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1.
Q Rev Biophys ; 53: e5, 2020 03 02.
Artigo em Inglês | MEDLINE | ID: mdl-32115014

RESUMO

Here it is demonstrated how some anionic food additives commonly used in our diet, such as tartrazine (TZ), bind to DHVAR4, an antimicrobial peptide (AMP) derived from oral host defense peptides, resulting in significantly fostered toxic activity against both Gram-positive and Gram-negative bacteria, but not against mammalian cells. Biophysical studies on the DHVAR4-TZ interaction indicate that initially large, positively charged aggregates are formed, but in the presence of lipid bilayers, they rather associate with the membrane surface. In contrast to synergistic effects observed for mixed antibacterial compounds, this is a principally different mechanism, where TZ directly acts on the membrane-associated AMP promoting its biologically active helical conformation. Model vesicle studies show that compared to dye-free DHVAR4, peptide-TZ complexes are more prone to form H-bonds with the phosphate ester moiety of the bilayer head-group region resulting in more controlled bilayer fusion mechanism and concerted severe cell damage. AMPs are considered as promising compounds to combat formidable antibiotic-resistant bacterial infections; however, we know very little on their in vivo actions, especially on how they interact with other chemical agents. The current example illustrates how food dyes can modulate AMP activity, which is hoped to inspire improved therapies against microbial infections in the alimentary tract. Results also imply that the structure and function of natural AMPs could be manipulated by small compounds, which may also offer a new strategic concept for the future design of peptide-based antimicrobials.


Assuntos
Antibacterianos/química , Membrana Celular/metabolismo , Corantes de Alimentos/química , Histatinas/química , Peptídeos/química , Animais , Transporte Biológico/efeitos dos fármacos , Dicroísmo Circular , Escherichia coli/efeitos dos fármacos , Escherichia coli/metabolismo , Citometria de Fluxo , Células HeLa , Humanos , Bicamadas Lipídicas/química , Testes de Sensibilidade Microbiana , Microscopia de Fluorescência , Monócitos/efeitos dos fármacos , Fosfatos/química , Espectrofotometria , Espectroscopia de Infravermelho com Transformada de Fourier , Streptococcus pneumoniae/efeitos dos fármacos
2.
Phys Chem Chem Phys ; 23(14): 8598-8606, 2021 Apr 14.
Artigo em Inglês | MEDLINE | ID: mdl-33876021

RESUMO

The thermodynamic and structural behaviors of lamellar dimyristoylphosphatidylcholine-alkanol (abbreviation DMPC-CnOH, n = 8-18 is the even number of carbons in the alkyl chain) systems were studied by using DSC and SAXD/WAXD methods at a 0-0.8 CnOH : DMPC molar ratio range. Up to n≤ 10 a significant biphasic effect depending on the main transition temperature tm on the CnOH concentration was observed. Two breakpoints were revealed: turning point (TP), corresponding to the minimum, and threshold concentration (cT), corresponding to the end of the biphasic tendency. These breakpoints were also observed in the alkanol concentration dependent change in the enthalpy of the main transition ΔHm. In the case of CnOHs with n > 10 we propose a marked shift of TP and cT to very low concentrations; consequently, only increase of tm is observed. A partial phase diagram was constructed for a pseudo-binary DMPC-C12OH system. We suggest a fluid-fluid immiscibility of the DMPC-C12OH system above cT with a consequent formation of domains with different C12OH contents. At a constant CnOH concentration, the effects of CnOHs on ΔHm and bilayer repeat distance were found to depend predominantly on the mismatch between CnOH and lipid chain lengths. Observed effects are suggested to be underlined by a counterbalancing effect of interchain van der Waals interactions and headgroup repulsion.

3.
Langmuir ; 34(48): 14652-14660, 2018 12 04.
Artigo em Inglês | MEDLINE | ID: mdl-30395475

RESUMO

Polyelectrolyte (PE)/surfactant (S) mixtures play a distinguished role in the efficacy of shampoos and toiletries primarily due to the deposition of PE/S precipitates on the hair surface upon dilution of the formulations. The classical interpretation of this phenomenon is a simple composition change during which the system enters the two-phase region. Recent studies, however, indicated that the phase properties of PE/S mixtures could be strongly affected by the applied solution preparation protocols. In the present work, we aimed at studying the impact of dilution on the nonequilibrium aggregate formation in the sodium poly(styrenesulfonate) (NaPSS)/dodecyltrimethylammonium bromide (DTAB)/NaCl system. Mixtures prepared with hundredfold dilution of concentrated NaPSS/DTAB/NaCl solutions in water were compared with those ones made by rapid mixing of dilute NaPSS/NaCl and DTAB/NaCl solutions. The study revealed that the phase-separation concentration range as well as the composition, morphology, and visual appearance of the precipitates were remarkably different in the two cases. These observations clearly demonstrate that the dilution/deposition process is also related to the nonequilibrium phase properties of PE/S systems, which can be used to modulate the efficiency of various commercial applications.

