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1.
Environ Sci Technol ; 56(19): 13751-13760, 2022 10 04.
Artigo em Inglês | MEDLINE | ID: mdl-36107858

RESUMO

Anoxic conditions within reservoirs related to thermal stratification and oxygen depletion lead to methylmercury (MeHg) production, a key process governing the uptake of mercury in aquatic food webs. Once formed within a reservoir, the timing and magnitude of the biological uptake of MeHg and the relative importance of MeHg export in water versus biological compartments remain poorly understood. We examined the relations between the reservoir stratification state, anoxia, and the concentrations and export loads of MeHg in aqueous and biological compartments at the outflow locations of two reservoirs of the Hells Canyon Complex (Snake River, Idaho-Oregon). Results show that (1) MeHg concentrations in filter-passing water, zooplankton, suspended particles, and detritus increased in response to reservoir destratification; (2) zooplankton MeHg strongly correlated with MeHg in filter-passing water during destratification; (3) reservoir anoxia appeared to be a key control on MeHg export; and (4) biological MeHg, primarily in zooplankton, accounted for only 5% of total MeHg export from the reservoirs (the remainder being aqueous compartments). These results improve our understanding of the role of biological incorporation of MeHg and the subsequent downstream release from seasonally stratified reservoirs and demonstrate that in-reservoir physical processes strongly influence MeHg incorporation at the base of the aquatic food web.


Assuntos
Mercúrio , Compostos de Metilmercúrio , Poluentes Químicos da Água , Monitoramento Ambiental , Cadeia Alimentar , Humanos , Hipóxia , Mercúrio/análise , Compostos de Metilmercúrio/metabolismo , Oxigênio , Rios , Água , Poluentes Químicos da Água/análise
2.
J Am Soc Nephrol ; 32(7): 1666-1681, 2021 Jul.
Artigo em Inglês | MEDLINE | ID: mdl-33952630

RESUMO

BACKGROUND: Identification of target antigens PLA2R, THSD7A, NELL1, or Semaphorin-3B can explain the majority of cases of primary membranous nephropathy (MN). However, target antigens remain unidentified in 15%-20% of patients. METHODS: A multipronged approach, using traditional and modern technologies, converged on a novel target antigen, and capitalized on the temporal variation in autoantibody titer for biomarker discovery. Immunoblotting of human glomerular proteins followed by differential immunoprecipitation and mass spectrometric analysis was complemented by laser-capture microdissection followed by mass spectrometry, elution of immune complexes from renal biopsy specimen tissue, and autoimmune profiling on a protein fragment microarray. RESULTS: These approaches identified serine protease HTRA1 as a novel podocyte antigen in a subset of patients with primary MN. Sera from two patients reacted by immunoblotting with a 51-kD protein within glomerular extract and with recombinant human HTRA1, under reducing and nonreducing conditions. Longitudinal serum samples from these patients seemed to correlate with clinical disease activity. As in PLA2R- and THSD7A- associated MN, anti-HTRA1 antibodies were predominantly IgG4, suggesting a primary etiology. Analysis of sera collected during active disease versus remission on protein fragment microarrays detected significantly higher titers of anti-HTRA1 antibody in active disease. HTRA1 was specifically detected within immune deposits of HTRA1-associated MN in 14 patients identified among three cohorts. Screening of 118 "quadruple-negative" (PLA2R-, THSD7A-, NELL1-, EXT2-negative) patients in a large repository of MN biopsy specimens revealed a prevalence of 4.2%. CONCLUSIONS: Conventional and more modern techniques converged to identify serine protease HTRA1 as a target antigen in MN.

