Spatial and temporal patterns of phytoplankton community succession and characteristics of realized niches in Lake Taihu, China.

Understanding the dynamics and succession of phytoplankton in large lakes can help inform future lake management. The study analyzed phytoplankton community variations in Lake Taihu over a 21-year period, focusing on realized niches and their impact on succession. The study developed a niche periodic table with 32 niches, revealing responses to environmental factors and the optimal number of niches. Results showed that the phytoplankton in Lake Taihu showed significant spatial and temporal heterogeneity, with biomass decreasing as one moved from the northwest to the southeast and expanding towards central lake area, and towards autumn and winter. Different phytoplankton groups in Lake Taihu occupied realized niches shaped by temperature, nitrate, and phosphate. To predict the response of eutrophic freshwater lake ecosystems to human activities and climate change, it is critical to interpret the law of phytoplankton bloom and niche succession.

Grain size distribution drives microbial communities vertically assemble in nascent lake sediments.

Sediment microbes are crucial for maintaining biogeochemical cycles in aquatic ecosystems, yet the influence of sediment geophysical structure on microbial communities remains unclear. In this study, we collected sediment cores from a nascent reservoir in its initial stage of deposition and utilized the multifractal model to comprehensively characterize the heterogeneity of sediment grain size and pore space. Our results demonstrate that both environmental physiochemistry and microbial community structures varied significantly with depth, with the grain size distribution (GSD) being the key driver of sediment microbial diversity, as revealed by the partial least squares path model (PLS-PM) method. GSD can potentially impact microbial communities and biomass by controlling pore space and organic matter. Overall, this study represents the first attempt to apply soil multifractal models into the integrated description of physical structure in sediment. Our findings provide valuable insights into the vertical distribution of microbial communities.

Microbial community structure and its driving mechanisms in the Hangbu estuary of Chaohu Lake under different sedimentary areas.

Estuaries are known for their high ecological diversity and biological productivity. Sediment microorganisms, as crucial components of estuarine ecosystems, play a pivotal role in reflecting the intricate and dynamic ecological niches. However, our research on microbial community characteristics in estuarine ecosystems under different sedimentary types remains limited. In this study, we collected a total of 27 samples from three sampling sites at Hangbu estuary in Chaohu Lake, and three sedimentary areas were classified based on the overlying water flow conditions and sediment particle properties to elucidate their microbial community structure, environmental drivers, assembly processes, and co-occurrence network characteristics. Our results showed significant differences in microbial community composition and diversity among three sedimentary areas. Redundancy analysis indicated that the differences in microbial community composition at the OTU level among the three sedimentary areas were mainly determined by nitrate-nitrogen, temperature, and water content. Phylogenetic bin-based null model analysis revealed that temperature was a key factor influencing deterministic processes among the three sedimentary areas, while stochastic processes predominantly governed the assembly of microbial communities. In addition, co-occurrence network analysis demonstrated that the network in the hydraulically driven sedimentary area of the lake, consisting mainly of medium and fine silt, had the highest complexity, stability, and cohesion, but was missing potential keystone taxa. The remaining two sedimentary areas had 5 and 8 potential keystone taxa, respectively. Overall, our study proposes the delineation of sedimentary types and comprehensively elucidates the microbial community characteristics under different sedimentary areas, providing a new perspective for studying sediment microbial community structure and helping future scholars systematically study ecological dynamics in estuaries.

The response mechanism of microorganisms to the organic carbon-driven formation of black and odorous water.

The formation of black and odorous water is a complex process influenced by various factors such as organic matter and environmental conditions. However, there are limited studies on the role of microorganisms in water and sediment during the blackening and odorization process. In this study, we investigated the characteristics of black and odorous water formation by simulating organic carbon-driven black and odorous water through indoor experiments. The study revealed that the water turned black and odorous when DOC reached 50 mg/L and the microbial community structure in the water changed significantly during this process, with the relative abundance of Desulfobacterota increasing significantly and Desulfovibrio being the main dominant genus in Desulfobacterota. Additionally, we observed a notable decrease in the α-diversity of the microbial community in water and a considerable increase in microbial function of sulfur compounds respiration in water. In contrast, the sediment microbial community changed slightly, and the main functions of the sediment microbial community remained unchanged. The partial least squares path model (PLS-PM) suggested that organic carbon will drive the blackening and odorization process by affecting DO levels and microbial community structure and that the contribution of Desulfobacterota in water to the formation of black and odorous water was higher than that in sediment. Overall, our study provides insights into the characteristics of black and odorous water formation and suggests potential ways to prevent its formation by controlling DOC and inhibiting the growth of Desulfobacterota in water bodies.

