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1.
Magn Reson Med ; 92(3): 1232-1247, 2024 Sep.
Artigo em Inglês | MEDLINE | ID: mdl-38748852

RESUMO

PURPOSE: We present SCAMPI (Sparsity Constrained Application of deep Magnetic resonance Priors for Image reconstruction), an untrained deep Neural Network for MRI reconstruction without previous training on datasets. It expands the Deep Image Prior approach with a multidomain, sparsity-enforcing loss function to achieve higher image quality at a faster convergence speed than previously reported methods. METHODS: Two-dimensional MRI data from the FastMRI dataset with Cartesian undersampling in phase-encoding direction were reconstructed for different acceleration rates for single coil and multicoil data. RESULTS: The performance of our architecture was compared to state-of-the-art Compressed Sensing methods and ConvDecoder, another untrained Neural Network for two-dimensional MRI reconstruction. SCAMPI outperforms these by better reducing undersampling artifacts and yielding lower error metrics in multicoil imaging. In comparison to ConvDecoder, the U-Net architecture combined with an elaborated loss-function allows for much faster convergence at higher image quality. SCAMPI can reconstruct multicoil data without explicit knowledge of coil sensitivity profiles. Moreover, it is a novel tool for reconstructing undersampled single coil k-space data. CONCLUSION: Our approach avoids overfitting to dataset features, that can occur in Neural Networks trained on databases, because the network parameters are tuned only on the reconstruction data. It allows better results and faster reconstruction than the baseline untrained Neural Network approach.


Assuntos
Algoritmos , Processamento de Imagem Assistida por Computador , Imageamento por Ressonância Magnética , Redes Neurais de Computação , Imageamento por Ressonância Magnética/métodos , Humanos , Processamento de Imagem Assistida por Computador/métodos , Artefatos , Encéfalo/diagnóstico por imagem , Compressão de Dados/métodos
2.
Magn Reson Med ; 89(2): 812-827, 2023 02.
Artigo em Inglês | MEDLINE | ID: mdl-36226661

RESUMO

PURPOSE: To evaluate an iterative learning approach for enhanced performance of robust artificial-neural-networks for k-space interpolation (RAKI), when only a limited amount of training data (auto-calibration signals [ACS]) are available for accelerated standard 2D imaging. METHODS: In a first step, the RAKI model was tailored for the case of limited training data amount. In the iterative learning approach (termed iterative RAKI [iRAKI]), the tailored RAKI model is initially trained using original and augmented ACS obtained from a linear parallel imaging reconstruction. Subsequently, the RAKI convolution filters are refined iteratively using original and augmented ACS extracted from the previous RAKI reconstruction. Evaluation was carried out on 200 retrospectively undersampled in vivo datasets from the fastMRI neuro database with different contrast settings. RESULTS: For limited training data (18 and 22 ACS lines for R = 4 and R = 5, respectively), iRAKI outperforms standard RAKI by reducing residual artifacts and yields better noise suppression when compared to standard parallel imaging, underlined by quantitative reconstruction quality metrics. Additionally, iRAKI shows better performance than both GRAPPA and standard RAKI in case of pre-scan calibration with varying contrast between training- and undersampled data. CONCLUSION: RAKI benefits from the iterative learning approach, which preserves the noise suppression feature, but requires less original training data for the accurate reconstruction of standard 2D images thereby improving net acceleration.


Assuntos
Processamento de Imagem Assistida por Computador , Imageamento por Ressonância Magnética , Processamento de Imagem Assistida por Computador/métodos , Imageamento por Ressonância Magnética/métodos , Algoritmos , Estudos Retrospectivos , Redes Neurais de Computação
3.
New Phytol ; 238(5): 1775-1794, 2023 06.
Artigo em Inglês | MEDLINE | ID: mdl-36895109

RESUMO

Imaging has long supported our ability to understand the inner life of plants, their development, and response to a dynamic environment. While optical microscopy remains the core tool for imaging, a suite of novel technologies is now beginning to make a significant contribution to visualize plant metabolism. The purpose of this review was to provide the scientific community with an overview of current imaging methods, which rely variously on either nuclear magnetic resonance (NMR), mass spectrometry (MS) or infrared (IR) spectroscopy, and to present some examples of their application in order to illustrate their utility. In addition to providing a description of the basic principles underlying these technologies, the review discusses their various advantages and limitations, reveals the current state of the art, and suggests their potential application to experimental practice. Finally, a view is presented as to how the technologies will likely develop, how these developments may encourage the formulation of novel experimental strategies, and how the enormous potential of these technologies can contribute to progress in plant science.


