Metamodeling approach for efficient estimation of optical properties of turbid media from spatially resolved diffuse reflectance measurements.

A metamodeling approach is introduced and applied to efficiently estimate the bulk optical properties of turbid media from spatially resolved spectroscopy (SRS) measurements. The model has been trained on a set of liquid phantoms covering a wide range of optical properties representative for food and agricultural products and was successfully validated in forward and inverse mode on phantoms not used for training the model. With relative prediction errors of 10% for the estimated bulk optical properties the potential of this metamodeling approach for the estimation of the optical properties of turbid media from spatially resolved spectroscopy measurements has been demonstrated.

Eggshell penetration of various types of hens' eggs by Salmonella enterica serovar Enteritidis.

Egg weight, shell thickness, number of pores, cuticle deposition, eggshell strength (dynamic stiffness and damping ratio), and the ability of Salmonella enterica serovar Enteritidis (SE) to penetrate the eggshell were determined. Penetration was assessed by filling the eggs with a selective medium that allowed viewing of Salmonella growth on the inside of the shell and membrane complex. After inoculation of each shell with on average 2.71 log CFU, the eggs were stored for up to 14 days at 20 degrees C and 60% relative humidity. Commercially available eggs were used. At 14 days of storage, only 6.0% of the eggs from free-range hens and 16.0% of the generic (i.e., eggs from hens in conventional battery cages that were given standard feed) white eggs were penetrated. The generic brown, organic, and omega-3-enriched eggs were penetrated at a frequency of 30 to 34%. In a second experiment it was shown that the layer strains of the hen (ISA-Brown Warren versus Bovans Goldline), which were kept in furnished cages, did not affect eggshell penetration by SE. For Bovans Goldline hens, the housing system (furnished cage versus aviary) did not affect penetration, while a trend was visible toward a higher fraction of penetrated eggshells when hens were fed corncob mix rather than standard feed. Eggshell penetration was observed more frequently in the absence of cuticle spots and for eggs having lower dynamic stiffness values. Shell contamination at the end of storage was highly correlated with SE penetration.

Vibration analysis on incubating eggs and its relation to embryonic development.

Coucke (1998) was the first to use acoustic resonance analysis to monitor embryo development in chicken eggs. He remarked that at around 100 hours of incubation, the course of the resonant frequency and damping changed abruptly in the case of fertile eggs. He also showed that these changes were related to a physiologic event during early embryonic development. The objective of our study is to monitor the course of the vibration parameters during the early incubation of chicken eggs and to relate these changes to egg and embryo characteristics. A total of 72 Hybro eggs were incubated vertically in a small incubator at standard conditions. Several egg parameters were measured before incubation. During the early stages of incubation the vibration behavior of these eggs was monitored. The time at which the damping of the vibration suddenly changed, the diameter of the eggs and their interaction were found to be significant explanatory variables in order to predict hatching time. A correlation coefficient r of 0.72 was obtained.

Statistical models for analyzing repeated quality measurements of horticultural products. Model evaluations and practical example.

In the field of postharvest quality assessment of horticultural products, research on the development of non-destructive quality sensors, replacing destructive and often time consuming sensors, has spurred in the last decennium offering the possibility of taking repeated quality measures on the same product. Repeated measures analysis is gaining importance during recent years and several software packages offer a broad class of routines. A dataset dealing with the postharvest quality evolution of different tomato cultivars serves as practical example for the comparison and discussion of four different statistical model types. Starting from an analysis at each time point and an ordinary least squares regression model as standard and widely used methods, this contribution aims at comparing these two methods to a repeated measures analysis and a longitudinal mixed model. It is shown that the flexibility of such a mixed model, both towards the repeated measures design of the experiments as towards the large product variability inherent to these horticultural products, is an important advantage over classical techniques. This research shows that different conclusions could be drawn depending on which technique is used due to the basic assumptions of each model and which are not always fulfilled. The results further demonstrate the flexibility of the mixed model concept. Using a mixed model for repeated measures, the different sources of variability, being inter-tomato variability, intra-tomato variability and measurement error were characterized being of great benefit to the researcher.

The effect of early prenatal hypercapnia on the vascular network in the chorioallantoic membrane of the chicken embryo.

