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1.
Epidemiol Infect ; 149: e44, 2021 02 10.
Artículo en Inglés | MEDLINE | ID: mdl-33563349

RESUMEN

Much of our current understanding about novel coronavirus disease 2019 (COVID-19) comes from hospitalised patients. However, the spectrum of mild and subclinical disease has implications for population-level screening and control. Forty-nine participants were recruited from a group of 99 adults repatriated from a cruise ship with a high incidence of COVID-19. Respiratory and rectal swabs were tested by polymerase chain reaction (PCR) for severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2). Sera were tested for anti-SARS-CoV-2 antibodies by enzyme-linked immunosorbent assay (ELISA) and microneutralisation assay. Symptoms, viral shedding and antibody response were examined. Forty-five participants (92%) were considered cases based on either positive PCR or positive ELISA for immunoglobulin G. Forty-two percent of cases were asymptomatic. Only 15% of symptomatic cases reported fever. Serial respiratory and rectal swabs were positive for 10% and 5% of participants respectively about 3 weeks after median symptom onset. Cycle threshold values were high (range 31-45). Attempts to isolate live virus were unsuccessful. The presence of symptoms was not associated with demographics, comorbidities or antibody response. In closed settings, incidence of COVID-19 could be almost double that suggested by symptom-based screening. Serology may be useful in diagnosis of mild disease and in aiding public health investigations.


Asunto(s)
Anticuerpos Antivirales/sangre , COVID-19/epidemiología , COVID-19/virología , Navíos , Evaluación de Síntomas , Esparcimiento de Virus , Adulto , Anciano , Anciano de 80 o más Años , Estudios de Cohortes , Ensayo de Inmunoadsorción Enzimática , Femenino , Humanos , Incidencia , Masculino , Persona de Mediana Edad , Pruebas de Neutralización , SARS-CoV-2/fisiología , Turismo , Uruguay , Victoria/epidemiología
2.
Phytopathology ; 107(1): 50-58, 2017 Jan.
Artículo en Inglés | MEDLINE | ID: mdl-27482627

RESUMEN

Downy mildew is the most devastating disease threatening sustainable spinach production, particularly in the organic sector. The disease is caused by the biotrophic oomycete pathogen Peronospora effusa, and the disease results in yellow lesions that render the crop unmarketable. In this study, the levels of DNA from airborne spores of P. effusa were assessed near a field of susceptible plants in Salinas, CA during the winter months of 2013-14 and 2014/15 using rotating-arm impaction spore-trap samplers that were assessed with a species-specific quantitative polymerase chain reaction (qPCR) assay. Low levels of P. effusa DNA were detectable from December through February in both winters but increased during January in both years, in correlation with observed disease incidence; sharp peaks in P. effusa DNA detection were associated with the onset of disease incidence. The incidence of downy mildew in the susceptible field displayed logistic-like dynamics but with considerable interseason variation. Analysis of the area under the disease progress curves suggested that the 2013-14 epidemic was significantly more severe than the 2014-15 epidemic. Spatial analyses indicated that disease incidence was dependent within an average range of 5.6 m, approximately equivalent to the width of three planted beds in a typical production field. The spatial distribution of spores captured during an active epidemic most closely fit a power-law distribution but could also be fit with an exponential distribution. These studies revealed two important results in the epidemiology of spinach downy mildew in California. First, they demonstrated the potential of impaction spore-trap samplers linked with a qPCR assay for indicating periods of high disease risk, as well as the detection of long-distance dispersal of P. effusa spores. Second, at the scale of individual crops, a high degree of spatial aggregation in disease incidence was revealed.


Asunto(s)
Microbiología del Aire , Peronospora/aislamiento & purificación , Enfermedades de las Plantas/microbiología , Spinacia oleracea/microbiología , California , Peronospora/genética , Peronospora/fisiología , Enfermedades de las Plantas/estadística & datos numéricos , Análisis Espacio-Temporal , Especificidad de la Especie , Esporas
3.
Phytopathology ; 106(3): 216-25, 2016 Mar.
Artículo en Inglés | MEDLINE | ID: mdl-26574784

RESUMEN

Biological suppression of soilborne diseases with minimal use of outside interventive actions has been difficult to achieve in high input conventional crop production systems due to the inherent risk of pest resurgence. This review examines previous approaches to the management of soilborne disease as precursors to the evolution of a systems-based approach, in which plant disease suppression through natural biological feedback mechanisms in soil is incorporated into the design and operation of cropping systems. Two case studies are provided as examples in which a systems-based approach is being developed and deployed in the production of high value crops: lettuce/strawberry production in the coastal valleys of central California (United States) and sweet basil and other herb crop production in Israel. Considerations for developing and deploying system-based approaches are discussed and operational frameworks and metrics to guide their development are presented with the goal of offering a credible alternative to conventional approaches to soilborne disease management.


