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1.
Plant Physiol ; 191(1): 199-218, 2023 01 02.
Artículo en Inglés | MEDLINE | ID: mdl-36383186

RESUMEN

The regulation of root Plasma membrane (PM) Intrinsic Protein (PIP)-type aquaporins (AQPs) is potentially important for salinity tolerance. However, the molecular and cellular details underlying this process in halophytes remain unclear. Using free-flow electrophoresis and label-free proteomics, we report that the increased abundance of PIPs at the PM of the halophyte ice plant (Mesembryanthemum crystallinum L.) roots under salinity conditions is regulated by clathrin-coated vesicles (CCV). To understand this regulation, we analyzed several components of the M. crystallinum CCV complexes: clathrin light chain (McCLC) and subunits µ1 and µ2 of the adaptor protein (AP) complex (McAP1µ and McAP2µ). Co-localization analyses revealed the association between McPIP1;4 and McAP2µ and between McPIP2;1 and McAP1µ, observations corroborated by mbSUS assays, suggesting that AQP abundance at the PM is under the control of CCV. The ability of McPIP1;4 and McPIP2;1 to form homo- and hetero-oligomers was tested and confirmed, as well as their activity as water channels. Also, we found increased phosphorylation of McPIP2;1 only at the PM in response to salt stress. Our results indicate root PIPs from halophytes might be regulated through CCV trafficking and phosphorylation, impacting their localization, transport activity, and abundance under salinity conditions.


Asunto(s)
Acuaporinas , Mesembryanthemum , Vesículas Cubiertas por Clatrina , Mesembryanthemum/genética , Hielo , Membrana Celular/metabolismo , Proteínas de la Membrana/metabolismo , Estrés Salino , Plantas Tolerantes a la Sal/metabolismo , Acuaporinas/genética , Acuaporinas/metabolismo , Raíces de Plantas/genética , Raíces de Plantas/metabolismo
2.
Plant Physiol ; 186(1): 624-639, 2021 05 27.
Artículo en Inglés | MEDLINE | ID: mdl-33570616

RESUMEN

Lipid structures affect membrane biophysical properties such as thickness, stability, permeability, curvature, fluidity, asymmetry, and interdigitation, contributing to membrane function. Sphingolipids are abundant in plant endomembranes and plasma membranes (PMs) and comprise four classes: ceramides, hydroxyceramides, glucosylceramides, and glycosylinositolphosphoceramides (GIPCs). They constitute an array of chemical structures whose distribution in plant membranes is unknown. With the aim of describing the hydrophobic portion of sphingolipids, 18 preparations from microsomal (MIC), vacuolar (VM), PM, and detergent-resistant membranes (DRM) were isolated from Arabidopsis (Arabidopsis thaliana) leaves. Sphingolipid species, encompassing pairing of long-chain bases and fatty acids, were identified and quantified in these membranes. Sphingolipid concentrations were compared using univariate and multivariate analysis to assess sphingolipid diversity, abundance, and predominance across membranes. The four sphingolipid classes were present at different levels in each membrane: VM was enriched in glucosylceramides, hydroxyceramides, and GIPCs; PM in GIPCs, in agreement with their key role in signal recognition and sensing; and DRM in GIPCs, as reported by their function in nanodomain formation. While a total of 84 sphingolipid species was identified in MIC, VM, PM, and DRM, only 34 were selectively distributed in the four membrane types. Conversely, every membrane contained a different number of predominant species (11 in VM, 6 in PM, and 17 in DRM). This study reveals that MIC, VM, PM, and DRM contain the same set of sphingolipid species but every membrane source contains its own specific assortment based on the proportion of sphingolipid classes and on the predominance of individual species.


Asunto(s)
Arabidopsis/fisiología , Lipidómica , Hojas de la Planta/metabolismo , Esfingolípidos/metabolismo
3.
J Cell Physiol ; 236(9): 6643-6656, 2021 09.
Artículo en Inglés | MEDLINE | ID: mdl-33533043

RESUMEN

Aberrant expression of CD43 in malignant tumors of nonhematopoietic origin such as those from lung, cervix, colon, and breast has been shown to correlate with poor prognosis, providing tumor cells with enhanced motility, anchorage-independent growth, and in vivo tumor size, while protecting the cells of NK lysis and apoptosis. To further characterize the role of CD43 in cell transformation, we tested whether interfering its expression modified the capacity of the A549 non-small cell lung cancer cells to secrete molecules contributing to malignancy. The proteomic analysis of the secretome of serum-starved A549 cells revealed that cells expressing normal levels of CD43 released significantly high levels of molecules involved in extracellular matrix organization, angiogenesis, platelet degranulation, collagen degradation, and inflammation, as compared to CD43 RNAi cells. This data reveals a novel and unexpected role for CD43 in lung cancer development, mainly in remodeling the tumor microenvironment.


