The reduction of selenium(IV) by boreal Pseudomonas sp. strain T5-6-I - Effects on selenium(IV) uptake in Brassica oleracea.

Selenium (Se) is an essential micronutrient but toxic when taken in excessive amounts. Therefore, understanding the metabolic processes related to selenium uptake and bacteria-plant interactions coupled with selenium metabolism are of high importance. We cultivated Brassica oleracea with the previously isolated heterotrophic aerobic Se(IV)-reducing Pseudomonas sp. T5-6-I strain to better understand the phenomena of bacteria-mediated Se(IV) reduction on selenium availability to the plants. B. oleracea grown on Murashige and Skoog medium (MS-salt agar) with and without of Pseudomonas sp. were amended with Se(IV)/75Se(IV), and selenium transfer into plants was studied using autoradiography and gamma spectroscopy. XANES was in addition used to study the speciation of selenium in the B. oleracea plants. In addition, the effects of Se(IV) on the protein expression in B. oleracea was studied using HPLC-SEC. TEM and confocal microscopy were used to follow the bacterial/Se-aggregate accumulation in plants and the effects of bacterial inoculation on root-hair growth. In the tests using 75Se(IV) on average 130% more selenium was translocated to the B. oleracea plants grown with Pseudomonas sp. compared to the plants grown with selenium, but without Pseudomonas sp.. In addition, these bacteria notably increased root hair density. Changes in the protein expression of B. oleracea were observed on the ∼30-58 kDa regions in the Se(IV) treated samples, probably connected e.g. to the oxidative stress induced by Se(IV) or expression of proteins connected to the Se(IV) metabolism. Based on the XANES measurements, selenium appears to accumulate in B. oleracea mainly in organic C-Se-H and C-Se-C bonds with and without bacteria inoculation. We conclude that the Pseudomonas sp. T5-6-I strain seems to contribute positively to the selenium accumulation in plants, establishing the high potential of Se0-producing bacteria in the use of phytoremediation and biofortification of selenium.

Study on the reflectivity properties of spherically bent analyser crystals. Corrigendum.

Corrections to the paper by Honkanen et al. (2014). [J. Synchrotron Rad. 21, 104-110] are made.

Mass-Production of Mesoporous MnCo2 O4 Spinels with Manganese(IV)- and Cobalt(II)-Rich Surfaces for Superior Bifunctional Oxygen Electrocatalysis.

A mesoporous MnCo2 O4 electrode material is made for bifunctional oxygen electrocatalysis. The MnCo2 O4 exhibits both Co3 O4 -like activity for oxygen evolution reaction (OER) and Mn2 O3 -like performance for oxygen reduction reaction (ORR). The potential difference between the ORR and OER of MnCo2 O4 is as low as 0.83 V. By XANES and XPS investigation, the notable activity results from the preferred MnIV - and CoII -rich surface. The electrode material can be obtained on large-scale with the precise chemical control of the components at relatively low temperature. The surface state engineering may open a new avenue to optimize the electrocatalysis performance of electrode materials. The prominent bifunctional activity shows that MnCo2 O4 could be used in metal-air batteries and/or other energy devices.

Study on the reflectivity properties of spherically bent analyser crystals.

Theoretical and experimental studies are presented on properties of spherically bent analyser crystals for high-resolution X-ray spectrometry. A correction to the bent-crystal strain field owing to its finite surface area is derived. The results are used to explain the reflectivity curves and anisotropic properties of Si(660) and Si(553) analysers in near-backscattering geometry. The results from the calculation agree very well with experimental results obtained using an inelastic X-ray scattering synchrotron beamline.

Improving the energy resolution of bent crystal X-ray spectrometers with position-sensitive detectors.