Asunto(s)
Agricultura/métodos , Técnicas de Apoyo para la Decisión , Enfermedades de las Plantas/prevención & control , Microbiología del Suelo , Control Biológico de Vectores/métodos , Plaguicidas/farmacología
4.
Phytopathology ; 106(11): 1311-1318, 2016 11.
Artículo en Inglés | MEDLINE | ID: mdl-27442537

RESUMEN

Peronospora effusa is an obligate oomycete that causes downy mildew of spinach. Downy mildew threatens sustainable production of fresh market organic spinach in California, and routine fungicide sprays are often necessary for conventional production. In this study, airborne P. effusa spores were collected using rotating arm impaction spore trap samplers at four sites in the Salinas Valley between late January and early June in 2013 and 2014. Levels of P. effusa DNA were determined by a species-specific quantitative polymerase chain reaction assay. Peronospora effusa was detected prior to and during the growing season in both years. Nonlinear time series analyses on the data suggested that the within-season dynamics of P. effusa airborne inoculum are characterized by a mixture of chaotic, deterministic, and stochastic features, with successive data points somewhat predictable from the previous values in the series. Analyses of concentrations of airborne P. effusa suggest both an exponential increase in concentration over the course of the season and oscillations around the increasing average value that had season-specific periodicity around 30, 45, and 75 days, values that are close to whole multiples of the combined pathogen latent and infectious periods. Each unit increase in temperature was correlated with 1.7 to 6% increased odds of an increase in DNA copy numbers, while each unit decrease in wind speed was correlated with 4 to 12.7% increased odds of an increase in DNA copy numbers. Disease incidence was correlated with airborne P. effusa levels and weather variables, and a receiver operating characteristic curve analysis suggested that P. effusa DNA copy numbers determined from the spore traps nine days prior to disease rating could predict disease incidence.


Asunto(s)
Peronospora/aislamiento & purificación , Enfermedades de las Plantas/parasitología , Spinacia oleracea/parasitología , California , Variaciones en el Número de Copia de ADN , ADN Ribosómico/genética , Incidencia , Peronospora/genética , Peronospora/fisiología , Estaciones del Año , Especificidad de la Especie , Esporas , Tiempo (Meteorología)
5.
Phytopathology ; 105(1): 80-90, 2015 Jan.
Artículo en Inglés | MEDLINE | ID: mdl-25098494

RESUMEN

Verticillium wilt caused by V. dahliae is a devastating disease of lettuce in California (CA). The disease is currently restricted to a small geographic area in central coastal CA, even though cropping patterns in other coastal lettuce production regions in the state are similar. Infested spinach seed has been implicated in the introduction of V. dahliae into lettuce fields but direct evidence linking this inoculum to wilt epidemics in lettuce is lacking. In this study, 100 commercial spinach fields in four coastal CA counties were surveyed to evaluate the frequency of Verticillium species recovered from spinach seedlings and the area under spinach production in each county was assessed. Regardless of the county, V. isaacii was the most frequently isolated species from spinach followed by V. dahliae and, less frequently, V. klebahnii. The frequency of recovery of Verticillium species was unrelated to the occurrence of Verticillium wilt on lettuce in the four counties but was related to the area under spinach production in individual counties. The transmission of V. dahliae from infested spinach seeds to lettuce was investigated in microplots. Verticillium wilt developed on lettuce following two or three plantings of Verticillium-infested spinach, in independent experiments. The pathogen recovered from the infected lettuce from microplots was confirmed as V. dahliae by polymerase chain reaction assays. In a greenhouse study, transmission of a green fluorescence protein-tagged mutant strain of V. dahliae from spinach to lettuce roots was demonstrated, after two cycles of incorporation of infected spinach residue into the soil. This study presents conclusive evidence that V. dahliae introduced via spinach seed can cause Verticillium wilt in lettuce.


Asunto(s)
Lactuca/microbiología , Enfermedades de las Plantas/microbiología , Spinacia oleracea/microbiología , Verticillium/fisiología , California , Productos Agrícolas , ADN de Hongos/genética , Genes Reporteros , Geografía , Lactuca/citología , Raíces de Plantas/microbiología , Semillas/microbiología , Suelo , Microbiología del Suelo , Spinacia oleracea/citología , Verticillium/genética , Verticillium/aislamiento & purificación
6.
Phytopathology ; 104(9): 908-17, 2014 Sep.
Artículo en Inglés | MEDLINE | ID: mdl-24624952

