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1.
Proc Natl Acad Sci U S A ; 119(27): e2123469119, 2022 07 05.
Artigo em Inglês | MEDLINE | ID: mdl-35771939

RESUMO

Biofilm formation is an important and ubiquitous mode of growth among bacteria. Central to the evolutionary advantage of biofilm formation is cell-cell and cell-surface adhesion achieved by a variety of factors, some of which are diffusible compounds that may operate as classical public goods-factors that are costly to produce but may benefit other cells. An outstanding question is how diffusible matrix production, in general, can be stable over evolutionary timescales. In this work, using Vibrio cholerae as a model, we show that shared diffusible biofilm matrix proteins are indeed susceptible to cheater exploitation and that the evolutionary stability of producing these matrix components fundamentally depends on biofilm spatial structure, intrinsic sharing mechanisms of these components, and flow conditions in the environment. We further show that exploitation of diffusible adhesion proteins is localized within a well-defined spatial range around cell clusters that produce them. Based on this exploitation range and the spatial distribution of cell clusters, we constructed a model of costly diffusible matrix production and related these length scales to the relatedness coefficient in social evolution theory. Our results show that production of diffusible biofilm matrix components is evolutionarily stable under conditions consistent with natural biofilm habitats and host environments. We expect the mechanisms revealed in this study to be relevant to other secreted factors that operate as cooperative public goods in bacterial communities and the concept of exploitation range and the associated analysis tools to be generally applicable.


Assuntos
Bactérias , Matriz Extracelular de Substâncias Poliméricas , Evolução Social , Bactérias/crescimento & desenvolvimento , Modelos Biológicos , Vibrio cholerae
2.
J Biol Chem ; 294(40): 14499-14511, 2019 10 04.
Artigo em Inglês | MEDLINE | ID: mdl-31439670

RESUMO

Growth of the cholera bacterium Vibrio cholerae in a biofilm community contributes to both its pathogenicity and survival in aquatic environmental niches. The major components of V. cholerae biofilms include Vibriopolysaccharide (VPS) and the extracellular matrix proteins RbmA, RbmC, and Bap1. To further elucidate the previously observed overlapping roles of Bap1 and RbmC in biofilm architecture and surface attachment, here we investigated the structural and functional properties of Bap1. Soluble expression of Bap1 was possible only after the removal of an internal 57-amino-acid-long hydrophobic insertion sequence. The crystal structure of Bap1 at 1.9 Å resolution revealed a two-domain assembly made up of an eight-bladed ß-propeller interrupted by a ß-prism domain. The structure also revealed metal-binding sites within canonical calcium blade motifs, which appear to have structural rather than functional roles. Contrary to results previously observed with RbmC, the Bap1 ß-prism domain did not exhibit affinity for complex N-glycans, suggesting an altered role of this domain in biofilm-surface adhesion. Native polyacrylamide gel shift analysis did suggest that Bap1 exhibits lectin activity with a preference for anionic or linear polysaccharides. Our results suggest a model for V. cholerae biofilms in which Bap1 and RbmC play dominant but differing adhesive roles in biofilms, allowing bacterial attachment to diverse environmental or host surfaces.


Assuntos
Proteínas de Bactérias/ultraestrutura , Cólera/enzimologia , Proteínas da Matriz Extracelular/ultraestrutura , Conformação Proteica , Vibrio cholerae/enzimologia , Sequência de Aminoácidos/genética , Amiloide/química , Aderência Bacteriana/genética , Proteínas de Bactérias/química , Proteínas de Bactérias/genética , Sítios de Ligação/genética , Biofilmes , Cólera/genética , Cólera/microbiologia , Cristalografia por Raios X , Proteínas da Matriz Extracelular/química , Regulação Bacteriana da Expressão Gênica/genética , Lectinas/química , Metais/química , Polissacarídeos/química , Vibrio cholerae/química , Vibrio cholerae/genética , Vibrio cholerae/patogenicidade , Fatores de Virulência/genética
3.
PLoS Pathog ; 14(2): e1006841, 2018 02.
Artigo em Inglês | MEDLINE | ID: mdl-29432487