Asunto(s)
Matriz Extracelular/metabolismo , Leucosialina/metabolismo , Neoplasias Pulmonares/irrigación sanguínea , Neoplasias Pulmonares/metabolismo , Neovascularización Patológica/metabolismo , Células A549 , Silenciador del Gen , Humanos , Metaloproteinasa 2 de la Matriz/metabolismo , Metaloproteinasa 9 de la Matriz/metabolismo , FN-kappa B/metabolismo , Factor de Transcripción STAT3/metabolismo , Microambiente Tumoral
4.
Mar Drugs ; 17(8)2019 Jul 25.
Artículo en Inglés | MEDLINE | ID: mdl-31349621

RESUMEN

Sea anemone venom contains a complex and diverse arsenal of peptides and proteins of pharmacological and biotechnological interest, however, only venom from a few species has been explored from a global perspective to date. In the present study, we identified the polypeptides present in the venom of the sea anemone Anthopleura dowii Verrill, 1869 through a transcriptomic and proteomic analysis of the tentacles and the proteomic profile of the secreted mucus. In our transcriptomic results, we identified 261 polypeptides related to or predicted to be secreted in the venom, including proteases, neurotoxins that could act as either potassium (K+) or sodium (Na+) channels inhibitors, protease inhibitors, phospholipases A2, and other polypeptides. Our proteomic data allowed the identification of 156 polypeptides-48 exclusively identified in the mucus, 20 in the tentacles, and 88 in both protein samples. Only 23 polypeptides identified by tandem mass spectrometry (MS/MS) were related to the venom and 21 exclusively identified in the mucus, most corresponding to neurotoxins and hydrolases. Our data contribute to the knowledge of evolutionary and venomic analyses of cnidarians, particularly of sea anemones.


Asunto(s)
Venenos de Cnidarios/genética , Venenos de Cnidarios/metabolismo , Moco/metabolismo , Anémonas de Mar/genética , Anémonas de Mar/metabolismo , Transcriptoma/genética , Animales , Toxinas Marinas/metabolismo , Neurotoxinas/genética , Neurotoxinas/metabolismo , Péptido Hidrolasas/genética , Péptido Hidrolasas/metabolismo , Péptidos/genética , Péptidos/metabolismo , Proteómica/métodos , Espectrometría de Masas en Tándem/métodos
5.
Biochim Biophys Acta Mol Cell Res ; 1864(10): 1809-1818, 2017 Oct.
Artículo en Inglés | MEDLINE | ID: mdl-28723420

RESUMEN

The export of membrane proteins along the secretory pathway is initiated at the endoplasmic reticulum after proteins are folded and packaged inside this organelle by their recruiting into the coat complex COPII vesicles. It is proposed that cargo receptors are required for the correct transport of proteins to its target membrane, however, little is known about ER export signals for cargo receptors. Erv14/Cornichon belong to a well conserved protein family in Eukaryotes, and have been proposed to function as cargo receptors for many transmembrane proteins. Amino acid sequence alignment showed the presence of a conserved acidic motif in the C-terminal in homologues from plants and yeast. Here, we demonstrate that mutation of the C-terminal acidic motif from ScErv14 or OsCNIH1, did not alter the localization of these cargo receptors, however it modified the proper targeting of the plasma membrane transporters Nha1p, Pdr12p and Qdr2p. Our results suggest that mistargeting of these plasma membrane proteins is a consequence of a weaker interaction between the cargo receptor and cargo proteins caused by the mutation of the C-terminal acidic motif.


Asunto(s)
Secuencias de Aminoácidos/genética , Membrana Celular/genética , Proteínas de la Membrana/genética , Proteínas de Saccharomyces cerevisiae/genética , Transportadoras de Casetes de Unión a ATP/genética , Secuencia de Aminoácidos/genética , Vesículas Cubiertas por Proteínas de Revestimiento/genética , Vesículas Cubiertas por Proteínas de Revestimiento/metabolismo , Membrana Celular/metabolismo , Retículo Endoplásmico/genética , Retículo Endoplásmico/metabolismo , Aparato de Golgi/genética , Aparato de Golgi/metabolismo , Proteínas de la Membrana/metabolismo , Proteínas de Transporte de Membrana/genética , Oryza/genética , Pliegue de Proteína , Transporte de Proteínas/genética , Saccharomyces cerevisiae/genética , Alineación de Secuencia , Intercambiadores de Sodio-Hidrógeno/genética
6.
Plant Physiol ; 173(1): 390-416, 2017 01.
Artículo en Inglés | MEDLINE | ID: mdl-27837088

RESUMEN

Ettlia oleoabundans is a nonsequenced oleaginous green microalga. Despite the significant biotechnological interest in producing value-added compounds from the acyl lipids of this microalga, a basic understanding of the physiology and biochemistry of oleaginous microalgae is lacking, especially under nitrogen deprivation conditions known to trigger lipid accumulation. Using an RNA sequencing-based proteomics approach together with manual annotation, we are able to provide, to our knowledge, the first membrane proteome of an oleaginous microalga. This approach allowed the identification of novel proteins in E. oleoabundans, including two photoprotection-related proteins, Photosystem II Subunit S and Maintenance of Photosystem II under High Light1, which were considered exclusive to higher photosynthetic organisms, as well as Retinitis Pigmentosa Type 2-Clathrin Light Chain, a membrane protein with a novel domain architecture. Free-flow zonal electrophoresis of microalgal membranes coupled to liquid chromatography-tandem mass spectrometry proved to be a useful technique for determining the intracellular location of proteins of interest. Carbon-flow compartmentalization in E. oleoabundans was modeled using this information. Molecular phylogenetic analyses of protein markers and 18S ribosomal DNA support the reclassification of E. oleoabundans within the trebouxiophycean microalgae, rather than with the Chlorophyceae class, in which it is currently classified, indicating that it may not be closely related to the model green alga Chlamydomonas reinhardtii A detailed survey of biological processes taking place in the membranes of nitrogen-deprived E. oleoabundans, including lipid metabolism, provides insights into the basic biology of this nonmodel organism.


