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1.
Artigo em Inglês | MEDLINE | ID: mdl-37000636

RESUMO

Five aerobic, Gram-stain-negative, non-motile, non-spore-forming, short rod bacteria strains, designated as C3-1-R+6T, C3-2-M9, B3-2-R-7, B3-2-R-21 and C3-2-M2, were isolated from shore soil of LungmuCo Lake in Tibet of China. The 16S rRNA gene sequence comparisons confirmed their affiliation to the genus Parapedobacter of the family Sphingobacteriaceae, and showed that they were most closely related to Parapedobacter lycopersici KACC 18788T with 94.26 % similarities. The average nucleotide identity (ANI), average amino acid identity (AAI) and digital DNA-DNA hybridization (dDDH) values between them and the validly published Parapedobacter species were all below the thresholds for delineating species, supporting that they were novel species of genus Parapedobacter. The ANI, AAI and dDDH values between strains C3-1-R+6T and Parapedobacter lycopersici KACC 18788T were 72, 75, and 18% respectively. Meanwhile, the ANI/AAI and dDDH values between these five isolates were higher than the threshold values, showing that they belonged to the same species of Parapedobacter. According to genome comparison, the novel isolates have some special biosynthetic gene clusters of secondary metabolites including bacteriton, aryl-polyene, lantipeptide and t1pks, which were absent from their most related phylogenetic neighbours P. lycopersici KACC 18788T and P. pyrenivorans CGMCC 1.12195T. The main polar lipids contained phosphatidylethanolamine, one unidentified phospholipid, one unidentified aminolipid, one unidentified glycolipid and five unidentified lipids. The predominant respiratory quinone was MK-7. The major cellular fatty acids were iso-C15 : 0, summed feature 3 (C16 : 1 ω7c and/or C16 : 1 ω6c) and iso-C17 : 0 3-OH. The genome size of strain C3-1-R+6T was 5 984 948 bp, and its genomic DNA G+C content was 46.21 mol%. To sum up, the five strains were identified as a novel species of the genus Parapedobacter, for which the name Parapedobacter tibetensis sp. nov. was proposed. The type strain was C3-1-R+6T (=CGMCC 1.19194T=KCTC 92150T).


Assuntos
Ácidos Graxos , Solo , Ácidos Graxos/química , Tibet , Filogenia , RNA Ribossômico 16S/genética , Lagos , Técnicas de Tipagem Bacteriana , DNA Bacteriano/genética , Composição de Bases , Análise de Sequência de DNA , China
2.
Cell Microbiol ; 22(7): e13193, 2020 07.
Artigo em Inglês | MEDLINE | ID: mdl-32068939

RESUMO

The type III secretion system effector EseJ plays a regulatory role inside bacteria. It suppresses the adherence of Edwardsiella piscicida (E. piscicida) to host epithelial cells by down regulating type 1 fimbriae. In this study, we observed that more macrophages infected with ΔeseJ strain of E. piscicida detached as compared with those infected with the wild-type (WT) strain. Terminal deoxynucleotidyl transferase dUTP nick-end labelling (TUNEL) staining and cleaved caspase-3 examination revealed that the detachment is due to increased apoptosis, suggesting that EseJ suppresses macrophage apoptosis. However, apoptosis inhibition by EseJ is not relative to a type III secretion system (T3SS) and is not related to EseJ's translocation. Since EseJ negatively regulates type 1 fimbriae, murine J774A.1 cells were infected with ΔeseJΔfimA or ΔeseJΔfimH strains. It was demonstrated that ΔeseJ stimulates macrophage apoptosis through type 1 fimbriae. Moreover, we found that infecting J774A.1 cells with the ΔeseJ strain increased levels of cleaved caspase-8, caspase-9, and caspase-3, demonstrating that EseJ inhibits apoptosis through either an extrinsic or a combination of extrinsic and intrinsic pathways. Pre-treatment of macrophages with caspase-8 inhibitor prior to infection with the ΔeseJ strain decreased the levels of cleaved caspase-8, caspase-9, and caspase-3, indicating that the ΔeseJ strain stimulates apoptosis, mainly through an extrinsic pathway by up regulating type 1 fimbriae. Zebrafish larvae or blue gourami fish infected with the ΔeseJ strain consistently exhibited higher apoptosis than those infected with the E. piscicida WT strain or ΔeseJΔfimA strain. Taken together, we revealed that the T3SS protein EseJ of E. piscicida inhibits host apoptosis, mainly through an extrinsic pathway by down regulating type 1 fimbriae.