RESUMO

Vibrio cholerae is an aquatic gram-negative microbe responsible for cholera, a pandemic disease causing life-threatening diarrheal outbreaks in populations with limited access to health care. Like most pathogenic bacteria, V. cholerae secretes virulence factors to assist colonization of human hosts, several of which bind carbohydrate receptors found on cell-surfaces. Understanding how pathogenic virulence proteins specifically target host cells is important for the development of treatment strategies to fight bacterial infections. Vibrio cholerae cytolysin (VCC) is a secreted pore-forming toxin with a carboxy-terminal ß-prism domain that targets complex N-glycans found on mammalian cell-surface proteins. To investigate glycan selectivity, we studied the VCC ß-prism domain and two additional ß-prism domains found within the V. cholerae biofilm matrix protein RbmC. We show that the two RbmC ß-prism domains target a similar repertoire of complex N-glycan receptors as VCC and find through binding and modeling studies that a branched pentasaccharide core (GlcNAc2-Man3) represents the likely footprint interacting with these domains. To understand the structural basis of V. cholerae ß-prism selectivity, we solved high-resolution crystal structures of fragments of the pentasaccharide core bound to one RbmC ß-prism domain and conducted mutagenesis experiments on the VCC toxin. Our results highlight a common strategy for cell-targeting utilized by both toxin and biofilm matrix proteins in Vibrio cholerae and provide a structural framework for understanding the specificity for individual receptors. Our results suggest that a common strategy for disrupting carbohydrate interactions could affect multiple virulence factors produced by V. cholerae, as well as similar ß-prism domains found in other vibrio pathogens.


Assuntos
Biofilmes , Citotoxinas/metabolismo , Modelos Moleculares , Perforina/metabolismo , Polissacarídeos/metabolismo , Receptores de Superfície Celular/metabolismo , Vibrio cholerae/fisiologia , Sequência de Aminoácidos , Substituição de Aminoácidos , Animais , Sítios de Ligação , Células Sanguíneas/metabolismo , Cristalografia por Raios X , Citotoxinas/química , Citotoxinas/genética , Cinética , Mutação , Fragmentos de Peptídeos/química , Fragmentos de Peptídeos/genética , Fragmentos de Peptídeos/metabolismo , Perforina/química , Perforina/genética , Polissacarídeos/química , Domínios e Motivos de Interação entre Proteínas , Coelhos , Receptores de Superfície Celular/antagonistas & inibidores , Receptores de Superfície Celular/química , Proteínas Recombinantes de Fusão/química , Proteínas Recombinantes de Fusão/metabolismo , Alinhamento de Sequência , Homologia de Sequência de Aminoácidos , Vibrio cholerae/imunologia , Vibrio cholerae/patogenicidade , Fatores de Virulência/química , Fatores de Virulência/genética , Fatores de Virulência/metabolismo
4.
Biochemistry ; 55(9): 1291-300, 2016 Mar 08.
Artigo em Inglês | MEDLINE | ID: mdl-26854513

RESUMO

Signal peptides are critical for the initiation of protein transport in bacteria by virtue of their recognition by the SecA ATPase motor protein followed by their transfer to the lateral gate region of the SecYEG protein-conducting channel complex. In this study, we have constructed and validated the use of signal peptide-attached SecA chimeras for conducting structural and functional studies on the initial step of SecA signal peptide interaction. We utilized this system to map the location and orientation of the bound alkaline phosphatase and KRRLamB signal peptides to a peptide-binding groove adjacent to the two-helix finger subdomain of SecA. These results support the existence of a single conserved SecA signal peptide-binding site that positions the signal peptide parallel to the two-helix finger subdomain of SecA, and they are also consistent with the proposed role of this subdomain in the transfer of the bound signal peptide from SecA into the protein-conducting channel of SecYEG protein. In addition, our work highlights the utility of this system to conveniently engineer and study the interaction of SecA with any signal peptide of interest as well as its potential use for X-ray crystallographic studies given issues with exogenous signal peptide solubility.


Assuntos
Adenosina Trifosfatases/química , Adenosina Trifosfatases/metabolismo , Proteínas de Bactérias/química , Proteínas de Bactérias/metabolismo , Quimera/metabolismo , Transferência Ressonante de Energia de Fluorescência/métodos , Proteínas de Membrana Transportadoras/química , Proteínas de Membrana Transportadoras/metabolismo , Engenharia de Proteínas/métodos , Transdução de Sinais/fisiologia , Adenosina Trifosfatases/genética , Proteínas de Bactérias/genética , Sítios de Ligação/fisiologia , Quimera/genética , Proteínas de Membrana Transportadoras/genética , Estrutura Secundária de Proteína , Canais de Translocação SEC , Proteínas SecA
5.
J Biol Chem ; 290(47): 28402-28415, 2015 Nov 20.
Artigo em Inglês | MEDLINE | ID: mdl-26416894

