Ultrafast excited state relaxation dynamics of pyran-based D-π-A systems: solvent polarity controls the triplet state.

The excited state relaxation dynamics of V-shaped D-π-A systems having 4H-pyranylidene appended barbituric acid as an acceptor and diphenylamine (TPAPBA) and diethyl amine (EAPBA) as donors were investigated using steady-state and time-resolved spectroscopy along with theoretical optimization. The steady-state photophysical characterization exhibited the bathochromic shift of the emission maximum (∼6400 cm-1) and large change in the dipole moment (∼24D) with an increase of solvent polarity, reflecting the occurrence of the intramolecular charge transfer state (ICT) in the excited state. The nanosecond and femtosecond transient absorption spectra of these derivatives in a non-polar solvent, toluene, reveal that the excited state relaxation pathway involving a local excited state (LE) decayed to ICT followed by the formation of a twisted ICT state by conformational relaxation, finally leading to the triplet state. The lack of observation of a triplet state in the polar solvent, acetonitrile, signifies that the relaxation dynamics of V-shaped triads in the excited state are influenced by the polarity of the solvent.

Molecular torsion controls the excited state relaxation pathways of multibranched tetraphenylpyrazines: effect of substitution of morpholine vs. phenoxazine.

Multibranched donor-acceptor derivatives exhibiting desirable photophysical properties are efficiently used in optoelectronic devices, in which the excited state relaxation dynamics of the derivatives control the efficiency of the devices. Here, the effect of intramolecular torsion on the excited state relaxation dynamics of tetraphenylpyrazine (TPP) derivatives in non-polar (toluene) and polar (THF) solvents is investigated by substituting the electron donor of morpholine (TPP-4MOP) and phenoxazine (TPP-4PHO) leading to the planar and twisted configurations, respectively, using femtosecond and nanosecond transient absorption spectroscopy. In the steady state, TPP-4MOP showed feeble emission (ΦF ∼0.03) due to the weak donor by the delocalization of electron density supported by theoretical optimization. The TPP-4PHO exhibited strong emission (ΦF ∼0.18) in toluene compared to that in THF, in which it showed a large Stokes shift (∼9691 cm-1) with low fluorescence quantum yield (ΦF ∼0.01). The observation of large Stokes shifts, inherent nature and theoretical calculations of TPP-4PHO suggest the twisting of the dihedral angle between tetraphenylpyrazine and phenoxazine in the excited state leading to the twisted intramolecular charge transfer state (TICT). The femtosecond and nanosecond transient absorption and picosecond time-resolved emission spectra of TPP-4PHO revealed the signature of the existence of both the partial TICT and TICT states in THF leading to the triplet state. Whereas in the case of TPP-4MOP, the transient absorption spectra showed the formation of the triplet state from the local excited state without the involvement of the TICT state. Aggregation studies of TPP-4PHO in a THF and water mixture reflect the elimination of the TICT state by the restriction of intramolecular torsion in the aggregates leading to an increase of 12-fold of the fluorescence intensity along with shifting of the maximum towards the blue region. These studies revealed that the excited state relaxation pathways of the derivatives are controlled by polarity-dependent torsional motion.

Amplified Spontaneous Emission from Zwitterionic Excited-State Intramolecular Proton Transfer.

The unique four-level photocycle characteristics of excited-state intramolecular proton transfer (ESIPT) materials enable population inversion and large spectral separation between absorption and emission through their respective enol and keto forms. This leads to minimal or no self-absorption losses, a favorable feature in acting as an optical gain medium. While conventional ESIPT materials with an enol-keto tautomerism process are widely known, zwitterionic ESIPT materials, particularly those with high photoluminescence, are scarce. Facilitated by the synthesis and characterization of a new family of 2-hydroxyphenyl benzothiazole (HBT) with fluorene substituents, HBT-Fl1 and HBT-Fl2, we herein report the first efficient zwitterionic ESIPT lasing material (HBT-Fl2). The zwitterionic ESIPT HBT-Fl2 not only shows a remarkably low solid-state amplified spontaneous emission (ASE) threshold of 5.3 µJ/cm2 with an ASE peak at 609 nm but also exhibits high ASE photostability. Coupled with its substantially large Stokes shift (≈236 nm ≈10,390 cm-1) and an extremely small overlap of excited-state absorption with ASE emission, comprehensive density functional theory (DFT) and time-dependent DFT studies reveal the zwitterionic characteristics of HBT-Fl2. In opposition to conventional ESIPT with π-delocalized tautomerism as observed in analogue HBT-Fl1 and parent HBT, HBT-Fl2 instead shows charge redistribution in the proton transfer through the fluorene conjugation. This structural motif provides a design tactic in the innovation of new zwitterionic ESIPT materials for efficient light amplification in red and longer-wavelength emission.