Assuntos
Imageamento por Ressonância Magnética , Espectroscopia de Ressonância Magnética/métodos , Espectrometria de Massas
4.
Magn Reson Med ; 85(5): 2771-2780, 2021 05.
Artigo em Inglês | MEDLINE | ID: mdl-33166009

RESUMO

PURPOSE: Accurate and artifact-free T1ρ quantification is still a major challenge due to a susceptibility of the spin-locking module to B0 and/or B1 field inhomogeneities. In this study, we present a novel spin-lock preparation module (B-SL) that enables an almost full compensation of both types of inhomogeneities. METHODS: The new B-SL module contains a second 180° refocusing pulse to compensate each pulse in the preparation block by a corresponding pulse with opposite phase. For evaluation and validation of B-SL, extensive simulations as well as phantom measurements were performed. Furthermore, the new module was compared to three common established compensation methods. RESULTS: Both simulations and measurements demonstrate a much lower susceptibility to artifacts for the B-SL module, therefore providing an improved accuracy in T1ρ quantification. In the presence of field inhomogeneities, measurements revealed an increased banding compensation by 79% compared with the frequently used composite module. The goodness of the mono-exponential T1ρ fitting procedure was improved by 58%. CONCLUSION: The B-SL preparation enables the generation of accurate relaxation maps with significantly reduced artifacts, even in the case of large field imperfections. Therefore, the B-SL module is suggested to be highly beneficial for in vivo T1ρ quantification.


Assuntos
Imageamento por Ressonância Magnética , Imagens de Fantasmas
5.
Magn Reson Med ; 81(3): 1714-1725, 2019 03.
Artigo em Inglês | MEDLINE | ID: mdl-30417940

RESUMO

PURPOSE: Cardiac T1 mapping has become an increasingly important imaging technique, contributing novel diagnostic options. However, currently utilized methods are often associated with accuracy problems because of heart rate variations and cardiac arrhythmia, limiting their value in clinical routine. This study aimed to introduce an improved arrhythmia-related robust T1 mapping sequence called RT-TRASSI (real-time Triggered RAdial Single-Shot Inversion recovery). METHODS: All measurements were performed on a 3.0T whole-body imaging system. A real-time feedback algorithm for arrhythmia detection was implemented into the previously described pulse sequence. A programmable motion phantom was constructed and measurements with different simulated arrhythmias arranged. T1 mapping accuracy and susceptibility to artifacts were analyzed. In addition, in vivo measurements and comparisons with 3 prevailing T1 mapping sequences (MOLLI, ShMOLLI, and SASHA) were carried out to investigate the occurrence of artifacts. RESULTS: In the motion phantom measurements, RT-TRASSI showed excellent agreement with predetermined reference T1 values. Percentage scattering of the T1 values ranged from -0.6% to +1.9% in sinus rhythm and -1.0% to +3.1% for high-grade arrhythmias. In vivo, RT-TRASSI showed diagnostic image quality with only 6% of the acquired T1 maps including image artifacts. In contrast, more than 40% of the T1 maps acquired with MOLLI, ShMOLLI, or SASHA included motion artifacts. CONCLUSION: Accuracy issues because of heart rate variability and arrhythmia are a prevailing problem in current cardiac T1 mapping techniques. With RT-TRASSI, artifacts can be minimized because of the short acquisition time and effective real-time feedback, avoiding potential data acquisition during systolic heart phase.


Assuntos
Arritmias Cardíacas/diagnóstico por imagem , Coração/diagnóstico por imagem , Processamento de Imagem Assistida por Computador/métodos , Imageamento por Ressonância Magnética , Adulto , Idoso , Algoritmos , Artefatos , Feminino , Voluntários Saudáveis , Frequência Cardíaca , Humanos , Interpretação de Imagem Assistida por Computador/métodos , Masculino , Movimento (Física) , Imagens de Fantasmas , Reprodutibilidade dos Testes
6.
Magn Reson Med ; 81(6): 3488-3502, 2019 06.
Artigo em Inglês | MEDLINE | ID: mdl-30687949

RESUMO

PURPOSE: To improve the reconstruction quality for quantitative T1 and T2 measurements using the inversion recovery (IR) TrueFISP sequence and to demonstrate the potential for multicomponent analysis. METHODS: The iterative reconstruction method takes advantage of the high redundancy in the smooth exponential signals using principle component analysis (PCA). Multicomponent information is preserved and allows voxel-by-voxel computation of relaxation time spectra with an inverse Laplace transform. Off-resonance effects are analytically and numerically investigated and a correction approach is presented. RESULTS: Single-shot IR TrueFISP in vivo measurements on healthy volunteers demonstrate the improved reconstruction performance compared to a view sharing (k-space weighted image contrast [KWIC]) reconstruction. Especially, tissue components with short apparent relaxation times T1 * are not filtered out and can be identified in the relaxation time spectra. These components include myelin in the human brain (T1 * ≈ 130 ms) and extra cranial subcutaneous fat. CONCLUSION: The PCA-based reconstruction method improves the temporal accuracy and preserves multicomponent information. Spatially resolved relaxation time spectra can be obtained and allow the identification of tissue types with short, apparent relaxation times.