RESUMEN

Verticillium wilt, caused by Verticillium dahliae, is a destructive disease in lettuce, and the pathogen is seedborne. Even though maximum seed infestation rates of <5% have been detected in commercial lettuce seed lots, it is necessary to establish acceptable contamination thresholds to prevent introduction and establishment of the pathogen in lettuce production fields. However, introduction of inoculum into lettuce fields for experimental purposes to determine its long term effects is undesirable. Therefore, we constructed a simulation model to study the spread of Verticillium wilt following pathogen introduction from seed. The model consists of four components: the first for simulating infection of host plants, the second for simulating reproduction of microsclerotia on diseased plants, the third for simulating the survival of microsclerotia, and the fourth for simulating the dispersal of microsclerotia. The simulation results demonstrated that the inoculum density-disease incidence curve parameters and the dispersal gradients affect disease spread in the field. Although a steep dispersal gradient facilitated the establishment of the disease in a new field with a low inoculum density, a long-tail gradient allowed microsclerotia to be dispersed over greater distances, promoting the disease spread in fields with high inoculum density. The simulation results also revealed the importance of avoiding successive lettuce crops in the same field, reducing survival rate of microsclerotia between crops, and the need for breeding resistance against V. dahliae in lettuce cultivars to lower the number of microsclerotia formed on each diseased plant. The simulation results, however, suggested that, even with a low seed infestation rate, the pathogen would eventually become established if susceptible lettuce cultivars were grown consecutively in the same field for many years. A threshold for seed infestation can be established only when two of the three drivers of the disease-(i) low microsclerotia production per diseased plant, (ii) long-tail dispersal gradient, and (iii) low microsclerotia survival between lettuce crops-are present.


Asunto(s)
Lactuca/microbiología , Enfermedades de las Plantas/prevención & control , Verticillium/fisiología , Simulación por Computador , Modelos Teóricos , Enfermedades de las Plantas/microbiología , Enfermedades de las Plantas/estadística & datos numéricos , Riesgo , Semillas/microbiología , Verticillium/crecimiento & desarrollo
7.
Phytopathology ; 104(6): 641-9, 2014 Jun.
Artículo en Inglés | MEDLINE | ID: mdl-24476528

RESUMEN

Few studies in population biology have documented how structure and diversity of pathogens evolve over time at local scales. With the historical samples of Verticillium dahliae available from lettuce, we investigated the structure and diversity of this pathogen in time and space. Three hundred twenty-nine V. dahliae isolates from lettuce fields collected over 18 years were characterized with polymorphic microsatellite markers and polymerase chain reaction tests for race and mating type. Genetic variation within and among commercial lettuce fields in a single season was also investigated using an additional 146 isolates. Sixty-two haplotypes (HTs) were observed among the 329 isolates. A single HT was frequently observed over multiple years and locations (61.40%). Genetic diversity, allelic richness, and private allelic richness suggested a relatively recent clonal expansion. Race 1 (93.63%) and MAT1-2-1 (99.69%) were overwhelmingly represented among the isolates. Linkage disequilibrium was significant (P < 0.001) for all populations, suggesting limited sexual recombination in the sampled populations from lettuce. Populations from 2006, 2009, and 2010 had higher numbers of unique HTs, implying a recent introduction of novel HTs. We conclude that V. dahliae population from lettuce evaluated in this study is expanding clonally, consistent with an asexually reproducing pathogen, and the movement of clonal genotypes locally occurs over time.


Asunto(s)
Variación Genética , Lactuca/microbiología , Enfermedades de las Plantas/microbiología , Verticillium/genética , Alelos , Cartilla de ADN/genética , ADN de Hongos/genética , Demografía , Genes del Tipo Sexual de los Hongos/genética , Genética de Población , Genotipo , Haplotipos , Desequilibrio de Ligamiento , Repeticiones de Microsatélite/genética , Especificidad de la Especie , Verticillium/aislamiento & purificación
8.
Phytopathology ; 104(3): 282-92, 2014 Mar.
Artículo en Inglés | MEDLINE | ID: mdl-24134719

RESUMEN

Verticillium wilt, caused by Verticillium nonalfalfae, is currently killing tens of thousands of highly invasive Ailanthus altissima trees within the forests in Pennsylvania, Ohio, and Virginia and is being considered as a biological control agent of Ailanthus. However, little is known about the pathogenicity and virulence of V. nonalfalfae isolates from other hosts on Ailanthus, or the genetic diversity among V. nonalfalfae from confirmed Ailanthus wilt epicenters and from locations and hosts not associated with Ailanthus wilt. Here, we compared the pathogenicity and virulence of several V. nonalfalfae and V. alfalfae isolates, evaluated the efficacy of the virulent V. nonalfalfae isolate VnAa140 as a biocontrol agent of Ailanthus in Pennsylvania, and performed multilocus sequence typing of V. nonalfalfae and V. alfalfae. Inoculations of seven V. nonalfalfae and V. alfalfae isolates from six plant hosts on healthy Ailanthus seedlings revealed that V. nonalfalfae isolates from hosts other than Ailanthus were not pathogenic on Ailanthus. In the field, 100 canopy Ailanthus trees were inoculated across 12 stands with VnAa140 from 2006 to 2009. By 2011, natural spread of the fungus had resulted in the mortality of >14,000 additional canopy Ailanthus trees, 10,000 to 15,000 Ailanthus sprouts, and nearly complete eradication of Ailanthus from several smaller inoculated stands, with the exception of a few scattered vegetative sprouts that persisted in the understory for several years before succumbing. All V. nonalfalfae isolates associated with the lethal wilt of Ailanthus, along with 18 additional isolates from 10 hosts, shared the same multilocus sequence type (MLST), MLST 1, whereas three V. nonalfalfae isolates from kiwifruit shared a second sequence type, MLST 2. All V. alfalfae isolates included in the study shared the same MLST and included the first example of V. alfalfae infecting a non-lucerne host. Our results indicate that V. nonalfalfae is host adapted and highly efficacious against Ailanthus and, thus, is a strong candidate for use as a biocontrol agent.


