Your browser doesn't support javascript.
loading
Mostrar: 20 | 50 | 100
Resultados 1 - 20 de 23
Filtrar
Mais filtros

Bases de dados
País/Região como assunto
Tipo de documento
Intervalo de ano de publicação
1.
Genomics ; 115(2): 110573, 2023 03.
Artigo em Inglês | MEDLINE | ID: mdl-36746218

RESUMO

Considerable studies have given convincing evidence of a forefront position for vascular aging in preventing cardiovascular disease. Various functions of Long non-coding RNAs (lncRNAs) are becoming increasingly distinct in aging-related diseases. This study aims at a better insight into the expression profile and mechanisms of lncRNAs in vascular senescence. High-throughput sequencing was used to detect the differential expression (DE) of lncRNAs and mRNAs in the aorta of 96 W and 8 W-old mice, while 1423 lncRNAs and 80 mRNAs were differentially expressed. By performing GO and KEGG enrichment analysis, we found that DE lncRNAs were mainly involved in purine metabolism and cGMP-PKG signaling pathways. In addition, a co-expression functional network of DE lncRNAs and DE mRNAs was constructed, and ENSMUST00000218874 could interact with 41 DE mRNAs, suggesting that it may play an essential role in vascular senescence. This study reveals DE lncRNAs in naturally aging vascular, which may provide new ideas and targets for aging-related cardiovascular diseases.


Assuntos
RNA Longo não Codificante , Transcriptoma , Camundongos , Animais , RNA Longo não Codificante/genética , RNA Longo não Codificante/metabolismo , Aorta/metabolismo , Transdução de Sinais , RNA Mensageiro/genética , RNA Mensageiro/metabolismo , Perfilação da Expressão Gênica , Redes Reguladoras de Genes
2.
Br J Nutr ; 123(4): 428-436, 2020 02 28.
Artigo em Inglês | MEDLINE | ID: mdl-31760957

RESUMO

The aim of the present study was to explore the influence of tea consumption on diabetes mellitus in the Chinese population. This multi-centre, cross-sectional study was conducted in eight sites from south, east, north, west and middle regions in China by enrolling 12 017 subjects aged 20-70 years. Socio-demographic and general information was collected by a standardised questionnaire. A standard procedure was used to measure anthropometric characteristics and to obtain blood samples. The diagnosis of diabetes was determined using a standard 75-g oral glucose tolerance test. In the final analysis, 10 825 participants were included and multiple logistic models and interaction effect analysis were applied for assessing the association between tea drinking with diabetes. Compared with non-tea drinkers, the multivariable-adjusted OR for newly diagnosed diabetes were 0·80 (95 % CI 0·67, 0·97), 0·88 (95 % CI 0·71, 1·09) and 0·86 (95 % CI 0·67, 1·11) for daily tea drinkers, occasional tea drinkers and seldom tea drinkers, respectively. Furthermore, drinking tea daily was related to decreased risk of diabetes in females by 32 %, elderly (>45 years) by 24 % and obese (BMI > 30 kg/m2) by 34 %. Moreover, drinking dark tea was associated with reduced risk of diabetes by 45 % (OR 0·55; 95 % CI 0·42, 0·72; P < 0·01). The results imply that drinking tea daily was negatively related to risk of diabetes in female, elderly and obese people. In addition, drinking dark tea was associated with decreased risk of type 2 diabetes mellitus.


Assuntos
Diabetes Mellitus Tipo 2/epidemiologia , Dieta/métodos , Comportamento de Ingestão de Líquido/fisiologia , Chá , Adulto , Idoso , China/epidemiologia , Estudos Transversais , Diabetes Mellitus Tipo 2/etiologia , Feminino , Teste de Tolerância a Glucose , Humanos , Modelos Logísticos , Masculino , Pessoa de Meia-Idade , Fatores de Risco , Adulto Jovem
3.
Cell Mol Biol (Noisy-le-grand) ; 65(2): 18-27, 2019 Feb 28.
Artigo em Inglês | MEDLINE | ID: mdl-30860467