Direct evidence of solvent polarity governing the intramolecular charge and energy transfer: ultrafast relaxation dynamics of push-pull fluorene derivatives.

Photoinduced charge and energy transfer are significant photophysical processes controlling the efficiency of photosynthesis and molecular electronics. Here, the influence of solvent polarity and excitation wavelength on the dynamics of excited state relaxation pathways of a push-pull chromophore (PXFCN), where phenoxazine and cyano fluorene acted as a donor and an acceptor, respectively, is investigated in detail by using steady state spectroscopy, nanosecond and femtosecond transient absorption spectroscopy and picosecond emission spectroscopy. In acetonitrile (ACN), the steady state emission spectra of PXFCN exhibited three maxima at around 330, 405 and 620 nm covering the complete continuum range (CIE coordinates of 0.32, 0.40) with an absolute quantum yield of ≈0.12. The aggregation induced emission with an increased quantum yield of ≈0.32 was observed in a tetrahydrofuran and water mixture due to the formation of nano-aggregates. Interestingly the steady state and time resolved emission spectra of PXFCN in ACN obtained upon excitation at different wavelengths revealed the presence of both intramolecular charge and energy transfer processes, whereas in cyclohexane (CHX) the emission originated mainly from the local excited state revealing efficient intramolecular energy transfer. The femtosecond transient absorption spectrum in the polar solvent, ACN, shows that the excited state relaxation pathway is controlled by solvent stabilized twisted intramolecular charge transfer dynamics limiting the formation of the triplet state. However in the case of CHX, the charge transfer state formed upon photoexcitation decayed to the triplet state by geminate charge recombination. The nanosecond transient absorption spectra manifest the dominant feature of the triplet state and the charge transfer state in CHX and ACN, respectively, and their complete dynamics were obtained. Thus based on the transient absorption and emission spectra, it is inferred that the intramolecular charge transfer occurring along with the energy transfer is controlled by the polarity of the solvent through conformational changes leading to a favourable position yielding the charge and energy transfer between the donor and acceptor moieties.

NO Releasing and Anticancer Properties of Octahedral Ruthenium-Nitrosyl Complexes with Equatorial 1 H-Indazole Ligands.

With the aim of enhancing the biological activity of ruthenium-nitrosyl complexes, new compounds with four equatorially bound indazole ligands, namely, trans-[RuCl(Hind)4(NO)]Cl2·H2O ([3]Cl2·H2O) and trans-[RuOH(Hind)4(NO)]Cl2·H2O ([4]Cl2·H2O), have been prepared from trans-[Ru(NO2)2(Hind)4] ([2]). When the pH-dependent solution behavior of [3]Cl2·H2O and [4]Cl2·H2O was studied, two new complexes with two deprotonated indazole ligands were isolated, namely [RuCl(ind)2(Hind)2(NO)] ([5]) and [RuOH(ind)2(Hind)2(NO)] ([6]). All prepared compounds were comprehensively characterized by spectroscopic (IR, UV-vis, 1H NMR) techniques. Compound [2], as well as [3]Cl2·2(CH3)2CO, [4]Cl2·2(CH3)2CO, and [5]·0.8CH2Cl2, the latter three obtained by recrystallization of the first isolated compounds (hydrates or anhydrous species) from acetone and dichloromethane, respectively, were studied by X-ray diffraction methods. The photoinduced release of NO in [3]Cl2 and [4]Cl2 was investigated by cyclic voltammetry and resulting paramagnetic NO species were detected by EPR spectroscopy. The quantum yields of NO release were calculated and found to be low (3-6%), which could be explained by NO dissociation and recombination dynamics, assessed by femtosecond pump-probe spectroscopy. The geometry and electronic parameters of Ru species formed upon NO release were identified by DFT calculations. The complexes [3]Cl2 and [4]Cl2 showed considerable antiproliferative activity in human cancer cell lines with IC50 values in low micromolar or submicromolar concentration range and are suitable for further development as potential anticancer drugs. p53-dependence of Ru-NO complexes [3]Cl2 and [4]Cl2 was studied and p53-independent mode of action was confirmed. The effects of NO release on the cytotoxicity of the complexes with or without light irradiation were investigated using NO scavenger carboxy-PTIO.