Asunto(s)
Ailanthus/microbiología , Variación Genética , Enfermedades de las Plantas/microbiología , Verticillium/patogenicidad , Ailanthus/crecimiento & desarrollo , Secuencia de Bases , Agentes de Control Biológico , Especies Introducidas , Datos de Secuencia Molecular , Tipificación de Secuencias Multilocus , Técnicas de Tipificación Micológica , Pennsylvania , Filogenia , Raíces de Plantas/crecimiento & desarrollo , Raíces de Plantas/microbiología , Tallos de la Planta/crecimiento & desarrollo , Tallos de la Planta/microbiología , Árboles , Verticillium/genética , Verticillium/aislamiento & purificación , Verticillium/fisiología
9.
Plant Dis ; 98(2): 206-212, 2014 Feb.
Artículo en Inglés | MEDLINE | ID: mdl-30708763

RESUMEN

Spatial patterns of lettuce big-vein (LBV) incidence under furrow, sprinkler, and subsurface drip irrigation systems were determined. Because LBV pathogen is a virus and is vectored by the soilborne chytrid Olpidium brassicae, different irrigation systems likely affect the movement of the vector and were hypothesized to result in different distribution patterns and levels of the disease. Lettuce plants were mapped by recording the location of each LBV-infected or healthy plant in arbitrarily selected plots of sizes 16 by 30, 20 by 30, and 18 by 50 m in Salinas, Gonzales, and Santa Maria in California. Data were arrayed into different quadrat sizes by rearrangement, and disease incidence was calculated for each quadrat. Frequency distribution analysis and spatial autocorrelation analyses were performed on this data. LBV incidence was aggregated in all furrow-irrigated fields, four of five subsurface drip-irrigated fields, and two of three sprinkler-irrigated fields. The remaining fields had a random distribution. As the quadrat size increased, index of aggregation decreased, and vice versa. In fields under sprinkler irrigation, regardless of whether the spatial pattern of LBV was random or aggregated, no directional orientation occurred. However, under furrow or subsurface drip irrigation, the aggregation mostly occurred across the rows. Although irrigation type influenced LBV distribution pattern and incidence in lettuce fields, the differential effects of irrigation type on vector O. brassicae could not be discerned in this study. The sprinkler irrigation practiced in lettuce production until thinning may influence the vector distribution and the subsequent irrigation methods adapted for the remainder of the season in individual fields may play a significant role in disease incidence.

10.
J Virol Methods ; 327: 114944, 2024 Jun.
Artículo en Inglés | MEDLINE | ID: mdl-38649069

RESUMEN

Heparin is postulated to block the interaction of SARS-CoV-2 with highly glycosylated proteins which are critical for binding the angiotensin-converting enzyme 2 (ACE2), an essential mechanism for host-cell entry and viral replication. Intranasal heparin is under investigation for use as a SARS-CoV-2 preventative in the IntraNasal Heparin Trial (INHERIT, NCT05204550). Heparin directly interferes with real-time quantitative polymerase chain reaction (RT-qPCR), the gold standard for SARS-CoV-2 detection. This study aimed to investigate the magnitude of heparin interference across various clinical laboratory testing platforms, and the reversal of any interference by degradation of heparin using the heparinase I enzyme in nasopharyngeal swab (NP) samples for SARS-CoV-2 analysis by RT-qPCR. Heparin-mediated PCR interference was evident at heparin concentrations as low as 10 IU/mL across all platforms tested, with the exclusion of the Hologic Panther Aptima SARS-CoV-2 assay. Rates of false negative or invalid results increased with increasing heparin concentrations on all platforms, except the Hologic Panther Aptima and Roche Cobas LIAT. Heparinase I reversed heparin-mediated PCR inhibition across in all samples tested, except those with initial Ct values >35. Our study shows that the use of heparin-containing nasal sprays interferes with the detection of SARS-CoV-2 in NP swab samples by RT-qPCR, a phenomenon that is not well recognised in the literature. Furthermore, this study has also demonstrated that heparin-mediated PCR inhibition can be prevented through heparinase I treatment, demonstrating restoration of clinically significant results with Ct values <35.


