matriz Asistida de Ionización Desorción
6.
J Biol Chem ; 288(35): 25450-25465, 2013 Aug 30.
Artículo en Inglés | MEDLINE | ID: mdl-23846698

RESUMEN

Hepcidin regulates iron metabolism by down-regulating ferroportin-1 (Fpn1). We demonstrated that hepcidin is complexed to the blood transport protein, α2-macroglobulin (α2M) (Peslova, G., Petrak, J., Kuzelova, K., Hrdy, I., Halada, P., Kuchel, P. W., Soe-Lin, S., Ponka, P., Sutak, R., Becker, E., Huang, M. L., Suryo Rahmanto, Y., Richardson, D. R., and Vyoral, D. (2009) Blood 113, 6225-6236). However, nothing is known about the mechanism of hepcidin binding to α2M or the effects of the α2M·hepcidin complex in vivo. We show that decreased Fpn1 expression can be mediated by hepcidin bound to native α2M and also, for the first time, hepcidin bound to methylamine-activated α2M (α2M-MA). Passage of high molecular weight α2M·hepcidin or α2M-MA·hepcidin complexes (≈725 kDa) through a Sephadex G-25 size exclusion column retained their ability to decrease Fpn1 expression. Further studies using ultrafiltration indicated that hepcidin binding to α2M and α2M-MA was labile, resulting in some release from the protein, and this may explain its urinary excretion. To determine whether α2M-MA·hepcidin is delivered to cells via the α2M receptor (Lrp1), we assessed α2M uptake and Fpn1 expression in Lrp1(-/-) and Lrp1(+/+) cells. Interestingly, α2M·hepcidin or α2M-MA·hepcidin demonstrated similar activities at decreasing Fpn1 expression in Lrp1(-/-) and Lrp1(+/+) cells, indicating that Lrp1 is not essential for Fpn1 regulation. In vivo, hepcidin bound to α2M or α2M-MA did not affect plasma clearance of α2M/α2M-MA. However, serum iron levels were reduced to a significantly greater extent in mice treated with α2M·hepcidin or α2M-MA·hepcidin relative to unbound hepcidin. This effect could be mediated by the ability of α2M or α2M-MA to retard kidney filtration of bound hepcidin, increasing its half-life. A model is proposed that suggests that unlike proteases, which are irreversibly bound to activated α2M, hepcidin remains labile and available to down-regulate Fpn1.


Asunto(s)
Proteínas de Transporte de Catión/biosíntesis , Regulación de la Expresión Génica/fisiología , Hepcidinas/sangre , Hierro/sangre , Modelos Biológicos , Complejos Multiproteicos/sangre , alfa-Macroglobulinas/metabolismo , Animales , Proteínas de Transporte de Catión/genética , Línea Celular , Hepcidinas/genética , Humanos , Proteína 1 Relacionada con Receptor de Lipoproteína de Baja Densidad/genética , Proteína 1 Relacionada con Receptor de Lipoproteína de Baja Densidad/metabolismo , Ratones , Ratones Noqueados , Complejos Multiproteicos/genética , Receptores de LDL/genética , Receptores de LDL/metabolismo , Proteínas Supresoras de Tumor/genética , Proteínas Supresoras de Tumor/metabolismo , alfa-Macroglobulinas/genética
7.
J Pept Sci ; 20(9): 680-8, 2014 Sep.
Artículo en Inglés | MEDLINE | ID: mdl-24895313

RESUMEN

Hepcidin is a cysteine-rich peptide widely characterized in immunological processes and antimicrobial activity in several vertebrate species. Obviously, this hormone plays a central role in the regulation of systemic iron homeostasis. However, its role in camelids' immune response and whether it is involved in antibacterial immunity have not yet been proven. In this study, we characterized the Arabian camel hepcidin nucleotide sequence with an open reading frame of 252 bp encoding an 83-amino acid preprohepcidin peptide. Eight cysteine key residues conserved in all mammalian hepcidin sequences were identified. The model structure analysis of hepcidin-25 peptide showed a high homology structure and sequence identity to the human hepcidin. Two different hepcidin-25 analogs manually synthesized by SPPS shared significant cytotoxic capacity toward the Gram-negative bacterium Escherichia coli American Type Culture Collection (ATCC) 8739 as well as the Gram-positive bacteria Bacillus subtilis ATCC 11779 and Staphylococcus aureus ATCC 6538 in vitro. The three disulfide bridges hepcidin analog demonstrated bactericidal activity, against B. subtilis ATCC 11779 and S. aureus ATCC 6538 strains, at the concentration of 15 µM (50 µg/ml) or above at pH 6.2. This result correlates with the revealed structural features suggesting that camel hepcidin is proposed to be involved in antibacterial process of innate immune response.


