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1.
Future Oncol ; 17(29): 3797-3807, 2021 Oct.
Artigo em Inglês | MEDLINE | ID: mdl-34189965

RESUMO

Aim: An augmented intelligence tool to predict short-term mortality risk among patients with cancer could help identify those in need of actionable interventions or palliative care services. Patients & methods: An algorithm to predict 30-day mortality risk was developed using socioeconomic and clinical data from patients in a large community hematology/oncology practice. Patients were scored weekly; algorithm performance was assessed using dates of death in patients' electronic health records. Results: For patients scored as highest risk for 30-day mortality, the event rate was 4.9% (vs 0.7% in patients scored as low risk; a 7.4-times greater risk). Conclusion: The development and validation of a decision tool to accurately identify patients with cancer who are at risk for short-term mortality is feasible.


Assuntos
Inteligência Artificial , Neoplasias/mortalidade , Adolescente , Adulto , Idoso , Idoso de 80 Anos ou mais , Algoritmos , Sistemas de Apoio a Decisões Clínicas , Registros Eletrônicos de Saúde , Feminino , Humanos , Aprendizado de Máquina , Masculino , Pessoa de Meia-Idade , Neoplasias/terapia , Reprodutibilidade dos Testes , Medição de Risco , Fatores Socioeconômicos , Adulto Jovem
2.
Microbiology (Reading) ; 164(4): 540-550, 2018 04.
Artigo em Inglês | MEDLINE | ID: mdl-29488864

RESUMO

Shigella species cause diarrhoea by invading and spreading through the epithelial layer of the human colon. The infection triggers innate immune responses in the host that the bacterium combats by translocating into the host cell cytosol via a type 3 secretion system bacterial effector proteins that interfere with host processes. We previously demonstrated that interaction of the Shigella type 3 secreted effector protein IcsB with the host protein Toca-1 inhibits the innate immune response microtubule-associated protein light-chain 3 (LC3)-associated phagocytosis, and that IcsB interaction with Toca-1 is required for inhibition of this host response. Here, we show that Toca-1 in vitro precipitated not only IcsB, but also the type 3 secreted proteins OspC3, IpgD and IpaB. OspC3 and IpgD precipitation with Toca-1 was dependent on IcsB. Early during infection, most of these proteins localized near intracellular Shigella. We examined whether interactions among these proteins restrict innate host cell responses other than LC3-associated phagocytosis. In infected cells, OspC3 blocks production and secretion of the mature pro-inflammatory cytokine IL-18; however, we found that interaction of OspC3 with IcsB, either directly or indirectly via Toca-1, was not required for OspC3-mediated restriction of IL-18 production. These results indicate that interactions of the host protein Toca-1 with a subset of type 3 effector proteins contribute to the established function of some, but not all involved, effector proteins.


Assuntos
Proteínas de Bactérias/metabolismo , Proteínas de Transporte/metabolismo , Disenteria Bacilar/microbiologia , Shigella flexneri/fisiologia , Sistemas de Secreção Tipo III/metabolismo , Proteínas de Bactérias/genética , Proteínas de Transporte/genética , Linhagem Celular , Citoplasma/metabolismo , Disenteria Bacilar/metabolismo , Células Epiteliais/metabolismo , Células Epiteliais/microbiologia , Deleção de Genes , Técnicas de Silenciamento de Genes , Interações Hospedeiro-Patógeno , Humanos , Interleucina-18/análise , Interleucina-18/metabolismo , Macrófagos/metabolismo , Macrófagos/microbiologia , Ligação Proteica , Shigella flexneri/genética , Shigella flexneri/metabolismo , Sistemas de Secreção Tipo III/genética
3.
Annu Rev Microbiol ; 66: 349-70, 2012.
Artigo em Inglês | MEDLINE | ID: mdl-22994496

RESUMO

Spirochete motility is enigmatic: It differs from the motility of most other bacteria in that the entire bacterium is involved in translocation in the absence of external appendages. Using the Lyme disease spirochete Borrelia burgdorferi (Bb) as a model system, we explore the current research on spirochete motility and chemotaxis. Bb has periplasmic flagella (PFs) subterminally attached to each end of the protoplasmic cell cylinder, and surrounding the cell is an outer membrane. These internal helix-shaped PFs allow the spirochete to swim by generating backward-moving waves by rotation. Exciting advances using cryoelectron tomography are presented with respect to in situ analysis of cell, PF, and motor structure. In addition, advances in the dynamics of motility, chemotaxis, gene regulation, and the role of motility and chemotaxis in the life cycle of Bb are summarized. The results indicate that the motility paradigms of flagellated bacteria do not apply to these unique bacteria.