Asunto(s)
COVID-19 , Liasa de Heparina , Heparina , SARS-CoV-2 , Liasa de Heparina/metabolismo , Humanos , SARS-CoV-2/genética , SARS-CoV-2/efectos de los fármacos , SARS-CoV-2/aislamiento & purificación , COVID-19/diagnóstico , COVID-19/virología , Reacción en Cadena en Tiempo Real de la Polimerasa/métodos , Prueba de Ácido Nucleico para COVID-19/métodos , Nasofaringe/virología , Reacciones Falso Negativas
11.
J Infect ; 89(6): 106286, 2024 Sep 26.
Artículo en Inglés | MEDLINE | ID: mdl-39341401

RESUMEN

OBJECTIVES: PICOBOO is a randomised, adaptive trial evaluating the immunogenicity, reactogenicity, and safety of COVID-19 booster strategies. We report data for second boosters among individuals 50-<70 years old primed with AZD1222 (50-<70y-AZD1222) until Day 84. METHODS: Immunocompetent adults who received any first booster ≥three months prior were eligible. Participants were randomly allocated to BNT162b2, mRNA-1273 or NVX-CoV2373 1:1:1. The concentrations of ancestral anti-spike immunoglobulin were summarised as the geometric mean concentrations (GMC). Reactogenicity and safety outcomes were captured. Additional analyses including neutralising antibodies were performed on a subset. ACTRN12622000238774. RESULTS: Between Mar 2022 and Aug 2023, 743 participants were recruited and had D28 samples; 155 belonged to the 50-<70y-AZD1222 stratum. The mean adjusted GMCs (95% credible intervals) were 20,690 (17 555-23 883), 23,867 (20 144-27 604) and 8654 (7267-9962) U/mL at D28 following boosting with BNT162b2, mRNA-1273 and NVX-CoV2372, respectively, and 10,976 (8826-13 196), 15,779 (12 512-19 070) and 6559 (5220-7937) U/mL by D84. IgG against Omicron BA.5 was 2.7-2.9 times lower than the ancestral strain. Limited neutralisation against Omicron subvariants was found following all vaccines. Severe reactogenicity events were <4%. CONCLUSIONS: All vaccines were immunogenic with more rapid waning after mRNA vaccines. These data support boosting with vaccines with greater specificity for circulating Omicron subvariants.

12.
J Hosp Infect ; 136: 110-117, 2023 Jun.
Artículo en Inglés | MEDLINE | ID: mdl-37105259

RESUMEN

BACKGROUND: Healthcare workers treating SARS-CoV-2 patients are at risk of infection by respiratory exposure to patient-emitted, virus-laden aerosols. Source control devices such as ventilated patient isolation hoods have been shown to limit the dissemination of non-infectious airborne particles in laboratory tests, but data on their performance in mitigating the airborne transmission risk of infectious viruses are lacking. AIM: We used an infectious airborne virus to quantify the ability of a ventilated hood to reduce infectious virus exposure in indoor environments. METHODS: We nebulized 109 plaque forming units (pfu) of bacteriophage PhiX174 virus into a ∼30-m3 room when the hood was active or inactive. The airborne concentration of infectious virus was measured by BioSpot-VIVAS and settle plates using plaque assay quantification on the bacterial host Escherichia coli C. The airborne particle number concentration (PNC) was also monitored continuously using an optical particle sizer. FINDINGS: The median airborne viral concentration in the room reached 1.41 × 105 pfu/m3 with the hood inactive. When active, the hood reduced infectious virus concentration in air samples by 374-fold. The deposition of infectious virus on the surface of settle plates was reduced by 87-fold. This was associated with a 109-fold reduction in total airborne particle number escape rate. CONCLUSION: A personal ventilation hood significantly reduced airborne particle escape, considerably lowering infectious virus contamination in an indoor environment. Our findings support the further development of source control devices to mitigate nosocomial infection risk among healthcare workers exposed to airborne viruses in clinical settings.


Asunto(s)
COVID-19 , SARS-CoV-2 , Humanos , COVID-19/prevención & control , Carga Viral , Respiración Artificial , Aerosoles y Gotitas Respiratorias
13.
Nat Cell Biol ; 25(8): 1223-1234, 2023 08.
Artículo en Inglés | MEDLINE | ID: mdl-37443288

RESUMEN

SARS-CoV-2 infection causes COVID-19. Several clinical reports have linked COVID-19 during pregnancy to negative birth outcomes and placentitis. However, the pathophysiological mechanisms underpinning SARS-CoV-2 infection during placentation and early pregnancy are not clear. Here, to shed light on this, we used induced trophoblast stem cells to generate an in vitro early placenta infection model. We identified that syncytiotrophoblasts could be infected through angiotensin-converting enzyme 2 (ACE2). Using a co-culture model of vertical transmission, we confirmed the ability of the virus to infect syncytiotrophoblasts through a previous endometrial cell infection. We further demonstrated transcriptional changes in infected syncytiotrophoblasts that led to impairment of cellular processes, reduced secretion of HCG hormone and morphological changes vital for syncytiotrophoblast function. Furthermore, different antibody strategies and antiviral drugs restore these impairments. In summary, we have established a scalable and tractable platform to study early placental cell types and highlighted its use in studying strategies to protect the placenta.