3.
Nicotine Tob Res ; 22(2): 238-247, 2020 02 06.
Artigo em Inglês | MEDLINE | ID: mdl-30982885

RESUMO

BACKGROUND: Alcohol is often consumed with tobacco, and dependence to alcohol and tobacco are highly comorbid. In addition, there are differences in the prevalence of nicotine- and alcohol-abuse between the sexes. Nicotine produces enhancing effects on the value of other reinforcers, which may extend to alcohol. METHODS: Male and female Wistar rats were trained to self-administer 15% ethanol solution in 30-minute sessions. Once ethanol self-administration was established, demand for ethanol was evaluated using an exponential reinforcer demand method, in which the response cost per reinforcer delivery was systematically increased over blocks of several sessions. Within each cost condition, rats were preinjected with nicotine (0.05, 0.1, 0.2, or 0.4 mg/kg base, SC) or saline 5 minutes before self-administration sessions. The effects of nicotine dose and biological sex were evaluated using the estimates generated by the reinforcer demand model. RESULTS: Under saline conditions, males showed greater sensitivity to ethanol reinforcement than females. Nicotine enhanced the reinforcement value of alcohol and this varied with sex. In both sexes, 0.4 mg/kg nicotine decreased intensity of ethanol demand. However, 0.05, 0.1, and 0.2 mg/kg nicotine decreased elasticity of ethanol demand in females, but not in males. CONCLUSIONS: Nicotine enhances ethanol reinforcement, which may partially drive comorbidity between nicotine-abuse and alcohol-abuse. Males showed signs of greater ethanol reinforcement value than females under saline conditions, and nicotine attenuated this effect by increasing ethanol reinforcement value in the females. These findings highlight that a complete understanding of alcohol-abuse must include a thorough study of alcohol use in the context of other drug use, including nicotine. IMPLICATIONS: Nicotine dose dependently enhances the alcohol reinforcement value in a manner that is clearly influenced by biological sex. Under saline baseline conditions, males show lower elasticity of demand for alcohol reinforcement than females, indicative of greater reinforcement value. However, nicotine attenuated this difference by enhancing alcohol reward in the females. Specifically, low-to-moderate doses (0.05-0.2 mg/kg) of nicotine decreased elasticity of alcohol demand in female rats, increasing the perseverance of their alcohol taking behavior. These data indicate that the well-documented reward-enhancing effects of nicotine on sensory reinforcement extend to alcohol reinforcement and that these vary with biological sex.


Assuntos
Consumo de Bebidas Alcoólicas/psicologia , Etanol/administração & dosagem , Nicotina/administração & dosagem , Reforço Psicológico , Recompensa , Caracteres Sexuais , Animais , Condicionamento Operante/efeitos dos fármacos , Condicionamento Operante/fisiologia , Feminino , Masculino , Ratos , Ratos Sprague-Dawley , Ratos Wistar , Autoadministração
4.
Am J Transplant ; 19(1): 285-290, 2019 01.
Artigo em Inglês | MEDLINE | ID: mdl-30040181

RESUMO

Karyomegalic interstitial nephritis (KIN) is a rare renal interstitial disease entity characterized by large tubular nuclei, accompanied by interstitial inflammation, tubular atrophy, and interstitial fibrosis. Approximately 50 cases of KIN have been described in the native kidney. In this case study, we describe the first case of KIN in a kidney allograft. A 41-year-old man presented with declining kidney function and a serum creatinine of 2.7 mg/dL. The native kidney biopsy showed large pleomorphic nuclei in the proximal and distal tubular epithelial cells, which was associated with interstitial inflammation, and extensive interstitial fibrosis and tubular atrophy. Immunohistochemistry for cytomegalovirus, adenovirus, and simian virus 40 were negative. A diagnosis of KIN was rendered. The patient received a living-related kidney transplant from his sister. At 4-, 12-, and 24-months posttransplant, protocol allograft biopsies showed KIN with large pleomorphic nuclei in the proximal and distal tubules with mild interstitial inflammation, minimal tubular atrophy, and interstitial fibrosis. At 24.7 months of follow-up, the patient has stable renal function with a serum creatinine of 1.6 mg/dL. The KIN may represent recurrent KIN or donor-associated KIN. Recognition of this rare disease entity is important as it can be mistaken for a viral infection.


Assuntos
Falência Renal Crônica/cirurgia , Transplante de Rim , Rim/cirurgia , Nefrite Intersticial/complicações , Adulto , Biópsia , Creatinina/sangue , Diabetes Mellitus Tipo 2/complicações , Fibrose , Taxa de Filtração Glomerular , Sobrevivência de Enxerto , Humanos , Hiperlipidemias/complicações , Hipertensão/complicações , Hipotireoidismo/complicações , Inflamação , Rim/patologia , Falência Renal Crônica/complicações , Testes de Função Renal , Túbulos Renais/patologia , Masculino , Nefrite Intersticial/patologia , Prevalência , Fatores de Tempo
7.
Pediatr Nephrol ; 28(12): 2307-11, 2013 Dec.
Artigo em Inglês | MEDLINE | ID: mdl-23903693