Asunto(s)
Proteínas Algáceas/metabolismo , Membrana Celular/metabolismo , Proteínas de la Membrana/metabolismo , Microalgas/clasificación , Microalgas/fisiología , Proteoma/metabolismo , Proteómica/métodos , Secuencia de Bases , Carbono/metabolismo , Transporte de Electrón , Electroforesis , Metabolismo de los Lípidos , Espectrometría de Masas , Proteínas de la Membrana/química , Microalgas/metabolismo , Mitocondrias/metabolismo , Fosforilación Oxidativa , Fotosíntesis , Filogenia , Dominios Proteicos , Fracciones Subcelulares/metabolismo
7.
Biochim Biophys Acta ; 1858(1): 67-74, 2016 Jan.
Artículo en Inglés | MEDLINE | ID: mdl-26440927

RESUMEN

The yeast Nha1p Na(+), K(+)/H(+) antiporter has a house-keeping role in pH and cation homeostasis. It is also needed to alleviate excess Na(+) or K(+) from the cytoplasm under high external concentrations of these cations. Erv14p, a putative cargo receptor for transmembrane proteins is required for trafficking of Nha1p from the endoplasmic reticulum to the plasma membrane. Sensitivity to high Na(+) concentrations of the erv14 mutant associated to the intracellular mislocalization of Nha1p-GFP, together with a lower Na(+) efflux, indicate the involvement of this mutual association to accomplish the survival of the yeast cell upon sodium stress. This observation is supported by the protein-protein interaction between Erv14p and Nha1p detected by the mating-based Split Ubiquitin System and co-immunoprecipitation assays. Our results indicate that even though Erv14p interacts with Nha1p through the TMD, the C-terminal is important not only for the efficient delivery of Nha1p to the plasma membrane but also for its dimerization to accomplish its role in yeast salt tolerance.


Asunto(s)
Proteínas de Transporte de Catión/química , Regulación Fúngica de la Expresión Génica , Proteínas de la Membrana/química , Potasio/metabolismo , Protones , Proteínas de Saccharomyces cerevisiae/química , Saccharomyces cerevisiae/metabolismo , Cloruro de Sodio/metabolismo , Intercambiadores de Sodio-Hidrógeno/química , Transporte Biológico , Proteínas de Transporte de Catión/genética , Proteínas de Transporte de Catión/metabolismo , Cationes Monovalentes , Proteínas de la Membrana/genética , Proteínas de la Membrana/metabolismo , Potasio/farmacología , Unión Proteica , Dominios y Motivos de Interacción de Proteínas , Multimerización de Proteína , Estructura Secundaria de Proteína , Proteínas Recombinantes de Fusión/química , Proteínas Recombinantes de Fusión/genética , Proteínas Recombinantes de Fusión/metabolismo , Saccharomyces cerevisiae/efectos de los fármacos , Saccharomyces cerevisiae/genética , Proteínas de Saccharomyces cerevisiae/genética , Proteínas de Saccharomyces cerevisiae/metabolismo , Tolerancia a la Sal , Cloruro de Sodio/farmacología , Intercambiadores de Sodio-Hidrógeno/genética , Intercambiadores de Sodio-Hidrógeno/metabolismo
8.
Immunology ; 150(1): 87-99, 2017 Jan.
Artículo en Inglés | MEDLINE | ID: mdl-27606486

RESUMEN

CD43 is one of the most abundant co-stimulatory molecules on a T-cell surface; it transduces activation signals through its cytoplasmic domain, contributing to modulation of the outcome of T-cell responses. The aim of this study was to uncover new signalling pathways regulated by this sialomucin. Analysis of changes in protein abundance allowed us to identify pyruvate kinase isozyme M2 (PKM2), an enzyme of the glycolytic pathway, as an element potentially participating in the signalling cascade resulting from the engagement of CD43 and the T-cell receptor (TCR). We found that the glycolytic activity of this enzyme was not significantly increased in response to TCR+CD43 co-stimulation, but that PKM2 was tyrosine phosphorylated, suggesting that it was performing moonlight functions. We report that phosphorylation of both Y105 of PKM2 and of Y705 of signal transducer and activator of transcription 3 was induced in response to TCR+CD43 co-stimulation, resulting in activation of the mitogen-activated protein kinase kinase 5/extracellular signal-regulated kinase 5 (MEK5/ERK5) pathway. ERK5 and the cAMP response element binding protein (CREB) were activated, and c-Myc and nuclear factor-κB (p65) nuclear localization, as well as Bad phosphorylation, were augmented. Consistent with this, expression of human CD43 in a murine T-cell hybridoma favoured cell survival. Altogether, our data highlight novel signalling pathways for the CD43 molecule in T lymphocytes, and underscore a role for CD43 in promoting cell survival through non-glycolytic functions of metabolic enzymes.