Asunto(s)
COVID-19 , Embarazo , Femenino , Humanos , COVID-19/metabolismo , Placenta/metabolismo , Trofoblastos , Enzima Convertidora de Angiotensina 2/metabolismo , SARS-CoV-2 , Diferenciación Celular
14.
Trials ; 24(1): 202, 2023 Mar 18.
Artículo en Inglés | MEDLINE | ID: mdl-36934272

RESUMEN

BACKGROUND: The need for coronavirus 2019 (COVID-19) vaccination in different age groups and populations is a subject of great uncertainty and an ongoing global debate. Critical knowledge gaps regarding COVID-19 vaccination include the duration of protection offered by different priming and booster vaccination regimens in different populations, including homologous or heterologous schedules; how vaccination impacts key elements of the immune system; how this is modified by prior or subsequent exposure to severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) and future variants; and how immune responses correlate with protection against infection and disease, including antibodies and effector and T cell central memory. METHODS: The Platform Trial In COVID-19 priming and BOOsting (PICOBOO) is a multi-site, multi-arm, Bayesian, adaptive, randomised controlled platform trial. PICOBOO will expeditiously generate and translate high-quality evidence of the immunogenicity, reactogenicity and cross-protection of different COVID-19 priming and booster vaccination strategies against SARS-CoV-2 and its variants/subvariants, specific to the Australian context. While the platform is designed to be vaccine agnostic, participants will be randomised to one of three vaccines at trial commencement, including Pfizer's Comirnaty, Moderna's Spikevax or Novavax's Nuvaxovid COVID-19 vaccine. The protocol structure specifying PICOBOO is modular and hierarchical. Here, we describe the Core Protocol, which outlines the trial processes applicable to all study participants included in the platform trial. DISCUSSION: PICOBOO is the first adaptive platform trial evaluating different COVID-19 priming and booster vaccination strategies in Australia, and one of the few established internationally, that is designed to generate high-quality evidence to inform immunisation practice and policy. The modular, hierarchical protocol structure is intended to standardise outcomes, endpoints, data collection and other study processes for nested substudies included in the trial platform and to minimise duplication. It is anticipated that this flexible trial structure will enable investigators to respond with agility to new research questions as they arise, such as the utility of new vaccines (such as bivalent, or SARS-CoV-2 variant-specific vaccines) as they become available for use. TRIAL REGISTRATION: Australian and New Zealand Clinical Trials Registry ACTRN12622000238774. Registered on 10 February 2022.


Asunto(s)
COVID-19 , Vacunas , Humanos , SARS-CoV-2 , COVID-19/prevención & control , Vacunas contra la COVID-19 , Teorema de Bayes , Australia , Vacunación , Ensayos Clínicos Controlados Aleatorios como Asunto
15.
Plant Dis ; 96(9): 1383, 2012 Sep.
Artículo en Inglés | MEDLINE | ID: mdl-30727197

RESUMEN

Spineless selections of Carthamus tinctorius (safflower) are grown as commercial field grown cutflower crops in coastal California. In 2010, field plantings of spineless safflower in Santa Clara County developed symptoms of a wilt disease. Affected plants were stunted and slow to develop. As plants developed flower buds, lower leaves turned yellow and wilted. As disease developed, lower leaves turned tan and desiccated; in extreme cases, the entire plant wilted and died. Examination of the taproot and stem vascular tissue revealed a tan to light brown, longitudinal, vascular discoloration. Disease distribution was patchy but in some plantings up to 50% of the plants were unharvestable due to loss of quality or plant death. Isolation from symptomatic vascular tissue consistently resulted in the recovery of a fungus with white aerial mycelium, verticillate conidiophores, single-celled, ovoid to ellipsoid, hyaline conidia, and solitary black microsclerotia that were rounded to elongated or irregular in shape. Three single conidial isolates were chosen for species and race identification after DNA extraction using the FastDNASPIN Kit (MP Biomedicals, Solon, OH). Verticillium species-specific PCR amplified a 500-bp amplicon that is specific to Verticillium dahliae from all three isolates. All three isolates also amplified the race 2-specific 270-bp band in PCR. No amplification was observed in race 1-specific PCR. Based on morphological and molecular data, the fungus was identified as V. dahliae (1,3). Pathogenicity of two isolates was tested individually by soil drench inoculations using 10 ml of conidial suspensions (7 × 106 conidia/ml) for each of 10 containerized plants grown in a peat moss mix in 7.6 cm diameter pots. Five safflower selections were inoculated and maintained in a greenhouse. After 6 weeks, as plants began to form flowers, inoculated plants showed lower leaf dieback and plant wilting. Vascular discoloration was observed when plants were dissected. V. dahliae was consistently recovered from symptomatic tissue. Control plants that only received water did not develop symptoms. The experiment was repeated and the results were consistent. To our knowledge, this is the first report of Verticillium wilt of ornamental, spineless safflower. This disease has been reported previously on agronomic safflower grown as an oilseed crop (2). This finding has significance for coastal crop rotation decisions as ornamental safflower is yet another host that could augment V. dahliae soil inoculum levels for crops such as strawberry and vegetables. References: (1) P. Inderbitzin et al. PLoS One 6: e28341, 2011. (2) J. M. Klisiewicz. Plant Dis. 65:237, 1981. (3) Maruthachalam et al. Phytopathology 100:1222, 2010.