RESUMO

BACKGROUND: Membranous glomerulopathy, though typically a disease of adults, does occur in children. Antiphospholipase A2 receptor (PLA2R) autoantibodies have recently been implicated as a causative agent in most cases of adult primary (idiopathic) membranous glomerulopathy. PLA2R staining of renal biopsies in two recent large case series of adults with primary membranous glomerulopathy showed a sensitivity of approximately 75 % for detecting primary membranous glomerulopathy. To our knowledge, this is the largest study of its kind to assess PLA2R staining in a pediatric population. METHODS: Forty-one consecutive cases of pediatric membranous glomerulopathy were identified from our database, and clinical follow-up was performed to confirm primary membranous glomerulopathy. Twenty-two patients met inclusion criteria and are the subject of this report. RESULTS: Granular, capillary loop immunofluorescence staining for immunoglobulin G (IgG) was present in 100 % of patients, and C3 staining was present in 77 %. PLA2R staining was identified in ten patients, providing a sensitivity of 45 % [confidence interval (CI) 25-67 %]. Bovine serum albumin staining was performed in all PLA2R-negative cases and showed no positivity. Morphologic findings associated with negative PLA2R staining included segmental membranous lesions, mesangial and subendothelial deposits, C1q and "full-house" staining, and lower-stage lesions by electron microscopy. At 38 months' average follow-up, all patients were still considered as having primary membranous glomerulopathy, with none developing a clinically detectable secondary etiology. CONCLUSIONS: PLA2R staining sensitivity is much lower in the pediatric than the adult primary membranous glomerulopathy population. This finding suggests a more diverse and currently incompletely described set of etiologies for this disease in this group.


Assuntos
Glomerulonefrite Membranosa/metabolismo , Rim/química , Receptores da Fosfolipase A2/análise , Adolescente , Fatores Etários , Biomarcadores/análise , Biópsia , Criança , Pré-Escolar , Complemento C1q/análise , Complemento C3/análise , Feminino , Imunofluorescência , Glomerulonefrite Membranosa/imunologia , Glomerulonefrite Membranosa/patologia , Humanos , Imunoglobulina G/análise , Rim/imunologia , Rim/patologia , Masculino , Valor Preditivo dos Testes , Prognóstico , Fatores de Risco , Fatores de Tempo
8.
Environ Monit Assess ; 185(9): 7263-77, 2013 Sep.
Artigo em Inglês | MEDLINE | ID: mdl-23371248

RESUMO

Robust monitoring of carbon sequestration by forests requires the use of multiple data sources analyzed at a common scale. To that end, model-based Moderate Resolution Imaging Spectroradiometer (MODIS) and field-based Forest Inventory and Analysis (FIA) data of net primary productivity (NPP) were compared at increasing levels of spatial aggregation across the eastern USA. A total of 52,167 FIA plots and colocated MODIS forest cover NPP pixels were analyzed using a hexagonal tiling system. A protocol was developed to assess the optimal scale as an optimal size of landscape patches at which to map spatially explicit estimates of MODIS and FIA NPP. The optimal mapping resolution (hereafter referred to as optimal scale) is determined using spatially scaled z-statistics as the tradeoff between increased spatial agreement as measured by Pearson's correlation coefficient and decreased details of coverage as measured by the number of hexagons. Spatial sensitivity was also assessed using land cover assessment and forest homogeneity using spatially scaled z-statistics. Pearson correlations indicate that MODIS and FIA NPP are most highly correlated when using large hexagons, while z-statistics indicate an optimal scale at an intermediate hexagon size of 390 km(2). This optimal scale had more spatial detail than was obtained for larger hexagons and greater spatial agreement than was obtained for smaller hexagons. The z-statistics for land cover assessment and forest homogeneity also indicated an optimal scale of 390 km(2).


