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1.
Microbiol Resour Announc ; 9(38)2020 Sep 17.
Artículo en Inglés | MEDLINE | ID: mdl-32943555

RESUMEN

We present here the draft genome sequence of a pyridine-degrading bacterium, Micrococcus luteus ATCC 49442, which was reclassified as Pseudarthrobacter sp. strain ATCC 49442 based on its draft genome sequence. Its genome length is 4.98 Mbp, with 64.81% GC content.

2.
Nat Commun ; 11(1): 2458, 2020 05 18.
Artículo en Inglés | MEDLINE | ID: mdl-32424260

RESUMEN

Between the land and ocean, diverse coastal ecosystems transform, store, and transport material. Across these interfaces, the dynamic exchange of energy and matter is driven by hydrological and hydrodynamic processes such as river and groundwater discharge, tides, waves, and storms. These dynamics regulate ecosystem functions and Earth's climate, yet global models lack representation of coastal processes and related feedbacks, impeding their predictions of coastal and global responses to change. Here, we assess existing coastal monitoring networks and regional models, existing challenges in these efforts, and recommend a path towards development of global models that more robustly reflect the coastal interface.

3.
Sci Rep ; 7(1): 8391, 2017 08 21.
Artículo en Inglés | MEDLINE | ID: mdl-28827682

RESUMEN

Microbial electrosynthesis is a renewable energy and chemical production platform that relies on microbial cells to capture electrons from a cathode and fix carbon. Yet despite the promise of this technology, the metabolic capacity of the microbes that inhabit the electrode surface and catalyze electron transfer in these systems remains largely unknown. We assembled thirteen draft genomes from a microbial electrosynthesis system producing primarily acetate from carbon dioxide, and their transcriptional activity was mapped to genomes from cells on the electrode surface and in the supernatant. This allowed us to create a metabolic model of the predominant community members belonging to Acetobacterium, Sulfurospirillum, and Desulfovibrio. According to the model, the Acetobacterium was the primary carbon fixer, and a keystone member of the community. Transcripts of soluble hydrogenases and ferredoxins from Acetobacterium and hydrogenases, formate dehydrogenase, and cytochromes of Desulfovibrio were found in high abundance near the electrode surface. Cytochrome c oxidases of facultative members of the community were highly expressed in the supernatant despite completely sealed reactors and constant flushing with anaerobic gases. These molecular discoveries and metabolic modeling now serve as a foundation for future examination and development of electrosynthetic microbial communities.


Asunto(s)
Acetobacterium/metabolismo , Fuentes de Energía Bioeléctrica/microbiología , Campylobacteraceae/metabolismo , Desulfovibrio/metabolismo , Electricidad , Redes y Vías Metabólicas/genética , Acetatos/metabolismo , Acetobacterium/genética , Campylobacteraceae/genética , Dióxido de Carbono/metabolismo , Desulfovibrio/genética , Electrodos/microbiología , Transporte de Electrón , Perfilación de la Expresión Génica , Genoma Bacteriano
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