Assuntos
Borrelia burgdorferi/fisiologia , Quimiotaxia , Locomoção , Flagelos/fisiologia
4.
Cell Microbiol ; 18(12): 1857-1870, 2016 Dec.
Artigo em Inglês | MEDLINE | ID: mdl-27302486

RESUMO

AM-19226 is a pathogenic, non-O1/non-O139 serogroup strain of Vibrio cholerae that uses a Type 3 Secretion System (T3SS) mediated mechanism to colonize host tissues and disrupt homeostasis, causing cholera. Co-culturing the Caco2-BBE human intestinal epithelial cell line with AM-19226 in the presence of bile results in rapid mammalian cell death that requires a functional T3SS. We examined the role of bile, sought to identify the mechanism, and evaluated the contributions of T3SS translocated effectors in in vitro cell death. Our results suggest that Caco2-BBE cytotoxicity does not proceed by apoptotic or necrotic mechanisms, but rather displays characteristics consistent with osmotic lysis. Cell death was preceded by disassembly of epithelial junctions and reorganization of the cortical membrane skeleton, although neither cell death nor cell-cell disruption required VopM or VopF, two effectors known to alter actin dynamics. Using deletion strains, we identified a subset of AM-19226 Vops that are required for host cell death, which were previously assigned roles in protein translocation and colonization, suggesting that they function other than to promote cytotoxicity. The collective results therefore suggest that cooperative Vop activities are required to achieve cytotoxicity in vitro, or alternatively, that translocon pores destabilize the membrane in a bile dependent manner.


Assuntos
Proteínas de Bactérias/genética , Ácidos e Sais Biliares/toxicidade , Regulação Bacteriana da Expressão Gênica , Interações Hospedeiro-Patógeno , Sistemas de Secreção Tipo III/genética , Vibrio cholerae/genética , Proteínas de Bactérias/metabolismo , Bile/química , Células CACO-2 , Morte Celular/efeitos dos fármacos , Deleção de Genes , Humanos , Pressão Osmótica , Transdução de Sinais , Sistemas de Secreção Tipo III/metabolismo , Vibrio cholerae/crescimento & desenvolvimento , Vibrio cholerae/patogenicidade , Virulência
5.
J Bacteriol ; 198(11): 1675-1682, 2016 06 01.
Artigo em Inglês | MEDLINE | ID: mdl-27021561

RESUMO

UNLABELLED: Genes carried on the type 3 secretion system (T3SS) pathogenicity island of Vibrio cholerae non-O1/non-O139 serogroup strain AM-19226 must be precisely regulated in order for bacteria to cause disease. Previously reported results showed that both T3SS function and the presence of bile are required to cause Caco2-BBE cell cytotoxicity during coculture with strain AM-19226. We therefore investigated additional parameters affecting in vitro cell death, including bacterial load and the role of three transmembrane transcriptional regulatory proteins, VttRA, VttRB, and ToxR. VttRA and VttRB are encoded on the horizontally acquired T3SS genomic island, whereas ToxR is encoded on the ancestral chromosome. While strains carrying deletions in any one of the three transcriptional regulatory genes are unable to cause eukaryotic cell death, the results of complementation studies point to a hierarchy of regulatory control that converges on vttRB expression. The data suggest both that ToxR and VttRA act upstream of VttRB and that modifying the level of either vttRA or vttRB expression can strongly influence T3SS gene expression. We therefore propose a model whereby T3SS activity and, hence, in vitro cytotoxicity are ultimately regulated by vttRB expression. IMPORTANCE: In contrast to O1 and O139 serogroup V. cholerae strains that cause cholera using two main virulence factors (toxin-coregulated pilus [TCP] and cholera toxin [CT]), O39 serogroup strain AM-19226 uses a type 3 secretion system as its principal virulence mechanism. Although the regulatory network governing TCP and CT expression is well understood, the factors influencing T3SS-associated virulence are not. Using an in vitro mammalian cell model to investigate the role of three ToxR-like transmembrane transcriptional activators in causing T3SS-dependent cytotoxicity, we found that expression levels and a hierarchical organization were important for promoting T3SS gene expression. Furthermore, our results suggest that horizontally acquired, ToxR-like proteins act in concert with the ancestral ToxR protein to orchestrate T3SS-mediated pathogenicity.


Assuntos
Proteínas de Bactérias/metabolismo , Cólera/microbiologia , Proteínas de Ligação a DNA/metabolismo , Regulação Bacteriana da Expressão Gênica , Fatores de Transcrição/metabolismo , Sistemas de Secreção Tipo III/metabolismo , Vibrio cholerae/metabolismo , Proteínas de Bactérias/genética , Células CACO-2 , Proteínas de Ligação a DNA/genética , Humanos , Fatores de Transcrição/genética , Sistemas de Secreção Tipo III/genética , Vibrio cholerae/genética
6.
Proc Natl Acad Sci U S A ; 110(35): 14390-5, 2013 Aug 27.
Artigo em Inglês | MEDLINE | ID: mdl-23940315

RESUMO

Periplasmic flagella are essential for the distinctive morphology, motility, and infectious life cycle of the Lyme disease spirochete Borrelia burgdorferi. In this study, we genetically trapped intermediates in flagellar assembly and determined the 3D structures of the intermediates to 4-nm resolution by cryoelectron tomography. We provide structural evidence that secretion of rod substrates triggers remodeling of the central channel in the flagellar secretion apparatus from a closed to an open conformation. This open channel then serves as both a gateway and a template for flagellar rod assembly. The individual proteins assemble sequentially to form a modular rod. The hook cap initiates hook assembly on completion of the rod, and the filament cap facilitates filament assembly after formation of the mature hook. Cryoelectron tomography and mutational analysis thus combine synergistically to provide a unique structural blueprint of the assembly process of this intricate molecular machine in intact cells.