5.
Biochim Biophys Acta ; 1857(4): 462-72, 2016 Apr.
Artigo em Inglês | MEDLINE | ID: mdl-26827938

RESUMO

Light-harvesting complex II (LHCII), the major peripheral antenna of Photosystem II in plants, participates in several concerted mechanisms for regulation of the excitation energy and electron fluxes in thylakoid membranes. In part, these include interaction of LHCII with Photosystem I (PSI) enhancing the latter's absorption cross-section - for example in the well-known state 1 - state 2 transitions or as a long-term acclimation to high light. In this work we examined the capability of LHCII to deliver excitations to PSI in reconstituted membranes in vitro. Proteoliposomes with native plant thylakoid membrane lipids and different stoichiometric ratios of LHCII:PSI were reconstituted and studied by steady-state and time-resolved fluorescence spectroscopy. Fluorescence emission from LHCII was strongly decreased in PSI-LHCII membranes due to trapping of excitations by PSI. Kinetic modelling of the time-resolved fluorescence data revealed the existence of separate pools of LHCII distinguished by the time scale of energy transfer. A strongly coupled pool, equivalent to one LHCII trimer per PSI, transferred excitations to PSI with near-unity efficiency on a time scale of less than 10ps but extra LHCIIs also contributed significantly to the effective antenna size of PSI, which could be increased by up to 47% in membranes containing 3 LHCII trimers per PSI. The results demonstrate a remarkable competence of LHCII to increase the absorption cross-section of PSI, given the opportunity that the two types of complexes interact in the membrane.


Assuntos
Complexos de Proteínas Captadores de Luz/química , Complexo de Proteína do Fotossistema I/química , Dicroísmo Circular , Proteolipídeos/química
6.
Biochim Biophys Acta Biomembr ; 1859(3): 459-466, 2017 03.
Artigo em Inglês | MEDLINE | ID: mdl-27989744

RESUMO

Extracellular vesicles isolated by differential centrifugation from Jurkat T-cell line were investigated by attenuated total reflection Fourier-transform infrared spectroscopy (ATR-FTIR). Amide and CH stretching band intensity ratios calculated from IR bands, characteristic of protein and lipid components, proved to be distinctive for the different extracellular vesicle subpopulations. This proposed 'spectroscopic protein-to-lipid ratio', combined with the outlined spectrum-analysis protocol is valid also for low sample concentrations (0.15-0.05mg/ml total protein content) and can carry information about the presence of other non-vesicular formations such as aggregated proteins, lipoproteins and immune complexes. Detailed analysis of IR data reveals compositional changes of extracellular vesicles subpopulations: second derivative spectra suggest changes in protein composition from parent cell towards exosomes favoring proteins with ß-turns and unordered motifs at the expense of intermolecular ß-sheet structures. The IR-based protein-to-lipid assessment protocol was tested also for red blood cell derived microvesicles for which similar values were obtained. The potential applicability of this technique for fast and efficient characterization of vesicular components is high as the investigated samples require no further preparations and all the different molecular species can be determined in the same sample. The results indicate that ATR-FTIR measurements provide a simple and reproducible method for the screening of extracellular vesicle preparations. It is hoped that this sophisticated technique will have further impact in extracellular vesicle research.


Assuntos
Amidas/química , Vesículas Extracelulares/química , Carbono/química , Difusão Dinâmica da Luz , Eritrócitos/citologia , Eritrócitos/metabolismo , Vesículas Extracelulares/metabolismo , Humanos , Hidrogênio/química , Células Jurkat , Microscopia Eletrônica de Transmissão , Espectroscopia de Infravermelho com Transformada de Fourier
7.
J Biol Chem ; 290(8): 4877-4886, 2015 Feb 20.
Artigo em Inglês | MEDLINE | ID: mdl-25525277