RESUMO

In this study, the elite maize inbred line (Zheng683-1) was used as a recurrent parent and the four maize inbred lines (ZPH1388, ZPH5, Dong 237 and Chang 7-2) were used as donor parents. The four F1 hybrids were produced by crossing between them and were continued backcrossing to the recurrent parent to produce four BC3F1s. The BC3F1 were pollinated by selfing four generations to generate the recombinant inbred lines (BC3F5) that showed variation in plant height, ear height, leaf angle. There were 53 lines for Zheng683-1 x ZPH1388, 53 lines for Zheng683-1 x ZPH5, 48 lines for Zheng683-1 x Dong237 and 61 lines for Zheng683-1 x Chang 7-2. The four populations were genotyped by using SNP marker and identified the QTLs of targeted traits by using QTL IciMapping V4.1 software and stepwise regression analysis. The main results are as follows:1. 19 additive QTLs and 2 dominant QTLs about plant height were detected in four introgression lines, and 7, 4, 5, 5 QTLs related plant height in ZPH1388-IL, ZPH5-IL, Dong237-ILand Chang7-2-IL. Among the 21 plant height QTLs, the largest contribution to phenotypic variation was QTLqPHa12 from Dong237-IL population, which evaluated 43.44% of the phenotypic variation of plant height . Followed by qPHa3 from ZPH1388-IL, the phenotypic contribution rate was 20% 2. Sixteen QTLs related ear height were detected in the population of the 4 introgression lines, of which there were 15 additive and 1 dominant QTLs. In addition, 9, 3, and 4 QTLs were detected in ZPH1388-IL, ZPH5-IL and Dong237-IL respectively. Among the 16 ear height QTLs, the largest contribution to phenotypic variation was QTL (qEHa1) from the ZPH1388 IL, which recorded the phenotypic variation of ear height by 26.01%. Next the phenotype contribution rates were 22.05% and 21.46%, respectively for qEHa13 and qEHa15 from Dong237-IL. Fourteen QTLs related leaf angle was detected in the population of the introgression lines, of which there were 5 additive QTLs and 9 dominant QTLs. Moreover, 2, 9, and 3 QTLs were detected in ZPH1388-IL, ZPH5-IL, Dong237-IL, respectively. Among the 14 leaf angle QTLs, the largest contribution to phenotypic variation was QTL (qLAa4) from the Dong237-IL then qLAa3 from ZPH5-IL, detecting the phenotypic variation of leaf angle of 28.56% and 24.08%,  respectively.The results showed that the QTL locus was characterized by uneven chromosome distribution. The chromosome 1, 2, 5, and 7 are the regions with the QTL concentrated distribution of plant type traits. The QTL of plant type also showed QTL concentrated distribution in some regions of chromosomes. For example, there are three QTLs about plant height and ear height in the region of chromosome bin1.02, three QTLs about plant and ear heights, as well as leaf angle in the region of chromosome bin 2.02. These areas are QTL enrichment region (or the hot spots) of the pleiotropic gene loci related the plant type and ear traits.


Assuntos
Mapeamento Cromossômico , Polimorfismo de Nucleotídeo Único/genética , Locos de Características Quantitativas/genética , Zea mays/genética , Alelos , Cromossomos de Plantas/genética , Marcadores Genéticos , Endogamia , Padrões de Herança/genética , Fenótipo , Característica Quantitativa Herdável , Zea mays/anatomia & histologia
4.
Biochemistry ; 57(5): 817-826, 2018 02 06.
Artigo em Inglês | MEDLINE | ID: mdl-29215266

RESUMO

Human hepatic cytochromes P450 (CYP) are integral to xenobiotic metabolism. CYP2B6 is a major catalyst of biotransformation of environmental toxicants, including polybrominated diphenyl ethers (PBDEs). CYP2B substrates tend to contain halogen atoms, but the biochemical basis for this selectivity and for species specific determinants of metabolism has not been identified. Spectral binding titrations and inhibition studies were performed to investigate interactions of rat CYP2B1, rabbit CYP2B4, and CYP2B6 with a series of phenoxyaniline (POA) congeners that are analogues of PBDEs. For most congeners, there was a <3-fold difference between the spectral binding constants (KS) and IC50 values. In contrast, large discrepancies between these values were observed for POA and 3-chloro-4-phenoxyaniline. CYP2B1 was the enzyme most sensitive to POA congeners, so the Val-363 residue from that enzyme was introduced into CYP2B4 or CYP2B6. This substitution partially altered the protein-ligand interaction profiles to make them more similar to that of CYP2B1. Addition of cytochrome P450 oxidoreductase (POR) to titrations of CYP2B6 with POA or 2'4'5'TCPOA decreased the affinity of both ligands for the enzyme. Addition of cytochrome b5 to a recombinant enzyme system containing POR and CYP2B6 increased the POA IC50 value and decreased the 2'4'5'TCPOA IC50 value. Overall, the inconsistency between KS and IC50 values for POA versus 2'4'5'TCPOA is largely due to the effects of redox partner binding. These results provide insight into the biochemical basis of binding of diphenyl ethers to human CYP2B6 and changes in CYP2B6-mediated metabolism that are dependent on POA congener and redox partner identity.