Asunto(s)
Antibacterianos , Bacterias/crecimiento & desarrollo , Hepcidinas , Animales , Antibacterianos/síntesis química , Antibacterianos/química , Antibacterianos/farmacología , Secuencia de Bases , Camelus , Clonación Molecular , Disulfuros/química , Hepcidinas/síntesis química , Hepcidinas/química , Hepcidinas/genética , Hepcidinas/farmacología , Humanos , Datos de Secuencia Molecular , Sistemas de Lectura Abierta
9.
Toxicology ; 487: 153467, 2023 03 15.
Artículo en Inglés | MEDLINE | ID: mdl-36842454

RESUMEN

Parkinson's disease is a severe neurodegenerative disease. Several environmental contaminants such as pesticides have been suspected to favor the appearance of this pathology. The protein DJ-1 (or Park7) protects against the development of Parkinson's disease. Thus, the possible inhibitory effects of about a hundred pesticides on human DJ-1 have been studied. We identified fifteen of them as strong inhibitors of DJ-1 with IC50 values between 0.02 and 30 µM. Thiocarbamates are particularly good inhibitors, as shown by thiram that acts as an irreversible inhibitor of an esterase activity of DJ-1 with an IC50 value of 0.02 µM. Thiram was also found as a good inhibitor of the protective activity of DJ-1 against glycation. Such inhibitory effects could be one of the various biological effects of these pesticides that may explain their involvement in the development of Parkinson's disease.


Asunto(s)
Enfermedades Neurodegenerativas , Enfermedad de Parkinson , Plaguicidas , Humanos , Enfermedad de Parkinson/patología , Plaguicidas/toxicidad , Proteína Desglicasa DJ-1/genética , Proteína Desglicasa DJ-1/metabolismo , Tiram
10.
Arch Biochem Biophys ; 508(1): 54-63, 2011 Apr 01.
Artículo en Inglés | MEDLINE | ID: mdl-21241658

RESUMEN

Fexofenadine, an antihistamine drug used in allergic rhinitis treatment, can be produced by oxidative biotransformation of terfenadine by Streptomyces platensis, which involves three consecutive oxidation reactions. We report here the purification and identification of the enzyme responsible for the first step, a cytochrome P450 (P450)-dependent monooxygenase. The corresponding P450, designated P450(terf), was found to catalyze the hydroxylation of the t-butyl group of terfenadine and exhibited UV-Vis characteristics of a P450. Its interaction with terfenadine led to a shift of its Soret peak from 418 to 390 nm, as expected for the formation of a P450-substrate complex. In combination with spinach ferredoxin:NADP(+) oxidoreductase and ferredoxin, and in the presence of NADPH, it catalyzed the hydroxylation of terfenadine and some of its analogues, such as terfenadone and ebastine, with k(m) values at the µM level, and k(cat) values around 30min(-1). Sequencing of the p450(terf) gene led to a 1206 bp sequence, encoding for a 402 aminoacid polypeptide exhibiting 56-65% identity with the P450s from the 107L family. These results confirmed that P450s from Streptomyces species are interesting tools for the biotechnological production of secondary metabolites, such as antibiotics or antitumor compounds, and in the oxidative biotransformation of xenobiotics, such as drugs.