RESUMO

Extraction of plant light-harvesting complex II (LHCII) from the native thylakoid membrane or from aggregates by the use of surfactants brings about significant changes in the excitonic circular dichroism (CD) spectrum and fluorescence quantum yield. To elucidate the cause of these changes, e.g. trimer-trimer contacts or surfactant-induced structural perturbations, we compared the CD spectra and fluorescence kinetics of LHCII aggregates, artificial and native LHCII-lipid membranes, and LHCII solubilized in different detergents or trapped in polymer gel. By this means we were able to identify CD spectral changes specific to LHCII-LHCII interactions, at (-)-437 and (+)-484 nm, and changes specific to the interaction with the detergent n-dodecyl-ß-maltoside (ß-DM) or membrane lipids, at (+)-447 and (-)-494 nm. The latter change is attributed to the conformational change of the LHCII-bound carotenoid neoxanthin, by analyzing the CD spectra of neoxanthin-deficient plant thylakoid membranes. The neoxanthin-specific band at (-)-494 nm was not pronounced in LHCII in detergent-free gels or solubilized in the α isomer of DM but was present when LHCII was reconstituted in membranes composed of phosphatidylcholine or plant thylakoid lipids, indicating that the conformation of neoxanthin is sensitive to the molecular environment. Neither the aggregation-specific CD bands, nor the surfactant-specific bands were positively associated with the onset of fluorescence quenching, which could be triggered without invoking such spectral changes. Significant quenching was not active in reconstituted LHCII proteoliposomes, whereas a high degree of energetic connectivity, depending on the lipid:protein ratio, in these membranes allows for efficient light harvesting.


Assuntos
Complexos de Proteínas Captadores de Luz/química , Lipídeos de Membrana/química , Pisum sativum/enzimologia , Tilacoides/enzimologia , Xantofilas/química , Dicroísmo Circular
8.
Biochim Biophys Acta ; 1848(5): 1092-8, 2015 May.
Artigo em Inglês | MEDLINE | ID: mdl-25620772

RESUMO

Effects of ursolic acid on the structural and morphological characteristics of dipalmitoyl lecithin(DPPC)-water system was studied by using differential scanning calorimetry (DSC), small- and wide-angle X-ray scattering (SWAXS), freeze-fracture method combined with transmission electron-microscopy (FF-TEM) and infrared spectroscopy (FT-IR). The surface of the uncorrelated lipid system is rippled or grained and a huge number of small, presumably unilamellar vesicles are present if the UA/DPPC molar ratio is 0.1 mol/mol or higher. Besides the destroyed layer packing of regular multilamellar vesicles, non-bilayer (e.g. cubic or hexagonal) local structures are evidenced by SAXS and FF-TEM methods. The ability of UA to induce non-bilayer structures in hydrated DPPC system originates from the actual geometry form of associated lipid and UA molecules as concluded from the FT-IR measurements and theoretical calculations. Beside numerous beneficial e.g. chemopreventive and chemotherapeutic effect of ursolic acid against cancer, their impact to modify the lipid bilayers can be utilized in liposomal formulations.


Assuntos
1,2-Dipalmitoilfosfatidilcolina/análogos & derivados , Membranas Artificiais , Triterpenos/química , 1,2-Dipalmitoilfosfatidilcolina/química , Varredura Diferencial de Calorimetria , Técnica de Fratura por Congelamento , Lipossomos , Microscopia Eletrônica de Transmissão , Estrutura Molecular , Nanopartículas , Espalhamento a Baixo Ângulo , Espectroscopia de Infravermelho com Transformada de Fourier , Temperatura , Triterpenos/farmacologia , Água/química , Difração de Raios X , Ácido Ursólico
9.
J Biol Chem ; 288(10): 6946-56, 2013 Mar 08.
Artigo em Inglês | MEDLINE | ID: mdl-23293023

RESUMO

Neutrophil extracellular traps are networks of DNA and associated proteins produced by nucleosome release from activated neutrophils in response to infection stimuli and have recently been identified as key mediators between innate immunity, inflammation, and hemostasis. The interaction of DNA and histones with a number of hemostatic factors has been shown to promote clotting and is associated with increased thrombosis, but little is known about the effects of DNA and histones on the regulation of fibrin stability and fibrinolysis. Here we demonstrate that the addition of histone-DNA complexes to fibrin results in thicker fibers (increase in median diameter from 84 to 123 nm according to scanning electron microscopy data) accompanied by improved stability and rigidity (the critical shear stress causing loss of fibrin viscosity increases from 150 to 376 Pa whereas the storage modulus of the gel increases from 62 to 82 pascals according to oscillation rheometric data). The effects of DNA and histones alone are subtle and suggest that histones affect clot structure whereas DNA changes the way clots are lysed. The combination of histones + DNA significantly prolongs clot lysis. Isothermal titration and confocal microscopy studies suggest that histones and DNA bind large fibrin degradation products with 191 and 136 nM dissociation constants, respectively, interactions that inhibit clot lysis. Heparin, which is known to interfere with the formation of neutrophil extracellular traps, appears to prolong lysis time at a concentration favoring ternary histone-DNA-heparin complex formation, and DNase effectively promotes clot lysis in combination with tissue plasminogen activator.