Assuntos
Borrelia burgdorferi/metabolismo , Flagelos/metabolismo , Tomografia/métodos , Proteínas de Bactérias/química , Proteínas de Bactérias/genética , Proteínas de Bactérias/metabolismo , Borrelia burgdorferi/genética , Mutação , Conformação Proteica
7.
Infect Immun ; 83(7): 2862-2869, 2015 07.
Artigo em Inglês | MEDLINE | ID: mdl-25939511

RESUMO

Vibrio cholerae is a genetically diverse species, and pathogenic strains can encode different virulence factors that mediate colonization and secretory diarrhea. Although the toxin co-regulated pilus (TCP) is the primary colonization factor in epidemic causing V. cholerae strains, other strains do not encode TCP and instead promote colonization via the activity of a type three secretion system (T3SS). Using the infant mouse model and T3SS-positive O39 serogroup strain AM-19226, we sought to determine which of 12 previously identified, T3SS translocated proteins (Vops) are important for host colonization. We constructed in frame deletions in each of the 12 loci in strain AM-19226, and identified five Vop deletion strains, including ΔVopM, which were severely attenuated for colonization. Interestingly, a subset of deletion strains was also incompetent for effector protein transport. Our collective data therefore suggest that several translocated proteins may also function as components of the structural apparatus or translocation machinery, and indicate that while VopM is critical for establishing an infection, the combined activities of other effectors may also contribute to the ability of T3SS-positive strains to colonize host epithelial cell surfaces.

8.
JCO Oncol Pract ; 19(5): e725-e731, 2023 05.
Artigo em Inglês | MEDLINE | ID: mdl-36913643

RESUMO

PURPOSE: Cancer-related emergency department (ED) visits and hospitalizations that would have been appropriately managed in the outpatient setting are avoidable and detrimental to patients and health systems. This quality improvement (QI) project aimed to leverage patient risk-based prescriptive analytics at a community oncology practice to reduce avoidable acute care use (ACU). METHODS: Using the Plan-Do-Study-Act (PDSA) methodology, we implemented the Jvion Care Optimization and Recommendation Enhancement augmented intelligence (AI) tool at an Oncology Care Model (OCM) practice, the Center for Cancer and Blood Disorders practice. We applied continuous machine learning to predict risk of preventable harm (avoidable ACU) and generated patient-specific recommendations that nurses implemented to avert it. RESULTS: Patient-centric interventions included medication/dosage changes, laboratory tests/imaging, physical/occupational/psychologic therapy referral, palliative care/hospice referral, and surveillance/observation. Nurses contacted patients every 1-2 weeks after initial outreach to assess and maintain adherence to recommended interventions. Per 100 unique OCM patients, monthly ED visits dropped from 13.7 to 11.5 (18%), a sustained month-over-month improvement. Quarterly admissions dropped from 19.5 to 17.1 (13%), a sustained quarter-over-quarter improvement. Overall, the practice realized potential annual savings of $2.8 million US dollars (USD) on avoidable ACU. CONCLUSION: The AI tool has enabled nurse case managers to identify and resolve critical clinical issues and reduce avoidable ACU. Effects on outcomes can be inferred from the reduction; targeting short-term interventions toward patients most at-risk translates to better long-term care and outcomes. QI projects involving predictive modeling of patient risk, prescriptive analytics, and nurse outreach may reduce ACU.


Assuntos
Neoplasias , Melhoria de Qualidade , Humanos , Hospitalização , Oncologia , Neoplasias/complicações , Neoplasias/terapia , Serviço Hospitalar de Emergência
9.
Sci Immunol ; 8(85): eabo4767, 2023 07 21.
Artigo em Inglês | MEDLINE | ID: mdl-37478192

RESUMO

Endotoxin-bacterial lipopolysaccharide (LPS)-is a driver of lethal infection sepsis through excessive activation of innate immune responses. When delivered to the cytosol of macrophages, cytosolic LPS (cLPS) induces the assembly of an inflammasome that contains caspases-4/5 in humans or caspase-11 in mice. Whereas activation of all other inflammasomes is triggered by sensing of pathogen products by a specific host cytosolic pattern recognition receptor protein, whether pattern recognition receptors for cLPS exist has remained unclear, because caspase-4, caspase-5, and caspase-11 bind and activate LPS directly in vitro. Here, we show that the primate-specific protein NLRP11 is a pattern recognition receptor for cLPS that is required for efficient activation of the caspase-4 inflammasome in human macrophages. In human macrophages, NLRP11 is required for efficient activation of caspase-4 during infection with intracellular Gram-negative bacteria or upon electroporation of LPS. NLRP11 could bind LPS and separately caspase-4, forming a high-molecular weight complex with caspase-4 in HEK293T cells. NLRP11 is present in humans and other primates but absent in mice, likely explaining why it has been overlooked in screens looking for innate immune signaling molecules, most of which have been carried out in mice. Our results demonstrate that NLRP11 is a component of the caspase-4 inflammasome activation pathway in human macrophages.