RESUMO

Bacterial pore-forming toxins (PFTs) are structurally diverse pathogen-secreted proteins that form cell-damaging channels in the membranes of host cells. Most PFTs are released as water-soluble monomers that first oligomerize on the membrane before inserting a transmembrane channel. To modulate specificity and increase potency, many PFTs recognize specific cell surface receptors that increase the local toxin concentration on cell membranes, thereby facilitating channel formation. Vibrio cholerae cytolysin (VCC) is a toxin secreted by the human pathogen responsible for pandemic cholera disease and acts as a defensive agent against the host immune system. Although it has been shown that VCC utilizes specific glycan receptors on the cell surface, additional direct contacts with the membrane must also play a role in toxin binding. To better understand the nature of these interactions, we conducted a systematic investigation of the membrane-binding surface of VCC to identify additional membrane interactions important in cell targeting. Through cell-based assays on several human-derived cell lines, we show that VCC is unlikely to utilize high affinity protein receptors as do structurally similar toxins from Staphylococcus aureus. Next, we identified a number of specific amino acid residues that greatly diminish the VCC potency against cells and investigated the interplay between glycan binding and these direct lipid contacts. Finally, we used model membranes to parse the importance of these key residues in lipid and cholesterol binding. Our study provides a complete functional map of the VCC membrane-binding surface and insights into the integration of sugar, lipid, and cholesterol binding interactions.


Assuntos
Citotoxinas/metabolismo , Canais Iônicos/metabolismo , Polissacarídeos/metabolismo , Vibrio cholerae/metabolismo , Sequência de Aminoácidos , Linhagem Celular , Citotoxinas/química , Humanos , Neutrófilos/metabolismo , Ligação Proteica , Ressonância de Plasmônio de Superfície
6.
Proc Natl Acad Sci U S A ; 108(18): 7385-90, 2011 May 03.
Artigo em Inglês | MEDLINE | ID: mdl-21502531

RESUMO

Pore-forming toxins (PFTs) are potent cytolytic agents secreted by pathogenic bacteria that protect microbes against the cell-mediated immune system (by targeting phagocytic cells), disrupt epithelial barriers, and liberate materials necessary to sustain growth and colonization. Produced by gram-positive and gram-negative bacteria alike, PFTs are released as water-soluble monomeric or dimeric species, bind specifically to target membranes, and assemble transmembrane channels leading to cell damage and/or lysis. Structural and biophysical analyses of individual steps in the assembly pathway are essential to fully understanding the dynamic process of channel formation. To work toward this goal, we solved by X-ray diffraction the 2.9-Å structure of the 450-kDa heptameric Vibrio cholerae cytolysin (VCC) toxin purified and crystallized in the presence of detergent. This structure, together with our previously determined 2.3-Å structure of the VCC water-soluble monomer, reveals in detail the architectural changes that occur within the channel region and accessory lectin domains during pore formation including substantial rearrangements of hydrogen-bonding networks in the pore-forming amphipathic loops. Interestingly, a ring of tryptophan residues forms the narrowest constriction in the transmembrane channel reminiscent of the phenylalanine clamp identified in anthrax protective antigen [Krantz BA, et al. (2005) Science 309:777-781]. Our work provides an example of a ß-barrel PFT (ß-PFT) for which soluble and assembled structures are available at high-resolution, providing a template for investigating intermediate steps in assembly.


Assuntos
Modelos Moleculares , Proteínas Citotóxicas Formadoras de Poros/química , Proteínas Citotóxicas Formadoras de Poros/isolamento & purificação , Conformação Proteica , Vibrio cholerae/química , Sequência de Aminoácidos , Cristalização , Dados de Sequência Molecular , Difração de Raios X
7.
Nat Commun ; 14(1): 2104, 2023 04 13.
Artigo em Inglês | MEDLINE | ID: mdl-37055389

RESUMO

Bacterial biofilms are formed on environmental surfaces and host tissues, and facilitate host colonization and antibiotic resistance by human pathogens. Bacteria often express multiple adhesive proteins (adhesins), but it is often unclear whether adhesins have specialized or redundant roles. Here, we show how the model biofilm-forming organism Vibrio cholerae uses two adhesins with overlapping but distinct functions to achieve robust adhesion to diverse surfaces. Both biofilm-specific adhesins Bap1 and RbmC function as a "double-sided tape": they share a ß-propeller domain that binds to the biofilm matrix exopolysaccharide, but have distinct environment-facing domains. Bap1 adheres to lipids and abiotic surfaces, while RbmC mainly mediates binding to host surfaces. Furthermore, both adhesins contribute to adhesion in an enteroid monolayer colonization model. We expect that similar modular domains may be utilized by other pathogens, and this line of research can potentially lead to new biofilm-removal strategies and biofilm-inspired adhesives.