Ultrafast Heme Dynamics of Ferric Cytochrome†c in Different Environments: Electronic, Vibrational, and Conformational Relaxation.

The excited-state dynamics of ferric cytochrome c (Cyt c), an important electron-transfer heme protein, in acidic to alkaline medium and in its unfolded form are investigated by using femtosecond pump-probe spectroscopy, exciting the heme and Tryptophan (Trp) to understand the electronic, vibrational, and conformational relaxation of the heme. At 390 nm excitation, the electronic relaxation of heme is found to be ≈150 fs at different pH values, increasing to 480 fs in the unfolded form. Multistep vibrational relaxation dynamics of the heme, including fast and slow processes, are observed at pH 7. However, in the unfolded form and at pH 2 and 11, fast phases of vibrational relaxation dominate, revealing the energy dissipation occurring through the covalent bond interaction between the heme and the nearest amino acids. A significant shortening of the excited-state lifetime of Trp is observed at various pH values at 280 nm excitation due to resonance energy transfer to the heme. The longer time constant (25 ps) observed in the unfolded form is attributed to a complete global conformational relaxation of Cyt c.

Transformation of photophysical properties from solution to solid state in alkoxy-cyano-diphenylacetylene molecules.

Detailed photophysical properties of cyano and mono (MA)/bis alkoxy (DA) substituted diphenylacetylene moieties with different alkyl chain lengths (methyl (1), octyl (8) and dodecyl (12)) were investigated in solution and the solid state in an effort to determine the effect of self-aggregation on these properties. The solvated molecules showed a minimal bathochromic shift with an increase of solvent polarity in their absorption spectra, whereas a significant shift was observed in the emission spectra. This could be attributed to the relatively low change in dipole moment between ground and Franck-Condon excited states and luminescence arising from the intramolecular charge transfer state with a dipole moment significantly higher than that of the ground state. In solid state the emission quantum yields of these materials were significantly higher than in solution. For DA1, polymorphic materials with distinct photophysical properties were obtained. The DA1 materials obtained by fast precipitation (DA1) showed broad fluorescence with peaks at 398, 467 and 535 nm upon excitation at different wavelengths. Detailed analysis of absorption, emission and excitation spectra and lifetime experiments indicated that these peaks could be attributed to the monomer, J- and H-type aggregates respectively. Whereas the crystals obtained by slow crystallization (DA1C) showed only one emission peak at around 396 nm attributed to the monomer. This is supported by the single crystal X-ray structure which consists of a monomer molecule having minimal interaction with nearest neighbour molecules.

Cyclotriphosphazene appended porphyrins and fulleropyrrolidine complexes as supramolecular multiple photosynthetic reaction centers: steady and excited states photophysical investigation.