Assuntos
Proteínas de Bactérias/metabolismo , Caspase 8/metabolismo , Edwardsiella/metabolismo , Fímbrias Bacterianas/metabolismo , Animais , Apoptose , Caspase 3 , Caspase 9 , Linhagem Celular , Edwardsiella/patogenicidade , Infecções por Enterobacteriaceae/metabolismo , Epitopos , Doenças dos Peixes/microbiologia , Interações Hospedeiro-Patógeno/fisiologia , Larva , Lipopolissacarídeos , Macrófagos , Camundongos , Sistemas de Secreção Tipo III/metabolismo , Peixe-Zebra
3.
Artigo em Inglês | MEDLINE | ID: mdl-33909549

RESUMO

A Gram-stain-negative, aerobic, flagellated, non-spore-forming, rod-shaped bacterium, named B2R-29T, was isolated from water collected from a crater lake on Da Hinggan mountain, PR China. Strain B2R-29T was oxidase- and catalase-positive. On the basis of the results of 16S rRNA gene sequence analyses, strain B2R-29T clearly belonged to the family Oxalobacteraceae, class Betaproteobacteria and showed the highest similarity to Undibacterium oligocarboniphilum EM1T (97.4 %) and to the other species of Undibacterium (less than 96.8 %). In the phylogenetic tree, strain B2R-29T formed a clade with U. oligocarboniphilum EM1T and Undibacterium squillarum CMJ-9T, indicating that is a member of the genus Undibacterium. Digital DNA-DNA hybridization and average nucleotide identity analyses were performed and the values between strain B2R-29T and its closely related Undibacterium species were less than 75.1 % and 16.9 %, respectively. The chemotaxonomic data of B2R-29T were as follows: major uniquinone, Q-8; predominant polar lipids, phosphatidylethanolamine, diphosphatidylglycerol and phosphatidylglycerol; major fatty acids, C16 : 0 and summed feature 3 (C16 : 1 ω7c / C16 : 1 ω6c); predominant polyamines, putrescine, 2-hydroxyputrescine and spermidine. The DNA G+C content was 51.7 mol% from the genomic sequencing data. In accordance with the phenotypic, physiological and chemotaxonomic properties mentioned above, strain B2R-29T represents a novel species of the genus Undibacterium for which the name Undibacterium crateris sp. nov. is proposed. The type strain is B2R-29T (=CGMCC 1.13792T=KCTC 72018T).


Assuntos
Lagos/microbiologia , Oxalobacteraceae/classificação , Filogenia , Técnicas de Tipagem Bacteriana , Composição de Bases , China , DNA Bacteriano/genética , Ácidos Graxos/química , Hibridização de Ácido Nucleico , Oxalobacteraceae/isolamento & purificação , Fosfolipídeos/química , Poliaminas/química , RNA Ribossômico 16S/genética , Análise de Sequência de DNA , Ubiquinona/química
4.
Int J Syst Evol Microbiol ; 70(8): 4831-4837, 2020 Aug.
Artigo em Inglês | MEDLINE | ID: mdl-32701427

RESUMO

Two bacterial strains, designated B2N2-7T and B2N2-12, were isolated from Buteha crater lake in the Greater Khingan Mountain of China. The two strains were Gram-stain-negative, non-spore-forming, motile with a single polar flagellum, short rod-shaped bacteria. They were catalase- and oxidase-positive. Optimal growth occurred at 20-25 ℃, at pH 7.5-8.0 and with 0-1.0 % (w/v) NaCl. Based on phylogenomic analysis, strains B2N2-7T and B2N2-12 were assigned to the family Neisseriaceae, and their 16S rRNA gene sequences showed the highest similarities to that of Aquitalea denitrificans 5YN1-3T (<94.2 %). The predominant cellular fatty acids were C16 : 0 and summed feature 3 (comprising C16 : 1ω7c/C16 : 1 ω6c). The major respiratory quinone was ubiquinone 8 (Q-8). The polar lipids were phosphatidylglycerol (PG), diphosphatidylglycerol (DPG), phosphatidylethanolamine (PE), two unidentified aminophospholipids (APL) and some unidentified lipids (L). The genomic DNA G+C content of strain B2N2-7T was 59.4 mol% according to the genomic sequencing result. Based on the phylogenetic, genotypic and chemotaxonomic analyses, the two strains are proposed to represent a novel species of a new genus in the family Neisseriaceae, named Craterilacuibacter sinensis gen. nov., sp. nov. The type strain of Craterilacuibacter sinensis is B2N2-7T (=CGMCC 1.17189T=KCTC 73735T); B2N2-12 (=CGMCC 1.17190=KCTC 72734) is a second strain of the species.