Asunto(s)
Sistema Enzimático del Citocromo P-450/metabolismo , Streptomyces/metabolismo , Terfenadina/metabolismo , Secuencia de Aminoácidos , Sistema Enzimático del Citocromo P-450/química , Sistema Enzimático del Citocromo P-450/genética , Sistema Enzimático del Citocromo P-450/aislamiento & purificación , Hidroxilación , Espacio Intracelular/enzimología , Espacio Intracelular/metabolismo , Datos de Secuencia Molecular , Oxidación-Reducción , Análisis de Secuencia de ADN , Estereoisomerismo , Streptomyces/citología , Streptomyces/enzimología , Especificidad por Sustrato , Terfenadina/química , Xenobióticos/metabolismo
11.
FEBS J ; 275(15): 3793-803, 2008 Aug.
Artículo en Inglés | MEDLINE | ID: mdl-18557934

RESUMEN

Hepcidin is a liver produced cysteine-rich peptide hormone that acts as the central regulator of body iron metabolism. Hepcidin is synthesized under the form of a precursor, prohepcidin, which is processed to produce the biologically active mature 25 amino acid peptide. This peptide is secreted and acts by controlling the concentration of the membrane iron exporter ferroportin on intestinal enterocytes and macrophages. Hepcidin binds to ferroportin, inducing its internalization and degradation, thus regulating the export of iron from cells to plasma. The aim of the present study was to develop a novel method to produce human and mouse recombinant hepcidins, and to compare their biological activity towards their natural receptor ferroportin. Hepcidins were expressed in Escherichia coli as thioredoxin fusion proteins. The corresponding peptides, purified after cleavage from thioredoxin, were properly folded and contained the expected four-disulfide bridges without the need of any renaturation or oxidation steps. Human and mouse hepcidins were found to be biologically active, promoting ferroportin degradation in macrophages. Importantly, biologically inactive aggregated forms of hepcidin were observed depending on purification and storage conditions, but such forms were unrelated to disulfide bridge formation.


Asunto(s)
Péptidos Catiónicos Antimicrobianos/biosíntesis , Proteínas Reguladoras del Hierro/biosíntesis , Animales , Péptidos Catiónicos Antimicrobianos/aislamiento & purificación , Péptidos Catiónicos Antimicrobianos/fisiología , Secuencia de Bases , Cromatografía Líquida de Alta Presión , Cartilla de ADN , Electroforesis en Gel de Poliacrilamida , Hepcidinas , Humanos , Proteínas Reguladoras del Hierro/aislamiento & purificación , Proteínas Reguladoras del Hierro/fisiología , Espectrometría de Masas/métodos , Ratones , Proteínas Recombinantes/biosíntesis , Proteínas Recombinantes/aislamiento & purificación , Proteínas Recombinantes/metabolismo
12.
J Inorg Biochem ; 102(2): 242-50, 2008 Feb.
Artículo en Inglés | MEDLINE | ID: mdl-17961652

RESUMEN

The lymphoid enhancer-binding factor 1 (LEF-1) recognizes a double-stranded 9 base-pairs (bp) long motif in DNA which is significantly bent upon binding. This bend is centered at two destacked adenines whose geometry closely resembles that of two adjacent guanines crosslinked by the antitumor drug cisplatin. It has been proposed that cisplatin-GG crosslinks could hijack high mobility group (HMG) box containing transcription factors such as LEF-1. In order to examine such a possibility, we used electrophoretic mobility shift assays to determine the affinity of the HMG box of LEF-1 for a series of 25 oligonucleotides containing a central GG sequence, free or site-specifically modified by cisplatin. The binding affinity of the GG-platinated oligonucleotides was 3-6-fold higher than that determined for the corresponding unplatinated oligonucleotides, however, the binding to all cisplatin-modified oligonucleotides was at least 1 order of magnitude weaker than that to the 25 bp oligonucleotide containing the recognition 9 bp motif. The binding affinity was dependent on the nature of bases flanking the cisplatin-crosslinked G(*)G(*) dinucleotide, the AG(*)G(*)T sequence displaying the strongest affinity and CG(*)G(*)T showing the strongest binding enhancement upon platination. In contrast, modification of the AGGT sequence with the third-generation platinum antitumor drug oxaliplatin did not enhance the affinity significantly. These results suggest that the cisplatin-caused bending of DNA does produce a target for LEF-1 binding, however, the cisplatinated DNA does not appear to be a strong competitor for the LEF-1 recognition sequence.