Effects of electrochemical intervention on the remediation of black-odorous water: insights into microbial community dynamics and functional shifts in sediments.

Black-odorous water is a severe environmental issue that has received continuous attention. The major purpose of the present study was to propose an economical, practical, and pollution-free treatment technology. In this study, the in situ remediation of black-odorous water was conducted by applying different voltages (2.5, 5, and 10 V) to improve oxidation conditions of the surface sediments. The study investigated the effects of voltage intervention on water quality, gas emissions, and microbial community dynamics in surface sediments during the remediation process. The results indicated that the voltage intervention can effectively increase the oxidation-reduction potential (ORP) of the surface sediments and inhibit the emissions of H2S, NH3, and CH4. Moreover, the relative abundances of typical methanogens (Methanosarcina and Methanolobus) and sulfate-reducing bacteria (Desulfovirga) decreased because of the increase in ORP after the voltage treatment. The microbial functions predicted by FAPROTAX also demonstrated the inhibition of methanogenesis and sulfate reduction functions. On the contrary, the total relative abundances of chemoheterotrophic microorganisms (e.g., Dechloromonas, Azospira, Azospirillum, and Pannonibacter) in the surface sediments increased significantly, which led to enhanced biochemical degradability of the black-odorous sediments as well as CO2 emissions.

Isolation and characterization of a novel nicotinophilic bacterium, Arthrobacter sp. aRF-1 and its metabolic pathway.

Nicotine is a potent parasympathomimetic stimulant and an important natural alkaloid mainly found in the Nicotiana genus of plants. It can directly threaten ecological security and human health in tobacco waste, wastewater, and other forms of tobacco production. Therefore, it is the basis of nicotine pollution prevention and of great application value to explore efficient and a wide range of nicotinophilic bacteria for tobacco industry and environmental protection. In this study, one nicotinophilic bacterium was isolated from the soil, which accumulated tobacco waste over 50 years at a Hefei cigarette factory. The strain was named aRF-1, which was identified as Arthrobacter sp. by analysis. The nicotine degradation tests showed that the optimum temperature for cell growth and metabolism of nicotine of Arthrobacter sp. aRF-1 was 30 °C, and the optimum initial pH value was about 7.0. Under the optimum experimented conditions, it can tolerance nicotine concentration as high as 8 g·L-1 . The highest removal rate of nicotine was 93.8% in 72 H in nonsterilization contaminated soil by Arthrobacter sp. aRF-1. LC-MS/MS was used to analyze the nicotine metabolic intermediates of strain Arthrobacter sp. aRF-1. A total of nine major metabolites that were detected were able to metabolize nicotine along a variant pathway of pyridine and pyrrolidine, and there may be more than two nicotine metabolic pathways for Arthrobacter sp. aRF-1 through the analysis of the main intermediate products.

Degradation characteristics of polyethylene film by microorganisms from lake sediments.

Polyethylene (PE) exists widely in many habitats as a persistent organic pollution and poses a major threat to the ecological environment. In this study, bacterial communities in freshwater lake sediments were exposed to culture media using PE films as the sole carbon source in aerobic and anaerobic microculture environments, and they were able to adhere and adapt to the PE films for a longer period of time. The results demonstrated that the pH value of the medium in the two cultural conditions was distinct, as were the rates of films weight loss and surface functional group alterations. We also concluded the certain bacterial genera from freshwater lake sediments who may be able to degrade PE films under either aerobic or anaerobic conditions. Simultaneously, the dominating bacterial communities between the medium and the film differed significantly under two cultural settings, as did the community composition, while metabolism was the primary function.

Whether interstitial space features were the main factors affecting sediment microbial community structures in Chaohu Lake.

Sediments cover a majority of Earth's surface and are essential for global biogeochemical cycles. The effects of sediment physiochemical features on microbial community structures have attracted attention in recent years. However, the question of whether the interstitial space has significant effects on microbial community structures in submerged sediments remains unclear. In this study, based on identified OTUs (operational taxonomic units), correlation analysis, RDA analysis, and Permanova analysis were applied into investigating the effects of interstitial space volume, interstitial gas space, volumetric water content, sediment particle features (average size and evenness), and sediment depth on microbial community structures in different sedimentation areas of Chaohu Lake (Anhui Province, China). Our results indicated that sediment depth was the closest one to the main environmental gradient. The destruction effects of gas space on sediment structures can physically affect the similarity of the whole microbial community in all layers in river dominated sedimentation area (where methane emits actively). However, including gas space, none of the five interstitial space parameters were significant with accounting for the microbial community structures in a sediment layer. Thus, except for the happening of active physical destruction on sediment structures (for example, methane ebullition), sediment interstitial space parameters were ineffective for affecting microbial community structures in all sedimentation areas.