New multiple photosynthetic reaction centers were constructed from cyclophosphazene decorated multiporphyrin chromophores and a fulleropyrrolidine having a pyridine ligand (FPY). The excited state electron transfer in the self-assembled donor-acceptor assembly was investigated by using steady state absorption and emission, time-resolved emission spectroscopy and nanosecond laser flash photolysis. The effect of metal (Zn(2+)) coordination to porphyrin units in the multiporphyrin arrays on cyclophosphazine scaffold (P3N3Zn) was studied by comparing with metal free porphyrin assembly on a cyclophosphazene scaffold (P3N3). In P3N3Zn, the decrease of absorption and fluorescence intensity and the lowering of the amplitude of longer fluorescence lifetime with increase of FPY concentration reflect the formation of a ground state complex with an association constant of ∼14,910 M(-1). When compared to the metal-free complex P3N3, the metal-coordinated derivative P3N3Zn exhibited shortening of the singlet and triplet state lifetimes and lowering of the singlet and triplet quantum yields. The cause of the decrease of the triplet quantum yields by insertion of zinc metal is discussed along with the possible non-planarity of the porphyrin ring. From the fluorescence lifetime measurements for the P3N3Zn-FPY mixture, it is proposed that self-assembly of the donor-acceptor complex leads to charge separated species with a rate constant of 7.1 × 10(9) s(-1). The decrease of triplet state intensity and lifetime of the P3N3Zn in the P3N3Zn-FPY complex from the nanosecond transient absorption studies support the occurrence of intermolecular electron transfer in the triplet state.

Effect of DNA binding on geminate CO recombination kinetics in CO-sensing transcription factor CooA.

Carbon monoxide oxidation activator (CooA) proteins are heme-based CO-sensing transcription factors. Here we study the ultrafast dynamics of geminate CO rebinding in two CooA homologues, Rhodospirillum rubrum (RrCooA) and Carboxydothermus hydrogenoformans (ChCooA). The effects of DNA binding and the truncation of the DNA-binding domain on the CO geminate recombination kinetics were specifically investigated. The CO rebinding kinetics in these CooA complexes take place on ultrafast time scales but remain non-exponential over many decades in time. We show that this non-exponential kinetic response is due to a quenched enthalpic barrier distribution resulting from a distribution of heme geometries that is frozen or slowly evolving on the time scale of CO rebinding. We also show that, upon CO binding, the distal pocket of the heme in the CooA proteins relaxes to form a very efficient hydrophobic trap for CO. DNA binding further tightens the narrow distal pocket and slightly weakens the iron-proximal histidine bond. Comparison of the CO rebinding kinetics of RrCooA, truncated RrCooA, and DNA-bound RrCooA proteins reveals that the uncomplexed and inherently flexible DNA-binding domain adds additional structural heterogeneity to the heme doming coordinate. When CooA forms a complex with DNA, the flexibility of the DNA-binding domain decreases, and the distribution of the conformations available in the heme domain becomes restricted. The kinetic studies also offer insights into how the architecture of the heme environment can tune entropic barriers in order to control the geminate recombination of CO in heme proteins, whereas spin selection rules play a minor or non-existent role.

Solvent-Controlled Photoswitching of Azobenzene: An Excited State Shuttle.

The light-controlled excited state trans-cis isomerization process is a key to the development of conversion of light energy to mechanical motion at the molecular level. Considerable efforts have been made in tuning the isomerization process with electron donor and acceptor substituents by altering the excited state reaction coordinate. Here, we report a two novel push-pull series of para-diethylamino (DEA) and diphenylamino (DPA) substituted (E)-4'-((4-(diethylamino)phenyl)diazenyl)-N,N-diphenyl-[1,1'-biphenyl]-4-amine (1) and (E)-4'-((4-(diphenylamino)phenyl)diazenyl)-N,N-diphenyl-[1,1'-biphenyl]-4-amine (2). Compounds 1 and 2 undergo both photochemical and photophysical excited state deactivation pathways which can be controlled by varying the solvent polarity. These structural motifs of 1 and 2 would undergo torsional motions upon excitation to exhibit either trans→cis photoisomerization or to form a twisted intramolecular charge transfer state and both the process originates from the same excited state and competes with each other. Thus, alternations in the surrounding environment such as solvent polarity, solution viscosity, and protonation were employed to understand the preferential excited state deactivation pathway and thereby these systems could be employed as a new class of azobenzene-based luminescent photochromic molecules. For instance, in nonpolar solvent, toluene photoisomerization is preferred over TICT, but polar solvent, ethanol preferentially stabilizes the TICT state by virtue of N-C rotation which renders the energy barrier unfavourable for photoisomerization. The photostationary state of 1 in toluene is predominantly the Z isomer, whereas in ethanol E isomer is nearly two-fold higher than the Z isomer. These feature sets up a new approach towards the construction of multinary molecular switches and subsequent development in diverse fields.