Asunto(s)
Linfocitos T CD4-Positivos/inmunología , Leucosialina/metabolismo , Proteína Quinasa 7 Activada por Mitógenos/metabolismo , Piruvato Quinasa/metabolismo , Factor de Transcripción STAT3/metabolismo , Animales , Supervivencia Celular , Humanos , Hibridomas , Inmunidad Celular , Células Jurkat , Activación de Linfocitos , MAP Quinasa Quinasa 5/metabolismo , Ratones , FN-kappa B/metabolismo , Fosforilación , Proteínas Proto-Oncogénicas c-myc/metabolismo , Factor de Transcripción STAT3/genética , Transducción de Señal
9.
Planta ; 246(3): 433-451, 2017 Sep.
Artículo en Inglés | MEDLINE | ID: mdl-28455771

RESUMEN

MAIN CONCLUSION: Tobacco germinated and grew in the presence of high concentrations of cadmium and zinc without toxic symptoms. Evidence suggests that these ions are sequestered into the vacuole by heavy metal/H + exchanger mechanisms. Heavy metal hyperaccumulation and hypertolerance are traits shared by a small set of plants which show specialized physiological and molecular adaptations allowing them to accumulate and sequester toxic metal ions. Nicotiana tabacum was used to test its potential as a metal-accumulator in a glass house experiment. Seed germination was not affected in the presence of increasing concentrations of zinc and cadmium. Juvenile and adult plants could concentrate CdCl2 and ZnSO4 to levels exceeding those in the hydroponic growth medium and maintained or increased their leaf dry weight when treated with 0.5- or 1-mM CdCl2 or 1-mM ZnSO4 for 5 days. Accumulation of heavy metals did not affect the chlorophyll and carotenoid levels, while variable effects were observed in cell sap osmolarity. Heavy metal-dependent H+ transport across the vacuole membrane was monitored using quinacrine fluorescence quenching. Cadmium- or zinc-dependent fluorescence recovery revealed that increasing concentrations of heavy metals stimulated the activities of the tonoplast Cd2+ or Zn2+/H+ exchangers. Immunodetection of the V-ATPase subunits showed that the increased proton transport by zinc was not due to changes in protein amount. MTP1 and MTP4 immunodetection and semiquantitative RT-PCR of NtMTP1, NtNRAMP1, and NtZIP1 helped to identify the genes that are likely involved in sequestration of cadmium and zinc in the leaf and root tissue. Finally, we demonstrated that cadmium and zinc treatments induced an accumulation of zinc in leaf tissues. This study shows that N. tabacum possesses a hyperaccumulation response, and thus could be used for phytoremediation purposes.


Asunto(s)
Antiportadores/metabolismo , Cadmio/farmacología , Nicotiana/fisiología , Proteínas de Plantas/metabolismo , Zinc/farmacología , Adaptación Fisiológica , Cadmio/metabolismo , Cloruro de Cadmio/farmacología , Carotenoides/metabolismo , Clorofila/metabolismo , Electroforesis en Gel de Poliacrilamida , Germinación/efectos de los fármacos , Immunoblotting , Metales Pesados/metabolismo , Hojas de la Planta/metabolismo , Reacción en Cadena de la Polimerasa , Nicotiana/efectos de los fármacos , Nicotiana/metabolismo , Vacuolas/metabolismo , Zinc/metabolismo , Sulfato de Zinc/farmacología
10.
BMC Plant Biol ; 16(1): 110, 2016 05 10.
Artículo en Inglés | MEDLINE | ID: mdl-27160145

RESUMEN

BACKGROUND: Epidermal bladder cells (EBC) are large single-celled, specialized, and modified trichomes found on the aerial parts of the halophyte Mesembryanthemum crystallinum. Recent development of a simple but high throughput technique to extract the contents from these cells has provided an opportunity to conduct detailed single-cell-type analyses of their molecular characteristics at high resolution to gain insight into the role of these cells in the salt tolerance of the plant. RESULTS: In this study, we carry out large-scale complementary quantitative proteomic studies using both a label (DIGE) and label-free (GeLC-MS) approach to identify salt-responsive proteins in the EBC extract. Additionally we perform an ionomics analysis (ICP-MS) to follow changes in the amounts of 27 different elements. Using these methods, we were able to identify 54 proteins and nine elements that showed statistically significant changes in the EBC from salt-treated plants. GO enrichment analysis identified a large number of transport proteins but also proteins involved in photosynthesis, primary metabolism and Crassulacean acid metabolism (CAM). Validation of results by western blot, confocal microscopy and enzyme analysis helped to strengthen findings and further our understanding into the role of these specialized cells. As expected EBC accumulated large quantities of sodium, however, the most abundant element was chloride suggesting the sequestration of this ion into the EBC vacuole is just as important for salt tolerance. CONCLUSIONS: This single-cell type omics approach shows that epidermal bladder cells of M. crystallinum are metabolically active modified trichomes, with primary metabolism supporting cell growth, ion accumulation, compatible solute synthesis and CAM. Data are available via ProteomeXchange with identifier PXD004045.


Asunto(s)
Mesembryanthemum/metabolismo , Proteínas de Plantas/metabolismo , Plantas Tolerantes a la Sal/metabolismo , Cloruro de Sodio/metabolismo , Regulación de la Expresión Génica de las Plantas , Espectrometría de Masas , Mesembryanthemum/química , Mesembryanthemum/genética , Proteínas de Plantas/química , Proteínas de Plantas/genética , Proteómica , Plantas Tolerantes a la Sal/química , Plantas Tolerantes a la Sal/genética
11.
J Virol ; 89(20): 10359-70, 2015 Oct.
Artículo en Inglés | MEDLINE | ID: mdl-26246569