Assuntos
Hidrocarboneto de Aril Hidroxilases/antagonistas & inibidores , Citocromo P-450 CYP2B1/antagonistas & inibidores , Citocromo P-450 CYP2B6/efeitos dos fármacos , Inibidores das Enzimas do Citocromo P-450/farmacologia , Éteres Difenil Halogenados/farmacologia , Alquilação/efeitos dos fármacos , Substituição de Aminoácidos , Compostos de Anilina , Animais , Hidrocarboneto de Aril Hidroxilases/química , Hidrocarboneto de Aril Hidroxilases/genética , Hidrocarboneto de Aril Hidroxilases/metabolismo , Derivados de Benzeno/farmacologia , Citocromo P-450 CYP2B1/química , Citocromo P-450 CYP2B1/genética , Citocromo P-450 CYP2B1/metabolismo , Citocromo P-450 CYP2B6/química , Citocromo P-450 CYP2B6/genética , Citocromo P-450 CYP2B6/metabolismo , Inibidores do Citocromo P-450 CYP2B6/metabolismo , Inibidores do Citocromo P-450 CYP2B6/farmacologia , Inibidores das Enzimas do Citocromo P-450/metabolismo , Família 2 do Citocromo P450/antagonistas & inibidores , Família 2 do Citocromo P450/química , Família 2 do Citocromo P450/genética , Família 2 do Citocromo P450/metabolismo , Citocromos b5/metabolismo , Poluentes Ambientais/metabolismo , Éteres Difenil Halogenados/metabolismo , Humanos , Hidrocarbonetos Halogenados/metabolismo , Concentração Inibidora 50 , Estrutura Molecular , Mutagênese Sítio-Dirigida , NADPH Oxidases/metabolismo , Oxirredução , Coelhos , Ratos , Proteínas Recombinantes/metabolismo , Relação Estrutura-Atividade , Especificidade por Substrato
5.
Biochemistry ; 56(16): 2238-2246, 2017 04 25.
Artigo em Inglês | MEDLINE | ID: mdl-28375626

RESUMO

On the basis of recent functional and structural characterization of cytochromes P450 2B from the desert woodrat (Neotoma lepida), the 7-alkoxycoumarin and 7-alkoxy-4-(trifluoromethyl)coumarin O-dealkylation profiles of CYP2B35 and CYP2B37 were re-engineered. Point mutants interchanging residues at seven positions in the enzyme active sites were created and purified from an Escherichia coli expression system. In screens for O-dealkylation activity, wild-type CYP2B35 metabolized long-chain 7-alkoxycoumarins but not 7-alkoxy-4-(trifluoromethyl)coumarins or short-chain 7-alkoxycoumarins. Wild-type CYP2B37 metabolized short-chain substrates from both series of compounds. CYP2B35 A367V showed maximal activity with 7-butoxycoumarin as opposed to 7-heptoxycoumarin in the parental enzyme, and CYP2B35 A363I/A367V produced an activity profile like that generated by CYP2B37. CYP2B35 A363I/A367V/I477F showed 7-ethoxycoumarin and 7-ethoxy-4-(trifluoromethyl)coumarin O-dealkylation rates similar to those of CYP2B37 and higher than those of the double mutant. A CYP2B35 septuple mutant retained a CYP2B37-like activity profile. In contrast, the CYP2B37 septuple mutant produced very low rates of O-dealkylation of all substrates. As mutating residue 108 in either enzyme was detrimental, this change was removed from both septuple mutants. Remarkably, the CYP2B35 sextuple mutant produced an activity profile that was a hybrid of that of CYP2B35 and CYP2B37, whereas the CYP2B37 sextuple mutant had almost no O-dealkylation activity. Docking of 7-substituted coumarin derivatives into a model of the CYP2B35 sextuple mutant based on a previous crystal structure of the 4-(4-chlorophenyl)imidazole wild-type complex revealed how the mutant can exhibit activities of both CYP2B35 and CYP2B37.


Assuntos
Cumarínicos/metabolismo , Sistema Enzimático do Citocromo P-450/metabolismo , Alquilação , Animais , Sistema Enzimático do Citocromo P-450/química , Sistema Enzimático do Citocromo P-450/genética , Sistema Enzimático do Citocromo P-450/isolamento & purificação , Mutagênese Sítio-Dirigida , Sigmodontinae
6.
Biochemistry ; 55(13): 1997-2007, 2016 Apr 05.
Artigo em Inglês | MEDLINE | ID: mdl-26982502

RESUMO

Using a combined structural and biochemical approach, the functional importance of a recently described peripheral pocket bounded by the E-, F-, G-, and I-helices in CYP2B4 and 2B6 was probed. Three series of 4-substituted-7-alkoxycoumarin derivatives with -H, -CH3, or -CF3 at the 4 position of the coumarin core were used initially to monitor functional differences between CYP2B4 and 2B6. 7-Ethoxy-4-(trifluoromethyl)coumarin (7-EFC) displayed the highest catalytic efficiency among these substrates. Mutants were made to alter side-chain polarity (V/E194Q) or bulk (F/Y244W) to alter access to the peripheral pocket. Modest increases in catalytic efficiency of 7-EFC O-deethylation by the mutants were magnified considerably by chlorination or bromination of the substrate ethoxy chain. A structure of CYP2B6 Y244W in complex with (+)-α-pinene was solved at 2.2 Å and showed no CYMAL-5 in the peripheral pocket. A ligand free structure of CYP2B4 F244W was solved at 3.0 Å with CYMAL-5 in the peripheral pocket. In both instances, comparison of the respective wild-type and mutant CYP2B enzymes revealed that CYMAL-5 occupancy of the peripheral pocket had little effect on the topology of active site residue side-chains, despite the fact that the peripheral pocket and active site are located on opposite sides of the I-helix. Analysis of available CYP2B structures suggest that the effect of the amino acid substitutions within the peripheral pocket derive from altered interactions between the F and G helices.