Assuntos
Vibrio cholerae , Humanos , Vibrio cholerae/metabolismo , Proteínas de Bactérias/metabolismo , Biofilmes , Adesinas Bacterianas , Polissacarídeos/química
8.
Protein Sci ; 30(5): 990-1005, 2021 05.
Artigo em Inglês | MEDLINE | ID: mdl-33733504

RESUMO

The C-terminal domain of Bacillus cereus hemolysin II (HlyIIC), stabilizes the trans-membrane-pore formed by the HlyII toxin and may aid in target cell recognition. Initial efforts to determine the NMR structure of HlyIIC were hampered by cis/trans isomerization about the single proline at position 405 that leads to doubling of NMR resonances. We used the mutant P405M-HlyIIC that eliminates the cis proline to determine the NMR structure of the domain, which revealed a novel fold. Here, we extend earlier studies to the NMR structure determination of the cis and trans states of WT-HlyIIC that exist simultaneously in solution. The primary structural differences between the cis and trans states are in the loop that contains P405, and structurally adjacent loops. Thermodynamic linkage analysis shows that at 25 C the cis proline, which already has a large fraction of 20% in the unfolded protein, increases to 50% in the folded state due to coupling with the global stability of the domain. The P405M or P405A substitutions eliminate heterogeneity due to proline isomerization but lead to the formation of a new dimeric species. The NMR structure of the dimer shows that it is formed through domain-swapping of strand ß5, the last segment of secondary structure following P405. The presence of P405 in WT-HlyIIC strongly disfavors the dimer compared to the P405M-HlyIIC or P405A-HlyIIC mutants. The WT proline may thus act as a "gatekeeper," warding off aggregative misfolding.


Assuntos
Bacillus cereus/química , Proteínas de Bactérias/química , Proteínas Hemolisinas/química , Ressonância Magnética Nuclear Biomolecular , Substituição de Aminoácidos , Bacillus cereus/genética , Proteínas de Bactérias/genética , Proteínas Hemolisinas/genética , Mutação de Sentido Incorreto , Domínios Proteicos
9.
Front Microbiol ; 12: 686793, 2021.
Artigo em Inglês | MEDLINE | ID: mdl-34305846

RESUMO

Bacterial biofilms are communities of cells enclosed in an extracellular polymeric matrix in which cells adhere to each other and to foreign surfaces. The development of a biofilm is a dynamic process that involves multiple steps, including cell-surface attachment, matrix production, and population expansion. Increasing evidence indicates that biofilm adhesion is one of the main factors contributing to biofilm-associated infections in clinics and biofouling in industrial settings. This review focuses on describing biofilm adhesion strategies among different bacteria, including Vibrio cholerae, Pseudomonas aeruginosa, and Staphylococcus aureus. Techniques used to characterize biofilm adhesion are also reviewed. An understanding of biofilm adhesion strategies can guide the development of novel approaches to inhibit or manipulate biofilm adhesion and growth.

10.
J Struct Biol ; 169(1): 6-13, 2010 Jan.
Artigo em Inglês | MEDLINE | ID: mdl-19616104

RESUMO

Vibrio cholerae cytolysin (VCC) is a pore-forming toxin that inserts a lytic water-filled channel into susceptible host membranes. Assembly of the toxin on cell surfaces may be enhanced by two tandem lectin domains, in addition to direct interactions with lipids and cholesterol within the membrane itself. We used single-particle electron cryomicroscopy (cryoEM) to generate a low-resolution molecular structure of the detergent-solubilized VCC oligomer to 20A resolution. After confirming a heptameric arrangement of individual protomers, sevenfold averaging around the central pore was utilized to improve the structure. Docking of the previously determined VCC protoxin crystal structure was possible with rigid-body rearrangements between the cytolytic and lectin domains. A second cryoEM reconstruction of a truncated VCC mutant supported the topology of our model in which the carboxyl-terminal lectin domain forms "spikes" around the toxin core with the putative carbohydrate receptor-binding site accessible on the surface of the oligomer. This finding points to an assembly mechanism in which lectin domains may remain bound to receptors on the cell surface throughout assembly of the cytolytic toxin core and explains the hemagglutinating activity of purified toxin. Our model provides an insight into the structural rearrangements that accompany VCC-mediated cytolysis and may aid in the engineering of novel pore-forming toxins to attack specific cells towards therapeutic ends.


Assuntos
Microscopia Crioeletrônica , Detergentes/química , Perforina/química , Perforina/ultraestrutura , Vibrio cholerae/química , Sítios de Ligação , Cristalografia por Raios X , Modelos Moleculares , Multimerização Proteica , Solubilidade , Vibrio cholerae/metabolismo
11.
Nature ; 425(6954): 200-5, 2003 Sep 11.
Artigo em Inglês | MEDLINE | ID: mdl-12968185

RESUMO

The family of hyperpolarization-activated, cyclic nucleotide-modulated (HCN) channels are crucial for a range of electrical signalling, including cardiac and neuronal pacemaker activity, setting resting membrane electrical properties and dendritic integration. These nonselective cation channels, underlying the I(f), I(h) and I(q) currents of heart and nerve cells, are activated by membrane hyperpolarization and modulated by the binding of cyclic nucleotides such as cAMP and cGMP. The cAMP-mediated enhancement of channel activity is largely responsible for the increase in heart rate caused by beta-adrenergic agonists. Here we have investigated the mechanism underlying this modulation by studying a carboxy-terminal fragment of HCN2 containing the cyclic nucleotide-binding domain (CNBD) and the C-linker region that connects the CNBD to the pore. X-ray crystallographic structures of this C-terminal fragment bound to cAMP or cGMP, together with equilibrium sedimentation analysis, identify a tetramerization domain and the mechanism for cyclic nucleotide specificity, and suggest a model for ligand-dependent channel modulation. On the basis of amino acid sequence similarity to HCN channels, the cyclic nucleotide-gated, and eag- and KAT1-related families of channels are probably related to HCN channels in structure and mechanism.