Asunto(s)
Cisplatino/metabolismo , Aductos de ADN/metabolismo , ADN/metabolismo , Proteínas del Grupo de Alta Movilidad/metabolismo , Factor de Unión 1 al Potenciador Linfoide/metabolismo , Secuencia de Bases , ADN/química , Aductos de ADN/química , Proteínas de Unión al ADN/química , Proteínas de Unión al ADN/metabolismo , Guanina/metabolismo , Factor de Unión 1 al Potenciador Linfoide/química , Oligonucleótidos/metabolismo , Platino (Metal)/metabolismo
13.
Free Radic Res ; 41(4): 413-23, 2007 Apr.
Artículo en Inglés | MEDLINE | ID: mdl-17454123

RESUMEN

Serotonin, an important neurotransmitter, is colocalized with neuronal nitric oxide synthase (nNOS), a homodimeric enzyme which catalyzes the production of nitric oxide (NO(.-)) and/or oxygen species. As many interactions have been reported between the nitrergic and serotoninergic systems, we studied the effect of serotonin on nNOS activities. Our results reveal that nNOS is activated by serotonin as both NADPH consumption and oxyhemoglobin (OxyHb) oxidation were enhanced. The generation of L-citrulline from L-arginine (L-Arg) was not affected by serotonin in the range of 0-200 microM, suggesting an additional production of oxygen-derived species. But 5-hydroxytryptamine (5HT) induced the formation of both O and H(2)O(2) by nNOS, as evidenced by electron paramagnetic resonance (EPR) and by using specific spin traps. Overall, these results demonstrate that serotonin is able to activate nNOS, leading to the generation of reactive oxygen species (ROS) in addition to the NO(.-) production. Such a property must be considered in vivo as various nNOS-derived products mediate different signaling pathways.


Asunto(s)
Regulación Enzimológica de la Expresión Génica , Neurotransmisores/metabolismo , Óxido Nítrico Sintasa de Tipo I/metabolismo , Serotonina/fisiología , Animales , Encéfalo/metabolismo , Citrulina/química , Citrulina/metabolismo , Espectroscopía de Resonancia por Spin del Electrón , Peróxido de Hidrógeno/metabolismo , NADP/metabolismo , Óxido Nítrico Sintasa de Tipo III/metabolismo , Oxihemoglobinas/metabolismo , Ratas , Especies Reactivas de Oxígeno , Superóxidos/metabolismo
14.
J Inorg Biochem ; 101(4): 614-22, 2007 Apr.
Artículo en Inglés | MEDLINE | ID: mdl-17267045

RESUMEN

Comamonas testosteroni Ni1 nitrile hydratase is a Fe-type nitrile hydratase whose native and recombinant forms are identical. Here, the iron of Ni1 nitrile hydratase was replaced by cobalt using a chaperone based Escherichia coli expression system. Cobalt (CoNi1) and iron (FeNi1) enzymes share identical Vmax (30 nmol min(-1) mg(-1)) and Km (200 microM) toward their substrate and identical Ki values for the known competitive inhibitors of FeNi1. However, nitrophenols used as inhibitors do display a different inhibition pattern on both enzymes. Furthermore, CoNi1 and FeNi1 are also different in their sensitivity to nitric oxide and carbon monoxide, CO being selective of the cobalt enzyme. These differences are rationalized in relation to the nature of the catalytic metal center in the enzyme.


Asunto(s)
Monóxido de Carbono/farmacología , Cobalto/química , Hidroliasas/química , Hidroliasas/metabolismo , Hierro/química , Proteínas Bacterianas/química , Proteínas Bacterianas/genética , Proteínas Bacterianas/metabolismo , Sitios de Unión , Catálisis/efectos de los fármacos , Comamonas testosteroni/enzimología , Activación Enzimática/efectos de los fármacos , Escherichia coli/genética , Hidroliasas/genética , Estructura Molecular , Óxido Nítrico/farmacología , Proteínas Recombinantes/química , Proteínas Recombinantes/metabolismo , Relación Estructura-Actividad
15.
PLoS One ; 11(5): e0155444, 2016.
Artículo en Inglés | MEDLINE | ID: mdl-27171236

