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1.
J Neurophysiol ; 129(1): 115-130, 2023 01 01.
Artigo em Inglês | MEDLINE | ID: mdl-36475897

RESUMO

Real-world search behavior often involves limb movements, either during search or after search. Here we investigated whether movement-related costs influence search behavior in two kinds of search tasks. In our visual search tasks, participants made saccades to find a target object among distractors and then moved a cursor, controlled by the handle of a robotic manipulandum, to the target. In our manual search tasks, participants moved the cursor to perform the search, placing it onto objects to reveal their identity as either a target or a distractor. In all tasks, there were multiple targets. Across experiments, we manipulated either the effort or time costs associated with movement such that these costs varied across the search space. We varied effort by applying different resistive forces to the handle, and we varied time costs by altering the speed of the cursor. Our analysis of cursor and eye movements during manual and visual search, respectively, showed that effort influenced manual search but did not influence visual search. In contrast, time costs influenced both visual and manual search. Our results demonstrate that, in addition to perceptual and cognitive factors, movement-related costs can also influence search behavior.NEW & NOTEWORTHY Numerous studies have investigated the perceptual and cognitive factors that influence decision making about where to look, or move, in search tasks. However, little is known about how search is influenced by movement-related costs associated with acting on an object once it has been visually located or acting during manual search. In this article, we show that movement time costs can bias visual and manual search and that movement effort costs bias manual search.


Assuntos
Movimentos Oculares , Movimento , Humanos , Movimentos Sacádicos , Percepção Visual , Desempenho Psicomotor
2.
Chembiochem ; 24(11): e202300170, 2023 06 01.
Artigo em Inglês | MEDLINE | ID: mdl-37057969

RESUMO

Mass spectrometry-based high-throughput screening methods combine the advantages of photometric or fluorometric assays and analytical chromatography, as they are reasonably fast (throughput ≥1 sample/min) and broadly applicable, with no need for labelled substrates or products. However, the established MS-based screening approaches require specialised and expensive hardware, which limits their broad use throughout the research community. We show that a more common instrumental platform, a single-quadrupole HPLC-MS, can be used to rapidly analyse diverse biotransformations by flow-injection mass spectrometry (FIA-MS), that is, by automated infusion of samples to the ESI-MS detector without prior chromatographic separation. Common organic buffers can be employed as internal standard for quantification, and the method provides readily validated activity and selectivity information with an analytical run time of one minute per sample. We report four application examples that cover a broad range of analyte structures and concentrations (0.1-50 mM before dilution) and diverse biocatalyst preparations (crude cell lysates and whole microbial cells). Our results establish FIA-MS as a versatile and reliable alternative to more traditional methods for screening enzymatic reactions.


Assuntos
Ensaios de Triagem em Larga Escala , Espectrometria de Massas/métodos , Cromatografia Líquida de Alta Pressão/métodos , Ensaios de Triagem em Larga Escala/métodos
3.
Proteins ; 88(12): 1569-1577, 2020 12.
Artigo em Inglês | MEDLINE | ID: mdl-32592192

RESUMO

Supply of iron into human cells is achieved by iron carrier protein transferrin and its receptor that upon complex formation get internalized by endocytosis. Similarly, the iron needs to be delivered into the brain, and necessitates the transport across the blood-brain barrier. While there are still unanswered questions about these mechanisms, extensive efforts have been made to use the system for delivery of therapeutics into biological compartments. The dimeric form of the receptor, where each subunit consists of three domains, further complicates the detailed investigation of molecular determinants responsible for guiding the receptor interactions with other proteins. Especially the apical domain's biological function has been elusive. To further the study of transferrin receptor, we have computationally decoupled the apical domain for soluble expression, and validated the design strategy by structure determination. Besides presenting a methodology for solubilizing domains, the results will allow for study of apical domain's function.


Assuntos
Biologia Computacional/métodos , Conformação Proteica , Engenharia de Proteínas , Domínios e Motivos de Interação entre Proteínas , Receptores da Transferrina/química , Receptores da Transferrina/metabolismo , Humanos
4.
Chem Sci ; 14(36): 9863-9871, 2023 Sep 20.
Artigo em Inglês | MEDLINE | ID: mdl-37736642

RESUMO

Efficient access to the morphinan scaffold remains a major challenge in both synthetic chemistry and biotechnology. Here, a biomimetic chemo-enzymatic strategy to synthesize the natural promorphinan intermediate (+)-salutaridine is demonstrated. By combining early-stage organic synthesis with enzymatic asymmetric key step transformations, the prochiral natural intermediate 1,2-dehydroreticuline was prepared and subsequently stereoselectively reduced by the enzyme 1,2-dehydroreticuline reductase obtaining (R)-reticuline in high ee and yield (>99% ee, up to quant. conversion, 92% isol. yield). In the final step, membrane-bound salutaridine synthase was used to perform the selective ortho-para phenol coupling to give (+)-salutaridine. The synthetic route shows the potential of combining early-stage advanced organic chemistry to minimize protecting group techniques with late-stage multi-step biocatalysis to provide an unprecedented access to the medicinally important compound class of promorphinans.

5.
J Chem Theory Comput ; 15(4): 2535-2547, 2019 Apr 09.
Artigo em Inglês | MEDLINE | ID: mdl-30811198

RESUMO

A thorough analysis of molecular vibrations in the binary system hydrogen chloride/water is presented considering a set of small mixed and pure clusters. In addition to the conventional normal-mode analysis based on the diagonalization of the Hessian, anharmonic frequencies were obtained from the perturbative VPT2 and PT2-VSCF method using hybrid density functional theory. For all normal modes, potential energy curves were modeled by displacing the atoms from the minimum geometry along the normal mode vectors. Three model potentials, a harmonic potential, a Morse potential, and a fourth order polynomial, were applied to fit these curves. From these data, it was possible not only to characterize distinct vibrations as mainly harmonic, anharmonic, or involving higher order terms but also to extract force constants, k, and anharmonicity constants, xe. By investigating all different types of intramolecular vibrations including covalent stretching or bending vibrations and intermolecular vibrations such as librations, we could demonstrate that while vibrational frequencies can be obtained applying scaling factors to harmonic results, useful anharmonicity constants cannot be predicted in such a way and the usage of more elaborate vibrational methods is necessary. For each particular type of molecular vibration, we could however determine a relationship between the wavenumber or wavenumber shift and the anharmonicity constant, which allows us to estimate mode dependent anharmonicity constants for larger clusters in the future.

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