Assuntos
Betaproteobacteria/classificação , Lagos/microbiologia , Filogenia , Técnicas de Tipagem Bacteriana , Composição de Bases , Betaproteobacteria/isolamento & purificação , China , DNA Bacteriano/genética , Ácidos Graxos/química , Fosfolipídeos/química , RNA Ribossômico 16S/genética , Análise de Sequência de DNA , Ubiquinona/química
5.
Int J Syst Evol Microbiol ; 70(10): 5394-5400, 2020 Oct.
Artigo em Inglês | MEDLINE | ID: mdl-33275546

RESUMO

Three yeast strains isolated from three flower samples were identified as representing two novel species of Teunia based on molecular phylogenetic analysis and phenotypic comparisons. Strains 12A8 and 21S4 with pink cream colonies and subglobose to globose cells had identical sequences in the ITS and LSU D1/D2 regions, which differed from strain X54 with cream colonies and ovoid to ellipsoidal cells by 6 nt substitutions (1 %) and 9 nt mismatches (1.5 %) in the D1/D2 domains and ITS region, respectively. They could also be distinguished from each other in assimilation of glucitol and salicin, growth at 28 °C and cell fibrillar appendages under scanning electron microscopy. The three strains differed from known species of Teunia by more than 8 nt (1.3 %) and 30 nt (5 %) in the D1/D2 domains and ITS region, respectively. Therefore, the names Teunia rudbeckiae sp. nov. (Holotype CGMCC 2.5840, Mycobank MB 835892) and Teunia rosae sp. nov. (Holotype CGMCC 2.5830, MycoBank MB 835891) are proposed to accommodate strain X54, and strains 12A8 and 21S4, respectively.


Assuntos
Basidiomycota/classificação , Flores/microbiologia , Filogenia , Basidiomycota/isolamento & purificação , China , DNA Fúngico/genética , DNA Espaçador Ribossômico/genética , Técnicas de Tipagem Micológica , Rosa/microbiologia , Rudbeckia/microbiologia , Análise de Sequência de DNA
6.
Int J Syst Evol Microbiol ; 70(8): 4496-4501, 2020 Aug.
Artigo em Inglês | MEDLINE | ID: mdl-32628104

RESUMO

Two yeast strains representing a novel species in the basidiomycetous yeast genus Naganishia were isolated from flowers of Sorbaria sorbifolia collected in Beijing Olympic Forest Park, PR China. Results of multi-gene phylogenetic analysis indicated that the two strains were closely related to the type strains of Naganishia bhutanensis (CBS 6294T) and Naganishia antarctica (CBS 7687T). However, the new isolates differed from N. bhutanensis CBS 6294T by 1.79 % sequence divergence in the D1/D2 domain (11 nt substitutions and three indels), and 2.42 % (15 nt differences and one indel) to N. antarctica CBS 7687T. In the ITS region, the new isolates showed 1.15 % divergence (7 nt substitutions and one indel) to N. bhutanensis CBS 6294T and 0.92 % divergence (5 nt substitutions and no indels) to N. antarctica CBS 7687T. A phylogenetic analysis employing the sequences of six genes (D1/D2 domain of large subunit rDNA, ITS, small subunit rDNA, two subunits of the RNA polymerase II and elongation factor-1α) indicated that the novel species belonged to the genus Naganishia and formed a well-supported clade with N. bhutanensis, N. antarctica and N. indica. Moreover, the two strains differed from their closest relatives by the ability to grow on distinct carbon and nitrogen sources and ability to grow at 30 °C. On the basis of these findings, we propose a novel species in the genus Naganishia (Filobasidiales), Naganishia floricola sp. nov. (holotype CGMCC 2.5856).