Wavelength-dispersive high-resolution X-ray spectrometers often employ elastically bent crystals for the wavelength analysis. In a preceding paper [Honkanen et al. (2014). J. Synchrotron Rad. 21, 104-110] a theory for quantifying the internal stress of a macroscopically large spherically curved analyser crystal was presented. Here the theory is applied to compensate for the corresponding decrease of the energy resolution. The technique is demonstrated with a Johann-type spectrometer using a spherically bent Si(660) analyser in near-backscattering geometry, where an improvement in the energy resolution from 1.0 eV down to 0.5 eV at 9.7 keV incident photon energy was observed.

Monochromatic computed tomography using laboratory-scale setup.

In this article, we demonstrate the viability of highly monochromatic full-field X-ray absorption near edge structure based tomography using a laboratory-scale Johann-type X-ray absorption spectrometer utilising a conventional X-ray tube source. In this proof-of-concept, by using a phantom embedded with elemental Se, Na[Formula: see text]SeO[Formula: see text], and Na[Formula: see text]SeO[Formula: see text], we show that the three-dimensional distributions of Se in different oxidation states can be mapped and distinguished from the phantom matrix and each other with absorption edge contrast tomography. The presented method allows for volumetric analyses of chemical speciation in mm-scale samples using low-brilliance X-ray sources, and represents a new analytic tool for materials engineering and research in many fields including biology and chemistry.

Quality assurance framework for rapid automatic analysis deployment in medical imaging.

PURPOSE: Automatic image analysis algorithms have an increasing role in clinical quality assurance (QA) in medical imaging. Although the implementation of QA calculation algorithms may be straightforward at the development level, actual deployment of a new method to clinical routine may require substantial additional effort from supporting services. We sought to develop a multimodal system that enables rapid implementation of new QA analysis methods in clinical practice. METHODS: The QA system was built using freely available open-source software libraries. The included features were results database, database interface, interactive user interface, e-mail error dispatcher, data processing backend, and DICOM server. An in-house database interface was built, providing the developers of analyses with simple access to the results database. An open-source DICOM server was used for image traffic and automatic initiation of modality-specific QA image analyses. RESULTS: The QA framework enabled rapid adaptation of new analysis methods to automatic image processing workflows. The system provided online data review via an easily accessible user interface. In case of deviations, the system supported simultaneous review of the results for the user and QA expert to trigger corrective actions. In particular, embedded error thresholds, trend analyses, and error-feedback channels were provided to facilitate continuous monitoring and to enable pre-emptive corrective actions. CONCLUSION: An effective and novel QA framework incorporating easy adaptation and scalability to automated image analysis methods was developed. The framework provides an efficient and responsive web-based tool to manage the normal operation, trends, errors, and abnormalities in medical image quality.

General method to calculate the elastic deformation and X-ray diffraction properties of bent crystal wafers.

Toroidally and spherically bent single crystals are widely employed as optical elements in hard X-ray spectrometry at synchrotron and free-electron laser light sources, and in laboratory-scale instruments. To achieve optimal spectrometer performance, a solid theoretical understanding of the diffraction properties of such crystals is essential. In this work, a general method to calculate the internal stress and strain fields of toroidally bent crystals and how to apply it to predict their diffraction properties is presented. Solutions are derived and discussed for circular and rectangular spherically bent wafers due to their prevalence in contemporary instrumentation.

Johann-type laboratory-scale x-ray absorption spectrometer with versatile detection modes.

We present a low-cost laboratory X-ray absorption spectrometer that uses a conventional X-ray tube source and bent Johann-type crystal monochromators. The instrument is designed for X-ray absorption spectroscopy studies in the 4-20 keV range which covers most K edges of 3d transition metals and L edges of 5d transition metals and actinides. The energy resolution is typically in the range of 1-5 eV at 10 keV depending on the crystal analyser and the Bragg angle. Measurements can be performed in transmission, fluorescence, and imaging modes. Due to its simple and modular design, the spectrometer can be modified to accommodate additional equipment and complex sample environments required for in situ studies. A showcase of various applications is presented.

Comprehensive study to design advanced metal-carbide@garaphene and metal-carbide@iron oxide nanoparticles with tunable structure by the laser ablation in liquid.