RESUMEN

UNLABELLED: Astroviruses are small, nonenveloped viruses with a single-stranded positive-sense RNA genome causing acute gastroenteritis in children and immunocompromised patients. Since positive-sense RNA viruses have frequently been found to replicate in association with membranous structures, in this work we characterized the replication of the human astrovirus serotype 8 strain Yuc8 in Caco-2 cells, using density gradient centrifugation and free-flow zonal electrophoresis (FFZE) to fractionate cellular membranes. Structural and nonstructural viral proteins, positive- and negative-sense viral RNA, and infectious virus particles were found to be associated with a distinct population of membranes separated by FFZE. The cellular proteins associated with this membrane population in infected and mock-infected cells were identified by tandem mass spectrometry. The results indicated that membranes derived from multiple cell organelles were present in the population. Gene ontology and protein-protein interaction network analysis showed that groups of proteins with roles in fatty acid synthesis and ATP biosynthesis were highly enriched in the fractions of this population in infected cells. Based on this information, we investigated by RNA interference the role that some of the identified proteins might have in the replication cycle of the virus. Silencing of the expression of genes involved in cholesterol (DHCR7, CYP51A1) and fatty acid (FASN) synthesis, phosphatidylinositol (PI4KIIIß) and inositol phosphate (ITPR3) metabolism, and RNA helicase activity (DDX23) significantly decreased the amounts of Yuc8 genomic and antigenomic RNA, synthesis of the structural protein VP90, and virus yield. These results strongly suggest that astrovirus RNA replication and particle assembly take place in association with modified membranes potentially derived from multiple cell organelles. IMPORTANCE: Astroviruses are common etiological agents of acute gastroenteritis in children and immunocompromised patients. More recently, they have been associated with neurological diseases in mammals, including humans, and are also responsible for different pathologies in birds. In this work, we provide evidence that astrovirus RNA replication and virus assembly occur in contact with cell membranes potentially derived from multiple cell organelles and show that membrane-associated cellular proteins involved in lipid metabolism are required for efficient viral replication. Our findings provide information to enhance our knowledge of astrovirus biology and provide information that might be useful for the development of therapeutic interventions to prevent virus replication.


Asunto(s)
Astroviridae/genética , Membranas Intracelulares/metabolismo , ARN Viral/metabolismo , Proteínas Virales/genética , Replicación Viral/genética , Adenosina Trifosfato/biosíntesis , Astroviridae/metabolismo , Células CACO-2 , Fraccionamiento Celular , ARN Helicasas DEAD-box/genética , ARN Helicasas DEAD-box/metabolismo , Acido Graso Sintasa Tipo I/genética , Acido Graso Sintasa Tipo I/metabolismo , Ácidos Grasos/biosíntesis , Regulación de la Expresión Génica , Interacciones Huésped-Patógeno , Humanos , Receptores de Inositol 1,4,5-Trifosfato/genética , Receptores de Inositol 1,4,5-Trifosfato/metabolismo , Membranas Intracelulares/química , Membranas Intracelulares/virología , Anotación de Secuencia Molecular , Oxidorreductasas actuantes sobre Donantes de Grupo CH-CH/genética , Oxidorreductasas actuantes sobre Donantes de Grupo CH-CH/metabolismo , Fosfotransferasas (Aceptor de Grupo Alcohol)/genética , Fosfotransferasas (Aceptor de Grupo Alcohol)/metabolismo , Mapeo de Interacción de Proteínas , ARN Interferente Pequeño/genética , ARN Interferente Pequeño/metabolismo , ARN Viral/genética , Transducción de Señal , Esterol 14-Desmetilasa/genética , Esterol 14-Desmetilasa/metabolismo , Proteínas Virales/metabolismo
12.
Microb Cell Fact ; 15(1): 173, 2016 Oct 06.
Artículo en Inglés | MEDLINE | ID: mdl-27716202

RESUMEN

BACKGROUND: The heterotrimeric Gα protein Pga1-mediated signaling pathway regulates the entire developmental program in Penicillium chrysogenum, from spore germination to the formation of conidia. In addition it participates in the regulation of penicillin biosynthesis. We aimed to advance the understanding of this key signaling pathway using a proteomics approach, a powerful tool to identify effectors participating in signal transduction pathways. RESULTS: Penicillium chrysogenum mutants with different levels of activity of the Pga1-mediated signaling pathway were used to perform comparative proteomic analyses by 2D-DIGE and LC-MS/MS. Thirty proteins were identified which showed differences in abundance dependent on Pga1 activity level. By modifying the intracellular levels of cAMP we could establish cAMP-dependent and cAMP-independent pathways in Pga1-mediated signaling. Pga1 was shown to regulate abundance of enzymes in primary metabolic pathways involved in ATP, NADPH and cysteine biosynthesis, compounds that are needed for high levels of penicillin production. An in vivo phosphorylated protein containing a pleckstrin homology domain was identified; this protein is a candidate for signal transduction activity. Proteins with possible roles in purine metabolism, protein folding, stress response and morphogenesis were also identified whose abundance was regulated by Pga1 signaling. CONCLUSIONS: Thirty proteins whose abundance was regulated by the Pga1-mediated signaling pathway were identified. These proteins are involved in primary metabolism, stress response, development and signal transduction. A model describing the pathways through which Pga1 signaling regulates different cellular processes is proposed.