Assuntos
Processamento de Imagem Assistida por Computador/métodos , Imageamento por Ressonância Magnética/métodos , Algoritmos , Encéfalo/diagnóstico por imagem , Química Encefálica/fisiologia , Humanos , Bainha de Mielina/química , Imagens de Fantasmas , Análise de Componente Principal
7.
MAGMA ; 32(1): 63-77, 2019 Feb.
Artigo em Inglês | MEDLINE | ID: mdl-30604144

RESUMO

OBJECTIVE: In magnetic resonance imaging (MRI), compressed sensing (CS) enables the reconstruction of undersampled sparse data sets. Thus, partial acquisition of the underlying k-space data is sufficient, which significantly reduces measurement time. While 19F MRI data sets are spatially sparse, they often suffer from low SNR. This can lead to artifacts in CS reconstructions that reduce the image quality. We present a method to improve the image quality of undersampled, reconstructed CS data sets. MATERIALS AND METHODS: Two resampling strategies in combination with CS reconstructions are presented. Numerical simulations are performed for low-SNR spatially sparse data obtained from 19F chemical-shift imaging measurements. Different parameter settings for undersampling factors and SNR values are tested and the error is quantified in terms of the root-mean-square error. RESULTS: An improvement in overall image quality compared to conventional CS reconstructions was observed for both strategies. Specifically spike artifacts in the background were suppressed, while the changes in signal pixels remained small. DISCUSSION: The proposed methods improve the quality of CS reconstructions. Furthermore, because resampling is applied during post-processing, no additional measurement time is required. This allows easy incorporation into existing protocols and application to already measured data.


Assuntos
Biologia Computacional/métodos , Compressão de Dados/métodos , Imagem por Ressonância Magnética de Flúor-19 , Flúor/química , Algoritmos , Animais , Artefatos , Simulação por Computador , Humanos , Interpretação de Imagem Assistida por Computador/métodos , Processamento de Imagem Assistida por Computador/métodos , Imageamento Tridimensional , Camundongos , Modelos Teóricos , Distribuição Normal , Imagens de Fantasmas , Razão Sinal-Ruído
8.
Magn Reson Med ; 77(2): 787-793, 2017 02.
Artigo em Inglês | MEDLINE | ID: mdl-26968124

RESUMO

PURPOSE: To demonstrate that desynchronization between Cartesian k-space sampling and periodic motion in free-breathing lung MRI improves the robustness and efficiency of retrospective respiratory self-gating. METHODS: Desynchronization was accomplished by reordering the phase (ky ) and partition (kz ) encoding of a three-dimensional FLASH sequence according to two-dimensional, quasi-random (QR) numbers. For retrospective respiratory self-gating, the k-space center signal (DC signal) was acquired separately after each encoded k-space line. QR sampling results in a uniform distribution of k-space lines after gating. Missing lines resulting from the gating process were reconstructed using iterative GRAPPA. Volunteer measurements were performed to compare quasi-random with conventional sampling. Patient measurements were performed to demonstrate the feasibility of QR sampling in a clinical setting. RESULTS: The uniformly sampled k-space after retrospective gating allows for a more stable iterative GRAPPA reconstruction and improved ghost artifact reduction compared with conventional sampling. It is shown that this stability can either be used to reduce the total scan time or to reconstruct artifact-free data sets in different respiratory phases, both resulting in an improved efficiency of retrospective respiratory self-gating. CONCLUSION: QR sampling leads to desynchronization between repeated data acquisition and periodic respiratory motion. This results in an improved motion artifact reduction in shorter scan time. Magn Reson Med 77:787-793, 2017. © 2016 International Society for Magnetic Resonance in Medicine.