Assuntos
Basidiomycota/classificação , Flores/microbiologia , Filogenia , Rosaceae/microbiologia , Basidiomycota/isolamento & purificação , China , DNA Fúngico/genética , DNA Espaçador Ribossômico/genética , Técnicas de Tipagem Micológica , Análise de Sequência de DNA
7.
Int J Syst Evol Microbiol ; 70(2): 1093-1098, 2020 Feb.
Artigo em Inglês | MEDLINE | ID: mdl-31851602

RESUMO

An aerobic, Gram-stain-negative, yellowish, rod-shaped bacterium, designated DJ1R-1T, was isolated from water sample from a volcanic lake, located on Da Hinggan Ling Mountain, PR China. Growth of DJ1R-1T optimally occurred at pH 7.0, at 22-25 °C and with 0-0.5 % (w/v) NaCl concentration. Phylogenetic analysis of 16S rRNA gene sequences indicated that DJ1R-1T was clustered into the genus Polymorphobacter, and showed 96.5 %, 95.9 % and 95.6 % similarities to Polymorphobacter fuscus D40PT, Polymorphobacter multimanifer 262-7T and Polymorphobacter glacialis B555-2T, respectively. The predominant polar lipids were phosphatidylethanolamine, phosphatidylglycerol, one unidentified aminophospholipid, three unidentified aminolipids and one unidentified phospholipid. The major fatty acids were summed feature 8 (C18 : 1ω7c / C18 : 1ω6c, 40.0 %), summed feature 3 (C16 : 1ω7c / C16 : 1ω6c, 25.6 %) and C16 : 0 (13.7 %). The respiratory quinone was ubiquinone-10. The DNA G+C content was 65.0 % according to the genomic sequencing results. On the basis of the results of the phylogenetic analysis, physiological and biochemical properties comparisons, DJ1R-1T was proposed to represent a novel species of the genus Polymorphobacter, with the name Polymorphobacter arshaanensis. The type strain is DJ1R-1T (=CGMCC 1.13788T=KCTC 72014T).


Assuntos
Lagos/microbiologia , Filogenia , Sphingomonadaceae/classificação , Técnicas de Tipagem Bacteriana , Composição de Bases , China , DNA Bacteriano/genética , Ácidos Graxos/química , Fosfolipídeos/química , Pigmentação , RNA Ribossômico 16S/genética , Análise de Sequência de DNA , Sphingomonadaceae/isolamento & purificação , Ubiquinona/análogos & derivados , Ubiquinona/química
8.
Curr Microbiol ; 77(10): 3168-3173, 2020 Oct.
Artigo em Inglês | MEDLINE | ID: mdl-32514781

RESUMO

Sixty-two isolates among the 65 yeast strains isolated from Jiangxi province, China, were identified into 15 known species based on the sequence analysis of the D1/D2 domains of the LSU rRNA and ITS region. The other three strains, GaoanZ14, GaoanC57, and GaoanC191, isolated from tea-oil fruits, were identified as two undescribed species of Phaeotremella based on the multiple gene sequence analysis, physiological, and biochemical comparisons. Strains GaoanC57 and GaoanC191 had one substitution difference both in the D1/D2 domains of the LSU rRNA and ITS region. They formed a separate branch from the other Phaeotremella species in the D1/D2 and multiple genes trees, and differed from the known species by at least 10 nucleotide substitutions in the D1/D2 domains and more than 6% mismatches in the ITS region. The phylogenetic analysis indicated that those two strains represent a novel species of Phaeotremella, for which the names Phaeotremella camelliae sp. nov. (Holotype CGMCC 2.6141, Mycobank MB832699) is proposed. Only one strain, GaoanZ14, represents the other undescribed species of Phaeotremella, so it will be described in latter when more strains are found.


Assuntos
Frutas , Chá , China , DNA Fúngico , DNA Espaçador Ribossômico/genética , Técnicas de Tipagem Micológica , Filogenia , Análise de Sequência de DNA
9.
Artigo em Inglês | MEDLINE | ID: mdl-33720007

RESUMO

Eight apiculate strains isolated from Tibet, PR China, were identified as Hanseniaspora taiwanica and a novel species of Hanseniaspora based on the sequence analysis of the ITS region, the D1/D2 domains of the LSU rRNA and the translation elongation factor 1-a (TEF1) gene. Among them, four strains with identical sequences of D1/D2 and ITS formed a separate branch from the known Hanseniaspora species in the phylogenetic trees, and differed from the known species by at least 17 (3 %) nucleotide (nt) substitutions in the D1/D2 domains and more than 6 % substitutions and inserts/deletes in the ITS region. The phylogenetic analysis indicated that those four strains represent a novel species of Hanseniaspora, for which the names Hanseniaspora terricola sp. nov. (holotype CGMCC 2.6175T; MycoBank MB 834591) is proposed. The other four strains belonging to H. taiwanica produce spherical, void or fusiform ascospores, which differ from the original description that ascospores are absent.