Squaraine Appended with Benzodipyrrole for Fluorescent Sensing of Methanol: Exciton Coupling Controls Photophysical Properties.

The photophysical properties of dyes composed of two squaraine chromophores fused with a benzodipyrrole central moiety (BS1 and BS2), were investigated using steady-state absorption, fluorescence, and transient absorption spectroscopy. The dyes exhibit solvent-independent split electronic absorption due to exciton-coupling. Interestingly significant solvent-dependent fluorescence properties were observed. In toluene, they emit from the lowest excited state, while in methanol, they show weak emission in the higher energy region. In the low-temperature glass matrix, emission from the lowest excited state dominates similarly to that in toluene. The transient absorption spectra exhibit similar ground-state bleaching in toluene and methanol, revealing the formation of delocalized excited states by exciton coupling independent of solvent. However, the excited state deactivates rapidly in ultrafast time scale in methanol, likely due to solvent interaction, leading to rapid non-radiative deactivation. The PEG film doped with the exciton-coupled bis-squaraine shows a distinct fluorescence response to methanol vapor.

Excimer Formation Inhibits the Intramolecular Singlet Fission Dynamics: Systematic Tilting of Pentacene Dimers by Linking Positions.

The role of excimer formation in inhibiting or enhancing the efficiency of the intramolecular singlet fission (iSF) process has been a subject of recent debate. Here, we investigated the effect of excimer formation on iSF dynamics by modifying its configuration by connecting pentacenes at various positions. Hence, pentacene dimers having slip-stacked (2,2' BP, J-type), oblique (2,6' BP), and facial (6,6' BP, H-type) configurations were synthesized by covalently linking pentacenes at positions 2,2', 2,6', and 6,6', respectively, with an ethynyl bridge, and their ultrafast excited-state relaxation dynamics were characterized. Femtosecond time-resolved transient absorption spectra revealed that the efficiency of iSF dynamics decreased from slip-stacked (182%) to oblique configuration (97%),whereas in the 6,6' BP with facial configuration, strong electronic coupling led to the formation of excimers that decayed nonradiatively without formation of correlated triplet pairs. These studies reveal the formation of excimers by strong intrapentacene electronic coupling upon ultrafast excitation, preventing the efficient iSF process.

Ultrafast Intermolecular Interaction Dynamics between NIR-Absorbing Unsymmetrical Squaraines and PCBM: Effects of Halogen Substitution.

Among near-infrared (NIR) dyes, squaraine derivatives are applied as efficient sensitizers in optoelectronic and biomedical devices due to their simple synthesis, intense absorption, and emission and exceptional photochemical stability. The fundamental understanding of the structure-property relationships of sensitizers provides the insight to increase the efficiency of such devices. Here, unsymmetrical squaraine derivatives (ABSQs) with donor-acceptor-donor (D-A-D') architectures having N,N-dimethyl amino anthracene and benzothiazole (ABSQ-H) halogenated with fluoride (ABSQ-F), chloride (ABSQ-Cl), and bromide (ABSQ-Br) were synthesized to understand the effect of halogen on the photophysical properties and intermolecular interaction dynamics with phenyl-C61-butyric acid methyl ester (PCBM), which is used widely as an electron acceptor in bulk heterojunction-based devices. Interestingly, ABSQ-H exhibited intense absorption (ε ∼ 6.72 × 104 M-1 cm-1) spectra centered at ∼660 nm. Upon halogen substitution, a bathochromic shift in the absorption spectra with an increase of molar absorptivity was observed (ε ∼ 8.59 × 104 M-1 cm-1), which is beneficial for NIR light harvesting. The femtosecond transient absorption spectra of ABSQs revealed that the polarity of the solvent controlled the excited-state relaxation dynamics. Upon addition of PCBM, the fluorescence intensity and dynamics of halogenated ABSQs were quenched, and the formation of a squaraine radical cation was observed, reflecting the occurrence of intermolecular charge-transfer dynamics between ABSQs and PCBM. Thus, the observation of a bathochromic shift with intense absorption and an efficient intermolecular interaction with PCBM upon halogenation of ABSQs provide a design strategy for the development of unsymmetrical squaraine derivatives for bulk heterojunction-based optoelectronic devices.