16.
Hong Kong Med J ; 18 Suppl 2: 31-6, 2012 Feb.
Artículo en Inglés | MEDLINE | ID: mdl-22311359

RESUMEN

1. A SARS vaccine was produced based on recombinant native full-length Spike-protein trimers (triSpike) and efficient establishment of a vaccination procedure in rodents. 2. Antibody-mediated enhancement of SARS-CoV infection with anti-SARS-CoV Spike immune-serum was observed in vitro. 3. Antibody-mediated infection of SARS-CoV triggers entry into human haematopoietic cells via an FcγR-dependent and ACE2-, pH-, cysteine-protease-independent pathways. 4. The antibody-mediated enhancement phenomenon is not a mandatory component of the humoral immune response elicited by SARS vaccines, as pure neutralising antibody only could be obtained. 5. Occurrence of immune-mediated enhancement of SARS-CoV infection raises safety concerns regarding the use of SARS-CoV vaccine in humans and enables new ways to investigate SARS pathogenesis (tropism and immune response deregulation).


Asunto(s)
Anticuerpos Neutralizantes/metabolismo , Acrecentamiento Dependiente de Anticuerpo , Glicoproteínas de Membrana/inmunología , Síndrome Respiratorio Agudo Grave/inmunología , Coronavirus Relacionado al Síndrome Respiratorio Agudo Severo/inmunología , Proteínas del Envoltorio Viral/inmunología , Internalización del Virus , Enzima Convertidora de Angiotensina 2 , Animales , Anticuerpos Antivirales/metabolismo , Línea Celular Tumoral , Proteasas de Cisteína/metabolismo , Humanos , Concentración de Iones de Hidrógeno , Ratones , Ratones Endogámicos BALB C , Monocitos , Peptidil-Dipeptidasa A/metabolismo , Receptores Fc/metabolismo , Coronavirus Relacionado al Síndrome Respiratorio Agudo Severo/fisiología , Glicoproteína de la Espiga del Coronavirus , Vacunas
17.
Phytopathology ; 101(3): 340-8, 2011 Mar.
Artículo en Inglés | MEDLINE | ID: mdl-21043579

RESUMEN

Increasing demands for value-added salad products have triggered revolutionary changes in the production practices of vegetable salad crops in recent years. One of the pivotal changes is the adaptation of 2-m-wide beds for increased vegetable biomass per unit area. The move away from the traditional 1-m-wide raised beds in cool-season vegetable production and the associated irrigation practices potentially can have a major influence on diseases affecting cool-season vegetables. To assess the potential impacts of this shift on lettuce drop caused by Sclerotinia minor and S. sclerotiorum, the two bed widths and different irrigation frequencies within each were compared in two separate field experiments over four lettuce crops in 2 years. Treatments included 1- and 2-m bed widths with twice-weekly, weekly and biweekly drip irrigation serving as subplot treatments that were begun immediately following thinning. Incidence of lettuce drop was evaluated weekly thereafter until maturity. For S. sclerotiorum, 36 half-liter soil samples were also collected once each season and assayed for the number of sclerotia, and apothecia were counted weekly in a 10-m(2) area for each plot. Regardless of the species, the effects of bed width and irrigation frequency were both significant. Twice-weekly irrigation and 2-m bed width resulted in higher lettuce drop incidence than other treatments. For S. sclerotiorum, twice-weekly irrigation and 2-m bed width also significantly increased the number of apothecia per unit area and the accumulation of soilborne sclerotia over multiple cropping seasons. Results demonstrated that the 2-m bed width combined with the practiced frequency of irrigations can result in higher lettuce drop caused by S. minor and increased incidence of airborne infection by S. sclerotiorum in the Salinas Valley where, historically, it has not been a serious threat. Increased incidence of S. sclerotiorum infection in commercial lettuce fields in the Salinas Valley between 2001 and 2006 validates these experimental results. These relatively new crop production practices can alter the balance of the two Sclerotinia spp. that has long existed in California.