RESUMEN

Understanding the evolution of sex determination in plants requires the cloning and the characterization of sex determination genes. Monoecy is characterized by the presence of both male and female flowers on the same plant. Andromonoecy is characterized by plants carrying both male and bisexual flowers. In watermelon, the transition between these two sexual forms is controlled by the identity of the alleles at the A locus. We previously showed, in two Cucumis species, melon and cucumber, that the transition from monoecy to andromonoecy results from mutations in 1-aminocyclopropane-1-carboxylic acid synthase (ACS) gene, ACS-7/ACS2. To test whether the ACS-7/ACS2 function is conserved in cucurbits, we cloned and characterized ClACS7 in watermelon. We demonstrated co-segregation of ClACS7, the homolog of CmACS-7/CsACS2, with the A locus. Sequence analysis of ClACS7 in watermelon accessions identified three ClACS7 isoforms, two in andromonoecious and one in monoecious lines. To determine whether the andromonoecious phenotype is due to a loss of ACS enzymatic activity, we expressed and assayed the activity of the three protein isoforms. Like in melon and cucumber, the isoforms from the andromonoecious lines showed reduced to no enzymatic activity and the isoform from the monoecious line was active. Consistent with this, the mutations leading andromonoecy were clustered in the active site of the enzyme. Based on this, we concluded that active ClACS7 enzyme leads to the development of female flowers in monoecious lines, whereas a reduction of enzymatic activity yields hermaphrodite flowers. ClACS7, like CmACS-7/CsACS2 in melon and cucumber, is highly expressed in carpel primordia of buds determined to develop carpels and not in male flowers. Based on this finding and previous investigations, we concluded that the monoecy gene, ACS7, likely predated the separation of the Cucumis and Citrullus genera.


Asunto(s)
Evolución Biológica , Citrullus/genética , Citrullus/fisiología , Cucumis sativus/genética , Cucumis sativus/fisiología , Genes de Plantas , Alelos , Secuencia de Bases , Segregación Cromosómica/genética , Ecotipo , Flores/genética , Regulación de la Expresión Génica de las Plantas , Sitios Genéticos , Variación Genética , Cinética , Familia de Multigenes , Filogenia , Proteínas de Plantas/genética , Proteínas de Plantas/metabolismo , Isoformas de Proteínas/genética , Isoformas de Proteínas/metabolismo , Homología de Secuencia de Ácido Nucleico , Sintenía/genética
16.
Science ; 350(6261): 688-91, 2015 Nov 06.
Artículo en Inglés | MEDLINE | ID: mdl-26542573

RESUMEN

Understanding the evolution of sex determination in plants requires identifying the mechanisms underlying the transition from monoecious plants, where male and female flowers coexist, to unisexual individuals found in dioecious species. We show that in melon and cucumber, the androecy gene controls female flower development and encodes a limiting enzyme of ethylene biosynthesis, ACS11. ACS11 is expressed in phloem cells connected to flowers programmed to become female, and ACS11 loss-of-function mutants lead to male plants (androecy). CmACS11 represses the expression of the male promoting gene CmWIP1 to control the development and the coexistence of male and female flowers in monoecious species. Because monoecy can lead to dioecy, we show how a combination of alleles of CmACS11 and CmWIP1 can create artificial dioecy.


Asunto(s)
Evolución Biológica , Cucurbitaceae/crecimiento & desarrollo , Flores/crecimiento & desarrollo , Liasas/fisiología , Proteínas de Plantas/fisiología , Procesos de Determinación del Sexo/genética , Alelos , Secuencia de Aminoácidos , Cucumis sativus/enzimología , Cucumis sativus/genética , Cucumis sativus/crecimiento & desarrollo , Cucurbitaceae/enzimología , Cucurbitaceae/genética , Etilenos/biosíntesis , Flores/enzimología , Flores/genética , Genes de Plantas/genética , Genes de Plantas/fisiología , Liasas/genética , Datos de Secuencia Molecular , Floema/enzimología , Floema/genética , Floema/crecimiento & desarrollo , Proteínas de Plantas/genética
17.
J Med Chem ; 45(4): 944-54, 2002 Feb 14.
Artículo en Inglés | MEDLINE | ID: mdl-11831907

