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1.
Nucleic Acids Res ; 52(14): 8466-8482, 2024 Aug 12.
Artigo em Inglês | MEDLINE | ID: mdl-38769059

RESUMO

Plant ARGONAUTE (AGO) proteins play pivotal roles regulating gene expression through small RNA (sRNA) -guided mechanisms. Among the 10 AGO proteins in Arabidopsis thaliana, AGO1 stands out as the main effector of post-transcriptional gene silencing. Intriguingly, a specific region of AGO1, its N-terminal extension (NTE), has garnered attention in recent studies due to its involvement in diverse regulatory functions, including subcellular localization, sRNA loading and interactions with regulatory factors. In the field of post-translational modifications (PTMs), little is known about arginine methylation in Arabidopsis AGOs. In this study, we show that NTE of AGO1 (NTEAGO1) undergoes symmetric arginine dimethylation at specific residues. Moreover, NTEAGO1 interacts with the methyltransferase PRMT5, which catalyzes its methylation. Notably, we observed that the lack of symmetric dimethylarginine has no discernible impact on AGO1's subcellular localization or miRNA loading capabilities. However, the absence of PRMT5 significantly alters the loading of a subgroup of sRNAs into AGO1 and reshapes the NTEAGO1 interactome. Importantly, our research shows that symmetric arginine dimethylation of NTEs is a common process among Arabidopsis AGOs, with AGO1, AGO2, AGO3 and AGO5 undergoing this PTM. Overall, this work deepens our understanding of PTMs in the intricate landscape of RNA-associated gene regulation.


Assuntos
Proteínas de Arabidopsis , Arabidopsis , Arginina , Proteínas Argonautas , Processamento de Proteína Pós-Traducional , Proteína-Arginina N-Metiltransferases , Proteínas Argonautas/metabolismo , Proteínas Argonautas/genética , Proteínas de Arabidopsis/metabolismo , Proteínas de Arabidopsis/genética , Proteína-Arginina N-Metiltransferases/metabolismo , Proteína-Arginina N-Metiltransferases/genética , Arabidopsis/genética , Arabidopsis/metabolismo , Metilação , Arginina/metabolismo , Regulação da Expressão Gênica de Plantas , MicroRNAs/metabolismo , MicroRNAs/genética , Ligação Proteica
2.
J Virol ; 97(10): e0112423, 2023 10 31.
Artigo em Inglês | MEDLINE | ID: mdl-37792002

RESUMO

IMPORTANCE: Many plant proteins and some proteins from plant pathogens are dually targeted to chloroplasts and mitochondria, and are supposed to be transported along the general pathways for organellar protein import, but this issue has not been explored yet. Moreover, organellar translocon receptors exist as families of several members whose functional specialization in different cargos is supposed but not thoroughly studied. This article provides novel insights into such topics showing for the first time that an exogenous protein, the melon necrotic spot virus coat protein, exploits the common Toc/Tom import systems to enter both mitochondria and chloroplasts while identifying the involved specific receptors.


Assuntos
Arabidopsis , Proteínas do Capsídeo , Cloroplastos , Mitocôndrias , Nicotiana , Proteínas de Plantas , Receptores de Superfície Celular , Arabidopsis/metabolismo , Arabidopsis/virologia , Proteínas do Capsídeo/metabolismo , Proteínas de Transporte/metabolismo , Cloroplastos/metabolismo , Cloroplastos/virologia , Mitocôndrias/metabolismo , Mitocôndrias/virologia , Nicotiana/metabolismo , Nicotiana/virologia , Proteínas de Plantas/metabolismo , Transporte Proteico , Receptores de Superfície Celular/metabolismo
3.
J Exp Bot ; 74(7): 2374-2388, 2023 04 09.
Artigo em Inglês | MEDLINE | ID: mdl-36722331

RESUMO

ARGONAUTE (AGO) proteins are the final effectors of small RNA-mediated transcriptional and post-transcriptional silencing pathways. Plant AGO proteins are essential for preserving genome integrity, regulating developmental processes, and in stress responses and pathogen defense. Since the discovery of the first eukaryotic AGO in Arabidopsis, our understanding of these proteins has grown exponentially throughout all the eukaryotes. However, many aspects of AGO proteins' modes of action and how they are influenced by their subcellular localization are still to be elucidated. Here, we provide an updated and comprehensive view of the evolution, domain architecture and roles, expression pattern, subcellular localization, and biological functions of the 10 AGO proteins in Arabidopsis.


Assuntos
Arabidopsis , MicroRNAs , Arabidopsis/genética , Arabidopsis/metabolismo , Proteínas Argonautas/genética , Proteínas Argonautas/metabolismo , Proteínas de Plantas/metabolismo , Plantas/metabolismo , MicroRNAs/metabolismo , Interferência de RNA
4.
Front Plant Sci ; 13: 1040688, 2022.
Artigo em Inglês | MEDLINE | ID: mdl-36388587

RESUMO

Improved bioinformatics tools for annotating gene function are becoming increasingly available, but such information must be considered theoretical until further experimental evidence proves it. In the work reported here, the genes for the main components of the translocons of the outer membrane of chloroplasts (Toc) and mitochondria (Tom), including preprotein receptors and protein-conducting channels of N. benthamiana, were identified. Sequence identity searches and phylogenetic relationships with functionally annotated sequences such as those of A. thaliana revealed that N. benthamiana orthologs mainly exist as recently duplicated loci. Only a Toc34 ortholog was found (NbToc34), while Toc159 receptor family was composed of four orthologs but somewhat different from those of A. thaliana. Except for NbToc90, the rest (NbToc120, NbToc159A and NbToc159B) had a molecular weight of about 150 kDa and an acidic domain similar in length. Only two orthologs of the Tom20 receptors, NbTom20-1 and NbTom20-2, were found. The number of the Toc and Tom receptor isoforms in N. benthamiana was comparable to that previously reported in tomato and what we found in BLAST searches in other species in the genera Nicotiana and Solanum. After cloning, the subcellular localization of N. benthamiana orthologs was studied, resulting to be identical to that of A. thaliana receptors. Phenotype analysis after silencing together with relative expression analysis in roots, stems and leaves revealed that, except for the Toc and Tom channel-forming components (NbToc75 and NbTom40) and NbToc34, functional redundancy could be observed either among Toc159 or mitochondrial receptors. Finally, heterodimer formation between NbToc34 and the NbToc159 family receptors was confirmed by two alternative techniques indicating that different Toc complexes could be assembled. Additional work needs to be addressed to know if this results in a functional specialization of each Toc complex.

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