Over the last decade, the poultry sector has sought to develop novel ways to monitor chicken embryonic growth, health, and quality to control and optimize egg incubation conditions, particularly the concentration of dissolved gases (O(2), CO(2)). One of the parameters, which may change under different gas concentrations, is the angiogenesis in the chorioallantoic membrane (CAM), the organ for gas exchange of the chicken embryo. In this study, a newly developed methodology was used to quantify the angiogenesis in the CAM under normal and early hypercapnic conditions (i.e., increased CO(2) concentrations). Two experiments were conducted in which the same CO(2) profile was applied. The development of the vascular system was monitored from embryonic day (ED) 10 until ED 14 in Experiment 1, and until ED 16 in Experiment 2. This development was characterized by two different parameters-the vascular fraction (VF) as a measure for the density of the vascular network and the fractal dimension (FD) as a measure for the degree of branching of the vascular network. Moreover, in Experiment 2, embryo weights were compared between both groups. The proposed methodology showed that differences in the development of the vascular system could be observed across groups but also as function of the ED. Both VF and FD and the embryo weights were shown to be higher in the hypercapnia group compared to the control group.

The potential of spatially resolved spectroscopy for monitoring angiogenesis in the chorioallantoic membrane.

Over the last decade, the poultry sector has sought to develop ways to monitor chicken embryonic development as to optimize the incubation conditions. One of the parameters of development which may change under different incubation conditions is the angiogenesis in the chorioallantoic membrane (CAM). To be able to quantify these changes in the angiogenesis and detect long-term effects on health, a non-destructive technique is necessary. In this article, the first steps toward such a non-destructive technique are successfully taken. A spatially resolved spectroscopy set-up is built and tested for its potential to measure changes in angiogenesis with incubation time, and differences between a normal and hypercapnic incubation. In this first study, reflectance measurements are performed directly on the CAM as the eggshell considerably complicates the analysis. This issue should be addressed in future research to come to a really non-destructive technique. An experiment was conducted in which one group was incubated under normal conditions, and another under early prenatal hypercapnic conditions (i.e., increased CO(2) concentrations). The angiogenesis in the CAM was measured at embryonic day (ED) 10, 13, and 16. The measurements showed a clear blood spectrum with an increasing amount of blood in time, and significant differences in the reflectance as function of the source-detector distances. However, no significant differences between the hypercapnia and the control group could be detected.

Development of a fast, objective, quantitative methodology to monitor angiogenesis in the chicken chorioallantoic membrane during development.

Recent research investigates the role of different gas concentrations during incubation, on chicken growth, quality and health post hatch. One of the parameters of chicken development which changes under different gas concentrations is angiogenesis in the chorioallantoic membrane (CAM). To be able to perform large incubation experiments under different conditions, angiogenesis in the whole CAM must be quantified objectively and easily. In this paper, a fast, objective, quantitative methodology to assess changes in the overall vascular development in the CAM of chicken embryos is presented. Samples were taken with minimal disturbance by emptying the egg, so that the CAM stayed attached to the shell, which was then cut in pieces. We employed a commercial digital camera and a macro lens set at 5x magnification to take pictures with sufficient contrast and resolution (2.64 mm/pixel). These were processed with computer algorithms to calculate the vascular fraction (VF) and the fractal dimension (FD) automatically on binary images. The ratio of the repeatability and reproducibility variation compared to the parts variation was 0.32 for VF and 0.21 for FD. In a validation experiment (n=284), one group was incubated under hypoxic conditions and the other under normoxic conditions. It was shown that early hypoxia stimulated angiogenesis, while chronic hypoxia impeded growth with significant differences between both groups, which is in accordance with literature data. Thus, we report here a method to asses overall angiogenesis in the CAM under different incubation conditions.

Assessment of embryonic growth in chicken eggs by means of visible transmission spectroscopy.

During this work, it was investigated whether spectral measurements can be used to monitor embryonic growth. An experiment was conducted in which both the transmission spectra and embryonic weight were determined on 240 eggs (Cobb, 37 weeks) between Day 5 and Day 10 of incubation. The spectral data were linked to embryonic weight by means of a partial least squares analysis. Different preprocessing procedures were compared during this work, that is, smoothing, multiplicative scatter correction (MSC), and first- and second-order derivative. Compared to the remainder of the preprocessing procedures, MSC leads to a considerable improvement of the prediction capability of the embryonic weight. The ratio of performance to deviation obtained for the MSC spectra equaled 4.5 indicating that a very accurate prediction of embryonic weight is feasible based on the VIS/NIR transmission measurements. Important regions for the prediction are situated around 685-740 nm. It is suggested that the spectral changes in these spectral regions result from the displacement of carotenoids from the yolk into the blood circuitry.

Front face fluorescence spectroscopy as a tool for the assessment of egg freshness during storage at a temperature of 12.2 degrees C and 87% relative humidity.