Core-shell nanoparticles represent a class of materials that exhibit a variety of properties. By rationally tuning the cores and the shells in such nanoparticles (NPs), a range of materials with tailorable properties can be produced which are of interest for a wide variety of applications. Herein, experimental and theoretical approaches have been combined to show the structural transformation of NPs resulting to the formation of either NiFexCy encapsulated in ultra-thin graphene layer (NiFe@UTG) or Ni3C/FexCy@FeOx NPs with the universal one-step pulse laser ablation in liquid (PLAL) method. Analysis suggests that carbon in Ni3C is the source for the carbon shell formation, whereas the final carbon-shell thickness in the NPs originates from the difference between Ni3C and FexCy phases stability at room temperature. The ternary Ni-Fe-C phase diagram calculations reveal the competition between carbon solubility in the studied metals (Ni and Fe) and their tendency toward oxidation as the key properties to produce controlled core-shell NP materials. As an application example, the electrocatalytic hydrogen evolution current on the different NPs is measured. The electrochemical analysis of the NPs reveals that NiFe@UTG has the best performance amongst the NPs in this study in both alkaline and acidic media.

Defect-Driven Enhancement of Electrochemical Oxygen Evolution on Fe-Co-Al Ternary Hydroxides.

Efficient, abundant and low-cost catalysts for the oxygen evolution reaction (OER) are required for energy conversion and storage. In this study, a doping-etching route has been developed to access defect rich Fe-Co-Al (Fe-Co-Al-AE) ternary hydroxide nanosheets for superior electrochemical oxygen evolution. After partial etching of Al, ultrathin Fe3 Co2 Al2 -AE electrocatalysts with a rich pore structure are obtained with a shift of the cobalt valence state towards higher valence (Co2+ →Co3+ ), along with a substantial improvement in the catalytic performance. Fe3 Co2 Al2 -AE shows a notably lower overpotential of only 284 mV at a current density of 10 mA cm-2 and double the OER mass activity of the etching-free Fe3 Co2 Al2 with an overpotential of 350 mV. Density functional theory shows the leaching of Al changes the rate-determining step of the OER from conversion of *OOH into O2 on Fe3 Co2 Al2 to formation of OOH from *O on the Al-defective catalysts. This work demonstrates an effective route to design and synthesize transition metal electrocatalysts and provides a promising alternative for the further development of oxygen evolution catalysts.

In-situ X-Ray Absorption Near Edge Structure Spectroscopy of a Solid Catalyst using a Laboratory-Based Set-up.

An in-situ laboratory-based X-ray Absorption Near Edge Structure (XANES) Spectroscopy set-up is presented, which allows performing long-term experiments on a solid catalyst at relevant reaction conditions of temperature and pressure. Complementary to research performed at synchrotron radiation facilities the approach is showcased for a Co/TiO2 Fischer-Tropsch Synthesis (FTS) catalyst. Supported cobalt metal nanoparticles next to a (very small) fraction of cobalt(II) titanate, which is an inactive phase for FTS, were detected, with no signs of re-oxidation of the supported cobalt metal nanoparticles during FTS at 523 K, 5 bar and 200 h, indicating that cobalt metal is maintained as the main active phase during FTS.

Resonant X-ray emission with a standing wave excitation.

The Borrmann effect is the anomalous transmission of x-rays in perfect crystals under diffraction conditions. It arises from the interference of the incident and diffracted waves, which creates a standing wave with nodes at strongly absorbing atoms. Dipolar absorption of x-rays is thus diminished, which makes the crystal nearly transparent for certain x-ray wave vectors. Indeed, a relative enhancement of electric quadrupole absorption via the Borrmann effect has been demonstrated recently. Here we show that the Borrmann effect has a significantly larger impact on resonant x-ray emission than is observable in x-ray absorption. Emission from a dipole forbidden intermediate state may even dominate the corresponding x-ray spectra. Our work extends the domain of x-ray standing wave methods to resonant x-ray emission spectroscopy and provides means for novel spectroscopic experiments in d- and f-electron systems.