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1.

Prospective derivation of a living organoid biobank of colorectal cancer patients.

van de Wetering, Marc; Francies, Hayley E; Francis, Joshua M; Bounova, Gergana; Iorio, Francesco; Pronk, Apollo; van Houdt, Winan; van Gorp, Joost; Taylor-Weiner, Amaro; Kester, Lennart; McLaren-Douglas, Anne; Blokker, Joyce; Jaksani, Sridevi; Bartfeld, Sina; Volckman, Richard; van Sluis, Peter; Li, Vivian S W; Seepo, Sara; Sekhar Pedamallu, Chandra; Cibulskis, Kristian; Carter, Scott L; McKenna, Aaron; Lawrence, Michael S; Lichtenstein, Lee; Stewart, Chip; Koster, Jan; Versteeg, Rogier; van Oudenaarden, Alexander; Saez-Rodriguez, Julio; Vries, Robert G J; Getz, Gad; Wessels, Lodewyk; Stratton, Michael R; McDermott, Ultan; Meyerson, Matthew; Garnett, Mathew J; Clevers, Hans.

Cell ; 161(4): 933-45, 2015 May 07.

Artículo en Inglés | MEDLINE | ID: mdl-25957691

2.

Hypermutation of the inactive X chromosome is a frequent event in cancer.

Jäger, Natalie; Schlesner, Matthias; Jones, David T W; Raffel, Simon; Mallm, Jan-Philipp; Junge, Kristin M; Weichenhan, Dieter; Bauer, Tobias; Ishaque, Naveed; Kool, Marcel; Northcott, Paul A; Korshunov, Andrey; Drews, Ruben M; Koster, Jan; Versteeg, Rogier; Richter, Julia; Hummel, Michael; Mack, Stephen C; Taylor, Michael D; Witt, Hendrik; Swartman, Benedict; Schulte-Bockholt, Dietrich; Sultan, Marc; Yaspo, Marie-Laure; Lehrach, Hans; Hutter, Barbara; Brors, Benedikt; Wolf, Stephan; Plass, Christoph; Siebert, Reiner; Trumpp, Andreas; Rippe, Karsten; Lehmann, Irina; Lichter, Peter; Pfister, Stefan M; Eils, Roland.

Cell ; 155(3): 567-81, 2013 Oct 24.

Artículo en Inglés | MEDLINE | ID: mdl-24139898

3.

Genome sequencing of pediatric medulloblastoma links catastrophic DNA rearrangements with TP53 mutations.

Rausch, Tobias; Jones, David T W; Zapatka, Marc; Stütz, Adrian M; Zichner, Thomas; Weischenfeldt, Joachim; Jäger, Natalie; Remke, Marc; Shih, David; Northcott, Paul A; Pfaff, Elke; Tica, Jelena; Wang, Qi; Massimi, Luca; Witt, Hendrik; Bender, Sebastian; Pleier, Sabrina; Cin, Huriye; Hawkins, Cynthia; Beck, Christian; von Deimling, Andreas; Hans, Volkmar; Brors, Benedikt; Eils, Roland; Scheurlen, Wolfram; Blake, Jonathon; Benes, Vladimir; Kulozik, Andreas E; Witt, Olaf; Martin, Dianna; Zhang, Cindy; Porat, Rinnat; Merino, Diana M; Wasserman, Jonathan; Jabado, Nada; Fontebasso, Adam; Bullinger, Lars; Rücker, Frank G; Döhner, Konstanze; Döhner, Hartmut; Koster, Jan; Molenaar, Jan J; Versteeg, Rogier; Kool, Marcel; Tabori, Uri; Malkin, David; Korshunov, Andrey; Taylor, Michael D; Lichter, Peter; Pfister, Stefan M.

Cell ; 148(1-2): 59-71, 2012 Jan 20.

Artículo en Inglés | MEDLINE | ID: mdl-22265402

4.

NF1 is a tumor suppressor in neuroblastoma that determines retinoic acid response and disease outcome.

Hölzel, Michael; Huang, Sidong; Koster, Jan; Ora, Ingrid; Lakeman, Arjan; Caron, Huib; Nijkamp, Wouter; Xie, Jing; Callens, Tom; Asgharzadeh, Shahab; Seeger, Robert C; Messiaen, Ludwine; Versteeg, Rogier; Bernards, René.

Cell ; 142(2): 218-29, 2010 Jul 23.

Artículo en Inglés | MEDLINE | ID: mdl-20655465

5.

Recruitment of BRCA1 limits MYCN-driven accumulation of stalled RNA polymerase.

Herold, Steffi; Kalb, Jacqueline; Büchel, Gabriele; Ade, Carsten P; Baluapuri, Apoorva; Xu, Jiajia; Koster, Jan; Solvie, Daniel; Carstensen, Anne; Klotz, Christina; Rodewald, Sabrina; Schülein-Völk, Christina; Dobbelstein, Matthias; Wolf, Elmar; Molenaar, Jan; Versteeg, Rogier; Walz, Susanne; Eilers, Martin.