Asunto(s)
Riego Agrícola/métodos , Ascomicetos/crecimiento & desarrollo , Ascomicetos/patogenicidad , Lactuca/microbiología , Enfermedades de las Plantas/microbiología , Microbiología del Suelo , Ascomicetos/fisiología , California , Humanos , Lactuca/crecimiento & desarrollo , Especificidad de la Especie , Esporas Fúngicas , Factores de Tiempo
18.
Phytopathology ; 101(3): 358-66, 2011 Mar.
Artículo en Inglés | MEDLINE | ID: mdl-20942653

RESUMEN

Coniothyrium minitans, marketed as Contans, has become a standard management tool against Sclerotinia sclerotiorum in a variety of crops, including winter lettuce. However, it has been ineffective against lettuce drop caused by S. minor. The interactions between C. minitans and S minor were investigated to determine the most susceptible stage in culture to attack by C. minitans, and to determine its consistency on S minor isolates belonging to four major mycelial compatibility groups (MCGs). Four isolates of S. minor MCG 1 and 5 each from MCGs 2 and 3 and one from MCG 4 were treated in culture at purely mycelial, a few immature sclerotial, and fully mature sclerotial phases with a conidial suspension of C. minitans. Sclerotia from all treatments were harvested after 4 weeks, air dried, weighed, and plated on potato dextrose agar for recovery of C. minitans. S. minor formed the fewest sclerotia in plates that received C. minitans at the mycelial stage; C. minitans was recovered from nearly all sclerotia from this treatment and sclerotial mortality was total. However, the response of MCGs was inconsistent and variable. Field experiments to determine the efficacy of C. minitans relative to the registered fungicide, Endura, on lettuce drop incidence and soil inoculum dynamics were conducted from 2006 to 2009. All Contans treatments had significantly lower numbers of sclerotia than Endura and unsprayed control treatments, and drop incidence was as low as in Endura-treated plots (P > 0.05). Although the lower levels of lettuce drop in Contans treatments were correlated with significantly lower levels of sclerotia, the lower levels of lettuce drop, despite the presence of higher inoculum in the Endura treatment, was attributable to the prevention of infection by S. minor. A useful approach to sustained lettuce drop management is to employ Contans to lower the number of sclerotia in soil and to apply Endura to prevent S. minor infection within a cropping season.


Asunto(s)
Ascomicetos/fisiología , Ascomicetos/patogenicidad , Lactuca/microbiología , Control Biológico de Vectores/métodos , Enfermedades de las Plantas/prevención & control , Microbiología del Suelo , Análisis de Varianza , Ascomicetos/crecimiento & desarrollo , Ascomicetos/metabolismo , Progresión de la Enfermedad , Enfermedades de las Plantas/microbiología , Especificidad de la Especie
19.
Phytopathology ; 101(5): 523-34, 2011 May.
Artículo en Inglés | MEDLINE | ID: mdl-21219133

RESUMEN

Cauliflower (Brassica oleracea var. botrytis subvar. cauliflora) is susceptible to wilt caused by Verticillium dahliae but broccoli (B. oleracea var. italica subvar. cyamosa) is not. Infection of broccoli and cauliflower by a green fluorescent protein-expressing isolate of V. dahliae was examined using epifluorescence and confocal laser-scanning microscopy to follow infection and colonization in relation to plant phenology. Plant glucosinolate, phenolic, and lignin contents were also assayed at 0, 4, 14, and 28 days postinoculation. V. dahliae consistently infected and colonized the vascular tissues of all cauliflower plants regardless of age at inoculation, with the pathogen ultimately appearing in the developing seed; however, colonization decreased with plant age. In broccoli, V. dahliae infected and colonized root and stem xylem tissues of plants inoculated at 1, 2, or 3 weeks postemergence. However, V. dahliae colonized only the root xylem and the epidermal and cortical tissues of broccoli plants inoculated at 4, 5, and 6 weeks postemergence. The frequency of reisolation of V. dahliae from the stems (4 to 22%) and roots (10 to 40%) of mature broccoli plants was lower than for cauliflower stems (25 to 64%) and roots (31 to 71%). The mean level of aliphatic glucosinolates in broccoli roots was 6.18 times higher than in the shoots and did not vary with age, whereas it was 3.65 times higher in cauliflower shoots than in the roots and there was a proportional increase with age. Indole glucosinolate content was identical in both cauliflower and broccoli, and both indole and aromatic glucosinolates did not vary with plant age in either crop. Qualitative differences in characterized glucosinolates were observed between broccoli and cauliflower but no differences were observed between inoculated and noninoculated plants for either broccoli or cauliflower. However, the phenolic and lignin contents were significantly higher in broccoli following inoculation than in noninoculated broccoli or inoculated cauliflower plants. The increased resistance of broccoli to V. dahliae infection was related to the increase in phenolic and lignin contents. Significant differential accumulation of glucosinolates associated with plant phenology may also contribute to the resistant and susceptible reactions of broccoli and cauliflower, respectively, against V. dahliae.


Asunto(s)
Brassica/microbiología , Enfermedades de las Plantas/microbiología , Verticillium/patogenicidad , Brassica/química , Glucosinolatos/análisis , Interacciones Huésped-Patógeno , Lignina/análisis , Microscopía Confocal , Fenol/análisis , Fenotipo , Raíces de Plantas/química , Raíces de Plantas/microbiología , Tallos de la Planta/química , Tallos de la Planta/microbiología , Semillas/química , Semillas/microbiología , Factores de Tiempo , Verticillium/aislamiento & purificación , Xilema/química , Xilema/microbiología
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