Assuntos
Coagulação Sanguínea , DNA/química , Fibrina/química , Histonas/química , Anticoagulantes/química , Anticoagulantes/metabolismo , Anticoagulantes/farmacologia , DNA/metabolismo , Desoxirribonucleases/metabolismo , Fibrina/metabolismo , Fibrina/ultraestrutura , Fibrinólise/efeitos dos fármacos , Proteínas de Fluorescência Verde/genética , Proteínas de Fluorescência Verde/metabolismo , Heparina/química , Heparina/metabolismo , Heparina/farmacologia , Histonas/metabolismo , Substâncias Macromoleculares/química , Substâncias Macromoleculares/metabolismo , Microscopia Confocal , Microscopia Eletrônica de Varredura , Neutrófilos/metabolismo , Estabilidade Proteica/efeitos dos fármacos , Espalhamento a Baixo Ângulo , Estresse Mecânico , Trombose/sangue , Trombose/metabolismo , Fatores de Tempo , Ativador de Plasminogênio Tecidual/química , Ativador de Plasminogênio Tecidual/genética , Ativador de Plasminogênio Tecidual/metabolismo , Difração de Raios X
10.
Biochim Biophys Acta ; 1828(2): 661-9, 2013 Feb.
Artigo em Inglês | MEDLINE | ID: mdl-23031572

RESUMO

The thermotropic and structural effects of low molecular weight poly(malic acid) (PMLA) on fully hydrated multilamellar dipalmitoylphosphatidylcholine (DPPC)-water systems were investigated using differential scanning calorimetry (DSC), small-angle X-ray scattering (SAXS), and freeze-fracture transmission electron microscopy (FFTEM). Systems of 20wt% DPPC concentration and 1 and 5wt% PMLA to lipid ratios were studied. The PMLA derivatives changed the thermal behavior of DPPC significantly and caused a drastic loss in correlation between lamellae in the three characteristic thermotropic states (i.e., in the gel, rippled gel and liquid crystalline phases). In the presence of PBS or NaCl, the perturbation was more moderate. The structural behavior on the atomic level was revealed by FTIR spectroscopy. The molecular interactions between DPPC and PMLA were simulated via modeling its measured infrared spectra, and their peculiar spectral features were interpreted. Through this interpretation, the poly(malic acid) is inferred to attach to the headgroups of the phospholipids through hydrogen bonds between the free hydroxil groups of PMLA and the phosphodiester groups of DPPC.


Assuntos
1,2-Dipalmitoilfosfatidilcolina/química , Malatos/química , Polímeros/química , Água/química , Bioquímica/métodos , Varredura Diferencial de Calorimetria , Simulação por Computador , Sistemas de Liberação de Medicamentos , Técnica de Fratura por Congelamento , Géis/química , Ligação de Hidrogênio , Microscopia Eletrônica de Transmissão/métodos , Modelos Químicos , Ligação Proteica , Espalhamento de Radiação , Cloreto de Sódio/química , Espectroscopia de Infravermelho com Transformada de Fourier/métodos , Temperatura , Raios X
11.
Biochim Biophys Acta ; 1828(8): 1873-80, 2013 Aug.
Artigo em Inglês | MEDLINE | ID: mdl-23597947