Nature ; 567(7749): 545-549, 2019 03.

Artículo en Inglés | MEDLINE | ID: mdl-30894746

6.

Defects in 8-oxo-guanine repair pathway cause high frequency of C > A substitutions in neuroblastoma.

van den Boogaard, Marlinde L; Oka, Rurika; Hakkert, Anne; Schild, Linda; Ebus, Marli E; van Gerven, Michael R; Zwijnenburg, Danny A; Molenaar, Piet; Hoyng, Lieke L; Dolman, M Emmy M; Essing, Anke H W; Koopmans, Bianca; Helleday, Thomas; Drost, Jarno; van Boxtel, Ruben; Versteeg, Rogier; Koster, Jan; Molenaar, Jan J.

Proc Natl Acad Sci U S A ; 118(36)2021 09 07.

Artículo en Inglés | MEDLINE | ID: mdl-34479993

7.

Decoding the regulatory landscape of medulloblastoma using DNA methylation sequencing.

Hovestadt, Volker; Jones, David T W; Picelli, Simone; Wang, Wei; Kool, Marcel; Northcott, Paul A; Sultan, Marc; Stachurski, Katharina; Ryzhova, Marina; Warnatz, Hans-Jörg; Ralser, Meryem; Brun, Sonja; Bunt, Jens; Jäger, Natalie; Kleinheinz, Kortine; Erkek, Serap; Weber, Ursula D; Bartholomae, Cynthia C; von Kalle, Christof; Lawerenz, Chris; Eils, Jürgen; Koster, Jan; Versteeg, Rogier; Milde, Till; Witt, Olaf; Schmidt, Sabine; Wolf, Stephan; Pietsch, Torsten; Rutkowski, Stefan; Scheurlen, Wolfram; Taylor, Michael D; Brors, Benedikt; Felsberg, Jörg; Reifenberger, Guido; Borkhardt, Arndt; Lehrach, Hans; Wechsler-Reya, Robert J; Eils, Roland; Yaspo, Marie-Laure; Landgraf, Pablo; Korshunov, Andrey; Zapatka, Marc; Radlwimmer, Bernhard; Pfister, Stefan M; Lichter, Peter.

Nature ; 510(7506): 537-41, 2014 Jun 26.

Artículo en Inglés | MEDLINE | ID: mdl-24847876

8.

Sequencing of neuroblastoma identifies chromothripsis and defects in neuritogenesis genes.

Molenaar, Jan J; Koster, Jan; Zwijnenburg, Danny A; van Sluis, Peter; Valentijn, Linda J; van der Ploeg, Ida; Hamdi, Mohamed; van Nes, Johan; Westerman, Bart A; van Arkel, Jennemiek; Ebus, Marli E; Haneveld, Franciska; Lakeman, Arjan; Schild, Linda; Molenaar, Piet; Stroeken, Peter; van Noesel, Max M; Ora, Ingrid; Santo, Evan E; Caron, Huib N; Westerhout, Ellen M; Versteeg, Rogier.

Nature ; 483(7391): 589-93, 2012 Feb 22.

Artículo en Inglés | MEDLINE | ID: mdl-22367537

9.

The Lgr5 intestinal stem cell signature: robust expression of proposed quiescent '+4' cell markers.

Muñoz, Javier; Stange, Daniel E; Schepers, Arnout G; van de Wetering, Marc; Koo, Bon-Kyoung; Itzkovitz, Shalev; Volckmann, Richard; Kung, Kevin S; Koster, Jan; Radulescu, Sorina; Myant, Kevin; Versteeg, Rogier; Sansom, Owen J; van Es, Johan H; Barker, Nick; van Oudenaarden, Alexander; Mohammed, Shabaz; Heck, Albert J R; Clevers, Hans.

EMBO J ; 31(14): 3079-91, 2012 Jun 12.

Artículo en Inglés | MEDLINE | ID: mdl-22692129

10.

Discovery and visualization of miRNA-mRNA functional modules within integrated data using bicluster analysis.

Bryan, Kenneth; Terrile, Marta; Bray, Isabella M; Domingo-Fernandéz, Raquel; Watters, Karen M; Koster, Jan; Versteeg, Rogier; Stallings, Raymond L.

Nucleic Acids Res ; 42(3): e17, 2014 Feb.

Artículo en Inglés | MEDLINE | ID: mdl-24357407

11.

Individual patient risk stratification of high-risk neuroblastomas using a two-gene score suited for clinical use.

von Stedingk, Kristoffer; De Preter, Katleen; Vandesompele, Jo; Noguera, Rosa; Øra, Ingrid; Koster, Jan; Versteeg, Rogier; Påhlman, Sven; Lindgren, David; Axelson, Håkan.

Int J Cancer ; 137(4): 868-77, 2015 Aug 15.

