Detalhe da pesquisa
1.
Design, construction, and functional characterization of a tRNA neochromosome in yeast.
Cell
; 186(24): 5237-5253.e22, 2023 11 22.
Artigo
em Inglês
| MEDLINE | ID: mdl-37944512
2.
Multiscale Structuring of the E. coli Chromosome by Nucleoid-Associated and Condensin Proteins.
Cell
; 172(4): 771-783.e18, 2018 02 08.
Artigo
em Inglês
| MEDLINE | ID: mdl-29358050
3.
In silico design of DNA sequences for in vivo nucleosome positioning.
Nucleic Acids Res
; 2024 Jun 03.
Artigo
em Inglês
| MEDLINE | ID: mdl-38828788
4.
P-Body Purification Reveals the Condensation of Repressed mRNA Regulons.
Mol Cell
; 68(1): 144-157.e5, 2017 Oct 05.
Artigo
em Inglês
| MEDLINE | ID: mdl-28965817
5.
Genome-wide prediction of DNA mutation effect on nucleosome positions for yeast synthetic genomics.
Genome Res
; 31(2): 317-326, 2021 Feb.
Artigo
em Inglês
| MEDLINE | ID: mdl-33355297
6.
Improving distance measures between genomic tracks with mutual proximity.
Brief Bioinform
; 22(6)2021 11 05.
Artigo
em Inglês
| MEDLINE | ID: mdl-34308963
7.
Contribution of 3D genome topological domains to genetic risk of cancers: a genome-wide computational study.
Hum Genomics
; 16(1): 2, 2022 01 11.
Artigo
em Inglês
| MEDLINE | ID: mdl-35016721
8.
Condensin- and Replication-Mediated Bacterial Chromosome Folding and Origin Condensation Revealed by Hi-C and Super-resolution Imaging.
Mol Cell
; 59(4): 588-602, 2015 Aug 20.
Artigo
em Inglês
| MEDLINE | ID: mdl-26295962
9.
keras_dna: a wrapper for fast implementation of deep learning models in genomics.
Bioinformatics
; 37(11): 1593-1594, 2021 07 12.
Artigo
em Inglês
| MEDLINE | ID: mdl-33135730
10.
MNHN-Tree-Tools: a toolbox for tree inference using multi-scale clustering of a set of sequences.
Bioinformatics
; 37(21): 3947-3949, 2021 11 05.
Artigo
em Inglês
| MEDLINE | ID: mdl-34100911
11.
Cohesins and condensins orchestrate the 4D dynamics of yeast chromosomes during the cell cycle.
EMBO J
; 36(18): 2684-2697, 2017 09 15.
Artigo
em Inglês
| MEDLINE | ID: mdl-28729434
12.
High-salt-recovered sequences are associated with the active chromosomal compartment and with large ribonucleoprotein complexes including nuclear bodies.
Genome Res
; 28(11): 1733-1746, 2018 11.
Artigo
em Inglês
| MEDLINE | ID: mdl-30287550
13.
Characterizing meiotic chromosomes' structure and pairing using a designer sequence optimized for Hi-C.
Mol Syst Biol
; 14(7): e8293, 2018 07 16.
Artigo
em Inglês
| MEDLINE | ID: mdl-30012718
14.
Kinetic Signature of Cooperativity in the Irreversible Collapse of a Polymer.
Phys Rev Lett
; 121(5): 057801, 2018 Aug 03.
Artigo
em Inglês
| MEDLINE | ID: mdl-30118310
15.
The 3D folding of metazoan genomes correlates with the association of similar repetitive elements.
Nucleic Acids Res
; 44(1): 245-55, 2016 Jan 08.
Artigo
em Inglês
| MEDLINE | ID: mdl-26609133
16.
3D genome reconstruction from chromosomal contacts.
Nat Methods
; 11(11): 1141-3, 2014 Nov.
Artigo
em Inglês
| MEDLINE | ID: mdl-25240436
17.
High-throughput chromatin motion tracking in living yeast reveals the flexibility of the fiber throughout the genome.
Genome Res
; 23(11): 1829-38, 2013 Nov.
Artigo
em Inglês
| MEDLINE | ID: mdl-24077391
18.
DNA topology in chromosomes: a quantitative survey and its physiological implications.
J Math Biol
; 68(1-2): 145-79, 2014 Jan.
Artigo
em Inglês
| MEDLINE | ID: mdl-23179130
19.
Transcription-induced domains form the elementary constraining building blocks of bacterial chromosomes.
Nat Struct Mol Biol
; 31(3): 489-497, 2024 Mar.
Artigo
em Inglês
| MEDLINE | ID: mdl-38177686
20.
Molecular crowding affects diffusion and binding of nuclear proteins in heterochromatin and reveals the fractal organization of chromatin.
EMBO J
; 28(24): 3785-98, 2009 Dec 16.
Artigo
em Inglês
| MEDLINE | ID: mdl-19927119