Assuntos
Inflamassomos , Lipopolissacarídeos , Humanos , Animais , Camundongos , Citosol/microbiologia , Células HEK293 , Macrófagos , Caspases , Receptores de Reconhecimento de Padrão/metabolismo
10.
Dev Biol ; 349(2): 342-9, 2011 Jan 15.
Artigo em Inglês | MEDLINE | ID: mdl-21050843

RESUMO

The mammalian embryo represents a fundamental paradox in biology. Its location within the uterus, especially early during development when embryonic cardiovascular development and placental blood flow are not well-established, leads to an obligate hypoxic environment. Despite this hypoxia, the embryonic cells are able to undergo remarkable growth, morphogenesis, and differentiation. Recent evidence suggests that embryonic organ differentiation, including pancreatic ß-cells, is tightly regulated by oxygen levels. Since a major determinant of oxygen tension in mammalian embryos after implantation is embryonic blood flow, here we used a novel survivable in utero intracardiac injection technique to deliver a vascular tracer to living mouse embryos. Once injected, the embryonic heart could be visualized to continue contracting normally, thereby distributing the tracer specifically only to those regions where embryonic blood was flowing. We found that the embryonic pancreas early in development shows a remarkable paucity of blood flow and that the presence of blood flow correlates with the differentiation state of the developing pancreatic epithelial cells in the region of the blood flow.


Assuntos
Diferenciação Celular/fisiologia , Embrião de Mamíferos/irrigação sanguínea , Oxigênio/metabolismo , Pâncreas/embriologia , Ultrassonografia de Intervenção/métodos , Animais , Técnicas de Imagem Cardíaca/métodos , Fluoresceínas/administração & dosagem , Imuno-Histoquímica , Camundongos , Microscopia de Fluorescência , Pâncreas/irrigação sanguínea , Pâncreas/citologia , Pâncreas/metabolismo , Lectinas de Plantas/administração & dosagem
11.
Infect Immun ; 80(12): 4444-55, 2012 Dec.
Artigo em Inglês | MEDLINE | ID: mdl-23045478

RESUMO

Numerous virulence factors have been associated with pathogenic non-O1/non-O139 serogroup strains of Vibrio cholerae. Among them are the thermostable direct hemolysin (TDH) and the TDH-related hemolysin (TRH), which share amino acid similarities to the TDH and TRH proteins of Vibrio parahaemolyticus, where they have been shown to contribute to pathogenesis. Although TDH and TRH homologs can be encoded on extrachromosomal elements in V. cholerae, type III secretion system (T3SS)-positive strains, such as AM-19226, carry a copy of trh within the T3SS genomic island. Transcriptional fusion analysis showed that in strain AM-19226, trh expression is regulated in a bile-dependent manner by a family of transmembrane transcriptional regulators that includes VttR(A), VttR(B), and ToxR. Genes encoding T3SS structural components are expressed under similar conditions, suggesting that within the T3SS genomic island, genes encoding proteins unrelated to the T3SS and loci involved in T3SS synthesis are coregulated. Despite similar in vitro expression patterns, however, TRH is not required for AM-19226 to colonize the infant mouse intestine, nor does it contribute to bile-mediated cytotoxicity when strain AM-19226 is cocultured with the mammalian cell line Caco2-BBE. Instead, we found that a functional T3SS is essential for AM-19226 to induce bile-mediated cytotoxicity in vitro. Collectively, the results are consistent with a more minor role for the V. cholerae TRH in T3SS-positive strains compared to the functions attributed to the V. parahaemolyticus TDH and TRH proteins.


Assuntos
Proteínas de Bactérias/metabolismo , Sistemas de Secreção Bacterianos/fisiologia , Regulação Bacteriana da Expressão Gênica , Proteínas Hemolisinas/metabolismo , Vibrio cholerae/patogenicidade , Sequência de Aminoácidos , Animais , Animais Recém-Nascidos , Proteínas de Bactérias/química , Proteínas de Bactérias/genética , Proteínas de Bactérias/toxicidade , Sistemas de Secreção Bacterianos/genética , Células CACO-2 , Cólera/microbiologia , Cólera/patologia , Proteínas Hemolisinas/química , Proteínas Hemolisinas/genética , Proteínas Hemolisinas/toxicidade , Humanos , Camundongos , Dados de Sequência Molecular , Vibrio cholerae/genética , Vibrio cholerae/metabolismo , Fatores de Virulência/química , Fatores de Virulência/genética , Fatores de Virulência/metabolismo , Fatores de Virulência/toxicidade
12.
JCO Oncol Pract ; 18(1): e80-e88, 2022 01.
Artigo em Inglês | MEDLINE | ID: mdl-34506215