10.
Int J Syst Evol Microbiol ; 69(8): 2565-2570, 2019 Aug.
Artigo em Inglês | MEDLINE | ID: mdl-31219417

RESUMO

Two strains of Gram-stain-negative, non-motile, aerobic, short-rod bacteria, designated as DRYC-M-16T and WMC-M-20, were isolated from sediment samples of two saline lakes in the Tibet of China. Both of the strains were catalase- and oxidase-positive. Optimal growth of strain DRYC-M-16T occurred at 20-25 °C, pH 7.0-7.5 and with 1.5 % (w/v) NaCl concentration. The analysis of 16S rRNA gene sequences indicated that strains DRYC-M-16T and WMC-M-20 belonged to the genus Tabrizicola, and showed the highest similarities to Tabrizicola aquatica KCTC 23724T (96.9 %) and Tabrizicola fusiformis KCTC 62105T (96.7 %). The DNA G+C contents of strains DRYC-M-16T and WMC-M-20 were 63.0 mol% and 62.9 mol%, respectively. The main polar lipids contained phosphatidylglycerol (PG), diphosphatidylglycerol (DPG), phosphatidylethanolamine (PE), phosphatidylcholine (PC) and several unidentified aminophospholipid (APL), aminolipid (AL), phospholipids (PL) and lipids (L). The predominant respiratory quinone was ubiquinone Q-10. The major cellular fatty acids of the two strains were iso-C18 : 0 and summed feature 8 (comprising C18 : 1 ω7c/C18 : 1 ω6c). Comprehensive analysis of the genotypic, physiological, biochemical and phenotypic characteristics indicated that the two strains should be classified as a novel species of the genus Tabrizicola, proposed as Tabrizicola sediminissp. nov., with the type strain DRYC-M-16T (=CGMCC 1.13881T=KCTC 72105 T).


Assuntos
Sedimentos Geológicos/microbiologia , Lagos/microbiologia , Filogenia , Rhodobacteraceae/classificação , Salinidade , Técnicas de Tipagem Bacteriana , Composição de Bases , DNA Bacteriano/genética , Ácidos Graxos/química , Fosfolipídeos/química , RNA Ribossômico 16S/genética , Rhodobacteraceae/isolamento & purificação , Análise de Sequência de DNA , Tibet , Ubiquinona/química
11.
Int J Syst Evol Microbiol ; 69(12): 3728-3739, 2019 Dec.
Artigo em Inglês | MEDLINE | ID: mdl-31693471

RESUMO

The Arxan-Chaihe volcanic field of the Da Hinggan mountains in north-East PR China hosts various typical crater lakes. In this study we performed a yeast diversity survey using water sampled from five crater lakes and a total of 122 yeast strains belonging to 33 species of 25 genera were isolated. Three strains, TFL1-L, TFL2B and ATC4C, were identified as three novel species belonging to the Tremellomycetes based on a multiple gene phylogeny and on the comparison of physiological data. A phylogenetic study employing the sequences of seven genes indicated that the new species were more related to three separated phylogenetic lineages of the Tremellomycetes and their closest relatives were Heterocephalacria arrabidensis, Phaeotremella skinneri and Solicoccozyma keelungensis. The divergence values of the D1/D2 domain of LSU sequences of strains TFL1-L, TFL2B and ATC4C from H. arrabidensis CBS 8678T, P. skinneri CBS 5029T and S. keelungensisSN-82T were 4.8,3.4,2.1 %, respectively. The divergence values of the sequences of ITS regions between strains TFL1-L, TFL2B and ATC4C and their close relatives (H. arrabidensis, P. skinneri and S. keelungensis) were 16.1, 5.9 and 8.1  %, respectively. Moreover, the three strains differed from their phylogenetic neighbours by the ability to grow on distinct carbon and nitrogen sources. On the basis of these findings, it is suggested that these strains represent three novel species for which the names Heterocephalacria sinensis sp. nov. (holotype CGMCC 2.5595), Phaeotremella lacus sp. nov. (holotype CGMCC 2.5580) and Solicoccozyma aquatica sp. nov. (holotype CGMCC 2.5574) are proposed.