Synthesis, Photophysical and Electrochemical Properties of Bis-Squaraine Dyes Fused on Isomeric Benzodipyrrole Central Units.

Exciton interactions are not only observed in assembled molecules but also in compounds with multiple chromophores referred to as superchromophores. We have developed isomeric bis-squaraine dyes as superchromophores in which two squaraine chromophores are fused onto the isomeric benzodipyrrole skeleton so as to regulate conformations and to reduce distances between two chromophores. The dyes with benzo[1,2-b:3,4-b']dipyrrole and benzo[1,2-b:5,4-b']dipyrrole moieties exhibited split electronic absorption originated from the intramolecular exciton interaction. The intensity of the split absorption bands varies in correlation with the orientation of chromophores. The isomeric dye with benzo[1,2-b:4,5-b']dipyrrole moiety exhibited a near-infrared absorption associated with the resonance throughout two chromophores. Their electrochemical and spectroelectrochemical properties are distinct from those of monomeric dyes owing to electronic interactions between the two chromophores. Thus, the structural isomerism of the central skeleton significantly affects their optical properties as well as their electrochemical properties.

Vibrational coherence spectroscopy of the heme domain in the CO-sensing transcriptional activator CooA.

Femtosecond vibrational coherence spectroscopy was used to investigate the low-frequency vibrational dynamics of the heme in the carbon monoxide oxidation activator protein (CooA) from the thermophilic anaerobic bacterium Carboxydothermus hydrogenoformans (Ch-CooA). Low frequency vibrational modes are important because they are excited by the ambient thermal bath (k(B)T = 200 cm(-1)) and participate in thermally activated barrier crossing events. However, such modes are nearly impossible to detect in the aqueous phase using traditional spectroscopic methods. Here, we present the low frequency coherence spectra of the ferric, ferrous, and CO-bound forms of Ch-CooA in order to compare the protein-induced heme distortions in its active and inactive states. Distortions take place predominantly along the coordinates of low-frequency modes because of their weak force constants, and such distortions are reflected in the intensity of the vibrational coherence signals. A strong mode near ~90 cm(-1) in the ferrous form of Ch-CooA is suggested to contain a large component of heme ruffling, consistent with the imidazole-bound ferrous heme crystal structure, which shows a significant protein-induced heme distortion along this coordinate. A mode observed at ~228 cm(-1) in the six-coordinate ferrous state is proposed to be the ν(Fe-His) stretching vibration. The observation of the Fe-His mode indicates that photolysis of the N-terminal α-amino axial ligand takes place. This is followed by a rapid (~8.5 ps) transient absorption recovery, analogous to methionine rebinding in photolyzed ferrous cytochrome c. We have also studied CO photolysis in CooA, which revealed very strong photoproduct state coherent oscillations. The observation of heme-CO photoproduct oscillations is unusual because most other heme systems have CO rebinding kinetics that are too slow to make the measurement possible. The low frequency coherence spectrum of the CO-bound form of Ch-CooA shows a strong vibration at ~230 cm(-1) that is broadened and up-shifted compared to the ν(Fe-His) of Rr-CooA (216 cm(-1)). We propose that the stronger Fe-His bond is related to the enhanced thermal stability of Ch-CooA and that there is a smaller (time dependent) tilt of the histidine ring with respect to the heme plane in Ch-CooA. The appearance of strong modes at ~48 cm(-1) in both the ferrous and CO-bound forms of Ch-CooA is consistent with coupling of the heme doming distortion to the photolysis reaction in both samples. Upon CO binding and protein activation, a heme mode near 112 ± 5 cm(-1) disappears, probably indicating a decreased heme saddling distortion. This reflects changes in the heme environment and geometry that must be associated with the conformational transition activating the DNA-binding domain. Protein-specific DNA binding to the CO-bound form of Ch-CooA was also investigated, and although the CO rebinding kinetics are significantly perturbed, there are negligible changes in the low-frequency vibrational spectrum of the heme.