Assuntos
Imageamento Tridimensional/métodos , Imageamento por Ressonância Magnética/métodos , Técnicas de Imagem de Sincronização Respiratória/métodos , Adulto , Algoritmos , Artefatos , Feminino , Humanos , Pulmão/diagnóstico por imagem , Masculino , Movimento/fisiologia
9.
New Phytol ; 216(4): 1181-1190, 2017 Dec.
Artigo em Inglês | MEDLINE | ID: mdl-28800167

RESUMO

Germination, the process whereby a dry, quiescent seed springs to life, has been a focus of plant biologist for many years, yet the early events following water uptake, during which metabolism of the embryo is restarted, remain enigmatic. Here, the nature of the cues required for this restarting in oilseed rape (Brassica napus) seed has been investigated. A holistic in vivo approach was designed to display the link between the entry and allocation of water, metabolic events and structural changes occurring during germination. For this, we combined functional magnetic resonance imaging with Fourier transform infrared microscopy, fluorescence-based respiration mapping, computer-aided seed modeling and biochemical tools. We uncovered an endospermal lipid gap, which channels water to the radicle tip, from whence it is distributed via embryonic vasculature toward cotyledon tissues. The resumption of respiration is initiated first in the endosperm, only later spreading to the embryo. Sugar metabolism and lipid utilization are linked to the spatiotemporal sequence of tissue rehydration. Together, this imaging study provides insights into the spatial aspects of key events in oilseed rape seeds leading to germination. It demonstrates how seed architecture predetermines the pattern of water intake, which sets the stage for the orchestrated restart of life.


Assuntos
Brassica napus/fisiologia , Germinação , Sementes/fisiologia , Carbono/metabolismo , Endosperma/fisiologia , Metabolismo dos Lipídeos , Imageamento por Ressonância Magnética , Consumo de Oxigênio , Água/fisiologia
10.
Magn Reson Med ; 75(3): 1086-99, 2016 Mar.
Artigo em Inglês | MEDLINE | ID: mdl-25845973

RESUMO

PURPOSE: Phase-constrained parallel MRI approaches have the potential for significantly improving the image quality of accelerated MRI scans. The purpose of this study was to investigate the properties of two different phase-constrained parallel MRI formulations, namely the standard phase-constrained approach and the virtual conjugate coil (VCC) concept utilizing conjugate k-space symmetry. METHODS: Both formulations were combined with image-domain algorithms (SENSE) and a mathematical analysis was performed. Furthermore, the VCC concept was combined with k-space algorithms (GRAPPA and ESPIRiT) for image reconstruction. In vivo experiments were conducted to illustrate analogies and differences between the individual methods. Furthermore, a simple method of improving the signal-to-noise ratio by modifying the sampling scheme was implemented. RESULTS: For SENSE, the VCC concept was mathematically equivalent to the standard phase-constrained formulation and therefore yielded identical results. In conjunction with k-space algorithms, the VCC concept provided more robust results when only a limited amount of calibration data were available. Additionally, VCC-GRAPPA reconstructed images provided spatial phase information with full resolution. CONCLUSIONS: Although both phase-constrained parallel MRI formulations are very similar conceptually, there exist important differences between image-domain and k-space domain reconstructions regarding the calibration robustness and the availability of high-resolution phase information.


Assuntos
Algoritmos , Processamento de Imagem Assistida por Computador/métodos , Imageamento por Ressonância Magnética/métodos , Processamento de Sinais Assistido por Computador , Imageamento por Ressonância Magnética/instrumentação
11.
Magn Reson Med ; 75(1): 217-26, 2016 Jan.
Artigo em Inglês | MEDLINE | ID: mdl-25684374

RESUMO

PURPOSE: To investigate the benefit of a two-channel transmit system on shading close to total hip replacements and other elongated metal structures in parallel to the magnet bore. METHODS: An analytical model comprising a water cylinder and a metal rod is introduced to describe the B1 effects close to elongated metal structures and it is verified. The dependence of the optimal polarization, which induces minimum shading, on the position of the metal is analyzed. Furthermore, the optimal polarization for two patients is determined both on the basis of the model and experimentally and its benefit compared with circular polarization is investigated. RESULTS: The cylindrical model approximates the modification of the B1 field due to the metal well, and the optimal polarization strongly depends on the position of the rod. In vivo, shading can be ameliorated by the use of the optimal polarization; for total hip replacements with shafts of titanium, this polarization can be determined on the basis of both the analytical model and the experimental data. CONCLUSION: Parallel transmission offers the possibility of a substantial reduction of shading close to long metal structures in parallel to the magnet bore.