The objective of this study was to investigate intrinsic fluorophores of thick albumen and egg yolk in order to assess egg freshness during storage at a temperature of 12.2 degrees C and 87% relative humidity (RH). A total of 126 intact brown-shelled eggs of the same flock (29 weeks of age) were stored for 1, 6, 8, 12, 15, 20, 22, 26, 29, 33, 40, 47 and 55 days. The emission fluorescence spectra of aromatic amino acids and nucleic acids (AAA+NA) (excitation: 250 nm; emission: 280-450 nm), fluorescent Maillard reaction products (FMRP) (excitation: 360 nm; emission: 380-580 nm) and the excitation spectra of vitamin A (emission: 410 nm; excitation: 270-350 nm) were scanned on thick albumen and egg yolk. Among the intrinsic fluorophores, only the principal component analysis (PCA) applied on the vitamin A fluorescence spectra allowed a good identification of eggs as a function of their storage time. Factorial discriminant analysis (FDA) was then applied on the first five principal components (PCs) of the PCA applied on each spectral data set. Regarding AAA+NA recorded on thick albumen, correct classification of 69.4% and 63.9% was observed for the calibration and validation sets, respectively. Quite similar results were obtained on AAA+NA scanned on egg yolks. The best results were obtained with vitamin A fluorescence spectra since 97.7% and 85.7% of the calibration and validation sets was obtained, respectively. These results showed that vitamin A fluorescence spectra provide useful fingerprints, mainly allow the identification of eggs during storage and could be considered as a powerful intrinsic probe for the evaluation of egg freshness.

Common components and specific weights analysis: a tool for monitoring the molecular structure of semi-hard cheese throughout ripening.

Twelve semi-hard (Raclette) cheeses, belonging to four brand products, namely A (n=3), B (n=3), C (n=3) and D (n=3), were produced during summer period and ripened at an industrial scale. Tryptophan, riboflavin and vitamin A fluorescence spectra were scanned on the 12 cheeses at 2, 30 and 60 days of ripening. The physico-chemical analyses were performed only at the end of the ripening stage (60 days). Common components and specific weights analysis (CCSWA) were applied on the four data tables. CCSWA showed that the common component 1 (q1), discriminating cheeses labelled A, B and C from those labelled D, expressed 94.4 and 59% of the inertia of vitamin A and tryptophan fluorescence spectra and a less amount for riboflavin fluorescence spectra and physico-chemical data (24.2 and 13.2%, respectively). Common component 3 (q3), differentiating between cheeses labelled B and those labelled A and C, explained 34.6 and 23.9% of the inertia of the physico-chemical data and tryptophan fluorescence spectra, respectively, and a tiny part of the inertia of riboflavin and vitamin A fluorescence spectra (3.2 and 0.7%, respectively). The CCSWA showed its ability to describe the overall information collected from fluorescence and physico-chemical data tables and to extract relevant information at the molecular level throughout ripening of the investigated semi-hard cheeses.

Embryonic developmental plasticity of the chick: increased CO(2) during early stages of incubation changes the developmental trajectories during prenatal and postnatal growth.

This study investigated the effect of non-ventilation of the incubator during the first 10 days of incubation on carbon dioxide (CO(2)) concentrations in the incubator and its effects on the embryonic and post-hatch development of the chicken (Gallus gallus). Two different incubation conditions were created, one incubator was kept at standard conditions, with adequate ventilation (V) and a second incubator was non-ventilated (NV) during the first ten days of incubation, allowing the CO(2) to rise. After the first 10 days, both incubations were continued under standard conditions. The experiment was repeated twice with different ages of the breeders (45 and 60 wks) which resulted in different CO(2) levels at ED10 (1.5 and 1%). The CO(2) concentration in the V incubators remained below 0.1% in these first 10 days. The eggs of the NV incubation showed higher pCO(2) levels in the air cell from ED10 until ED14 compared to the eggs of the V group. The NV embryos had significantly higher absolute and relative (to egg weight) body weights from ED10 until ED18, pointing to an accelerated embryonic growth. At internal pipping, the NV chick embryos had higher plasma corticosterone and T(3) levels and higher pCO(2) in the air cell. Chicks incubated under NV conditions hatched 10 h earlier in the first and 15 h earlier in the second experiment and the spread of hatch was narrower. During the post-hatch period, the NV chickens had a higher body weight compared to the V chickens. From these results, it is clear that higher levels of CO(2) during the first ten days of incubation have persistent (epigenetic) effects during the incubation and early post-hatch period.