RESUMO

Polyamidoamine (PAMAM) dendrimers are highly charged hyperbranched protein-like polymers that are known to interact with cell membranes. In order to disclose the mechanisms of dendrimer-membrane interaction, we monitored the effect of PAMAM generation five (G5) dendrimer on the membrane permeability of living neuronal cells followed by exploring the underlying structural changes with infrared-visible sum frequency vibrational spectroscopy (SVFS), small angle X-ray scattering (SAXS) and transmission electron microscopy (TEM). G5 dendrimers were demonstrated to irreversibly increase the membrane permeability of neurons that could be blocked in low-[Na(+)], but not in low-[Ca(2+)] media suggesting the formation of specific Na(+) permeable channels. SFVS measurements on silica supported DPPG-DPPC bilayers suggested G5-specific trans-polarization of the membrane. SAXS data and freeze-fracture TEM imaging of self-organized DPPC vesicle systems demonstrated disruption of DPPC vesicle layers by G5 through polar interactions between G5 terminal amino groups and the anionic head groups of DPPC. We propose a nanoscale mechanism by which G5 incorporates into the membrane through multiple polar interactions that disrupt proximate membrane bilayer and shape a unique hydrophilic Na(+) ion permeable channel around the dendrimer. In addition, we tested whether these artificial Na(+) channels can be exploited as antibiotic tools. We showed that G5 quickly arrest the growth of resistant bacterial strains below 10µg/ml concentration, while they show no detrimental effect on red blood cell viability, offering the chance for the development of new generation anti-resistant antibiotics.


Assuntos
Permeabilidade da Membrana Celular/fisiologia , Membrana Celular/metabolismo , Dendrímeros/metabolismo , Hipocampo/metabolismo , Poliaminas/metabolismo , Canais de Sódio/metabolismo , Sódio/metabolismo , Animais , Membrana Celular/química , Sobrevivência Celular , Células Cultivadas , Dendrímeros/química , Eritrócitos/metabolismo , Escherichia coli/metabolismo , Hipocampo/citologia , Bicamadas Lipídicas/química , Bicamadas Lipídicas/metabolismo , Masculino , Microscopia Eletrônica de Transmissão , Neurônios/citologia , Neurônios/metabolismo , Técnicas de Patch-Clamp , Poliaminas/química , Ratos , Ratos Wistar , Sódio/química , Análise Espectral
12.
Eur Biophys J ; 42(2-3): 147-58, 2013 Mar.
Artigo em Inglês | MEDLINE | ID: mdl-23160754

RESUMO

The rate of rotation of the rotor in the yeast vacuolar proton-ATPase (V-ATPase), relative to the stator or steady parts of the enzyme, is estimated in native vacuolar membrane vesicles from Saccharomyces cerevisiae under standardised conditions. Membrane vesicles are formed spontaneously after exposing purified yeast vacuoles to osmotic shock. The fraction of total ATPase activity originating from the V-ATPase is determined by using the potent and specific inhibitor of the enzyme, concanamycin A. Inorganic phosphate liberated from ATP in the vacuolar membrane vesicle system, during ten min of ATPase activity at 20 °C, is assayed spectrophotometrically for different concanamycin A concentrations. A fit of the quadratic binding equation, assuming a single concanamycin A binding site on a monomeric V-ATPase (our data are incompatible with models assuming multiple binding sites), to the inhibitor titration curve determines the concentration of the enzyme. Combining this with the known ATP/rotation stoichiometry of the V-ATPase and the assayed concentration of inorganic phosphate liberated by the V-ATPase, leads to an average rate of ~10 Hz for full 360° rotation (and a range of 6-32 Hz, considering the ± standard deviation of the enzyme concentration), which, from the time-dependence of the activity, extrapolates to ~14 Hz (8-48 Hz) at the beginning of the reaction. These are lower-limit estimates. To our knowledge, this is the first report of the rotation rate in a V-ATPase that is not subjected to genetic or chemical modification and is not fixed to a solid support; instead it is functioning in its native membrane environment.


Assuntos
Membranas Intracelulares/enzimologia , Rotação , Saccharomyces cerevisiae/citologia , Saccharomyces cerevisiae/enzimologia , ATPases Vacuolares Próton-Translocadoras/química , ATPases Vacuolares Próton-Translocadoras/metabolismo , Vacúolos/enzimologia , Biocatálise , Macrolídeos/farmacologia , Modelos Moleculares , Fosfatos/metabolismo , Estrutura Terciária de Proteína , ATPases Vacuolares Próton-Translocadoras/antagonistas & inibidores
13.
J Colloid Interface Sci ; 651: 992-1007, 2023 Dec.
Artigo em Inglês | MEDLINE | ID: mdl-37586154