Assuntos
Artefatos , Articulação do Quadril/patologia , Prótese de Quadril , Aumento da Imagem/métodos , Interpretação de Imagem Assistida por Computador/métodos , Imageamento por Ressonância Magnética/métodos , Algoritmos , Humanos , Imageamento por Ressonância Magnética/instrumentação , Imagens de Fantasmas , Reprodutibilidade dos Testes , Sensibilidade e Especificidade
12.
Magn Reson Med ; 76(6): 1887-1894, 2016 12.
Artigo em Inglês | MEDLINE | ID: mdl-26743137

RESUMO

PURPOSE: An algorithm is presented to enable cardiac and respiratory self-gating in combination with Inversion Recovery Look-Locker read-outs. METHODS: A radial inversion recovery snapshot FLASH sequence was adapted for retrospective cardiac T1 measurements in mice. Cardiac and respiratory data were extracted from the k-space center of radial projections and an adapted method for retrospective cardiac synchronization is introduced. Electrocardiogram (ECG) data was acquired concurrently for validation of the proposed self-gating technique. T1 maps generated by the proposed technique were compared with maps reconstructed with the ECG reference. RESULTS: Respiratory gating and cardiac trigger points could be obtained for the whole time course of the relaxation dynamic and correlate very well to the ECG signal. T1 maps reconstructed with the self-gating technique are in very good agreement with maps reconstructed with the external reference. CONCLUSION: The proposed method extends "wireless" cardiac MRI to non-steady-state inversion recovery measurements. T1 maps were generated with a quality comparable to ECG based reconstructions. As the method does not rely on an ECG trigger signal it provides easier animal handling. Magn Reson Med 76:1887-1894, 2016. © 2016 International Society for Magnetic Resonance in Medicine.


Assuntos
Artefatos , Técnicas de Imagem de Sincronização Cardíaca/métodos , Aumento da Imagem/métodos , Imagem Cinética por Ressonância Magnética/métodos , Infarto do Miocárdio/diagnóstico por imagem , Técnicas de Imagem de Sincronização Respiratória/métodos , Algoritmos , Animais , Feminino , Interpretação de Imagem Assistida por Computador/métodos , Masculino , Camundongos , Camundongos Endogâmicos C57BL , Reprodutibilidade dos Testes , Sensibilidade e Especificidade , Processamento de Sinais Assistido por Computador
13.
Plant Physiol ; 169(3): 1698-713, 2015 Nov.
Artigo em Inglês | MEDLINE | ID: mdl-26395842

RESUMO

Here, we have characterized the spatial heterogeneity of the cereal grain's metabolism and demonstrated how, by integrating a distinct set of metabolic strategies, the grain has evolved to become an almost perfect entity for carbon storage. In vivo imaging revealed light-induced cycles in assimilate supply toward the ear/grain of barley (Hordeum vulgare) and wheat (Triticum aestivum). In silico modeling predicted that, in the two grain storage organs (the endosperm and embryo), the light-induced shift in solute influx does cause adjustment in metabolic flux without changes in pathway utilization patterns. The enveloping, leaf-like pericarp, in contrast, shows major shifts in flux distribution (starch metabolism, photosynthesis, remobilization, and tricarboxylic acid cycle activity) allow to refix 79% of the CO2 released by the endosperm and embryo, allowing the grain to achieve an extraordinary high carbon conversion efficiency of 95%. Shading experiments demonstrated that ears are autonomously able to raise the influx of solutes in response to light, but with little effect on the steady-state levels of metabolites or transcripts or on the pattern of sugar distribution within the grain. The finding suggests the presence of a mechanism(s) able to ensure metabolic homeostasis in the face of short-term environmental fluctuation. The proposed multicomponent modeling approach is informative for predicting the metabolic effects of either an altered level of incident light or a momentary change in the supply of sucrose. It is therefore of potential value for assessing the impact of either breeding and/or biotechnological interventions aimed at increasing grain yield.


Assuntos
Carbono/metabolismo , Grão Comestível/metabolismo , Hordeum/metabolismo , Triticum/metabolismo , Metabolismo dos Carboidratos , Grão Comestível/citologia , Grão Comestível/genética , Grão Comestível/efeitos da radiação , Hordeum/citologia , Hordeum/genética , Hordeum/efeitos da radiação , Luz , Análise do Fluxo Metabólico , Fotossíntese , Folhas de Planta/citologia , Folhas de Planta/genética , Folhas de Planta/metabolismo , Folhas de Planta/efeitos da radiação , Amido/metabolismo , Triticum/citologia , Triticum/genética , Triticum/efeitos da radiação
14.
Plant Cell ; 25(5): 1625-40, 2013 May.
Artigo em Inglês | MEDLINE | ID: mdl-23709628