Assuntos
AMP Cíclico/metabolismo , GMP Cíclico/metabolismo , Canais Iônicos/química , Canais Iônicos/metabolismo , Proteínas do Tecido Nervoso , Sequência de Aminoácidos , Animais , Sítios de Ligação , AMP Cíclico/farmacologia , GMP Cíclico/farmacologia , Canais de Cátion Regulados por Nucleotídeos Cíclicos , Condutividade Elétrica , Ligação de Hidrogênio , Canais Disparados por Nucleotídeos Cíclicos Ativados por Hiperpolarização , Ativação do Canal Iônico , Canais Iônicos/agonistas , Ligantes , Camundongos , Modelos Moleculares , Dados de Sequência Molecular , Técnicas de Patch-Clamp , Canais de Potássio , Conformação Proteica , Subunidades Proteicas/química , Subunidades Proteicas/metabolismo , Relação Estrutura-Atividade , Especificidade por Substrato
12.
Curr Opin Neurobiol ; 16(3): 351-7, 2006 Jun.
Artigo em Inglês | MEDLINE | ID: mdl-16698261

RESUMO

Major histocompatibility complex (MHC) molecules have been implicated in a number of non-immune roles in the central nervous system, particularly in synaptic development and plasticity. The discovery of M10 (50% sequence identity to classical MHC molecules) proteins expressed in the vomeronasal organ adds to the list of non-traditional roles of MHC homologs. M10 molecules associate with the V2R class of vomeronasal receptors, a family of G-protein coupled receptors thought to function as pheromone receptors. Recent studies showing that classical MHC-binding peptides activate V2R-expressing neurons offer tempting clues that M10s might participate directly in the recognition of pheromone ligands, but M10 proteins do not bind to these peptides with significant affinity. Instead of presenting MHC-binding peptides, M10s might function as molecular chaperones to V2R receptors or more generally as modulators of neuronal function, as demonstrated elsewhere in the brain for classical MHC molecules.


Assuntos
Encéfalo/metabolismo , Antígenos de Histocompatibilidade Classe I/metabolismo , Feromônios/metabolismo , Órgão Vomeronasal/metabolismo , Animais , Antígenos de Histocompatibilidade Classe I/química , Humanos , Modelos Moleculares , Chaperonas Moleculares/química , Chaperonas Moleculares/metabolismo , Estrutura Terciária de Proteína/fisiologia , Receptores de Feromônios/química , Receptores de Feromônios/metabolismo , Transdução de Sinais/fisiologia
13.
PLoS Biol ; 3(8): e257, 2005 Aug.
Artigo em Inglês | MEDLINE | ID: mdl-16089503

RESUMO

Neurons in the murine vomeronasal organ (VNO) express a family of class Ib major histocompatibility complex (MHC) proteins (M10s) that interact with the V2R class of VNO receptors. This interaction may play a direct role in the detection of pheromonal cues that initiate reproductive and territorial behaviors. The crystal structure of M10.5, an M10 family member, is similar to that of classical MHC molecules. However, the M10.5 counterpart of the MHC peptide-binding groove is open and unoccupied, revealing the first structure of an empty class I MHC molecule. Similar to empty MHC molecules, but unlike peptide-filled MHC proteins and non-peptide-binding MHC homologs, M10.5 is thermally unstable, suggesting that its groove is normally occupied. However, M10.5 does not bind endogenous peptides when expressed in mammalian cells or when offered a mixture of class I-binding peptides. The F pocket side of the M10.5 groove is open, suggesting that ligands larger than 8-10-mer class I-binding peptides could fit by extending out of the groove. Moreover, variable residues point up from the groove helices, rather than toward the groove as in classical MHC structures. These data suggest that M10s are unlikely to provide specific recognition of class I MHC-binding peptides, but are consistent with binding to other ligands, including proteins such as the V2Rs.