RESUMO

PURPOSE: For patients with advanced cancer, timely referral to palliative care (PC) services can ensure that end-of-life care aligns with their preferences and goals. Overestimation of life expectancy may result in underutilization of PC services, counterproductive treatment measures, and reduced quality of life for patients. We assessed the impact of a commercially available augmented intelligence (AI) tool to predict 30-day mortality risk on PC service utilization in a real-world setting. METHODS: Patients within a large hematology-oncology practice were scored weekly between June 2018 and October 2019 with an AI tool to generate insights into short-term mortality risk. Patients identified by the tool as being at high or medium risk were assessed for a supportive care visit and further referred as appropriate. Average monthly rates of PC and hospice referrals were calculated 5 months predeployment and 17 months postdeployment of the tool in the practice. RESULTS: The mean rate of PC consults increased from 17.3 to 29.1 per 1,000 patients per month (PPM) pre- and postdeployment, whereas the mean rate of hospice referrals increased from 0.2 to 1.6 per 1,000 PPM. Eliminating the first 6 months following deployment to account for user learning curve, the mean rate of PC consults nearly doubled over baseline to 33.0 and hospice referrals increased 12-fold to 2.4 PPM. CONCLUSION: Deployment of an AI tool at a hematology-oncology practice was found to be feasible for identifying patients at high or medium risk for short-term mortality. Insights generated by the tool drove clinical practice changes, resulting in significant increases in PC and hospice referrals.


Assuntos
Cuidados Paliativos na Terminalidade da Vida , Hospitais para Doentes Terminais , Humanos , Inteligência , Cuidados Paliativos , Qualidade de Vida
13.
Infect Immun ; 79(4): 1728-40, 2011 Apr.
Artigo em Inglês | MEDLINE | ID: mdl-21282418

RESUMO

AM-19226 is a pathogenic O39 serogroup Vibrio cholerae strain that lacks the typical virulence factors for colonization (toxin-coregulated pilus [TCP]) and toxin production (cholera toxin [CT]) and instead encodes a type III secretion system (T3SS). The mechanism of pathogenesis is unknown, and few effector proteins have been identified. We therefore undertook a survey of the open reading frames (ORFs) within the ∼49.7-kb T3SS genomic island to identify potential effector proteins. We identified 15 ORFs for their ability to inhibit growth when expressed in yeast and then used a ß-lactamase (TEM1) fusion reporter system to demonstrate that 11 proteins were bona fide effectors translocated into HeLa cells in vitro in a T3SS-dependent manner. One effector, which we named VopX (A33_1663), is conserved only in V. cholerae and Vibrio parahaemolyticus T3SS-positive strains and has not been previously studied. A vopX deletion reduces the ability of strain AM-19226 to colonize in vivo, and the bile-induced expression of a vopX-lacZ transcriptional fusion in vitro is regulated by the T3SS-encoded transcriptional regulators VttR(A) and VttR(B). An RLM1 yeast deletion strain rescued the growth inhibition induced by VopX expression, suggesting that VopX interacts with components of the cell wall integrity mitogen-activated protein kinase (MAPK) pathway. The collective results show that the V. cholerae T3SS encodes multiple effector proteins, one of which likely has novel activities that contribute to disease via interference with eukaryotic signaling pathways.


Assuntos
Proteínas de Bactérias/genética , Sistemas de Secreção Bacterianos/genética , Vibrio cholerae/genética , Vibrio cholerae/patogenicidade , Fatores de Virulência/genética , Animais , Sequência de Bases , Western Blotting , Transferência Ressonante de Energia de Fluorescência , Células HeLa , Humanos , Camundongos , Microscopia Confocal , Dados de Sequência Molecular , Reação em Cadeia da Polimerase Via Transcriptase Reversa
14.
Eukaryot Cell ; 9(11): 1669-79, 2010 Nov.
Artigo em Inglês | MEDLINE | ID: mdl-20833895