RESUMO

Constrained to develop within the seed, the plant embryo must adapt its shape and size to fit the space available. Here, we demonstrate how this adjustment shapes metabolism of photosynthetic embryo. Noninvasive NMR-based imaging of the developing oilseed rape (Brassica napus) seed illustrates that, following embryo bending, gradients in lipid concentration became established. These were correlated with the local photosynthetic electron transport rate and the accumulation of storage products. Experimentally induced changes in embryo morphology and/or light supply altered these gradients and were accompanied by alterations in both proteome and metabolome. Tissue-specific metabolic models predicted that the outer cotyledon and hypocotyl/radicle generate the bulk of plastidic reductant/ATP via photosynthesis, while the inner cotyledon, being enclosed by the outer cotyledon, is forced to grow essentially heterotrophically. Under field-relevant high-light conditions, major contribution of the ribulose-1,5-bisphosphate carboxylase/oxygenase-bypass to seed storage metabolism is predicted for the outer cotyledon and the hypocotyl/radicle only. Differences between in vitro- versus in planta-grown embryos suggest that metabolic heterogeneity of embryo is not observable by in vitro approaches. We conclude that in vivo metabolic fluxes are locally regulated and connected to seed architecture, driving the embryo toward an efficient use of available light and space.


Assuntos
Brassica napus/metabolismo , Cotilédone/metabolismo , Fotossíntese , Sementes/metabolismo , Brassica napus/anatomia & histologia , Brassica napus/crescimento & desenvolvimento , Cotilédone/anatomia & histologia , Cotilédone/crescimento & desenvolvimento , Transporte de Elétrons , Eletroforese em Gel Bidimensional , Metabolismo dos Lipídeos , Imageamento por Ressonância Magnética , Espectrometria de Massas , Metaboloma , Metabolômica/métodos , Modelos Anatômicos , Modelos Biológicos , Proteínas de Plantas/metabolismo , Proteoma/metabolismo , Proteômica/métodos , Ribulosefosfatos/metabolismo , Sementes/anatomia & histologia , Sementes/crescimento & desenvolvimento
15.
J Magn Reson Imaging ; 44(3): 745-57, 2016 09.
Artigo em Inglês | MEDLINE | ID: mdl-26919224

RESUMO

PURPOSE: To present a technique, which allows for the in vivo quantification of the spectral line broadening of the human lung in a single breathhold. The line broadening is an interesting parameter of the lung because it can provide information about important lung properties, namely: inflation and oxygen uptake. The proposed technique integrates the asymmetric spin-echo (ASE) approach, which is commonly used to quantify the line broadening, with a single shot turbo spin-echo pulse sequence with half-Fourier acquisition (HASTE), to reduce the acquisition times. MATERIALS AND METHODS: Imaging experiments were performed at 1.5 Tesla on 14 healthy volunteers, using a ASE-prepared HASTE sequence. The line broadening was quantified using a two-points method. Data were acquired at different breathing states: functional residual capacity (FRC) and total lung capacity (TLC), and with different breathing gases: room-air and pure-oxygen. Image acquisition was accomplished within a single breathhold of approximately 15 s duration. The violation of the Carr-Purcell-Meiboom-Gill conditions, deriving from inhomogeneities of the static magnetic field, was overcome by means of radiofrequency-phase cycling and generalized autocalibrating partially parallel acquisitions (GRAPPA) reconstruction. RESULTS: Significant increase of the line broadening was observed with both lung inflation and oxygen concentration (P < 0.0001). Values of the line broadening obtained within the lung parenchyma at different breathing states (1.48 ± 0.29 ppm at FRC and 1.95 ± 0.43 ppm at TLC) are in agreement with previous reports and show excellent reproducibility, with a coefficient of variation <0.03. The mean relative difference observed with oxygen-enhancement was approximately 14%. CONCLUSION: The presented technique offers a robust way to quantify the spectral line broadening of the human lung in vivo. Image acquisition can be accomplished in a single breathhold, which could be suitable for clinical applications on patients with lung diseases. J. Magn. Reson. Imaging 2016;44:745-757.


Assuntos
Suspensão da Respiração , Interpretação de Imagem Assistida por Computador/métodos , Pulmão/diagnóstico por imagem , Pulmão/fisiologia , Imageamento por Ressonância Magnética/métodos , Testes de Função Respiratória/métodos , Processamento de Sinais Assistido por Computador , Adulto , Algoritmos , Feminino , Humanos , Aumento da Imagem/métodos , Pulmão/anatomia & histologia , Masculino , Reprodutibilidade dos Testes , Sensibilidade e Especificidade , Adulto Jovem
16.
MAGMA ; 29(4): 691-8, 2016 Aug.
Artigo em Inglês | MEDLINE | ID: mdl-26861046