Assuntos
Hidrocarboneto de Aril Hidroxilases/metabolismo , Cumarínicos/metabolismo , Citocromo P-450 CYP2B6/metabolismo , Modelos Moleculares , Alquilação , Substituição de Aminoácidos , Hidrocarboneto de Aril Hidroxilases/química , Hidrocarboneto de Aril Hidroxilases/genética , Sítios de Ligação , Domínio Catalítico , Cumarínicos/química , Citocromo P-450 CYP2B6/química , Citocromo P-450 CYP2B6/genética , Família 2 do Citocromo P450 , Halogenação , Humanos , Cinética , Ligantes , Conformação Molecular , Estrutura Molecular , Mutagênese Sítio-Dirigida , Mutação , Conformação Proteica , Estrutura Secundária de Proteína , Proteínas Recombinantes/química , Proteínas Recombinantes/metabolismo , Especificidade por Substrato
7.
Mol Pharmacol ; 89(4): 435-45, 2016 Apr.
Artigo em Inglês | MEDLINE | ID: mdl-26826176

RESUMO

Crystal structures of CYP2B35 and CYP2B37 from the desert woodrat were solved in complex with 4-(4-chlorophenyl)imidazole (4-CPI). The closed conformation of CYP2B35 contained two molecules of 4-CPI within the active site, whereas the CYP2B37 structure demonstrated an open conformation with three 4-CPI molecules, one within the active site and the other two in the substrate access channel. To probe structure-function relationships of CYP2B35, CYP2B37, and the related CYP2B36, we tested the O-dealkylation of three series of related substrates-namely, 7-alkoxycoumarins, 7-alkoxy-4-(trifluoromethyl)coumarins, and 7-alkoxy-4-methylcoumarins-with a C1-C7 side chain. CYP2B35 showed the highest catalytic efficiency (kcat/KM) with 7-heptoxycoumarin as a substrate, followed by 7-hexoxycoumarin. In contrast, CYP2B37 showed the highest catalytic efficiency with 7-ethoxy-4-(trifluoromethyl)coumarin (7-EFC), followed by 7-methoxy-4-(trifluoromethyl)coumarin (7-MFC). CYP2B35 had no dealkylation activity with 7-MFC or 7-EFC. Furthermore, the new CYP2B-4-CPI-bound structures were used as templates for docking the 7-substituted coumarin derivatives, which revealed orientations consistent with the functional studies. In addition, the observation of multiple -Cl and -NH-π interactions of 4-CPI with the aromatic side chains in the CYP2B35 and CYP2B37 structures provides insight into the influence of such functional groups on CYP2B ligand binding affinity and specificity. To conclude, structural, computational, and functional analysis revealed striking differences between the active sites of CYP2B35 and CYP2B37 that will aid in the elucidation of new structure-activity relationships.


Assuntos
Cumarínicos/química , Citocromo P-450 CYP2B1/química , Imidazóis/química , Modelos Moleculares , Xenobióticos/química , Animais , Sítios de Ligação/fisiologia , Cumarínicos/metabolismo , Cristalografia por Raios X , Citocromo P-450 CYP2B1/metabolismo , Imidazóis/metabolismo , Estrutura Secundária de Proteína , Ratos , Relação Estrutura-Atividade , Xenobióticos/metabolismo
8.
Mol Pharmacol ; 87(4): 649-59, 2015 Apr.
Artigo em Inglês | MEDLINE | ID: mdl-25585967

RESUMO

X-ray crystal structures of complexes of cytochromes CYP2B6 and CYP2A6 with the monoterpene sabinene revealed two distinct binding modes in the active sites. In CYP2B6, sabinene positioned itself with the putative oxidation site located closer to the heme iron. In contrast, sabinene was found in an alternate conformation in the more compact CYP2A6, where the larger hydrophobic side chains resulted in a significantly reduced active-site cavity. Furthermore, results from isothermal titration calorimetry indicated a much more substantial contribution of favorable enthalpy to sabinene binding to CYP2B6 as opposed to CYP2A6, consistent with the previous observations with (+)-α-pinene. Structural analysis of CYP2B6 complexes with sabinene and the structurally similar (3)-carene and comparison with previously solved structures revealed how the movement of the F206 side chain influences the volume of the binding pocket. In addition, retrospective analysis of prior structures revealed that ligands containing -Cl and -NH functional groups adopted a distinct orientation in the CYP2B active site compared with other ligands. This binding mode may reflect the formation of Cl-π or NH-π bonds with aromatic rings in the active site, which serve as important contributors to protein-ligand binding affinity and specificity. Overall, the findings from multiple techniques illustrate how drugs metabolizing CYP2B6 and CYP2A6 handle a common hydrocarbon found in the environment. The study also provides insight into the role of specific functional groups of the ligand that may influence the binding to CYP2B6.