Assuntos
Basidiomycota/classificação , Lagos/microbiologia , Filogenia , Basidiomycota/isolamento & purificação , China , DNA Fúngico/genética , DNA Espaçador Ribossômico/genética , Técnicas de Tipagem Micológica , Análise de Sequência de DNA
12.
Fish Shellfish Immunol ; 86: 999-1008, 2019 Mar.
Artigo em Inglês | MEDLINE | ID: mdl-30590166

RESUMO

Streptococcus agalactiae infections are becoming an increasing problem in aquaculture because of significant morbidity and mortality, which restricts the healthy development of tilapia aquaculture. To seek safe and effective prevention measures, a Bacillus subtilis GC5 surface displayed vaccine was prepared and applied orally in tilapia. The study first showed that recombinant spores can engraft in the tilapia intestine. Then, the effect of protection and the immune responses were evaluated. The results of ELISA showed that Sip-specific antibody in the sera of GC5-Sip-immunized fish can be detected after the first oral administration when compared to the phosphate buffer saline (PBS) control group, and the levels of specific IgM gradually strengthened with boosting, so does the specific antibody against bacteria, proving that humoral immunity was induced. Quantitative real-time PCR (qRT-PCR) results showed that the immune-related gene expression of the gut and spleen exhibited a different rising trend in the GC5-Sip group, revealing that innate immune response and local as well as systemic cellular immunity were induced. The outcome of fish immunized with GC5-Sip spores provided a relative percent survival (RPS) of 41.7% against S. agalactiae and GC5 group had an RPS of 24.2%, indicating that GC5-Sip was safe and effective in protecting tilapia against bacterial infection. Our study demonstrated that the oral administration of B. subtilis spores expressing Sip could cause an effective immune response and offer good resistance to bacterial infection. Our work may lead to the development of new ideas for immunoprophylaxis against S. agalactiae infection.


Assuntos
Doenças dos Peixes/prevenção & controle , Vacinas Estreptocócicas/imunologia , Streptococcus agalactiae/imunologia , Tilápia , Administração Oral , Animais , Bacillus subtilis/metabolismo , Proteínas de Bactérias/imunologia , Doenças dos Peixes/microbiologia , Esporos Bacterianos , Infecções Estreptocócicas/prevenção & controle , Vacinas Estreptocócicas/administração & dosagem , Vacinação
13.
Curr Microbiol ; 76(12): 1537-1544, 2019 Dec.
Artigo em Inglês | MEDLINE | ID: mdl-31555854

RESUMO

One novel ascomycetous yeast strain TF5-16-2 was isolated from water samples of Tuofengling crater lake located in Da Hinggan Ling Mountain, in the Inner Mongolia province of China. Morphological, physiological characteristics, as well as phylogenetic analyses of D1/D2 domains of the large subunit rRNA (LSU), ITS region, small subunit rRNA (SSU), and elongation factor-1α (EF-1α) were performed and finally confirmed the phylogenetic placement of strain TF5-16-2 in the genus Wickerhamomyces. Sequences analysis revealed that strain TF5-16-2 differed from its most closely related phylogenetic neighbors 'Candida' silvicultrix CBS 6269T and Wickerhamomyces anomalus CBS 5759T by 8.0% (including 2.3% gaps), 8.5% (including 2.4% gaps) divergences in D1/D2 domains of LSU, and 11% (including 4.3% gaps) and 13% (including 4.4% gaps) divergences in ITS region, respectively. As the considerable sequence divergence and distinguishable physiological characteristics, strain TF5-16-2 was proposed as a new species of the genus Wickerhamomyces, with the name Wickerhamomyces kurtzmanii sp. nov. (holotype = CGMCC 2.5597, Mycobank number is MB829959).


Assuntos
Lagos/microbiologia , Saccharomycetales/isolamento & purificação , China , DNA Fúngico/genética , DNA Espaçador Ribossômico/genética , Proteínas Fúngicas/genética , Técnicas de Tipagem Micológica , Fator 1 de Elongação de Peptídeos/genética , Filogenia , Saccharomycetales/classificação , Saccharomycetales/genética
14.
Zhongguo Yi Xue Ke Xue Yuan Xue Bao ; 41(3): 396-401, 2019 Jun 30.
Artigo em Zh | MEDLINE | ID: mdl-31282336

RESUMO

Human genetic resources are valuable for life science research and pharmaceutical industry.Competitions for human genetic resources and the relevant techniques and industries have increasingly become intense among countries with the the implementation of precision medicine strategy and the maturity of gene editing technology.In the context of scientific progress and efficiency,the Organisation for Economic Co-operation and Development,the most important international economic organization,has proposed solutions to technological development and research paradigm changes from the perspective of national and global public interests.The United States,Japan,the United Kingdom,and some other developed countries have also released their policies and guidelines on the sharing of genetic resource data.In this article we analyzed these policies and guidelines,with an attempt to further improve the administration of human genetic resource sharing in China and promote the legal sharing and effective use of these resources.