Assuntos
Monitoramento Ambiental/métodos , Imagens de Satélites , Árvores , Biomassa , Modelos Teóricos , Estados Unidos
9.
Kidney Int Rep ; 8(3): 575-583, 2023 Mar.
Artigo em Inglês | MEDLINE | ID: mdl-36938088

RESUMO

Introduction: Renal intravascular large B-cell lymphoma (IVLBCL) is a rare, aggressive B-cell lymphoma with neoplastic cells occupying the vascular lumina with only 53 patients reported to date. Here, we present the largest case series to characterize this rare disease. Methods: We performed a multi-institutional, retrospective review of kidney biopsies and autopsies with a diagnosis of kidney IVLBCL and report our findings. Results: We identified 20 patients with an average age of 65.7 ± 7.8 years (55% males) with IVLBCL on kidney biopsy. The most common clinical presentation was fever and anemia. Acute kidney injury (AKI) was noted in 70% to 90%, proteinuria in 70% to 84.1%, hematuria in 45%, and nephrotic-range proteinuria in 10% to 26.1% of cases. The median (interquartile range) of serum creatinine was 1.75 (1.14, 3.3) mg/dl. Neoplastic lymphoid cells were present in glomeruli, peritubular capillaries, and arteries or veins. Of the patients, 44.3% showed extrarenal infiltration into bone marrow, liver, spleen, central vervous system, lung and skin. Neoplastic cells express CD20, CD79a, PAX-5, and MUM1+, and were CD10-negative. Available follow-up data showed a median survival of 21 months after diagnosis. Extrarenal involvement is a significant and independent predictor of mortality with a hazard ratio of 4.975 (95% confidence interval:1.38, 17.88) after controlling for age and gender. Serum creatinine, age, sex, and infiltration of intrarenal arteries or veins did not affect survival. Conclusion: Kidney IVLBCL is a rare disease that is unexpectedly diagnosed by kidney biopsy, presenting with fever, anemia, mild AKI, and proteinuria. Median survival is 21 months and extrarenal involvement is associated with worse outcome.

10.
Ann Am Thorac Soc ; 17(12): 1610-1619, 2020 12.
Artigo em Inglês | MEDLINE | ID: mdl-32663043

RESUMO

Rationale: Understand the impact of insurance coverage on sleep apnea outcomes for patients awaiting upper airway stimulation.Objectives: Examine the natural history of impact of upper airway stimulation treatment versus insurance denial (comparators) on sleep apnea outcomes.Methods: A parallel-arm experimental study design was used to compare objective sleep apnea measures and patient-reported outcomes in those who received upper airway stimulation approval versus denial in a multinational prospective study (NCT02907398). Wilcoxon rank-sum test and logistic regression models were used to assess for differences of objective and subjective outcome changes in those who underwent upper airway stimulation versus no treatment comparators.Results: A greater reduction in apnea-hypopnea index was observed in those who underwent upper airway stimulation (n = 230, follow-up: 360 ± 171 d) versus no treatment (n = 100, follow-up: 272 ± 278 d), that is, -19.1 ± 15.8 versus -8.1 ± 20.9, respectively, P < 0.001, with consistent findings observed with nocturnal hypoxia measures. Concordantly, a greater improvement noted with subjective measures of dozing propensity was observed in patients undergoing upper airway stimulation versus comparators (Epworth Score, -5.1 ± 5.5 vs. 1.8 ± 3.7, respectively, P < 0.001) and overall sleep-related patient-reported outcomes. Women and those with previous oral appliance use had a lower odds of insurance approval (odds ratio [OR], 0.40; 95% confidence interval [95% CI], 0.22-0.71 and OR, 0.35; 95% CI, 0.18-0.69, respectively).Conclusions: Objective and subjective sleep apnea burden was more improved in those receiving upper airway stimulation versus not. Results underscore the need to optimize clinical care pathways focused on effective treatment of patients with obstructive sleep apnea who are not upper airway stimulation-insurance eligible and prioritize public health policy initiatives to address insurance-based sex-specific disparities.


Assuntos
Apneia Obstrutiva do Sono , Pressão Positiva Contínua nas Vias Aéreas , Feminino , Humanos , Masculino , Medidas de Resultados Relatados pelo Paciente , Estudos Prospectivos , Apneia Obstrutiva do Sono/terapia , Resultado do Tratamento
11.
Transplantation ; 103(6): 1199-1205, 2019 06.
Artigo em Inglês | MEDLINE | ID: mdl-30300284