Assuntos
Antígenos de Histocompatibilidade Classe I/química , Receptores de Feromônios/metabolismo , Animais , Sítios de Ligação , Células CHO , Cricetinae , Cricetulus , Cristalografia por Raios X , Genes MHC Classe I , Antígenos de Histocompatibilidade Classe I/isolamento & purificação , Antígenos de Histocompatibilidade Classe I/metabolismo , Camundongos , Modelos Moleculares , Oligopeptídeos/metabolismo , Ligação Proteica , Estrutura Terciária de Proteína , Homologia de Sequência de Aminoácidos , Órgão Vomeronasal/metabolismo
14.
Sci Rep ; 7(1): 3277, 2017 06 12.
Artigo em Inglês | MEDLINE | ID: mdl-28607368

RESUMO

In addition to multiple virulence factors, Bacillus cereus a pathogen that causes food poisoning and life-threatening wound infections, secretes the pore-forming toxin hemolysin II (HlyII). The HlyII toxin has a unique 94 amino acid C-terminal domain (HlyIIC). HlyIIC exhibits splitting of NMR resonances due to cis/trans isomerization of a single proline near the C-terminus. To overcome heterogeneity, we solved the structure of P405M-HlyIIC, a mutant that exclusively stabilizes the trans state. The NMR structure of HlyIIC reveals a novel fold, consisting of two subdomains αA-ß1-ß2 and ß3-ß4-αB-ß5, that come together in a barrel-like structure. The barrel core is fastened by three layers of hydrophobic residues. The barrel end opposite the HlyIIC-core has a positively charged surface, that by binding negatively charged moieties on cellular membranes, may play a role in target-cell surface recognition or stabilization of the heptameric pore complex. In the WT domain, dynamic flexibility occurs at the N-terminus and the first α-helix that connects the HlyIIC domain to the HlyII-core structure. In the destabilizing P405M mutant, increased flexibility is evident throughout the first subdomain, suggesting that the HlyIIC structure may have arisen through gene fusion.


Assuntos
Bacillus cereus/metabolismo , Proteínas de Bactérias/química , Proteínas Hemolisinas/química , Ressonância Magnética Nuclear Biomolecular , Dobramento de Proteína , Bacillus cereus/genética , Proteínas de Bactérias/genética , Proteínas de Bactérias/metabolismo , Proteínas Hemolisinas/genética , Proteínas Hemolisinas/metabolismo , Hidrogênio/química , Interações Hidrofóbicas e Hidrofílicas , Isomerismo , Modelos Moleculares , Mutação , Conformação Proteica , Domínios e Motivos de Interação entre Proteínas , Eletricidade Estática
15.
J Mol Biol ; 350(5): 997-1016, 2005 Jul 29.
Artigo em Inglês | MEDLINE | ID: mdl-15978620

RESUMO

Pathogenic Vibrio cholerae secrete V. cholerae cytolysin (VCC), an 80 kDa pro-toxin that assembles into an oligomeric pore on target cell membranes following proteolytic cleavage and interaction with cell surface receptors. To gain insight into the activation and targeting activities of VCC, we solved the crystal structure of the pro-toxin at 2.3A by X-ray diffraction. The core cytolytic domain of VCC shares a fold similar to the staphylococcal pore-forming toxins, but in VCC an amino-terminal pro-domain and two carboxy-terminal lectin domains decorate the cytolytic domain. The pro-domain masks a protomer surface that likely participates in inter-protomer interactions in the cytolytic oligomer, thereby explaining why proteolytic cleavage and movement of the pro-domain is necessary for toxin activation. A single beta-octyl glucoside molecule outlines a possible receptor binding site on one lectin domain, and removal of this domain leads to a tenfold decrease in lytic activity toward rabbit erythrocytes. VCC activated by proteolytic cleavage assembles into an oligomeric species upon addition of soybean asolectin/cholesterol liposomes and this oligomer was purified in detergent micelles. Analytical ultracentrifugation and crystallographic analysis indicate that the resulting VCC oligomer is a heptamer. Taken together, these studies define the architecture of a pore forming toxin and associated lectin domains, confirm the stoichiometry of the assembled oligomer as heptameric, and suggest a common mechanism of assembly for staphylococcal and Vibrio cytolytic toxins.


Assuntos
Toxina da Cólera/química , Glicoproteínas de Membrana/química , Vibrio cholerae/patogenicidade , Animais , Proteínas de Bactérias/química , Sítios de Ligação , Domínio Catalítico , Cristalografia por Raios X , Dimerização , Eritrócitos/microbiologia , Lipossomos , Estrutura Molecular , Perforina , Proteínas Citotóxicas Formadoras de Poros , Estrutura Terciária de Proteína , Coelhos , Vibrio cholerae/química
16.
Protein Sci ; 12(2): 379-83, 2003 Feb.
Artigo em Inglês | MEDLINE | ID: mdl-12538902

RESUMO

The enteric pathogen Vibrio cholerae secretes a water-soluble 80-kD cytolysin, Vibrio cholerae cytolysin (VCC) that assembles into pentameric channels following proteolytic activation by exogenous proteases. Until now, VCC has been placed in a unique class of pore-forming toxins, distinct from paradigms such as Staphyloccal alpha-hemolysin. However, as reported here, amino acid sequence analysis and three-dimensional structure modeling indicate that the core component of the VCC toxin is related in sequence and structure to a family of hemolysins from Staphylococcus aureus that include leukocidin F and alpha-hemolysin. Furthermore, our analysis has identified the channel-forming region of VCC and a potential lipid head-group binding site, and suggests a conserved mechanism of assembly and lysis. An additional domain in the VCC toxin is related to plant lectins, conferring additional target cell specificity to the toxin.