RESUMO

HYPOTHESIS: In the last 20 years, it has been demonstrated that oppositely charged polyelectrolyte-surfactant (PE-S) mixtures are prone to forming kinetically arrested non-equilibrium aggregates, which are present in the prepared mixtures from rather low surfactant-to-polymer-repeat-unit ratios. Practically, this means that the PE-S mixtures used for the structural investigations of the formed PE-S complexes are typically a mixture of the primary PE-S complexes and large non-equilibrium aggregates of close to charge-neutral complexes. EXPERIMENTS: In this work, we present a unique approach that allows the preparation of PE-S mixtures in the equilibrium one-phase region (surfactant binding ß, is typically below 80%) without forming non-equilibrium aggregates. We used this method to prepare equilibrium, non-aggregated complexes of sodium poly(styrene sulfonate) (NaPSS, Mw = 17 kDa) and dodecyltrimethylammonium bromide (DTAB) (ß = 10 - 70%) both in water and in an inert electrolyte (100 mM NaCl). The evolution of the complex structure was monitored by small-angle X-ray scattering (SAXS) as a function of increasing surfactant binding (ß), and the measured scattering data were fitted by suitable structural models on an absolute scale where concentrations, compositions, and scattering contrasts calculated from molecular properties are used as restraints. FINDINGS: We could show that at low binding (ß < 30%), the system is a mixture of bare polyelectrolyte coils and NaPSS-DTAB complexes containing a closed surfactant associates of low aggregation number wrapped by the polyelectrolyte chain. Once all polymer chains are occupied by a micelle-like surfactant aggregate, the aggregation number increases linearly with increasing surfactant chemical potential. Using the structural insight provided by the SAXS measurements, we could fit the experimental binding isotherm data with a physically coherent, simple thermodynamic model. Finally, we also compared the stoichiometric NaPSS-DTAB precipitate's structure with the equilibrium complexes' structure.

14.
Nanomaterials (Basel) ; 12(3)2022 Jan 25.
Artigo em Inglês | MEDLINE | ID: mdl-35159734

RESUMO

The red-emitting fluorescent properties of bovine serum albumin (BSA)-gold conjugates are commonly attributed to gold nanoclusters formed by metallic and ionized gold atoms, stabilized by the protein. Others argue that red fluorescence originates from gold cation-protein complexes instead, not gold nanoclusters. Our fluorescence and infrared spectroscopy, neutron, and X-ray small-angle scattering measurements show that the fluorescence and structural behavior of BSA-Au conjugates are different in normal and heavy water, strengthening the argument for the existence of loose ionic gold-protein complexes. The quantum yield for red-emitting luminescence is higher in heavy water (3.5%) than normal water (2.4%), emphasizing the impact of hydration effects. Changes in red luminescence are associated with the perturbations of BSA conformations and alterations to interatomic gold-sulfur and gold-oxygen interactions. The relative alignment of domains I and II, II and III, III and IV of BSA, determined from small-angle scattering measurements, indicate a loose ("expanded-like") structure at pH 12 (pD ~12); by contrast, at pH 7 (pD ~7), a more regular formation appears with an increased distance between the I and II domains, suggesting the localization of gold atoms in these regions.

15.
Sci Rep ; 12(1): 977, 2022 01 19.
Artigo em Inglês | MEDLINE | ID: mdl-35046483

RESUMO

Extracellular vesicles (EVs) are released during the storage of red blood cell (RBC) concentrates and might play adverse or beneficial roles throughout the utilization of blood products (transfusion). Knowledge of EV release associated factors and mechanism amends blood product management. In the present work the impact of storage time and medium (blood preserving additive vs isotonic phosphate buffer) on the composition, size, and concentration of EVs was studied using attenuated total reflection infrared (ATR-IR) spectroscopy, microfluidic resistive pulse sensing (MRPS) and freeze-fraction combined transmission electron micrography (FF-TEM). The spectroscopic protein-to-lipid ratio based on amide and the C-H stretching band intensity ratio indicated the formation of various vesicle subpopulations depending on storage conditions. After short storage, nanoparticles with high relative protein content were detected. Spectral analysis also suggested differences in lipid and protein composition, too. The fingerprint region (from 1300 to 1000 cm-1) of the IR spectra furnishes additional information about the biomolecular composition of RBC-derived EVs (REVs) such as adenosine triphosphate (ATP), lactose, glucose, and oxidized hemoglobin. The difference between the vesicle subpopulations reveals the complexity of the REV formation mechanism. IR spectroscopy, as a quick, cost-effective, and label-free technique provides valuable novel biochemical insight and might be used complementary to traditional omics approaches on EVs.