RESUMEN

The formation of nitric oxide (NO) was followed during the oxidation of 37 N-hydroxyguanidines or related derivatives, including 18 new N-aryl N'-hydroxyguanidines, by recombinant inducible nitric oxide synthase (NOS II). Several N-aryl N'-hydroxyguanidines bearing a relatively small, electron-donating para subtituent, such as H, F, Cl, CH(3), OH, OCH(3), and NH(2), led to NO formation rates between 8 and 41% of that of NO formation from the natural NOS substrate, N(omega)-hydroxy-L-arginine (NOHA). The characteristics of these reactions were very similar to those previously reported for the oxidation of NOHA by NOS:(i) the strict requirement of NOS containing (6R)-5,6,7,8-tetrahydro-L-biopterin, reduced nicotinamide adenine dinucleotide phosphate, and O(2) for the oxidation to occur, (ii) the formation of NO and the corresponding urea in a 1:1 molar ratio, and (iii) a strong inhibitory effect of the classical NOS inhibitors such as N(omega)-nitro-L-arginine and S-ethyl-iso-thiourea. Structure-activity relationship studies showed that two structural factors are crucial for NO formation from compounds containing a C(triple bond)NOH function. The first one is the presence of a monosubstituted N-hydroxyguanidine function, since disubstituted N-hydroxyguanidines, amidoximes, ketoximes, and aldoximes failed to produce NO. The second one is the presence of a N-phenyl ring bearing a relatively small, not electron-withdrawing para substituent that could favorably interact with a hydrophobic cavity close to the NOS catalytic site. The k(cat) value for NOS II-catalyzed oxidation of N-para-fluorophenyl N'-hydroxyguanidine was 80% of that found for NOHA, and its k(cat)/K(m) value was only 9-fold lower than that of NOHA. Interestingly, the K(m) value found for NOS II-catalyzed oxidation of N-(3-thienyl) N'-hydroxyguanidine was 25 microM, almost identical to that of NOHA. Recombinant NOS I and NOS III also oxidize several N-aryl N'-hydroxyguanidines with the formation of NO, with a clearly different substrate specificity. The best substrates of the studied series for NOS I and NOS III were N-(para-hydroxyphenyl) and N-(meta-aminophenyl) N'-hydroxyguanidine, respectively. Among the studied compounds, the para-chlorophenyl and para-methylphenyl derivatives were selective substrates of NOS II. These results open the way toward a new class of selective NO donors after in situ oxidation by each NOS family.


Asunto(s)
Guanidinas/síntesis química , Donantes de Óxido Nítrico/síntesis química , Óxido Nítrico Sintasa/química , Catálisis , Cromatografía Líquida de Alta Presión , Guanidinas/química , Cinética , NADP/química , Donantes de Óxido Nítrico/química , Óxido Nítrico Sintasa de Tipo I , Óxido Nítrico Sintasa de Tipo II , Óxido Nítrico Sintasa de Tipo III , Oxidación-Reducción , Oxígeno/química , Oxihemoglobinas/química , Relación Estructura-Actividad
18.
J Mass Spectrom ; 38(9): 955-61, 2003 Sep.
Artículo en Inglés | MEDLINE | ID: mdl-14505323

RESUMEN

Nitrile hydratases (NHases) are industrially significant iron- and cobalt-containing enzymes used in the large-scale synthesis of acrylamide. Previous reports have shown that the active site peptides of NHases are post-translationally modified by oxidation of cysteine residues, and that these modifications are essential for catalysis. We report mass spectrometric evidence of the oxidation states of the active site cysteines in the iron coordination spheres of two iron-containing nitrile hydratases, namely R312 NHase from Rhodococcus rhodochrous strain R312 and NI1 NHase from Comamonas testosteroni. At least one of these cysteines is oxidised to a sulfinic acid (SO(2)H) and there is also evidence suggesting an additional oxidation to a sulfenic acid (SOH). This is the first evidence for the presence of these oxidation states for full-length NHases and for Fe-NHases from different microorganisms. The presence of these covalent modifications was confirmed by performing mass spectrometry on the active site peptide of R312 NHase, under native, reduced and carboxymethylated conditions. We also show the nitrosylation of the iron by mass spectrometry, as well as the release of NO by photoirradiation.