Planarity and Length of the Bridge Control Rate and Efficiency of Intramolecular Singlet Fission in Pentacene Dimers.

Singlet fission (SF) improves the power conversion efficiency of optoelectronic devices by converting high-energy photons into two triplet excitons. SF dynamics and efficiency (Φ) are controlled by various factors. Here, the effect of planarity and length of the bridge in pentacene dimers on the intramolecular SF (iSF) process was investigated by synthesizing the dimers connected by bridges having fluorene (FL-PD, planar), methyl-substituted biphenyl (MBP-PD, twisted), and diphenyl acetylene (DPA-PD, longer) groups and characterizing their excited-state relaxation dynamics using nanosecond and femtosecond pump-probe spectroscopy. Transient absorption studies reveal that iSF dynamics of FL-PD having a planar bridge are ∼787 times faster (187 ps) and exhibit higher Φ (198%) by feasible electronic coupling, compared to MBP-PD possessing a twisted bridge showing a low Φ of ∼16%. However compared to FL-PD, iSF dynamics of DPA-PD with an increase of bridge length are slower by an order (1.09 ns) and show comparable Φ of 185% through extended conjugation. Thus, the planarity and length of the bridge in pentacene dimers control the rate and efficiency of the iSF process.

Ultrafast Heme Relaxation Dynamics Probing the Unfolded States of Cytochrome c Induced by Liposomes: Effect of Charge of Phospholipids.

The ubiquitous electron transfer heme protein, Cytochrome c (Cyt c) catalyzes the peroxidation of cardiolipin (CL) in the early stage of apoptosis, where Cyt c undergoes conformational changes leading to the partial unfolding of the protein. Here the interaction dynamics of Cyt c with liposomes having different charges [CL, - 2; POPG (2-Oleoyl-1-palmitoyl-sn-glycero-3-phospho-rac-(1-glycerol) sodium salt), -1; and POPC (2-Oleoyl-1-palmitoyl-sn-glycero-3-phosphocholine), 0] leading to various degrees of partial unfolding is investigated with steady state optical spectroscopy and femtosecond time-resolved pump-probe spectroscopy. The signature of the partial unfolding of the protein was observed in the absorption, fluorescence, and CD spectra of Cyt c-liposome complexes with an increase of lipid/protein (L/P) ratio, and the protein was refolded by the addition of 0.1 M of NaCl. The femtosecond transient absorption spectra of the complexes were measured by selectively exciting the heme and tryptophan (Trp) at 385 and 280 nm, respectively. Though significant changes were not observed in the excited state relaxation dynamics of the heme in liposomes by exciting at 385 nm, the 280 nm excitation exhibited a systematic increase of the excited state relaxation dynamics leading to the increase of lifetime of Trp and global conformational relaxation dynamics with the increase of anionic charge of the lipids. This reveals the decrease of efficiency of fluorescence resonance energy transfer from Trp to heme due to the increase of distance between them upon increase of partial unfolding of the proteins by liposomes. Such observation exhibits the Trp as a marker amino acid to reflect the dynamics of partial unfolding of the protein rising from the change in the tertiary structure and axial ligand interaction of the heme proteins in liposomes. The relaxation dynamics of the complexes in the presence of salt are similar to that of the protein alone, reflecting that the refolding of the protein and the interactions are dominated by electrostatic interaction rather than the hydrophobic interaction.

Photoinduced dynamics of guanosine monophosphate in water from broad-band transient absorption spectroscopy and quantum-chemical calculations.