Assuntos
Citocromo P-450 CYP2A6/química , Citocromo P-450 CYP2B6/química , Monoterpenos/química , Compostos Orgânicos Voláteis/química , Monoterpenos Bicíclicos , Humanos , Modelos Moleculares , Ligação Proteica , Conformação Proteica , Termodinâmica
9.
Arch Biochem Biophys ; 584: 61-9, 2015 Oct 15.
Artigo em Inglês | MEDLINE | ID: mdl-26319176

RESUMO

The functional importance of a peripheral pocket found in previously published X-ray crystal structures of CYP2B4 and CYP2B6 was probed using a biophysical approach. Introduction of tryptophan within the pocket of CYP2B4 at F202 or I241 leads to marked impairment of 7-ethoxy-4-(trifluoromethyl)coumarin (7-EFC) or 7-benzyloxyresorufin O-dealkylation efficiency; a similar substitution at F195, near the surface access to the pocket, does not affect these activities. The analogous CYP2B6 F202W mutant is inactive in the 7-EFC O-dealkylation assay. The stoichiometry of 7-EFC deethylation suggested that the decreased activity of F202W and I241W in CYP2B4 and lack of activity of F202W in CYP2B6 coincided with a sharp increase in the flux of reducing equivalents through the oxidase shunt to produce excess water. The results indicate that the chemical identity of residues within this peripheral pocket, but not at the mouth of the pocket, is important in substrate turnover and redox coupling, likely through effects on active site topology.


Assuntos
Hidrocarboneto de Aril Hidroxilases/química , Cumarínicos/química , Citocromo P-450 CYP2B6/química , Substituição de Aminoácidos , Hidrocarboneto de Aril Hidroxilases/genética , Hidrocarboneto de Aril Hidroxilases/metabolismo , Domínio Catalítico , Citocromo P-450 CYP2B6/genética , Citocromo P-450 CYP2B6/metabolismo , Família 2 do Citocromo P450 , Humanos , Mutação de Sentido Incorreto , Oxirredução
10.
Pharmazie ; 70(7): 446-51, 2015 Jul.
Artigo em Inglês | MEDLINE | ID: mdl-26373204

RESUMO

Fifteen 2-substituted ethenesulfonic acid ester derivatives were designed, synthesized, and evaluated for the inhibitory activities against protein tyrosine phosphatase 1B (PTP1B) and T-Cell protein tyrosine phosphatase (TCPTP). The structural activity relationship (SAR) of these compounds are discussed to clarify the impact of the linker and the optimized tail on the inhibitory activity of PTP1B and selectivity over TCPTP. Most of the compounds exhibit excellent inhibitory activities against PTP1B with IC50 values of 1.5-8.9 µM. SAR analysis reveal that the substituents at the hydrophobic tail significantly alter the inhibitory activity against PTP1 B and selectivity over TCPTP, e.g. compound 5d showed excellent inhibitory activity to PTP1B with IC50 = 7.8 µM, and -6-fold selectivity over TCPTP. Combined with our previous findings, we confirm that the linker length and the substituted hydrophobic tail have decisive influence on the PTP1B inhibitory activity and selectivity.


Assuntos
Inibidores Enzimáticos/síntese química , Inibidores Enzimáticos/farmacologia , Proteína Tirosina Fosfatase não Receptora Tipo 1/antagonistas & inibidores , Ácidos Sulfônicos/síntese química , Ácidos Sulfônicos/farmacologia , Animais , Células COS , Chlorocebus aethiops , Desenho de Fármacos , Modelos Moleculares , Ligação Proteica , Relação Estrutura-Atividade , Especificidade por Substrato
11.
Pharmazie ; 70(12): 777-83, 2015 Dec.
Artigo em Inglês | MEDLINE | ID: mdl-26817274

RESUMO

Sixteen 2-substituted ethenesulfonic acid ester derivatives were designed, synthesized and evaluated for the inhibitory activity against tyrosine phosphatase 1B (PTP1B) and T-Cell protein tyrosine phosphatase (TCPTP). The structural activity relationship (SAR) of these compounds demonstrated that the hydrophilic head, aromatic center and the hydrophobic tail affected the inhibitory activities against PTP1B and the selectivity over TCPTP. Most of the compounds exhibited excellent inhibitory activity against PTP1B with IC50 value of 1.0 µM - 31.2 µM. SAR analysis revealed that the hydrophilic head was indispensable in the maintain of inhibitory activity against PTP1B, the aromatic center significantly altered the selectivity of PTP1B over TCPTP, and the hydrophobic tail significantly altered the inhibitory activity against PTP1B.