RESUMO

Eukaryotic cells employ a variety of mechanisms to maintain protein quality control and homeostasis. Here we provide evidence that one such mechanism in Saccharomyces cerevisiae involves the regulated release of excess or misfolded proteins to the extracellular space. The overexpression of an epitope-tagged allele of the glycosylphosphatidylinositol (GPI)-linked cell wall protein Utr2/Crh2p (Utr2/Crh2-green fluorescent protein [GFP] or -hemagglutinin [HA]) causes endoplasmic reticulum (ER) stress and the secretion of Crh2-GFP/HA into the extracellular space. Secretion is dependent on two GPI-linked aspartyl proteases (Yps1p/2p) and components of the unfolded protein response (Ire1p and Hac1p) but is independent of ER-associated degradation (ERAD) components such as Hrd1p and Doa10p. Supporting the idea that this process represents a mechanism for protein quality control, the level of Crh2-HA is increased in strains lacking Bst1p, a protein required for the proteasomal degradation of GPI-linked proteins. Furthermore, secretion is dependent on Sec18p, indicating that it requires ER-to-Golgi trafficking, and accordingly, Crh2-HA accumulates in the ER in ire1Δ and bst1Δ mutants by cycloheximide chase experiments. Since a fraction of Utr2/Crh2-GFP properly localizes to the cell wall in an ire1Δ mutant, extracellular secretion appears to occur through a pathway that is distinct from the normal GPI protein-trafficking pathway. Taken together, these data support a model in which the unfolded protein response (UPR)/yapsin-mediated extracellular release of overexpressed Utr2/Crh2-HA or -GFP is an alternative pathway for the removal of excess or misfolded secretory proteins functioning in parallel with proteasome-mediated degradation in S. cerevisiae. This model provides an explanation for the deleterious effects of Yps1/2p on the industrial production of some recombinant proteins in S. cerevisiae.


Assuntos
Glicosídeo Hidrolases/metabolismo , Proteínas de Saccharomyces cerevisiae/metabolismo , Saccharomyces cerevisiae/metabolismo , Adenosina Trifosfatases/genética , Adenosina Trifosfatases/metabolismo , Ácido Aspártico Endopeptidases/genética , Ácido Aspártico Endopeptidases/metabolismo , Parede Celular/metabolismo , Retículo Endoplasmático/metabolismo , Espaço Extracelular/metabolismo , Genes Fúngicos , Glicosídeo Hidrolases/genética , Glicosilfosfatidilinositóis/metabolismo , Glicoproteínas de Membrana/genética , Glicoproteínas de Membrana/metabolismo , Modelos Biológicos , Proteínas Mutantes/genética , Proteínas Mutantes/metabolismo , Mutação , Proteínas Serina-Treonina Quinases/genética , Proteínas Serina-Treonina Quinases/metabolismo , Transporte Proteico , Proteínas Recombinantes de Fusão/genética , Proteínas Recombinantes de Fusão/metabolismo , Saccharomyces cerevisiae/genética , Proteínas de Saccharomyces cerevisiae/genética , Estresse Fisiológico , Resposta a Proteínas não Dobradas , Proteínas de Transporte Vesicular/genética , Proteínas de Transporte Vesicular/metabolismo
15.
J Trauma ; 69(4 Suppl): S206-8, 2010 Oct.
Artigo em Inglês | MEDLINE | ID: mdl-20938309

RESUMO

BACKGROUND: Sledding is a popular and seeming innocuous winter sport, but we hypothesize that sled injuries are much like bicycle injuries. Current literature supports helmet usage in other winter sports, but little information can be found to clarify the use of helmets in sledding. The objectives of the study are to assess the injury patterns of sled riders and clarify the need for helmet usage and to locate specific geographic catchments in which resources can be better focused. METHODS: After Institutional Review Board approval, the registry of a Level I pediatric trauma center was evaluated from 2000 to 2005. Information regarding unhelmeted bicyclists and sled riders was obtained. Injuries involving motorized vehicles were excluded. Demographics, injury patterns, and outcomes were evaluated. Descriptive statistics, Student's t test, and Fisher's exact or χ² analyses were preformed. GIS evaluation was performed using ArcGIS. Statistical significance was defined as p < 0.05. RESULTS: One hundred thirty-six patients sustained trauma on sleds; 509 patients were injured on bicycles. Head injuries represented the largest percentage of injuries in both groups. Handlebar- or crossbar-related injuries (abdomen and perineum) were more common in the bicycle group. Injuries occurred with equal frequency in urban and rural regions. CONCLUSION: We conclude that the injury patterns between sledding and unhelmeted bicycling are similar. Helmet usage is strongly recommended to prevent head injuries to bike riders; therefore, this study supports the routine usage of helmets in sledding and the need for widespread education on helmet usage in both rural and urban regions.


Assuntos
Traumatismos Craniocerebrais/epidemiologia , Dispositivos de Proteção da Cabeça/estatística & dados numéricos , Esportes na Neve/lesões , Adolescente , Ciclismo/lesões , Área Programática de Saúde , Criança , Pré-Escolar , Estudos de Coortes , Traumatismos Craniocerebrais/diagnóstico , Traumatismos Craniocerebrais/prevenção & controle , Sistemas de Informação Geográfica , Hospitalização/estatística & dados numéricos , Humanos , Lactente , Escala de Gravidade do Ferimento , Estudos Retrospectivos
16.
Curr Opin Microbiol ; 47: 66-73, 2019 02.
Artigo em Inglês | MEDLINE | ID: mdl-30711745

RESUMO

Mounting evidence suggests that Type 3 Secretion Systems (T3SS) are widespread among Vibrio species, and are present in strains isolated from diverse sources such as human clinical infections, environmental reservoirs, and diseased marine life. Experiments evaluating Vibrio parahaemolyticus and Vibrio cholerae T3SS mediated virulence suggest that Vibrio T3SS pathogenicity islands have a tripartite composition. A conserved 'core' region encodes functions essential for colonization and disease in vivo, including modulation of innate immune signaling pathways and actin dynamics, whereas regions flanking core sequences are variable among strains and encode effector proteins performing a diverse array of activities. Characterizing novel functions associated with Vibrio-specific effectors is, therefore, essential for understanding how vibrios employ T3SS mechanisms to cause disease in a broad range of hosts and how T3SS island composition potentially defines species-specific disease.