Asunto(s)
Comamonas/enzimología , Hidroliasas/química , Hidroliasas/metabolismo , Procesamiento Proteico-Postraduccional , Rhodococcus/enzimología , Sitios de Unión , Activación Enzimática , Hidroliasas/aislamiento & purificación , Modelos Químicos , Estructura Molecular , Espectrometría de Masa por Ionización de Electrospray
19.
J Inorg Biochem ; 98(7): 1200-9, 2004 Jul.
Artículo en Inglés | MEDLINE | ID: mdl-15219986

RESUMEN

Nitric oxide (NO) is synthesised by a two-step oxidation of -arginine (L-Arg) in the active site of nitric oxide synthase (NOS) with formation of an intermediate, N omega-hydroxy-L-Arg (NOHA). Crystal structures of NOSs have shown the importance of an active-site Val567 residue (numbered for rat neuronal NOS, nNOS) interacting with non-amino acid substrates. To investigate the role of this Val residue in substrate recognition and NO-formation activity by nNOS, we generated and purified four Val567 mutants of nNOS, Val567Leu, Val567Phe, Val567Arg and Val567Glu. We characterized these proteins and tested their ability to generate NO from the oxidation of natural substrates L-Arg and NOHA, and from N-hydroxyguanidines previously identified as alternative substrates for nNOS. The Val567Leu mutant displayed lower NO formation activities than the wild type (WT) in the presence of all tested compounds. Surprisingly, the Val567Phe mutant formed low amounts of NO only from NOHA. These two mutants displayed lower affinity for L-Arg and NOHA than the WT protein. Val576Glu and Val567Arg mutants were much less stable and did not lead to any formation of NO. These results suggest that Val567 is an important residue for preserving the integrity of the active site, for substrate binding, and subsequently for NO-formation in nNOS.


Asunto(s)
Sustitución de Aminoácidos/genética , Proteínas del Tejido Nervioso/química , Óxido Nítrico Sintasa/química , Mutación Puntual/genética , Valina/química , Animales , Arginina/química , Sitios de Unión/genética , Proteínas del Tejido Nervioso/genética , Óxido Nítrico/química , Óxido Nítrico Sintasa/genética , Óxido Nítrico Sintasa de Tipo I , Estructura Terciaria de Proteína , Ratas , Especificidad por Sustrato/genética , Valina/genética
20.
Acta Biochim Pol ; 60(2): 217-22, 2013.
Artículo en Inglés | MEDLINE | ID: mdl-23748219

RESUMEN

We examined the kinetics of single-electron reduction of a large number of structurally diverse quinones and nitroaromatic compounds, including a number of antitumour and antiparasitic drugs, and nitroaromatic explosives by recombinant rat neuronal nitric oxide synthase (nNOS, EC 1.14.13.39), aiming to characterize the role of nNOS in the oxidative stress-type cytotoxicity of the above compounds. The steady-state second-order rate constants (kcat/Km) of reduction of the quinones and nitroaromatics varied from 10² M⁻¹s⁻¹ to 106 M⁻¹s⁻¹, and increased with an increase in their single-electron reduction potentials (E¹7). The presence of Ca²âº/calmodulin enhanced the reactivity of nNOS. These reactions were consistent with an 'outer sphere' electron-transfer mechanism, considering the FMNH∙/FMNH2 couple of nNOS as the most reactive reduced enzyme form. An analysis of the reactions of nNOS within the 'outer sphere' electron-transfer mechanism gave the approximate values of the distance of electron transfer, 0.39-0.47 nm, which are consistent with the crystal structure of the reductase domain of nNOS. On the other hand, at low oxygen concentrations ([O2] = 40-50 µM), nNOS performs a net two-electron reduction of quinones and nitroaromatics. This implies that NOS may in part be responsible for the bioreductive alkylation by two-electron reduced forms of antitumour aziridinyl-substituted quinones under a modest hypoxia.


Asunto(s)
Aziridinas/metabolismo , Óxido Nítrico Sintasa de Tipo I/metabolismo , Quinonas/metabolismo , Xenobióticos/metabolismo , Animales , Benzoquinonas/metabolismo , Calcio/metabolismo , Calmodulina/metabolismo , Transporte de Electrón , Cinética , Nitrocompuestos/metabolismo , Oxidación-Reducción , Relación Estructura-Actividad Cuantitativa , Ratas , Proteínas Recombinantes/metabolismo
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