Asunto(s)
Proteínas Fúngicas/metabolismo , Subunidades alfa de la Proteína de Unión al GTP/metabolismo , Regulación Fúngica de la Expresión Génica , Penicillium chrysogenum/genética , Penicillium chrysogenum/metabolismo , Proteómica , Transducción de Señal , Proteínas Fúngicas/genética , Subunidades alfa de la Proteína de Unión al GTP/genética , Morfogénesis , Mutación , Fosforilación Oxidativa , Penicillium chrysogenum/química , Dominios Homólogos a Pleckstrina , Purinas/metabolismo , Esporas Fúngicas/crecimiento & desarrollo , Espectrometría de Masas en Tándem , Electroforesis Bidimensional Diferencial en Gel
13.
New Phytol ; 207(3): 627-44, 2015 Aug.
Artículo en Inglés | MEDLINE | ID: mdl-25944243

RESUMEN

Mesembryanthemum crystallinum (ice plant) exhibits extreme tolerance to salt. Epidermal bladder cells (EBCs), developing on the surface of aerial tissues and specialized in sodium sequestration and other protective functions, are critical for the plant's stress adaptation. We present the first transcriptome analysis of EBCs isolated from intact plants, to investigate cell type-specific responses during plant salt adaptation. We developed a de novo assembled, nonredundant EBC reference transcriptome. Using RNAseq, we compared the expression patterns of the EBC-specific transcriptome between control and salt-treated plants. The EBC reference transcriptome consists of 37 341 transcript-contigs, of which 7% showed significantly different expression between salt-treated and control samples. We identified significant changes in ion transport, metabolism related to energy generation and osmolyte accumulation, stress signalling, and organelle functions, as well as a number of lineage-specific genes of unknown function, in response to salt treatment. The salinity-induced EBC transcriptome includes active transcript clusters, refuting the view of EBCs as passive storage compartments in the whole-plant stress response. EBC transcriptomes, differing from those of whole plants or leaf tissue, exemplify the importance of cell type-specific resolution in understanding stress adaptive mechanisms.


Asunto(s)
Mesembryanthemum/citología , Mesembryanthemum/genética , Epidermis de la Planta/citología , Epidermis de la Planta/genética , Salinidad , Transcriptoma/genética , Perfilación de la Expresión Génica , Regulación de la Expresión Génica de las Plantas/efectos de los fármacos , Ontología de Genes , Redes Reguladoras de Genes/efectos de los fármacos , Mesembryanthemum/efectos de los fármacos , Anotación de Secuencia Molecular , Epidermis de la Planta/efectos de los fármacos , ARN Mensajero/genética , ARN Mensajero/metabolismo , Cloruro de Sodio/farmacología , Estrés Fisiológico/efectos de los fármacos , Transcriptoma/efectos de los fármacos
14.
J Exp Bot ; 66(9): 2733-48, 2015 May.
Artículo en Inglés | MEDLINE | ID: mdl-25750424

RESUMEN

Membrane proteins are synthesized and folded in the endoplasmic reticulum (ER), and continue their path to their site of residence along the secretory pathway. The COPII system has been identified as a key player for selecting and directing the fate of membrane and secretory cargo proteins. Selection of cargo proteins within the COPII vesicles is achieved by cargo receptors. The cornichon cargo receptor belongs to a conserved protein family found in eukaryotes that has been demonstrated to participate in the selection of integral membrane proteins as cargo for their correct targeting. Here it is demonstrated at the cellular level that rice cornichon OsCNIH1 interacts with OsHKT1;3 and, in yeast cells, enables the expression of the sodium transporter to the Golgi apparatus. Physical and functional HKT-cornichon interactions are confirmed by the mating-based split ubiquitin system, bimolecular fluorescence complementation, and Xenopus oocyte and yeast expression systems. The interaction between the two proteins occurs in the ER of plant cells and their co-expression in oocytes leads to the sequestration of the transporter in the ER. In the yeast cornichon mutant erv14, OsHKT1;3 is mistargeted, preventing the toxic effects of sodium transport in the cell observed in wild-type cells or in the erv14 mutant that co-expressed OsHKT1;3 with either OsCNIH1 or Erv14p. Identification and characterization of rice cornichon as a possible cargo receptor opens up the opportunity to improve our knowledge on membrane protein targeting in plant cells.


Asunto(s)
Proteínas de Transporte de Catión/metabolismo , Aparato de Golgi/metabolismo , Oryza/metabolismo , Proteínas de Plantas/fisiología , Secuencia de Aminoácidos , Animales , Transporte Biológico , Proteínas de Transporte de Catión/genética , Retículo Endoplásmico/metabolismo , Proteínas de Transporte de Membrana/genética , Proteínas de Transporte de Membrana/metabolismo , Proteínas de Transporte de Membrana/fisiología , Datos de Secuencia Molecular , Oryza/genética , Proteínas de Plantas/genética , Proteínas de Plantas/metabolismo , Mapeo de Interacción de Proteínas , Alineación de Secuencia , Análisis de Secuencia de Proteína , Sodio/metabolismo , Xenopus
15.
Biochim Biophys Acta ; 1830(11): 5305-15, 2013 Nov.
Artículo en Inglés | MEDLINE | ID: mdl-23928041