Guanosine monophosphate (GMP) in aqueous solutions has been studied with femtosecond broad-band transient absorption spectroscopy and by quantum-mechanical calculations. The sample was excited at 267 or 287 nm and probed between 270 and 1000 nm with 100 fs resolution, for various pH values between 2 and 7. At pH 2, when the guanine ring is ground-state protonated (GMPH(+)), we observe isosbestic behavior indicating state-to-state relaxation. The relaxation is biexponential, tau(1) = 0.4 ps, tau(2) = 2.2 ps, and followed by slower internal conversion with tau(3) = 167 ps. For nonprotonated GMP in the pH range 7-4, we find biexponential decay in the region 400-900 nm (tau(1) = 0.22 ps, tau(2) = 0.9 ps), whereas, between 270 and 400 nm, the behavior is triexponential with one growing, tau(1) = 0.25 ps, and two decaying, tau(2) = 1.0 ps, tau(3) = 2.5 ps, components. The excited-state evolution is interpreted with the help of quantum-chemical calculations, performed at the time-dependent PBE0 level accounting for bulk solvent effects and specific solvation. The computed dynamics involves L(a) and L(b) bright excited states, whereas the n(0)pi* and pisigma* dark excited states play a minor role. Independent of the pH, the photoinduced evolution involves ultrafast L(b)-->L(a) conversion (tau(ba) << 100 fs) and exhibits the presence of a wide planar plateau on L(a). For neutral GMP a barrierless path connects this region to a conical intersection (CI) with the ground state, giving an account of the ultrafast decay of this species. For protonated GMPH(+) the system evolves into a stable minimum L(a min) characterized by out-of-plane displacement of NH and CH groups, which explains the longer (167 ps) fluorescence lifetime.

Excited State Electronic Interconversion and Structural Transformation of Engineered Red-Emitting Green Fluorescent Protein Mutant.

Red fluorescent proteins with a large Stokes shift offer a limited autofluorescence background and are used in deep tissue imaging. Here, by introducing the free amino group in Aequorea victoria, the electrostatic charges of the p-hydroxybenzylidene imidazolinone chromophore of green fluorescent protein (GFP) have been altered resulting in an unusual, 85 nm red-shifted fluorescence. The structural and biophysical analysis suggested that the red shift is due to positional shift occupancy of Glu222 and Arg96, resulting in extended conjugation and a relaxed chromophore. Femtosecond transient absorption spectra exhibited that the excited state relaxation dynamics of red-shifted GFP (rGFP) (τ4 = 234 ps) are faster compared to the A. victoria green fluorescent protein (τ4 = 3.0 ns). The nanosecond time-resolved emission spectra of rGFP reveal the continuous spectral shift during emission by a solvent reorientation in the chromophore. Finally, the molecular dynamics simulations revealed the rearrangement of the hydrogen bond interactions in the chromophore vicinity, reshaping the symmetric distribution of van der Waals space to fine tune the GFP structure resulting from highly red-shifted rGFP.

Transient and stationary spectroscopy of cytochrome c: ultrafast internal conversion controls photoreduction.

Photoreduction of cytochrome c (Cyt c) has been reinvestigated using femtosecond-to-nanosecond transient absorption and stationary spectroscopy. Femtosecond spectra of oxidized Cyt c, recorded in the probe range 270-1000 nm, demonstrate similar evolution upon 266 or 403 nm excitation: an ultrafast 0.3 ps internal conversion followed by a 4 ps vibrational cooling. Late transient spectra after 20 ps, from the cold ground-state chromophore, reveal a small but measurable signal from reduced Cyt c. The yield phi for Fe3+-->Fe2+ photoreduction is measured to be phi(403) = 0.016 and phi(266) = 0.08 for 403 and 266 nm excitation. These yields lead to a guess of the barrier E(f)(A) = 55 kJ mol(-1) for thermal ground-state electron transfer (ET). Nanosecond spectra initially show the typical absorption from reduced Cyt c and then exhibit temperature-dependent sub-microsecond decays (0.5 micros at 297 K), corresponding to a barrier E(A)(b) = 33 kJ mol(-1) for the back ET reaction and a reaction energy DeltaE = 22 kJ mol(-1). The nanosecond transients do not decay to zero on a second time scale, demonstrating the stability of some of the reduced Cyt c. The yields calculated from this stable reduced form agree with quasistationary reduction yields. Modest heating of Cyt c leads to its efficient thermal reduction as demonstrated by differential stationary absorption spectroscopy. In summary, our results point to ultrafast internal conversion of oxidized Cyt c upon UV or visible excitation, followed by Fe-porphyrin reduction due to thermal ground-state ET as the prevailing mechanism.