RESUMO
Cell migration is known to be a fundamental biological process, playing an essential role in development, homeostasis, and diseases. This paper introduces a cell tracking algorithm named HFM-Tracker (Hybrid Feature Matching Tracker) that automatically identifies cell migration behaviours in consecutive images. It combines Contour Attention (CA) and Adaptive Confusion Matrix (ACM) modules to accurately capture cell contours in each image and track the dynamic behaviors of migrating cells in the field of view. Cells are firstly located and identified via the CA module-based cell detection network, and then associated and tracked via a cell tracking algorithm employing a hybrid feature-matching strategy. This proposed HFM-Tracker exhibits superiorities in cell detection and tracking, achieving 75% in MOTA (Multiple Object Tracking Accuracy) and 65% in IDF1 (ID F1 score). It provides quantitative analysis of the cell morphology and migration features, which could further help in understanding the complicated and diverse cell migration processes.
Assuntos
Algoritmos , Movimento Celular , Rastreamento de Células , Rastreamento de Células/métodos , Humanos , Processamento de Imagem Assistida por Computador/métodosRESUMO
The microtubule-associated protein tau participates in neurotransmission regulation via its interaction with synaptic vesicles (SVs). The precise nature and mechanics of tau's engagement with SVs, especially regarding alterations in vesicle dynamics, remain a matter of discussion. We report an electrochemical method using a synapse-mimicking nanopipette to monitor vesicle dynamics induced by tau. A model vesicle of ~30â nm is confined within a lipid-modified nanopipette orifice with a comparable diameter to mimic the synaptic lipid environment. Both tau and phosphorylated tau (p-tau) present two-state dynamic behavior in this biomimetic system, showing typical ionic current oscillation, induced by lipid-tau interaction. The results indicate that p-tau has a stronger affinity to the lipid vesicles in the confined environment, blocking the vesicle movement to a higher degree. Taken together, this method bridges a gap for sensing synaptic vesicle dynamics in a confined lipid environment, mimicking vesicle movement near the synaptic membrane. These findings contribute to understanding how different types of tau protein regulate synaptic vesicle motility and to underlying its functional and pathological behaviours in disease.
RESUMO
The precise manipulation of single cells plays a fundamental role for single cell measurement, which is crucial for understanding the diverse cellular mechanisms. Unusual single cell behavior could thus be identified by integrating with advanced analytical methods such as single cell omics, unraveling the intrinsic cellular heterogeneity hidden in ensemble measurements. Herein, this technical note reports a nanopipet-based versatile method for manipulation of an ultrasmall volume of liquid, which further enables the precise manipulation of single cells. Femtoliter volumes of cytoplasm were extracted from single living cells and analyzed by time-of-flight secondary ion mass spectrometry. Moreover, several kinds of exogenous components were injected simultaneously into a cell, offering a delicate tool for multi-imaging in single living cells.
Assuntos
Análise de Célula Única , Espectrometria de Massa de Íon Secundário , Análise de Célula Única/instrumentaçãoRESUMO
Using vermicompost (CV) as raw material, its biochar (CVC350) was prepared at 350â and then their physio-biochemical properties were characterized. Furthermore, adsorption studies were performed in a batch system for removing Pb2+ and Cd2+ ions from solution. The characterization results revealed much higher surface area, smaller pore size, greater aromaticity and nonpolarity of CVC350 as compared to CV. Batch adsorption experiments revealed that both the adsorption of Pb2+ and Cd2+ onto CV or CVC350 fitted Langmuir isotherm model very well, and the maximum adsorption capacity of Pb2+ was in the order of CVC350>CV, but no difference was observed for the adsorption capacity of Cd2+ between CV and CVC350. The desorption studies showed that both CV and CVC350 had much higher adsorption rate for Pb2+ than that for Cd2+, and the Cd2+ adsorbed could be more easily desorbed from CV and CVC350 compared with that for the Pb2+ adsorbed. Both the dynamic adsorption process of Pb2+ onto CV and CVC350 was a rapid process, however, the adsorption process of Cd2+ onto CV and CVC350 could be separated into the first rapid step and the second slower step. The adsorption capacity of Pb2+ or Cd2+ onto CV and CVC350 was only affected by the much lower initial pH of the solution, besides, the adsorption capacity of Cd2+ onto CV and CVC350 was relatively more influenced by the initial pH compared with that of Pb2+. Moreover, FTIR analysis showed that the adsorption of Pb2+ and Cd2+on CV depended on the active sites such as aliphatic alcohol, aliphatic acid,carbonates as well as phosphate while that on CVC350 mainly relied on aromatic alcohol, aromatic acid and carbonates.