RESUMO

BACKGROUND: Kidney transplantation confers substantial survival and quality of life benefits for many patients with end-stage kidney disease compared with dialysis, but complications and side effects of immunosuppression can impair participation in daily life activities. Life participation is a critically important patient-reported outcome for kidney transplant recipients but is infrequently and inconsistently measured in trials. We convened a consensus workshop on establishing an outcome measure for life participation for use in all trials in kidney transplantation. METHODS: Twenty-five (43%) kidney transplant recipients/caregivers and 33 (57%) health professionals from 8 countries participated in 6 facilitated breakout group discussions. Transcripts were analyzed thematically. RESULTS: Four themes were identified. Returning to normality conveyed the patients' goals to fulfill their roles (ie, in their family, work, and community) and reestablish a normal lifestyle after transplant. Recognizing the diverse meaning and activities of "life" explicitly acknowledged life participation as a subjective concept that could refer to different activities (eg, employment, recreation, family duties) for each individual patient. Capturing vulnerability and fluctuations posttransplant (eg, due to complications and side-effects) distinguished between experiences in the first year posttransplant and the long-term impact of transplantation. Having a scientifically rigorous, feasible, and meaningful measure was expected to enable consistent and frequent assessment of life participation in trials in kidney transplantation. CONCLUSIONS: A feasible and validated core outcome measure for life participation is needed so that this critically important patient-reported outcome can be consistently and meaningfully assessed in trials in kidney transplantation to inform decision making and care of recipients.


Assuntos
Atividades Cotidianas , Imunossupressores/uso terapêutico , Falência Renal Crônica/cirurgia , Transplante de Rim , Estilo de Vida , Qualidade de Vida , Consenso , Nível de Saúde , Humanos , Imunossupressores/efeitos adversos , Falência Renal Crônica/diagnóstico , Falência Renal Crônica/fisiopatologia , Falência Renal Crônica/psicologia , Transplante de Rim/efeitos adversos , Saúde Mental , Medidas de Resultados Relatados pelo Paciente , Fatores de Risco , Fatores de Tempo , Resultado do Tratamento
12.
PLoS One ; 13(9): e0203881, 2018.
Artigo em Inglês | MEDLINE | ID: mdl-30226902

RESUMO

Assessing geographic patterns of species richness is essential to develop biological conservation as well as to understand the processes that shape these patterns. We aim to improve geographic prediction of tree species richness (TSR) across eastern USA by using: 1) gridded point-sample data rather than spatially generalized range maps for the TSR outcome variable, 2) new predictor variables (forest area FA; mean frost day frequency MFDF) and 3) regression models that account for spatial autocorrelation. TSR was estimated in 50 km by 50 km grids using Forest Inventory and Analysis (FIA) point-sample data. Eighteen environmental predictor variables were employed, with the most effective set selected by a LASSO that reduced multicollinearity. Those predictors were then employed in Generalized linear models (GLMs), and in Eigenvector spatial filtering (ESF) models that accounted for spatial autocorrelation. Models were evaluated by model fit statistics, spatial patterns of TSR predictions, and spatial autocorrelation. Our results showed gridded TSR was best-predicted by the ESF model that used, in descending order of influence: precipitation seasonality, mean precipitation in the driest quarter, FA, and MFDF. ESF models, by accounting for spatial autocorrelation, outperformed GLMs regardless of the predictors employed, as indicated by percent deviance explained and spatial autocorrelation of residuals. Small regions with low TSR, such as the Midwest prairie peninsula, were successfully predicted by ESF models, but not by GLMs or other studies. Gridded TSR in Florida was only correctly predicted by the ESF model with FA and MFDF, and was over-predicted by all other models.


Assuntos
Biodiversidade , Previsões/métodos , Florestas , Ecossistema , Modelos Estatísticos , Modelos Teóricos , Análise de Regressão , Análise Espacial , Árvores , Estados Unidos
13.
BMJ Case Rep ; 20182018 Mar 28.
Artigo em Inglês | MEDLINE | ID: mdl-29592978

RESUMO

Upper airway stimulation of the tongue using an implantable neurostimulator has recently been approved for select patients with moderate to severe obstructive sleep apnoea (OSA) and intolerance to continuous positive airway pressure therapy. Effective implantation depends on the integrity of the hypoglossal nerve as well as the tongue musculature, notably the genioglossus. Prior trauma to either of these structures may be viewed as a relative contraindication to implantation. We describe a case of successful right hypoglossal nerve implantation in a patient with a history of left cardiac pacemaker placement and severe left penetrating tongue trauma with decreased mobility from contracture and deviation mimicking a hypoglossal nerve palsy. Preoperative and postoperative apnoea-hypopnoea index values were 52/hour and 5/hour, respectively. Prior soft tissue trauma to the tongue may not necessarily preclude surgical candidacy for upper airway stimulation in patients with OSA.