Assuntos
Interações Hospedeiro-Patógeno , Sistemas de Secreção Tipo III/metabolismo , Vibrio cholerae/crescimento & desenvolvimento , Vibrio parahaemolyticus/crescimento & desenvolvimento , Fatores de Virulência/metabolismo , Animais , Humanos , Evasão da Resposta Imune , Vibrio cholerae/metabolismo , Vibrio parahaemolyticus/metabolismo , Virulência
17.
Comb Chem High Throughput Screen ; 9(1): 27-36, 2006 Jan.
Artigo em Inglês | MEDLINE | ID: mdl-16454684

RESUMO

Lipopolysaccharides (LPS), otherwise termed 'endotoxins', are an integral part of the outer leaflet of the outer-membrane of Gram-negative bacteria. Lipopolysaccharides play a pivotal role in the pathogenesis of 'Septic Shock', a major cause of mortality in the critically ill patient, worldwide. The sequestration of circulatory endotoxin may be a viable therapeutic strategy for the prophylaxis and treatment of Gram-negative sepsis. We have earlier shown that the pharmacophore necessary for small molecules to bind LPS involves two protonatable cationic functions separated by about 15 A, permitting the simultaneous interaction with the negatively charged phosphates on lipid A, the toxically active center of endotoxin. In this report, screening of a multi-thousand membered polyamine library through the combined use of computational and bioassay-guided screens resulted in the discovery of two novel classes of LPS-binding agents. These are represented by the 1) spermine sulfonamides and 2) C-aryl-substituted spermine analogs. We present the selection approach, screening results, computational multivariate analyses and initial structure-activity relationship evaluation herein.


Assuntos
Antitoxinas/farmacologia , Lipopolissacarídeos/antagonistas & inibidores , Lipopolissacarídeos/química , Poliaminas/química , Espermina/farmacologia , Antitoxinas/química , Simulação por Computador , Cristalografia por Raios X , Avaliação Pré-Clínica de Medicamentos , Modelos Moleculares , Estrutura Molecular , Análise Multivariada , Espermina/análogos & derivados , Espermina/química , Relação Estrutura-Atividade
18.
Nat Microbiol ; 1(10): 16134, 2016 08 08.
Artigo em Inglês | MEDLINE | ID: mdl-27670115

RESUMO

Spirochaetes are bacteria responsible for several serious diseases, including Lyme disease (Borrelia burgdorferi), syphilis (Treponema pallidum) and leptospirosis (Leptospira interrogans), and contribute to periodontal diseases (Treponema denticola)(1). These spirochaetes employ an unusual form of flagella-based motility necessary for pathogenicity; indeed, spirochaete flagella (periplasmic flagella) reside and rotate within the periplasmic space(2-11). The universal joint or hook that links the rotary motor to the filament is composed of ∼120-130 FlgE proteins, which in spirochaetes form an unusually stable, high-molecular-weight complex(9,12-17). In other bacteria, the hook can be readily dissociated by treatments such as heat(18). In contrast, spirochaete hooks are resistant to these treatments, and several lines of evidence indicate that the high-molecular-weight complex is the consequence of covalent crosslinking(12,13,17). Here, we show that T. denticola FlgE self-catalyses an interpeptide crosslinking reaction between conserved lysine and cysteine, resulting in the formation of an unusual lysinoalanine adduct that polymerizes the hook subunits. Lysinoalanine crosslinks are not needed for flagellar assembly, but they are required for cell motility and hence infection. The self-catalytic nature of FlgE crosslinking has important implications for protein engineering, and its sensitivity to chemical inhibitors provides a new avenue for the development of antimicrobials targeting spirochaetes.