RESUMO

OBJECTIVE: In this work, a prototype of an effective electromagnet with a field-of-view (FoV) of 140 mm for neonatal head imaging is presented. The efficient implementation succeeded by exploiting the use of steel plates as a housing system. We achieved a compromise between large sample volumes, high homogeneity, high B0 field, low power consumption, light weight, simple fabrication, and conserved mobility without the necessity of a dedicated water cooling system. MATERIALS AND METHODS: The entire magnetic resonance imaging (MRI) system (electromagnet, gradient system, transmit/receive coil, control system) is introduced and its unique features discussed. Furthermore, simulations using a numerical optimization algorithm for magnet and gradient system are presented. RESULTS: Functionality and quality of this low-field scanner operating at 23 mT (generated with 500 W) is illustrated using spin-echo imaging (in-plane resolution 1.6 mm × 1.6 mm, slice thickness 5 mm, and signal-to-noise ratio (SNR) of 23 with a acquisition time of 29 min). B0 field-mapping measurements are presented to characterize the homogeneity of the magnet, and the B0 field limitations of 80 mT of the system are fully discussed. CONCLUSION: The cryogen-free system presented here demonstrates that this electromagnet with a ferromagnetic housing can be optimized for MRI with an enhanced and homogeneous magnetic field. It offers an alternative to prepolarized MRI designs in both readout field strength and power use. There are multiple indications for the clinical medical application of such low-field devices.


Assuntos
Cabeça/diagnóstico por imagem , Imageamento por Ressonância Magnética/métodos , Imãs , Algoritmos , Ananas , Simulação por Computador , Desenho de Equipamento , Humanos , Recém-Nascido , Campos Magnéticos , Magnetismo , Razão Sinal-Ruído , Aço
17.
Radiology ; 274(3): 879-87, 2015 Mar.
Artigo em Inglês | MEDLINE | ID: mdl-25393945

RESUMO

PURPOSE: To develop and validate a fast cardiac magnetic resonance imaging T1 mapping technique with high spatial resolution based on a radial inversion-recovery (IR) spoiled gradient-echo acquisition. MATERIALS AND METHODS: Approval for the study was granted by the local institutional review board, and all subjects gave written informed consent. An electrocardiographically triggered radial single-shot IR (TRASSI) sequence was developed in conjunction with a custom-written fitting algorithm. The proposed imaging technique was validated in phantom measurements and then used for cardiac T1 mapping in 62 subjects with or without cardiac disease. The study population included 51 healthy subjects, three patients with arrhythmia, and eight patients with myocardial infarction. The potential heart rate dependency of the TRASSI method was tested by using linear regression analysis. Statistically significant differences between the sexes and various section orientations were analyzed with a Student t test for independent groups and a repeated-measures analysis of variance for dependent groups. RESULTS: High-spatial-resolution T1 maps (1.17 × 1.17 mm) without motion artifacts and without heart rate dependency (slope = -0.0303, R(2) = 0.0000887, P = .899) were acquired with an acquisition time of less than 6 seconds in all subjects. The mean T1 of healthy left ventricular myocardium across all examined subjects was 1031 msec ± 33 (standard deviation). Testing for reproducibility in three individuals with 34 repetitive measurements revealed a mean standard deviation of 4.1 msec (0.412%). Subacute and chronic myocardial infarction could be detected in all eight patients. T1 disturbances due to arrhythmia proved to be minimal in three patients (standard deviation, <1.2%). CONCLUSION: Fast and accurate cardiac T1 mapping is feasible within a single-shot IR experiment.


Assuntos
Arritmias Cardíacas/diagnóstico , Técnicas de Imagem Cardíaca/métodos , Eletrocardiografia , Processamento de Imagem Assistida por Computador , Imageamento por Ressonância Magnética/métodos , Infarto do Miocárdio/diagnóstico , Adulto , Idoso , Feminino , Humanos , Masculino , Pessoa de Meia-Idade , Adulto Jovem
18.
Plant Biotechnol J ; 13(2): 188-99, 2015 Feb.
Artigo em Inglês | MEDLINE | ID: mdl-25201084