Assuntos
Inibidores Enzimáticos/síntese química , Inibidores Enzimáticos/farmacologia , Proteína Tirosina Fosfatase não Receptora Tipo 1/antagonistas & inibidores , Ésteres do Ácido Sulfúrico/síntese química , Ésteres do Ácido Sulfúrico/farmacologia , Desenho de Fármacos , Ensaios de Triagem em Larga Escala , Humanos , Interações Hidrofóbicas e Hidrofílicas , Modelos Moleculares , Simulação de Acoplamento Molecular , Relação Estrutura-Atividade , Linfócitos T/enzimologia
12.
Methods Mol Biol ; 2702: 327-345, 2023.
Artigo em Inglês | MEDLINE | ID: mdl-37679628

RESUMO

Antibodies that bind peptide-MHC (pMHC) complex in a manner akin to T cell receptor (TCR) have not only helped in understanding the mechanism of TCR-pMHC interactions in the context of T cell biology but also spurred considerable interest in recent years as potential cancer therapeutics. Traditional methods to generate such antibodies using hybridoma and B cell sorting technologies are sometimes inadequate, possibly due to the small contribution of peptide to the overall B cell epitope space on the surface of the pMHC complex (typical peptide MW = 1 kDa versus MHC MW = 45 kDa) and to the multiple efficiency limiting steps inherent in these methods. In this chapter we describe phage display approaches, including a cell panning strategy, for the rapid generation of such antibodies with high specificity and affinity.


Assuntos
Anticorpos , Bacteriófagos , Linfócitos B , Movimento Celular , Técnicas de Visualização da Superfície Celular , Antígenos de Histocompatibilidade
13.
Plants (Basel) ; 11(5)2022 Mar 01.
Artigo em Inglês | MEDLINE | ID: mdl-35270147

RESUMO

Maize is an important cereal crop but is sensitive to heat stress, which significantly restricts its grain yield. To explore the molecular mechanism of maize heat tolerance, a heat-tolerant hybrid ZD309 and its parental lines (H39_1 and M189) were subjected to heat stress, followed by transcriptomic and metabolomic analyses. After six-day-heat treatment, the growth of ZD309 and its parental lines were suppressed, showing dwarf stature and rolled leaf compared with the control plants. ZD309 exhibited vigorous growth; however, M189 displayed superior heat tolerance. By transcriptomic and metabolomic analysis, hundreds to thousands of differentially expressed genes (DEGs) and metabolites (DEMs) were identified. Notably, the female parent H39 shares more DEGs and DEMs with the hybrid ZD309, indicating more genetic gain derived from the female instead of the male. A total of 299 heat shock genes detected among three genotypes were greatly aggregated in sugar transmembrane transporter activity, plasma membrane, photosynthesis, protein processing in the endoplasmic reticulum, cysteine, and methionine metabolism. A total of 150 heat-responsive metabolites detected among three genotypes were highly accumulated, including jasmonic acid, amino acids, sugar, flavonoids, coumarin, and organic acids. Integrating transcriptomic and metabolomic assays revealed that plant hormone signal transduction, cysteine, and methionine metabolism, and α-linolenic acid metabolism play crucial roles in heat tolerance in maize. Our research will be facilitated to identify essential heat tolerance genes in maize, thereby contributing to breeding heat resistance maize varieties.

14.
Nat Plants ; 8(7): 750-763, 2022 07.
Artigo em Inglês | MEDLINE | ID: mdl-35851624

RESUMO

Single-cross maize hybrids display superior heterosis and are produced from crossing two parental inbred lines belonging to genetically different heterotic groups. Here we assembled 1,604 historically utilized maize inbred lines belonging to various female heterotic groups (FHGs) and male heterotic groups (MHGs), and conducted phenotyping and genomic sequencing analyses. We found that the FHGs and MHGs have undergone both convergent and divergent changes for different sets of agronomic traits. Using genome-wide selection scans and association analyses, we identified a large number of candidate genes that contributed to the improvement of agronomic traits of the FHGs and MHGs. Moreover, we observed increased genetic differentiation between the FHGs and MHGs across the breeding eras, and we found a positive correlation between increasing heterozygosity levels in the differentiated genes and heterosis in hybrids. Furthermore, we validated the function of two selected genes and a differentiated gene. This study provides insights into the genomic basis of modern hybrid maize breeding.