Assuntos
Terapia por Estimulação Elétrica/métodos , Nervo Hipoglosso , Neuroestimuladores Implantáveis , Lacerações/complicações , Apneia Obstrutiva do Sono/terapia , Língua/lesões , Idoso , Humanos , Masculino , Apneia Obstrutiva do Sono/complicações
14.
Heart Rhythm ; 15(8): 1165-1170, 2018 08.
Artigo em Inglês | MEDLINE | ID: mdl-29678782

RESUMO

BACKGROUND: Implantable hypoglossal nerve upper airway stimulation (HNS) is a novel strategy approved by the US Food and Drug Administration for the management of moderate-to-severe obstructive sleep apnea (OSA) in patients with continuous positive airway pressure therapy intolerance or failure. Because of the proximity of a cardiac implantable electronic device (CIED) to this stimulator, interaction between these devices is theoretically possible. OBJECTIVE: The purpose of this study was to assess interactions between an implantable HNS device and a CIED. METHODS: We retrospectively analyzed 14 ad hoc patients with continuous positive airway pressure-intolerant, moderate-to-severe OSA and pre-existing transvenous CIEDs undergoing HNS implantation (Inspire II, Inspire Medical Systems). We assessed these devices for their pre and postimplant OSA outcomes and for possible device-device interaction. All patients were followed up for 1 year. RESULTS: Of the 14 patients, 9 had a pacemaker (8 dual-chamber, 1 single-chamber), 4 had an implantable cardioverter-defibrillator (2 dual-chamber, 1 single-chamber), and 1 had a cardiac resynchronization therapy device. All the HNS devices were implanted on the opposite side of the CIED. All CIEDs were programmed bipolar. HNS were programmed either unipolar or bipolar. During implant, intraoperative testing was performed to confirm that bipolar and unipolar HNS stimulation did not impact CIED sensing. During the follow-up period, no oversensing episodes were noted on the CIEDs. CONCLUSION: In this early experience, simultaneous use of a novel hypoglossal nerve upper airway stimulation device with transvenous CIEDs seems to be safe, effective, and without any device-device interactions.


Assuntos
Pressão Positiva Contínua nas Vias Aéreas/métodos , Desfibriladores Implantáveis , Terapia por Estimulação Elétrica/métodos , Nervo Hipoglosso/fisiopatologia , Apneia Obstrutiva do Sono/terapia , Idoso , Estudos de Viabilidade , Feminino , Seguimentos , Humanos , Masculino , Polissonografia , Estudos Retrospectivos , Apneia Obstrutiva do Sono/fisiopatologia , Fatores de Tempo , Resultado do Tratamento
15.
Sci Rep ; 8(1): 12993, 2018 09 06.
Artigo em Inglês | MEDLINE | ID: mdl-30190595

RESUMO

Glacial retreat in recent decades has exposed unstable slopes and allowed deep water to extend beneath some of those slopes. Slope failure at the terminus of Tyndall Glacier on 17 October 2015 sent 180 million tons of rock into Taan Fiord, Alaska. The resulting tsunami reached elevations as high as 193 m, one of the highest tsunami runups ever documented worldwide. Precursory deformation began decades before failure, and the event left a distinct sedimentary record, showing that geologic evidence can help understand past occurrences of similar events, and might provide forewarning. The event was detected within hours through automated seismological techniques, which also estimated the mass and direction of the slide - all of which were later confirmed by remote sensing. Our field observations provide a benchmark for modeling landslide and tsunami hazards. Inverse and forward modeling can provide the framework of a detailed understanding of the geologic and hazards implications of similar events. Our results call attention to an indirect effect of climate change that is increasing the frequency and magnitude of natural hazards near glaciated mountains.