RESUMEN

BACKGROUND: Sea urchin sperm motility is regulated by Speract, a sperm-activating peptide (SAP) secreted from the outer egg coat. Upon binding to its receptor in the sperm flagellum, Speract induces a series of ionic and metabolic changes in Strongylocentrotus purpuratus spermatozoa that regulate their motility. Among these events, protein phosphorylation is one of the most relevant and evidence indicates that some proteins of the Speract signaling cascade localize in low density detergent-insoluble membranes (LD-DIM). METHODS: LD-DIM-derived proteins from immotile, motile or Speract-stimulated S. purpuratus sperm were resolved in 2-D gels and the PKA and PKC substrates detected with specific antibodies were identified by LC-MS/MS. RESULTS: Differential PKA and PKC substrate phosphorylation levels among the LD-DIM isolated from sperm in different motility conditions were found and identified by mass spectrometry as: ATP synthase, creatine kinase, NADH dehydrogenase (ubiquinone) flavoprotein 2, succinyl-CoA ligase and the voltage-dependent anion channel 2 (VDAC2), which are mitochondrial proteins, as well as, the cAMP-dependent protein kinase type II regulatory (PKA RII) subunit, Tubulin ß chain and Actin Cy I changed their phosphorylation state. CONCLUSIONS: Some mitochondrial proteins regulated by PKA or PKC may influence sea urchin sperm motility. GENERAL SIGNIFICANCE: The fact that a high percentage (66%) of the PKA or PKC substrates identified in LD-DIM are mitochondrial proteins suggests that the phosphorylation of these proteins modulates sea urchin sperm motility via Speract stimulation by providing sufficient energy to sperm physiology. Those mitochondrial proteins are indeed PKA- or PKC-substrates in the sea urchin spermatozoa.


Asunto(s)
Proteínas Quinasas Dependientes de AMP Cíclico/metabolismo , Proteínas Mitocondriales/metabolismo , Proteína Quinasa C/metabolismo , Motilidad Espermática/fisiología , Espermatozoides/fisiología , Strongylocentrotus purpuratus/fisiología , Animales , Proteínas Quinasas Dependientes de AMP Cíclico/química , Detergentes/química , Masculino , Proteínas Mitocondriales/química , Oligopéptidos/metabolismo , Fosforilación/fisiología , Proteína Quinasa C/química , Erizos de Mar , Transducción de Señal , Cola del Espermatozoide/metabolismo , Cola del Espermatozoide/fisiología , Espermatozoides/química , Espermatozoides/metabolismo , Strongylocentrotus purpuratus/química , Strongylocentrotus purpuratus/metabolismo
16.
Proteomics ; 13(12-13): 1801-15, 2013 Jun.
Artículo en Inglés | MEDLINE | ID: mdl-23512887

RESUMEN

Plants are continually challenged to recognize and respond to adverse changes in their environment to avoid detrimental effects on growth and development. Understanding the mechanisms that crop plants employ to resist and tolerate abiotic stress is of considerable interest for designing agriculture breeding strategies to ensure sustainable productivity. The application of proteomics technologies to advance our knowledge in crop plant abiotic stress tolerance has increased dramatically in the past few years as evidenced by the large amount of publications in this area. This is attributed to advances in various technology platforms associated with MS-based techniques as well as the accessibility of proteomics units to a wider plant research community. This review summarizes the work which has been reported for major crop plants and evaluates the findings in context of the approaches that are widely employed with the aim to encourage broadening the strategies used to increase coverage of the proteome.


Asunto(s)
Productos Agrícolas , Proteínas de Plantas , Proteómica , Estrés Fisiológico , Adaptación Fisiológica , Espectrometría de Masas
17.
Proteomics ; 12(18): 2862-5, 2012 Sep.
Artículo en Inglés | MEDLINE | ID: mdl-22848050

RESUMEN

Plant epidermal trichomes are as varied in morphology as they are in function. In the halophyte Mesembryanthemum crystallinum, specialized trichomes called epidermal bladder cells (EBC) line the surface of leaves and stems, and increase dramatically in size and volume upon plant salt-treatment. These cells have been proposed to have roles in plant defense and UV protection, but primarily in sodium sequestration and as water reservoirs. To gain further understanding into the roles of EBC, a cell-type-specific proteomics approach was taken in which precision single-cell sampling of cell sap from individual EBC was combined with shotgun peptide sequencing (LC-MS/MS). Identified proteins showed diverse biological functions and cellular locations, with a high representation of proteins involved in H(+)-transport, carbohydrate metabolism, and photosynthesis. The proteome of EBC provides insight into the roles of these cells in ion and water homeostasis and raises the possibility that they are photosynthetically active and functioning in Crassulacean acid metabolism.


Asunto(s)
Mesembryanthemum/citología , Proteínas de Plantas/análisis , Proteínas de Plantas/metabolismo , Plantas Tolerantes a la Sal/citología , Mesembryanthemum/química , Mesembryanthemum/metabolismo , Proteómica , Plantas Tolerantes a la Sal/metabolismo , Espectrometría de Masas en Tándem
18.
Plant Cell Environ ; 35(3): 485-501, 2012 Mar.
Artículo en Inglés | MEDLINE | ID: mdl-21895697

RESUMEN

Mesembryanthemum crystallinum exhibits induction of Crassulacean acid metabolism (CAM) after a threshold stage of development, by exposure to long days with high light intensities or by water and salt stress. During the CAM cycle, fluctuations in carbon partitioning within the cell lead to transient drops in osmotic potential, which are likely stabilized/balanced by passive movement of water via aquaporins (AQPs). Protoplast swelling assays were used to detect changes in water permeability during the day/night cycle of CAM. To assess the role of AQPs during the same period, we followed transcript accumulation and protein abundance of four plasma membrane intrinsic proteins (PIPs) and one tonoplast intrinsic protein (TIP). CAM plants showed a persistent rhythm of specific AQP protein abundance changes throughout the day/night cycle, including changes in amount of McPIP2;1, McTIP1;2, McPIP1;4 and McPIP1;5, while the abundance of McPIP1;2 was unchanged. These protein changes did not appear to be coordinated with transcript levels for any of the AQPs analysed; however, they did occur in parrallel to alterations in water permeability, as well as variations in cell osmolarity, pinitol, glucose, fructose and phosphoenolpyruvate carboxylase (PEPc) levels measured throughout the day/night CAM cycle. Results suggest a role for AQPs in maintaining water balance during CAM and highlight the complexity of protein expression during the CAM cycle.