Assuntos
Eritrócitos/química , Vesículas Extracelulares/química , Manejo de Espécimes , Cromatografia em Gel , Eritrócitos/citologia , Voluntários Saudáveis , Humanos , Técnicas Analíticas Microfluídicas , Microscopia Eletrônica de Transmissão , Espectrofotometria Infravermelho
16.
J Thromb Haemost ; 20(12): 2862-2872, 2022 12.
Artigo em Inglês | MEDLINE | ID: mdl-36083779

RESUMO

BACKGROUND: Fibrin, the main scaffold of thrombi, is susceptible to citrullination by PAD (peptidyl arginine deiminase) 4, secreted from neutrophils during the formation of neutrophil extracellular traps. Citrullinated fibrinogen (citFg) has been detected in human plasma as well as in murine venous thrombi, and it decreases the lysability and mechanical resistance of fibrin clots. OBJECTIVE: To investigate the effect of fibrinogen citrullination on the structure of fibrin clots. METHODS: Fibrinogen was citrullinated with PAD4 and clotted with thrombin. Scanning electron microscopy (SEM) and atomic force microscopy (AFM) were used to measure fiber thickness, fiber height/width ratio, and fiber persistence length in clots containing citFg. Fiber density was measured with laser scanning microscopy (LSM) and permeability measurements were carried out to estimate the porosity of the clots. The intra-fiber structure of fibrin was analyzed with small-angle X-ray scattering (SAXS). RESULTS: SEM images revealed a decrease in the median fiber diameter that correlated with the fraction of citFg in the clot, while the fiber width/length ratio remained unchanged according to AFM. With SAXS we observed that citrullination resulted in the formation of denser clots in line with increased fiber density shown by LSM. The permeability constant of citrullinated fibrin decreased more than 3-fold indicating significantly decreased porosity. SAXS also showed largely preserved periodicity in the longitudinal assembly of fibrin monomers. CONCLUSION: The current observations of thin fibers combined with dense packing and low porosity in the presence of citFg can provide a structural framework for the mechanical fragility and lytic resistance of citrullinated fibrin.


Assuntos
Hemostáticos , Trombose , Humanos , Camundongos , Animais , Fibrinogênio/química , Espalhamento a Baixo Ângulo , Difração de Raios X , Fibrina/química , Permeabilidade , Microscopia Eletrônica de Varredura
17.
J Thromb Haemost ; 19(5): 1307-1318, 2021 05.
Artigo em Inglês | MEDLINE | ID: mdl-33609065

RESUMO

BACKGROUND: Neutrophil extracellular traps (NETs) containing DNA and histones are expelled from neutrophils in infection and thrombosis. Heparins, anticoagulant polyanions, can neutralize histones with a potential therapeutic advantage in sepsis. Polyphosphates, procoagulant polyanions, are released by platelets and microorganisms. OBJECTIVES: To characterize the combined effects of NET components and polyanions on clot structure, mechanical properties and lytic susceptibility. METHODS: Scanning electron microscopy, pressure-driven permeation, turbidimetry, and oscillation rheometry were used for the characterization of the structure, viscoelasticity, and kinetics of formation and lysis of fibrin and plasma clots containing histones+/-DNA in combination with unfractionated heparin, its desulfated derivatives, low molecular weight heparin (LMWH), pentasaccharide, and polyphosphates of different sizes. RESULTS: Histones and DNA inhibited fibrin lysis by plasmin, but this behavior was not neutralized by negatively charged heparins or short polyphosphates. Rather, fibrin lysis was further inhibited by added polyanions. Histones inhibited plasma clot lysis by tissue plasminogen activator and the response to added heparin was size dependent. Unfractionated heparin, LMWH, and pentasaccharide had no effect, exacerbated, or reversed histone inhibition, respectively. Histones increased the mechanical strength of fibrin, which was exacerbated by smaller heparin and polyphosphate molecules. Histones increased fibrin diameter and pore size of fibrin clots and this effect was neutralized by all heparin variants but enhanced by polyphosphates. CONCLUSIONS: Despite their common polyanionic character, heparins and polyphosphates exert distinct effects on fibrin mechanical and fibrinolytic stability. Anti-fibrinolytic effects of histones were more often enhanced by polyanions not counteracted. Careful selection of anti-histone strategies is required if they are to be combined with thrombolytic therapy.