Artículo en Inglés | MEDLINE | ID: mdl-25652004

12.

MIBG scans in patients with stage 4 neuroblastoma reveal two metastatic patterns, one is associated with MYCN amplification and in MYCN-amplified tumours correlates with a better prognosis.

Bleeker, Gitta; van Eck-Smit, Berthe L; Zwinderman, Koos H; Versteeg, Rogier; van Noesel, Max M; Kam, Boen L; Kaspers, Gertjan J; van Schie, Annelies; Kreissman, Susan G; Yanik, Gregory; Hero, Barbara; Schmidt, Matthias; Laureys, Geneviève; Lambert, Bieke; Øra, Ingrid; Schulte, Johannes H; Caron, Huib N; Tytgat, Godelieve A.

Eur J Nucl Med Mol Imaging ; 42(2): 222-30, 2015 Feb.

Artículo en Inglés | MEDLINE | ID: mdl-25267348

13.

Cancer: Tumours outside the mutation box.

Versteeg, Rogier.

Nature ; 506(7489): 438-9, 2014 Feb 27.

Artículo en Inglés | MEDLINE | ID: mdl-24553138

14.

Functional MYCN signature predicts outcome of neuroblastoma irrespective of MYCN amplification.

Valentijn, Linda J; Koster, Jan; Haneveld, Franciska; Aissa, Rachida Ait; van Sluis, Peter; Broekmans, Marloes E C; Molenaar, Jan J; van Nes, Johan; Versteeg, Rogier.

Proc Natl Acad Sci U S A ; 109(47): 19190-5, 2012 Nov 20.

Artículo en Inglés | MEDLINE | ID: mdl-23091029

15.

Use of Attribute Driven Incremental Discretization and Logic Learning Machine to build a prognostic classifier for neuroblastoma patients.

Cangelosi, Davide; Muselli, Marco; Parodi, Stefano; Blengio, Fabiola; Becherini, Pamela; Versteeg, Rogier; Conte, Massimo; Varesio, Luigi.

BMC Bioinformatics ; 15 Suppl 5: S4, 2014.

Artículo en Inglés | MEDLINE | ID: mdl-25078098

16.

Targeting polo-like kinase 1 by NMS-P937 in osteosarcoma cell lines inhibits tumor cell growth and partially overcomes drug resistance.

Sero, Valeria; Tavanti, Elisa; Vella, Serena; Hattinger, Claudia Maria; Fanelli, Marilù; Michelacci, Francesca; Versteeg, Rogier; Valsasina, Barbara; Gudeman, Beth; Picci, Piero; Serra, Massimo.

Invest New Drugs ; 32(6): 1167-80, 2014 Dec.

Artículo en Inglés | MEDLINE | ID: mdl-25193492

17.

Lack of association between MDM2 promoter SNP309 and clinical outcome in patients with neuroblastoma.

Rihani, Ali; Van Maerken, Tom; De Wilde, Bram; Zeka, Fjoralba; Laureys, Geneviève; Norga, Koen; Tonini, Gian Paolo; Coco, Simona; Versteeg, Rogier; Noguera, Rosa; Schulte, Johannes H; Eggert, Angelika; Stallings, Raymond L; Speleman, Frank; Vandesompele, Jo.

Pediatr Blood Cancer ; 61(10): 1867-70, 2014 Oct.

Artículo en Inglés | MEDLINE | ID: mdl-24391119

18.

Logic Learning Machine creates explicit and stable rules stratifying neuroblastoma patients.

Cangelosi, Davide; Blengio, Fabiola; Versteeg, Rogier; Eggert, Angelika; Garaventa, Alberto; Gambini, Claudio; Conte, Massimo; Eva, Alessandra; Muselli, Marco; Varesio, Luigi.

BMC Bioinformatics ; 14 Suppl 7: S12, 2013.

Artículo en Inglés | MEDLINE | ID: mdl-23815266

19.

ERBB3 is a marker of a ganglioneuroblastoma/ganglioneuroma-like expression profile in neuroblastic tumours.

Wilzén, Annica; Krona, Cecilia; Sveinbjörnsson, Baldur; Kristiansson, Erik; Dalevi, Daniel; Øra, Ingrid; De Preter, Katleen; Stallings, Raymond L; Maris, John; Versteeg, Rogier; Nilsson, Staffan; Kogner, Per; Abel, Frida.

Mol Cancer ; 12(1): 70, 2013 Jul 08.

Artículo en Inglés | MEDLINE | ID: mdl-23835063

20.

OTX2 sustains a bivalent-like state of OTX2-bound promoters in medulloblastoma by maintaining their H3K27me3 levels.

Bunt, Jens; Hasselt, Nancy A; Zwijnenburg, Danny A; Koster, Jan; Versteeg, Rogier; Kool, Marcel.

Acta Neuropathol ; 125(3): 385-94, 2013 Mar.

Artículo en Inglés | MEDLINE | ID: mdl-23179372

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