Asunto(s)
Acuaporinas/metabolismo , Proteínas de la Membrana/metabolismo , Mesembryanthemum/genética , Fotoperiodo , Proteínas de Plantas/metabolismo , Acuaporinas/genética , Permeabilidad de la Membrana Celular , Regulación de la Expresión Génica de las Plantas , Proteínas de la Membrana/genética , Mesembryanthemum/fisiología , Redes y Vías Metabólicas , Proteínas de Plantas/genética , Protoplastos/fisiología , Salinidad , Agua/fisiología
19.
Plant Cell ; 21(12): 4044-58, 2009 Dec.
Artículo en Inglés | MEDLINE | ID: mdl-20028841

RESUMEN

To examine the role of the tonoplast in plant salt tolerance and identify proteins involved in the regulation of transporters for vacuolar Na(+) sequestration, we exploited a targeted quantitative proteomics approach. Two-dimensional differential in-gel electrophoresis analysis of free flow zonal electrophoresis separated tonoplast fractions from control, and salt-treated Mesembryanthemum crystallinum plants revealed the membrane association of glycolytic enzymes aldolase and enolase, along with subunits of the vacuolar H(+)-ATPase V-ATPase. Protein blot analysis confirmed coordinated salt regulation of these proteins, and chaotrope treatment indicated a strong tonoplast association. Reciprocal coimmunoprecipitation studies revealed that the glycolytic enzymes interacted with the V-ATPase subunit B VHA-B, and aldolase was shown to stimulate V-ATPase activity in vitro by increasing the affinity for ATP. To investigate a physiological role for this association, the Arabidopsis thaliana cytoplasmic enolase mutant, los2, was characterized. These plants were salt sensitive, and there was a specific reduction in enolase abundance in the tonoplast from salt-treated plants. Moreover, tonoplast isolated from mutant plants showed an impaired ability for aldolase stimulation of V-ATPase hydrolytic activity. The association of glycolytic proteins with the tonoplast may not only channel ATP to the V-ATPase, but also directly upregulate H(+)-pump activity.


Asunto(s)
Fructosa-Bifosfato Aldolasa/metabolismo , Mesembryanthemum/genética , Fosfopiruvato Hidratasa/metabolismo , Proteoma/metabolismo , Plantas Tolerantes a la Sal/genética , ATPasas de Translocación de Protón Vacuolares/metabolismo , Arabidopsis/enzimología , Arabidopsis/genética , Electroforesis en Gel Bidimensional , Fructosa-Bifosfato Aldolasa/genética , Regulación de la Expresión Génica de las Plantas , Mesembryanthemum/enzimología , Microsomas , Fosfopiruvato Hidratasa/genética , Proteómica , Plantas Tolerantes a la Sal/enzimología , Cloruro de Sodio/metabolismo , Espectrometría de Masa por Ionización de Electrospray , ATPasas de Translocación de Protón Vacuolares/genética , Vacuolas/metabolismo
20.
J Biol Chem ; 285(22): 16739-47, 2010 May 28.
Artículo en Inglés | MEDLINE | ID: mdl-20332086

RESUMEN

The increased expression of McPIP2;1 (MipC), a root-specific aquaporin (AQP) from Mesembryanthemum crystallinum, under salt stress has suggested a role for this AQP in the salt tolerance of the plant. However, whether McPIP2;1 transports water or another solute and how its activity is regulated are so far unknown. Therefore, wild type (wt) or mutated McPIP2;1 protein was expressed in Xenopus laevis oocytes. Then, the osmotic water permeability (P(f)) of the oocytes membrane was assessed by hypotonic challenges. Selectivity of McPIP2;1 to water was determined by radiolabeled glycerol or urea uptake assays. Moreover, swelling and in vitro phosphorylation assays revealed that both water permeation and phosphorylation status of McPIP2;1 were significantly increased by the phosphorylation agonists okadaic acid (OA), phorbol myristate acetate (PMA), and 8-Br-cAMP, and markedly decreased by the inhibitory peptides PKI 14-22 and PKC 20-28, inhibitors of protein kinases A (PKA) and C (PKC), respectively. Substitution of Ser(123) or both, Ser(123) and Ser(282), abolished the water channel activity of McPIP2;1 while substitution of Ser(282) only partially inhibited it (51.9% inhibition). Despite lacking Ser(123) and/or Ser(282), the McPIP2;1 mutant forms were still phosphorylated in vitro, which suggests that phosphorylation may have a dual role on this AQP. Our results indicate that McPIP2;1 water permeability depends completely on Ser(123) and is positively regulated by PKA- and PKC-mediated phosphorylation. Regulation of the phosphorylation status of McPIP2;1 may contribute to control water transport through root cells when the plant is subjected to high salinity conditions.


Asunto(s)
Acuaporinas/química , Mesembryanthemum/metabolismo , Proteínas de Plantas/química , Serina/química , Agua/química , 8-Bromo Monofosfato de Adenosina Cíclica/metabolismo , Secuencia de Aminoácidos , Animales , Acuaporinas/fisiología , Datos de Secuencia Molecular , Mutagénesis Sitio-Dirigida , Ácido Ocadaico/química , Oocitos/metabolismo , Permeabilidad , Proteínas de Plantas/fisiología , Acetato de Tetradecanoilforbol/química , Xenopus laevis
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