RESUMO

The large numbers of samples processed in breeding and biodiversity programmes require the development of efficient methods for the nondestructive evaluation of basic seed properties. Near-infrared spectroscopy is the state-of-the-art solution for this analytical demand, but it also has some limitations. Here, we present a novel, rapid, accurate procedure based on time domain-nuclear magnetic resonance (TD-NMR), designed to simultaneously quantify a number of basic seed traits without any seed destruction. Using a low-field, benchtop (1) H-NMR instrument, the procedure gives a high-accuracy measurement of oil content (R(2) = 0.98), carbohydrate content (R(2) = 0.99), water content (R(2) = 0.98) and both fresh and dry weight of seeds/grains (R(2) = 0.99). The method requires a minimum of ~20 mg biomass per sample and thus enables to screen individual, intact seeds. When combined with an automated sample delivery system, a throughput of ~1400 samples per day is achievable. The procedure has been trialled as a proof of concept on cereal grains (collection of ~3000 accessions of Avena spp. curated at the IPK genebank). A mathematical multitrait selection approach has been designed to simplify the selection of outlying (most contrasting) accessions. To provide deeper insights into storage oil topology, some oat accessions were further analysed by three-dimensional seed modelling and lipid imaging. We conclude that the novel TD-NMR-based screening tool opens perspectives for breeding and plant biology in general.


Assuntos
Avena/genética , Ensaios de Triagem em Larga Escala/métodos , Característica Quantitativa Herdável , Sementes/genética , Avena/crescimento & desenvolvimento , Calibragem , Espectroscopia de Ressonância Magnética , Tamanho do Órgão , Óleos de Plantas/metabolismo , Fatores de Tempo
19.
Magn Reson Med ; 73(1): 182-94, 2015 Jan.
Artigo em Inglês | MEDLINE | ID: mdl-24478187

RESUMO

PURPOSE: Balanced steady-state free precession (bSSFP) imaging suffers from banding artifacts due to its inherent sensitivity to inhomogeneities in the main magnetic field. These artifacts can be removed by the acquisition of multiple images at different frequency offsets. However, conventional phase-cycling is hindered by a long scan time. The purpose of this work is to present a novel approach for efficient banding removal in bSSFP imaging. THEORY AND METHODS: To this end, the phase-cycle during a single-shot radial acquisition of an image was dynamically changed. Thus, each projection is acquired with a different frequency offset. Using conventional radial gridding, an artifact-free image can be reconstructed out of this dataset. RESULTS: The approach is validated at clinical field strength [3.0 Tesla (T)] as well as at ultrahigh field (9.4T). Robust elimination of banding artifacts was obtained for different imaging regions, including brain imaging at ultrahigh field with an in-plane resolution of 0.25 × 0.25 mm(2). Besides banding artifact-free imaging, the applicability of the proposed technique for fat-water separation is demonstrated. CONCLUSION: Dynamically phase-cycled radial bSSFP has the potential for banding-free bSSFP imaging in a short scan time, in the presence of severe field inhomogeneities and at high resolution.


Assuntos
Artefatos , Encéfalo/anatomia & histologia , Aumento da Imagem/métodos , Interpretação de Imagem Assistida por Computador/métodos , Imageamento por Ressonância Magnética/métodos , Processamento de Sinais Assistido por Computador , Algoritmos , Humanos , Reprodutibilidade dos Testes , Sensibilidade e Especificidade
20.
Magn Reson Med ; 73(6): 2129-41, 2015 Jun.
Artigo em Inglês | MEDLINE | ID: mdl-24975241

RESUMO

PURPOSE: Recently, the (Resolution Enhanced-) T1 insensitive steady-state imaging (TOSSI) approach has been proposed for the fast acquisition of T2 -weighted images. This has been achieved by balanced steady-state free precession (bSSFP) imaging between unequally spaced inversion pulses. The purpose of this work is to present an extension of this technique, considerably increasing both the efficiency and possibilities of TOSSI. THEORY AND METHODS: A radial trajectory in combination with an appropriate view-sharing reconstruction is used. Because each projection traverses the contrast defining k-space center, several different contrasts can be extracted from a single-shot measurement. These contrasts include various T2 -weightings and T2 /T1 -weighting if an even number of inversion pulses is used, while an odd number allow the generation of several images with predefined tissue types cancelled. RESULTS: The approach is validated for brain and abdominal imaging at 3.0 Tesla. Results are compared with RE-TOSSI, bSSFP, and turbo spin-echo images and are shown to provide similar contrasts in a fraction of scan time. Furthermore, the potential utility of the approach is illustrated by images obtained from a brain tumor patient. CONCLUSION: Radial T1 sensitive and insensitive steady-state imaging is able to generate multiple contrasts out of one single-shot measurement in a short scan time.


Assuntos
Abdome/patologia , Astrocitoma/patologia , Neoplasias Encefálicas/patologia , Imageamento por Ressonância Magnética/métodos , Artefatos , Simulação por Computador , Humanos , Interpretação de Imagem Assistida por Computador/métodos , Sensibilidade e Especificidade , Razão Sinal-Ruído
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