17.
J Forensic Sci ; 49(4): 691-700, 2004 Jul.
Artigo em Inglês | MEDLINE | ID: mdl-15317182

RESUMO

The Y-PLEX 6 and Y-PLEX 5 systems enable analysis for 11 Y-STR loci. We present here the utility of these systems in forensic casework. A total of 188 samples, including 127 evidence samples, were analyzed using either or both of the systems. The evidence sample types included fingernail scrapings, sperm or seminal fluid, epithelial cells, blood and other tissues. The Y-STR typing systems provided useful probative results in difficult cases. A reference database for Caucasian (n = 517), African American (n = 535), and Hispanic (n = 245) population groups within the United States was generated for estimating the haplotype frequency in forensic casework. Among the individuals profiled, 311 Caucasians, 412 African Americans, and 194 Hispanics provided unique profiles in their respective population datasets. This is the first report describing the haplotype database for the set of 11 Y-STR loci recommended by the Scientific Working Group on DNA Analysis Methods (SWGDAM). Linkage analysis reveals that the frequencies from forensically important autosomal loci can be multiplied with the Y-STR haplotype frequency. The results from Y-PLEX systems have been accepted in courts in the United States.


Assuntos
Cromossomos Humanos Y , Impressões Digitais de DNA/métodos , Haplótipos , Reação em Cadeia da Polimerase/métodos , Grupos Raciais/genética , Sequências de Repetição em Tandem , DNA/análise , Bases de Dados Genéticas , Feminino , Genética Populacional , Humanos , Masculino , Valores de Referência , Estados Unidos
18.
Clin J Am Soc Nephrol ; 9(8): 1434-40, 2014 Aug 07.
Artigo em Inglês | MEDLINE | ID: mdl-24948143

RESUMO

BACKGROUND AND OBJECTIVES: Presumed genetic risk for diabetic and nondiabetic end stage renal disease is strong in African Americans. DESIGN, SETTING, PARTICIPANTS, & MEASUREMENTS: Exome sequencing data from African Americans with type 2 diabetic end stage renal disease and nondiabetic, non-nephropathy controls in the T2D-GENES study (Discovery, n=529 patients and n=535 controls) were evaluated, focusing on missense variants in NPHS1. Associated variants were then evaluated in independent type 2 diabetic end stage renal disease (Replication, n=1305 patients and n=760 controls), nondiabetic end stage renal disease (n=1705), and type 2 diabetes-only, non-nephropathy samples (n=503). All participants were recruited from dialysis facilities and internal medicine clinics across the southeastern United States from 1991 to present. Additional NPHS1 missense variants were identified from exome sequencing resources, genotyped, and sequence kernel association testing was then performed. RESULTS: Initial analysis identified rs35238405 (T233A; minor allele frequency=0.0096) as associated with type 2 diabetic end stage renal disease (adjustment for admixture P=0.042; adjustment for admixture+APOL1 P=0.080; odds ratio, 2.89 and 2.36, respectively); with replication in independent type 2 diabetic end stage renal disease samples (P=0.018; odds ratio, 4.30) and nondiabetic end stage renal disease samples (P=0.016; odds ratio, 4.48). In a combined analysis (all patients with end stage renal disease versus all controls), T233A was associated with all-cause end stage renal disease (P=0.0038; odds ratio, 2.82; n=3270 patients and n=1187 controls). A P-value of <0.001 was obtained after adjustment for admixture and APOL1 in sequence kernel association testing. Two additional variants (H800R and Y1174H) were nominally associated with protection from end stage renal disease (P=0.036; odds ratio, 0.44; P=0.0084; odds ratio, 0.040, respectively) in the locus-wide single-variant association tests. CONCLUSIONS: Coding variants in NPHS1 are associated with both risk for and protection from common forms of nephropathy in African Americans.


Assuntos
Negro ou Afro-Americano/genética , Nefropatias Diabéticas/genética , Falência Renal Crônica/genética , Proteínas de Membrana/genética , Polimorfismo de Nucleotídeo Único , Idoso , Apolipoproteína L1 , Apolipoproteínas/genética , Estudos de Casos e Controles , Diabetes Mellitus Tipo 2/complicações , Nefropatias Diabéticas/etnologia , Feminino , Frequência do Gene , Predisposição Genética para Doença , Humanos , Falência Renal Crônica/etnologia , Lipoproteínas HDL/genética , Masculino , Pessoa de Meia-Idade , Razão de Chances , Fenótipo , Fatores de Proteção , Medição de Risco , Fatores de Risco
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