Assuntos
Citotoxinas/química , Proteínas Hemolisinas/química , Vibrio cholerae/química , Sequência de Aminoácidos , Domínio Catalítico , Modelos Moleculares , Dados de Sequência Molecular , Estrutura Terciária de Proteína , Ricina/química , Alinhamento de Sequência , Homologia de Sequência
17.
Biomol NMR Assign ; 8(2): 419-23, 2014 Oct.
Artigo em Inglês | MEDLINE | ID: mdl-24234348

RESUMO

Pathogenic bacteria secrete pore-forming toxins (PFTs) to selectively defend against immune cells and to break through cellular barriers in the host. Understanding how PFTs attack cell membranes is not only essential for therapeutic intervention but for designing agents to deliver drugs to specific human cell subtypes, for example in anti-cancer or anti-viral therapies. Many toxins contain accessory domains that help recognize specific molecular epitopes on the membranes of target cells, including proteins, carbohydrates, and lipids. Here we report NMR assignments for the 94-residue 10 kDa C-terminal accessory domain of Bacillus cereus hemolysin II, HlyIIC, that has no known structural or functional homologues. The HlyIIC domain exists in a dynamic equilibrium due to cis/trans isomerization of its Gly86-Pro87 peptide bond. The cis and trans forms are about equally populated and are in slow exchange on the NMR timescale, giving rise to separate signals for approximately half of the residues in the domain. Assignments for the cis and trans forms were achieved with the aid of a P87M mutant that stabilizes the trans form, and separate sequential walks for the two forms in 3D NMR spectra of the wild-type HlyIIC. Based on backbone chemical shifts, the domain has a α1-α2-ß1-ß2-ß3-ß4-α3-ß5 order of secondary structure elements. The last strand in the trans form and in the P87M mutant is shortened near Pro87 compared to the cis form. Both cis/trans isomerization and the P87M mutation cause large chemical shift changes throughout HlyIIC, suggesting that the proline is important in stabilizing the structure of the domain. The NMR assignments pave the way for solving the structures of the multiple conformational forms of HlyIIC and establishing their mechanism of interconversion.


Assuntos
Proteínas de Bactérias/química , Proteínas Hemolisinas/química , Ressonância Magnética Nuclear Biomolecular , Sequência de Aminoácidos , Bacillus cereus , Dados de Sequência Molecular , Estrutura Terciária de Proteína , Estereoisomerismo
18.
J Mol Biol ; 426(15): 2800-12, 2014 Jul 29.
Artigo em Inglês | MEDLINE | ID: mdl-24862282

RESUMO

Pore-forming toxins (PFTs) are a class of pathogen-secreted molecules that oligomerize to form transmembrane channels in cellular membranes. Determining the mechanism for how PFTs bind membranes is important in understanding their role in disease and for developing possible ways to block their action. Vibrio vulnificus, an aquatic pathogen responsible for severe food poisoning and septicemia in humans, secretes a PFT called V. vulnificus hemolysin (VVH), which contains a single C-terminal targeting domain predicted to resemble a ß-trefoil lectin fold. In order to understand the selectivity of the lectin for glycan motifs, we expressed the isolated VVH ß-trefoil domain and used glycan-chip screening to identify that VVH displays a preference for terminal galactosyl groups including N-acetyl-d-galactosamine and N-acetyl-d-lactosamine. The X-ray crystal structure of the VVH lectin domain solved to 2.0Å resolution reveals a heptameric ring arrangement similar to the oligomeric form of the related, but inactive, lectin from Vibrio cholerae cytolysin. Structures bound to glycerol, N-acetyl-d-galactosamine, and N-acetyl-d-lactosamine outline a common and versatile mode of recognition allowing VVH to target a wide variety of cell-surface ligands. Sequence analysis in light of our structural and functional data suggests that VVH may represent an earlier step in the evolution of Vibrio PFTs.