Assuntos
Histonas , Trombose , Fibrina/metabolismo , Fibrinólise , Heparina , Heparina de Baixo Peso Molecular , Humanos , Polifosfatos , Trombose/tratamento farmacológico , Ativador de Plasminogênio Tecidual/metabolismo
18.
Cells ; 10(9)2021 09 09.
Artigo em Inglês | MEDLINE | ID: mdl-34572012

RESUMO

In Part I, by using 31P-NMR spectroscopy, we have shown that isolated granum and stroma thylakoid membranes (TMs), in addition to the bilayer, display two isotropic phases and an inverted hexagonal (HII) phase; saturation transfer experiments and selective effects of lipase and thermal treatments have shown that these phases arise from distinct, yet interconnectable structural entities. To obtain information on the functional roles and origin of the different lipid phases, here we performed spectroscopic measurements and inspected the ultrastructure of these TM fragments. Circular dichroism, 77 K fluorescence emission spectroscopy, and variable chlorophyll-a fluorescence measurements revealed only minor lipase- or thermally induced changes in the photosynthetic machinery. Electrochromic absorbance transients showed that the TM fragments were re-sealed, and the vesicles largely retained their impermeabilities after lipase treatments-in line with the low susceptibility of the bilayer against the same treatment, as reflected by our 31P-NMR spectroscopy. Signatures of HII-phase could not be discerned with small-angle X-ray scattering-but traces of HII structures, without long-range order, were found by freeze-fracture electron microscopy (FF-EM) and cryo-electron tomography (CET). EM and CET images also revealed the presence of small vesicles and fusion of membrane particles, which might account for one of the isotropic phases. Interaction of VDE (violaxanthin de-epoxidase, detected by Western blot technique in both membrane fragments) with TM lipids might account for the other isotropic phase. In general, non-bilayer lipids are proposed to play role in the self-assembly of the highly organized yet dynamic TM network in chloroplasts.


Assuntos
Lipídeos/genética , Tilacoides/genética , Dicroísmo Circular/métodos , Espectroscopia de Ressonância Magnética/métodos , Microscopia Eletrônica/métodos , Fotossíntese/genética
19.
Materials (Basel) ; 13(14)2020 Jul 11.
Artigo em Inglês | MEDLINE | ID: mdl-32664525

RESUMO

Silica nanoparticles (SNPs) belong to the most widely produced nanomaterials nowadays. Particle size distribution (PSD) is a key property of SNPs that needs to be accurately determined for a successful application. Many single particle and ensemble characterization methods are available for the determination of the PSD of SNPs, each having different advantages and limitations. Since most preparation protocols for SNPs can yield bimodal or heterogeneous PSDs, the capability of a given method to resolve bimodal PSD is of great importance. In this work, four different methods, namely transmission electron microscopy (TEM), dynamic light scattering (DLS), microfluidic resistive pulse sensing (MRPS) and small-angle X-ray scattering (SAXS) were used to characterize three different, inherently bimodal SNP samples. We found that DLS is unsuitable to resolve bimodal PSDs, while MRPS has proven to be an accurate single-particle size and concentration characterization method, although it is limited to sizes above 50 nm. SAXS was found to be the only method which provided statistically significant description of the bimodal PSDs. However, the analysis of SAXS curves becomes an ill-posed inverse mathematical problem for broad size distributions, therefore the use of orthogonal techniques is required for the reliable description of the PSD of SNPs.

20.
Colloids Surf B Biointerfaces ; 192: 111053, 2020 Apr 19.
Artigo em Inglês | MEDLINE | ID: mdl-32361376

RESUMO

Size characterization of extracellular vesicles (EVs) and drug delivery liposomes is of great importance in their applications in diagnosis and therapy of diseases. There are many different size characterization techniques used in the field, which often report different size values. Besides technological biases, these differences originate from the fact that various methods measure different physical quantities to determine particle size. In this study, the size of synthetic liposomes with nominal diameters of 50nm and 100nm, and red blood cell-derived EVs (REVs) were measured with established optical methods, such as dynamic light scattering (DLS) and nanoparticle tracking analysis (NTA), and with emerging non-optical methods such as microfluidic resistive pulse sensing (MRPS) and very small-angle neutron scattering (VSANS). The comparison of the hydrodynamic sizes obtained by DLS and NTA with the sizes corresponding to the excluded volume of the particles by MRPS enabled the estimation of the thickness of the hydration shell of the particles. The comparison of diameter values corresponding to the boundary of the phospholipid bilayer obtained from VSANS measurements with MRPS size values revealed the thickness of the polyethylene glycol-layer in case of synthetic liposomes, and the thickness of the protein corona in case of REVs.

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