Assuntos
Genética Humana , Disseminação de Informação , China , Guias como Assunto , Humanos
15.
Zhongguo Zhong Yao Za Zhi ; 43(17): 3582-3588, 2018 Sep.
Artigo em Zh | MEDLINE | ID: mdl-30347929

RESUMO

To explore potent anticancer agent based on artemisinin scaffold, a series of 10-O-phenyl ethers derivatives containing dihydropyrazolyl or pyrazolyl moiety have been designed and synthesized. Their structures were determined by LC-MS and ¹H-NMR date. Inhibitory effects of the target compounds in human breast cancer MCF-7, MCF/Adr, MDA-MB-231 cells and prostate cell line PC-3 were determined by MTT assay. Those derivatives displayed good antiproliferative activity against the tested cancer cells. Particularly, target compounds exhibited significant cytotoxicity against drug-resistance cells MCF/Adr, which was worthy for further investigation.


Assuntos
Antineoplásicos/síntese química , Antineoplásicos/farmacologia , Artemisininas/química , Éteres Fenílicos/síntese química , Éteres Fenílicos/farmacologia , Linhagem Celular Tumoral , Proliferação de Células , Desenho de Fármacos , Ensaios de Seleção de Medicamentos Antitumorais , Humanos , Relação Estrutura-Atividade
16.
Int J Syst Evol Microbiol ; 67(1): 108-112, 2017 Jan.
Artigo em Inglês | MEDLINE | ID: mdl-27902194

RESUMO

Two Gram-stain-negative, obligately aerobic, non-motile, rod-shaped bacterial strains, designated SP3T and SP38, were isolated from a cold-water lake in the west of China. A polyphasic taxonomic study was performed for the strains. Alignment of 16S rRNA gene sequences indicated that strains SP3T and SP38 were associated with the genus Flavobacterium and were most closely related to Flavobacterium lacus NP180T (96.4 % sequence similarity), Flavobacterium ponti GSW-R14T (95.6 %) and Flavobacterium yanchengense hgT (95.3 %). The genomic DNA G+C contents of strains SP3T and SP38 were 34.9 and 34.6 mol%, respectively. The major fatty acids were iso-C15 : 0, iso-C15 : 1 G, summed feature 9 (iso-C17 : 1ω9c and/or 10-methyl C16 : 0), iso-C17 : 0 3-OH and iso-C15 : 0 3-OH. The unique respiratory quinone was menaquinone 6 (MK-6). The polar lipid profile consisted of phosphatidylethanolamine, one unidentified aminolipid and several unidentified polar lipids. Based on physiological, biochemical and phylogenetic data for these isolates, it was confirmed that strains SP3T and SP38 were affiliated to the genus Flavobacterium and represented a novel species, for which the name Flavobacterium orientale sp. nov. is proposed. The type strain is SP3T (=CGMCC 1.12506T=NBRC 109717T).


Assuntos
Flavobacterium/classificação , Lagos/microbiologia , Filogenia , Técnicas de Tipagem Bacteriana , Composição de Bases , China , DNA Bacteriano/genética , Ácidos Graxos/química , Flavobacterium/genética , Flavobacterium/isolamento & purificação , Fosfatidiletanolaminas/química , RNA Ribossômico 16S/genética , Análise de Sequência de DNA , Vitamina K 2/análogos & derivados , Vitamina K 2/química
17.
Small ; 12(15): 2092-8, 2016 Apr.
Artigo em Inglês | MEDLINE | ID: mdl-26938293

RESUMO

Metallic nanostructures are often used to enhance photoluminescence of nanomaterials based on local field enhancement with plasmons at metal surfaces. Here upconversion luminescence (UCL) enhancement of submicrometer-size NaGd0.3 Yb0.7 F4 :Er particles in cap-like metal cavities, formed by deposition of a silver film on the particles dispersed on glass substrates, is studied. UCL of the particles is shown to be influenced by not only the plasmon-enhanced local field but also the cavity modes. By varying the cavity size and location of the particles in the cavities, fluctuant variations of the UCL enhancement and electronic depopulation rate are observed in experiments. Typically, a maximum of 12-fold enhancement of the UCL intensity is obtained. Combining the results with numerical simulations, the phenomenon is ascribed to effects of metal quenching, plasmonic field enhancement, and the cavity modes for the excitation and emission photons. Finally it is verified that, for the cap-like submicrometer metal cavities, allocating the particles at the open mouths of the cavities is more advantageous to obtaining stronger enhancements of the particles' UCL. And the demonstrated structure is also convenient to fabricate for applications, e.g., in solar cells.