Assuntos
Acetilgalactosamina/metabolismo , Amino Açúcares/metabolismo , Membrana Celular/metabolismo , Evolução Molecular , Glicerol/metabolismo , Proteínas Hemolisinas/metabolismo , Lectinas/metabolismo , Vibrio vulnificus/metabolismo , Acetilgalactosamina/química , Sequência de Aminoácidos , Amino Açúcares/química , Calorimetria , Cristalografia por Raios X , Glicerol/química , Proteínas Hemolisinas/química , Humanos , Lectinas/química , Modelos Moleculares , Dados de Sequência Molecular , Perforina/química , Filogenia , Homologia de Sequência de Aminoácidos , Ultracentrifugação , Vibrio cholerae/metabolismo
19.
J Mol Biol ; 425(5): 944-57, 2013 Mar 11.
Artigo em Inglês | MEDLINE | ID: mdl-23274141

RESUMO

Pathogens selectively target host cells using adhesion molecules and secreted virulence factors that may utilize protein, lipid, or carbohydrate ligands on the cell surface. The human intestinal pathogen Vibrio cholerae secretes a pore-forming toxin, V.cholerae cytolysin (VCC), which contains two domains that are structurally similar to known carbohydrate-binding proteins. These tandem domains are attached to the carboxy-terminus of the cytolytic domain and contain a ß-trefoil fold and a ß-prism fold. VCC has been shown to bind glycosylated proteins, and removal of the ß-prism domain leads to a large decrease in lytic activity against rabbit erythrocytes. Despite these clues, the identity of the glycan receptors of VCC and the role of glycan binding in toxin activity remain unknown. To better understand this specificity, we used a combination of structural and functional approaches to characterize the carbohydrate-binding activity of the VCC toxin. We first probed the monosaccharide-binding activity of VCC and demonstrated that the toxin exhibits millimolar affinity for aldohexoses. To understand this specificity, we solved the crystal structure of the VCC ß-prism domain bound to methyl-α-mannose. Next, we utilized a mammalian glycan screen to determine that the ß-prism domain preferentially binds complex N-glycans with a heptasaccharide GlcNAc(4)Man(3) core (NGA2). Fluorescence anisotropy and surface plasmon resonance indicated an approximately 100-nM affinity of the ß-prism domain for the heptasaccharide core. Our results suggest that carbohydrate-binding domains on the VCC toxin facilitate high-affinity targeting of mammalian cell membranes, which may contribute to the ability of VCC to lyse cells at picomolar concentrations.


Assuntos
Oligossacarídeos/química , Perforina/química , Polissacarídeos/metabolismo , Vibrio cholerae/patogenicidade , Animais , Calorimetria , Cristalografia por Raios X , Eritrócitos/microbiologia , Polarização de Fluorescência , Hemólise , Humanos , Mutação/genética , Oligossacarídeos/metabolismo , Perforina/genética , Perforina/metabolismo , Polissacarídeos/química , Estrutura Terciária de Proteína , Coelhos , Ressonância de Plasmônio de Superfície , Vibrio cholerae/metabolismo
20.
J Mol Biol ; 381(4): 1012-24, 2008 Sep 12.
Artigo em Inglês | MEDLINE | ID: mdl-18625238

RESUMO

CHIR-AB1 is a newly identified avian immunoglobulin (Ig) receptor that includes both activating and inhibitory motifs and was therefore classified as a potentially bifunctional receptor. Recently, CHIR-AB1 was shown to bind the Fc region of chicken IgY and to induce calcium mobilization via association with the common gamma-chain, a subunit that transmits signals upon ligation of many different immunoreceptors. Here we describe the 1.8-A-resolution crystal structure of the CHIR-AB1 ectodomain. The receptor ectodomain consists of a single C2-type Ig domain resembling the Ig-like domains found in mammalian Fc receptors such as FcgammaRs and FcalphaRI. Unlike these receptors and other monomeric Ig superfamily members, CHIR-AB1 crystallized as a 2-fold symmetrical homodimer that bears no resemblance to variable or constant region dimers in an antibody. Analytical ultracentrifugation demonstrated that CHIR-AB1 exists as a mixture of monomers and dimers in solution, and equilibrium gel filtration revealed a 2:1 receptor/ligand binding stoichiometry. Measurement of the 1:1 CHIR-AB1/IgY interaction affinity indicates a relatively low affinity complex, but a 2:1 CHIR-AB1/IgY interaction allows an increase in apparent affinity due to avidity effects when the receptor is tethered to a surface. Taken together, these results add to the structural understanding of Fc receptors and their functional mechanisms.


Assuntos
Proteínas Aviárias/química , Galinhas/metabolismo , Receptores Fc/química , Sequência de Aminoácidos , Animais , Proteínas Aviárias/metabolismo , Sítios de Ligação , Técnicas Biossensoriais , Cristalografia por Raios X , Dimerização , Imunoglobulinas/química , Imunoglobulinas/metabolismo , Cinética , Modelos Moleculares , Dados de Sequência Molecular , Ligação Proteica , Estrutura Secundária de Proteína , Receptores Fc/metabolismo
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