Assuntos
Vigor Híbrido , Zea mays , Genômica , Fenótipo , Melhoramento Vegetal , Zea mays/genética
15.
Materials (Basel) ; 14(22)2021 Nov 15.
Artigo em Inglês | MEDLINE | ID: mdl-34832301

RESUMO

The microstructure evolution and mechanical properties of medium carbon martensitic steel during the warm rolling and annealing process were studied by scanning electron microscope (SEM), electron back scattering diffraction (EBSD), and electronic universal testing machine. The results showed that the microstructure of ferrite matrix with mass dispersive cementite particles was obtained by decomposition of martensitic in medium-carbon martensitic steel after warm rolling. The grain size of ferrite was ~0.53 µm, the yield strength and tensile strength were 951 MPa and 968 MPa, respectively, and the total elongation rate was 11.5% after warm rolling at 600 °C. Additionally, after the next 4 h of annealing, the grain size of ferrite and particle size of cementite increased to ~1.35 µm and ~360 nm and the yield strength and tensile strength decreased to 600 MPa and 645 MPa, respectively, with a total elongation increases of 20.9%. The strength of the material increased with increasing strain rate in tension, and the yield-to-tensile strength ratio increased from 0.92 to 0.94 and maintained good plasticity.

16.
Ann Lab Med ; 40(6): 457-465, 2020 11.
Artigo em Inglês | MEDLINE | ID: mdl-32539301

RESUMO

BACKGROUND: Diabetes can complicate hypertension management by increasing the risk of cardiovascular disease (CVD) and all-cause mortality. Studies targeting diabetes detection in hypertensive individuals demonstrating an increased risk of diabetes are lacking. We aimed to assess the performance of hemoglobin A1c (HbA1c) and its cut-off point in detecting diabetes in the abovementioned population. METHODS: Data from 4,096 community-dwellers with hypertension but without known diabetes were obtained from the Study on Evaluation of iNnovated Screening tools and determInation of optimal diagnostic cut-off points for type 2 diaBetes in Chinese muLti-Ethnic (SENSIBLE) study; these data were randomly split into exploration (70% of the sample) and internal validation (the remaining 30%) datasets. The optimal HbA1c cut-off point was derived from the exploration dataset and externally validated using another dataset from 2,431 hypertensive individuals. The oral glucose tolerance test was considered the gold-standard for confirming diabetes. RESULTS: The areas under the ROC curves for HbA1c to detect diabetes were 0.842, 0.832, and 0.829 for the exploration, internal validation, and external validation datasets, respectively. An optimal HbA1c cut-off point of 5.8% (40 mmol/mol) yielded a sensitivity of 76.2% and a specificity of 74.5%. Individuals who were not diagnosed as having diabetes by HbA1c at 5.8% (40 mmol/mol) had a lower 10-year CVD risk score than those diagnosed as having diabetes (P=0.01). HbA1c≤5.1% (32 mmol/mol) and ≥6.4% (46 mmol/mol) could indicate the absence and presence of diabetes, respectively. CONCLUSIONS: HbA1c could detect diabetes effectively in community-dwellers with hypertension.


Assuntos
Diabetes Mellitus Tipo 2/diagnóstico , Hemoglobinas Glicadas/análise , Hipertensão/patologia , Fatores Etários , Área Sob a Curva , Doenças Cardiovasculares/etiologia , Diabetes Mellitus Tipo 2/complicações , Exercício Físico , Feminino , Humanos , Hipertensão/complicações , Masculino , Pessoa de Meia-Idade , Curva ROC , Fatores de Risco , Sensibilidade e Especificidade
17.
Yao Xue Xue Bao ; 44(7): 695-702, 2009 Jul.
Artigo em Zh | MEDLINE | ID: mdl-19806905

RESUMO

Tumor hypoxia is the necessary process in the development of solid tumors, which is the key factor for drug resistance, recurrence, attack and shift of tumor. Hypoxic tumor cells have a certain extent of tolerance to radiation and chemotherapy. Tumor hypoxia is an important target for medication therapy. In the recent years, the bioreductive drugs targeted tumor hypoxia has made great process in the treatment of tumors. The latest advances of bioreductive drugs targeted hypoxia were reviewed in this paper.


Assuntos
Antineoplásicos , Hipóxia , Neoplasias/tratamento farmacológico , Substâncias Redutoras , Antineoplásicos/uso terapêutico , Hipóxia Celular , Humanos , Quinonas/uso terapêutico , Substâncias Redutoras/uso terapêutico
18.
EBioMedicine ; 35: 307-316, 2018 Sep.
Artigo em Inglês | MEDLINE | ID: mdl-30115607