18.
Int J Syst Evol Microbiol ; 66(8): 2819-2824, 2016 Aug.
Artigo em Inglês | MEDLINE | ID: mdl-27045957

RESUMO

Three Gram-stain negative, aerobic, non-motile, rod-shaped bacterial strains, Y1R2-4T, Y3R2-3 and DC2N1-10T, isolated from two crater lakes of the Daxinganling Mountains, northern China, were studied to determine their taxonomic position. They grew at 4-30 °C (optimally at 20-25 °C), at pH 6.0-7.5 (optimally at pH 7.0) and in the presence of 0-0.5 % (w/v) NaCl. On the basis of 16S rRNA gene sequence analysis, these strains showed 95.3-96.6 % similarity to members of the genus Pseudorhodobacter, including Pseudorhodobacter ferrugineus DSM 5888T, Pseudorhodobacter wandonensis WT-MW11T, Pseudorhodobacter antarcticus ZS3-33T and Pseudorhodobacter aquimaris HDW-19T. All strains contained Q-10 as the predominant ubiquinone and C18 : 1ω7c as the major fatty acid. The main polar lipids for strains Y1R2-4T and Y3R2-3 were phosphatidylglycerol, phosphatidylcholine, one unidentified aminophospholipid, one unidentified aminolipid, three unidentified phospholipids and two unidentified lipids, and those for strain DC2N1-10T were phosphatidylglycerol, phosphatidylcholine, one unidentified aminophospholipid, one unidentified aminolipid, one unidentified phospholipid and several unidentified lipids. The DNA G+C contents of strains Y1R2-4T, Y3R2-3 and DC2N1-10T were 61.9, 61.0 and 60.0 mol%, respectively. In addition, strain Y1R2-4T shared less than 50 % DNA-DNA relatedness to strain DC2N1-10T. Based on these differences in genetic, physiological and chemotaxonomic properties, strains Y1R2-4T, Y3R2-3 and DC2N1-10T were considered to represent two novel species of the genus Pseudorhodobacter, for which the names Pseudorhodobacter sinensis sp. nov. (type strain Y1R2-4T=CGMCC1.14435T=KCTC 52039T) and Pseudorhodobacter aquaticus sp. nov. (type strain DC2N1-10T=CGMCC1.14433T=KCTC 52040T) are proposed.


Assuntos
Lagos/microbiologia , Filogenia , Rhodobacteraceae/classificação , Técnicas de Tipagem Bacteriana , Composição de Bases , China , DNA Bacteriano/genética , Ácidos Graxos/química , Fosfolipídeos/química , RNA Ribossômico 16S/genética , Rhodobacteraceae/genética , Rhodobacteraceae/isolamento & purificação , Análise de Sequência de DNA , Ubiquinona/análogos & derivados , Ubiquinona/química
20.
Antonie Van Leeuwenhoek ; 109(7): 965-70, 2016 Jul.
Artigo em Inglês | MEDLINE | ID: mdl-27071623

RESUMO

Four strains, CB 266(T), CB 272, XZ 44D1(T) and XZ 49D2, isolated from shrub plant leaves in China were identified as two novel species of the genus Ballistosporomyces by the sequence analysis of the small subunit of ribosomal RNA (SSU rRNA), the D1/D2 domains of the large subunit of rRNA (LSU rRNA) and internal transcribed spacer (ITS) + 5.8S rRNA region, and physiological comparisons. Ballistosporomyces changbaiensis sp. nov. (type strain CB 266(T) = CGMCC 2.02298(T) = CBS 10124(T), Mycobank number MB 815700) and Ballistosporomyces bomiensis sp. nov. (type strain XZ 44D1(T) = CGMCC 2.02661(T) = CBS 12512(T), Mycobank number MB 815701) are proposed to accommodate these two new species.


Assuntos
Basidiomycota/classificação , Basidiomycota/isolamento & purificação , Folhas de Planta/microbiologia , Rhododendron/microbiologia , Basidiomycota/genética , Basidiomycota/fisiologia , China , Análise por Conglomerados , DNA Fúngico/genética , DNA Ribossômico/genética , DNA Espaçador Ribossômico , Filogenia , RNA Fúngico/genética , RNA Ribossômico/genética , RNA Ribossômico 5,8S/genética , Análise de Sequência de DNA
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