Assuntos
Proteínas de Bactérias/metabolismo , Flagelos/química , Lisinoalanina/metabolismo , Spirochaeta/metabolismo , Proteínas de Bactérias/química , Biocatálise , Borrelia burgdorferi/metabolismo , Flagelos/fisiologia , Lisinoalanina/química , Movimento , Spirochaeta/patogenicidade , Treponema denticola/metabolismo
19.
J Med Chem ; 48(7): 2589-99, 2005 Apr 07.
Artigo em Inglês | MEDLINE | ID: mdl-15801849

RESUMO

Lipopolysaccharides (LPS), otherwise termed "endotoxins", are outer membrane constituents of Gram-negative bacteria. Lipopolysaccharides play a key role in the pathogenesis of "septic shock", a major cause of mortality in the critically ill patient. Therapeutic options aimed at limiting downstream systemic inflammatory processes by targeting lipopolysaccharide do not exist at the present time. We have defined the pharmacophore necessary for small molecules to specifically bind and neutralize LPS and, using animal models of sepsis, have shown that the sequestration of circulatory LPS by small molecules is a therapeutically viable strategy. In this paper, the interactions of a series of acylated homologated spermine compounds with LPS have been characterized. The optimal acyl chain length for effective sequestration of LPS was identified to be C(16) for the monoacyl compounds. The most promising of these compounds, 4e, binds LPS with an ED(50) of 1.37 muM. Nitric oxide production in murine J774A.1 cells, as well as TNF-alpha in human blood, is inhibited in a dose-dependent manner by 4e at concentrations orders of magnitude lower than toxic doses. Administration of 4e to d-galactosamine-sensitized mice challenged with supralethal doses of LPS provided significant protection against lethality. Potent antiendotoxic activity, low toxicity, and ease of synthesis render this class of compounds candidate endotoxin-sequestering agents of potential significant therapeutic value.


Assuntos
Amidas/síntese química , Lipopolissacarídeos/antagonistas & inibidores , Espermina/análogos & derivados , Espermina/síntese química , Amidas/química , Amidas/farmacologia , Amidas/toxicidade , Animais , Linhagem Celular , Sobrevivência Celular/efeitos dos fármacos , Escherichia coli , Feminino , Hemólise , Humanos , Técnicas In Vitro , Lipídeo A/antagonistas & inibidores , Lipídeo A/metabolismo , Lipopolissacarídeos/metabolismo , Camundongos , Óxido Nítrico/antagonistas & inibidores , Óxido Nítrico/biossíntese , Sepse/mortalidade , Sepse/prevenção & controle , Espermina/química , Espermina/farmacologia , Espermina/toxicidade , Relação Estrutura-Atividade , Propriedades de Superfície , Fator de Necrose Tumoral alfa/antagonistas & inibidores
20.
mBio ; 6(2): e02584, 2015 Mar 03.
Artigo em Inglês | MEDLINE | ID: mdl-25736891

RESUMO

UNLABELLED: Entry into cells is critical for virulence of the human bacterial pathogens Shigella spp. Shigella spp. induce membrane ruffle formation and macropinocytic uptake, but the events instigating this process are incompletely understood. The host small GTPase ADP-ribosylation factor 6 (ARF6) functions in membrane trafficking at the plasma membrane and activates membrane ruffle formation. We demonstrate that ARF6 is required for efficient Shigella flexneri entry, is activated by S. flexneri dependent on the phosphatase activity of the type III secreted effector IpgD, and depends on cytohesin guanine nucleotide exchange factors (GEFs) for recruitment to entry sites. The cytohesin GEF ARF nucleotide binding site opener (ARNO) is recruited to these sites, also dependent on IpgD phosphatase activity. ARNO recruitment is independent of ARF6, indicating that, in addition to the described recruitment of ARNO by ARF6, ARNO is recruited upstream of ARF6. Our data provide evidence that ARF6, IpgD, phosphoinositide species, and ARNO constitute a previously undescribed positive feedback loop that amplifies ARF6 activation at bacterial entry sites, thereby promoting efficient S. flexneri uptake. IMPORTANCE: Shigella spp. cause diarrhea and dysentery by infection of epithelial cells in the human colon. Critical to disease is the ability of Shigella to enter into cells, yet the mechanisms involved in entry are incompletely understood. We demonstrate that the small GTPase ADP-ribosylation factor 6 (ARF6) is required for efficient cellular entry of Shigella flexneri and that activation of ARF6 depends on the phosphatase activity of the Shigella protein IpgD, which is introduced into cells via the bacterial type III secretion system. We further show that IpgD phosphatase activity is required for recruitment of the ARF6 guanine nucleotide exchange factor (GEF) ARF nucleotide binding site opener (ARNO) to bacterial entry sites and that ARNO lies upstream of ARF6 activation. These relationships define a positive feedback loop that contributes to activation of ARF6 at S. flexneri entry sites and leads to local amplification of signals that promote bacterial entry.


Assuntos
Fatores de Ribosilação do ADP/metabolismo , Proteínas de Bactérias/metabolismo , Endocitose , Proteínas Ativadoras de GTPase/metabolismo , Interações Hospedeiro-Patógeno , Monoéster Fosfórico Hidrolases/metabolismo , Shigella flexneri/fisiologia , Fatores de Virulência/metabolismo , Fator 6 de Ribosilação do ADP , Células Epiteliais/microbiologia , Células Epiteliais/fisiologia , Células HeLa , Humanos , Modelos Biológicos , Fosfatidilinositóis/metabolismo
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