RESUMO

BACKGROUND: The terrifying undiagnosed rate and high prevalence of diabetes have become a public emergency. A high efficiency and cost-effective early recognition method is urgently needed. We aimed to generate innovative, user-friendly nomograms that can be applied for diabetes screening in different ethnic groups in China using the non-lab or noninvasive semi-lab data. METHODS: This multicenter, multi-ethnic, population-based, cross-sectional study was conducted in eight sites in China by enrolling subjects aged 20-70. Sociodemographic and anthropometric characteristics were collected. Blood and urine samples were obtained 2 h following a standard 75 g glucose solution. In the final analysis, 10,794 participants were included and randomized into model development (n = 8096) and model validation (n = 2698) group with a ratio of 3:1. Nomograms were developed by the stepwise binary logistic regression. The nomograms were validated internally by a bootstrap sampling method in the model development set and externally in the model validation set. The area under the receiver operating characteristic curve (AUC) was used to assess the screening performance of the nomograms. Decision curve analysis was applied to calculate the net benefit of the screening model. RESULTS: The overall prevalence of undiagnosed diabetes was 9.8% (1059/10794) according to ADA criteria. The non-lab model revealed that gender, age, body mass index, waist circumference, hypertension, ethnicities, vegetable daily consumption and family history of diabetes were independent risk factors for diabetes. By adding 2 h post meal glycosuria qualitative to the non-lab model, the semi-lab model showed an improved Akaike information criterion (AIC: 4506 to 3580). The AUC of the semi-lab model was statistically larger than the non-lab model (0.868 vs 0.763, P < 0.001). The optimal cutoff probability in semi-lab and non-lab nomograms were 0.088 and 0.098, respectively. The sensitivity and specificity were 76.3% and 81.6%, respectively in semi-lab nomogram, and 72.1% and 67.3% in non-lab nomogram at the optimal cut off point. The decision curve analysis also revealed a bigger decrease of avoidable OGTT test (52 per 100 subjects) in the semi-lab model compared to the non-lab model (36 per 100 subjects) and the existed New Chinese Diabetes Risk Score (NCDRS, 35 per 100 subjects). CONCLUSION: The non-lab and semi-lab nomograms appear to be reliable tools for diabetes screening, especially in developing countries. However, the semi-lab model outperformed the non-lab model and NCDRS prediction systems and might be worth being adopted as decision support in diabetes screening in China.


Assuntos
Algoritmos , Diabetes Mellitus/diagnóstico , Programas de Rastreamento , Estudos Transversais , Tomada de Decisões , Feminino , Humanos , Modelos Logísticos , Masculino , Pessoa de Meia-Idade , Nomogramas , Razão de Chances , Reprodutibilidade dos Testes , Fatores de Risco
19.
ACS Chem Biol ; 12(5): 1204-1210, 2017 05 19.
Artigo em Inglês | MEDLINE | ID: mdl-28368100

RESUMO

Numerous cytochrome P450 (CYP) 2B6 substrates including drugs and environmental chemicals are halogenated. To assess the role of halogen-π bonds in substrate selectivity and orientation in the active site, structures of four CYP2B6 monoterpenoid complexes were solved by X-ray crystallography. Bornyl bromide exhibited dual orientations in the active site with the predominant orientation revealing a bromine-π bond with the Phe108 side chain. Bornane demonstrated two orientations with equal occupancy; in both, the C2 atom that bears the bromine in bornyl bromide was displaced by more than 2.5 Å compared with the latter complex. The bromine in myrtenyl bromide π-bonded with Phe297 in CYP2B6, whereas the two major orientations in the active site mutant I114V exhibited bromine-π interactions with two additional residues, Phe108 and Phe115. Analysis of existing structures suggests that halogen-π interactions may be unique to the CYP2B enzymes within CYP family 2 but are also important for CYP3A enzymes.


Assuntos
Domínio Catalítico , Citocromo P-450 CYP2B6/química , Halogênios/química , Sítios de Ligação , Cristalografia por Raios X , Humanos , Monoterpenos/química , Ligação Proteica , Especificidade por Substrato
20.
Eur J Med Chem ; 126: 7-14, 2017 Jan 27.
Artigo em Inglês | MEDLINE | ID: mdl-27744188

RESUMO

The synthesis of (S)-2-(4-tert-butylphenoxy)-3-(benzoxazol-5-yl) propanoic acid derivatives (2a-k) were described and their in vitro antibacterial activities were determined against Gram-negative and -positive bacteria. These compounds were found to exert a broad spectrum of activity against the screened bacteria, but poor MIC values were found for Candida albicans fungi. Compound 2b bearing a hydrophobic aromatic tie was the most active derivative against all bacteria studied with MIC values ranging from 0.098 to 0.78 µg/mL. The activity of 2b against B. subtilis was 2-fold higher than Penicillin, and 8- to 510-fold higher than other control antibiotics.


Assuntos
Anti-Infecciosos/síntese química , Anti-Infecciosos/farmacologia , Benzoxazóis/síntese química , Benzoxazóis/farmacologia , Desenho de Fármacos , Anti-Infecciosos/química , Bacillus subtilis/efeitos dos fármacos , Benzoxazóis/química , Candida albicans/efeitos dos fármacos , Técnicas de Química Sintética , Testes de Sensibilidade Microbiana
SELEÇÃO DE REFERÊNCIAS
DETALHE DA PESQUISA