Pesquisa | Portal de Pesquisa da BVS Enfermagem

1.

AlphaFold predictions are valuable hypotheses and accelerate but do not replace experimental structure determination.

Terwilliger, Thomas C; Liebschner, Dorothee; Croll, Tristan I; Williams, Christopher J; McCoy, Airlie J; Poon, Billy K; Afonine, Pavel V; Oeffner, Robert D; Richardson, Jane S; Read, Randy J; Adams, Paul D.

Nat Methods ; 21(1): 110-116, 2024 Jan.

Artigo em Inglês | MEDLINE | ID: mdl-38036854

2.

Improved AlphaFold modeling with implicit experimental information.

Terwilliger, Thomas C; Poon, Billy K; Afonine, Pavel V; Schlicksup, Christopher J; Croll, Tristan I; Millán, Claudia; Richardson, Jane S; Read, Randy J; Adams, Paul D.

Nat Methods ; 19(11): 1376-1382, 2022 11.

Artigo em Inglês | MEDLINE | ID: mdl-36266465

3.

Cryo-EM model validation recommendations based on outcomes of the 2019 EMDataResource challenge.

Lawson, Catherine L; Kryshtafovych, Andriy; Adams, Paul D; Afonine, Pavel V; Baker, Matthew L; Barad, Benjamin A; Bond, Paul; Burnley, Tom; Cao, Renzhi; Cheng, Jianlin; Chojnowski, Grzegorz; Cowtan, Kevin; Dill, Ken A; DiMaio, Frank; Farrell, Daniel P; Fraser, James S; Herzik, Mark A; Hoh, Soon Wen; Hou, Jie; Hung, Li-Wei; Igaev, Maxim; Joseph, Agnel P; Kihara, Daisuke; Kumar, Dilip; Mittal, Sumit; Monastyrskyy, Bohdan; Olek, Mateusz; Palmer, Colin M; Patwardhan, Ardan; Perez, Alberto; Pfab, Jonas; Pintilie, Grigore D; Richardson, Jane S; Rosenthal, Peter B; Sarkar, Daipayan; Schäfer, Luisa U; Schmid, Michael F; Schröder, Gunnar F; Shekhar, Mrinal; Si, Dong; Singharoy, Abishek; Terashi, Genki; Terwilliger, Thomas C; Vaiana, Andrea; Wang, Liguo; Wang, Zhe; Wankowicz, Stephanie A; Williams, Christopher J; Winn, Martyn; Wu, Tianqi.

Nat Methods ; 18(2): 156-164, 2021 02.

Artigo em Inglês | MEDLINE | ID: mdl-33542514

4.

OECD harmonised template 201: Structuring and reporting mechanistic information to foster the integration of new approach methodologies for hazard and risk assessment of chemicals.

Carnesecchi, Edoardo; Langezaal, Ingrid; Browne, Patience; Batista-Leite, Sofia; Campia, Ivana; Coecke, Sandra; Dagallier, Bertrand; Deceuninck, Pierre; Dorne, Jean Lou Cm; Tarazona, Jose V; Le Goff, Francois; Leinala, Eeva; Morath, Siegfried; Munn, Sharon; Richardson, Jane; Paini, Alicia; Wittwehr, Clemens.

Regul Toxicol Pharmacol ; 142: 105426, 2023 Aug.

Artigo em Inglês | MEDLINE | ID: mdl-37277057

5.

VectorNet: collaborative mapping of arthropod disease vectors in Europe and surrounding areas since 2010.

Wint, G R William; Balenghien, Thomas; Berriatua, Eduardo; Braks, Marieta; Marsboom, Cedric; Medlock, Jolyon; Schaffner, Francis; Van Bortel, Wim; Alexander, Neil; Alten, Bulent; Czwienczek, Ewelina; Dhollander, Sofie; Ducheyne, Els; Gossner, Celine M; Hansford, Kayleigh; Hendrickx, Guy; Honrubia, Hector; Matheussen, Tom; Mihalca, Andrei Daniel; Petric, Dusan; Richardson, Jane; Sprong, Hein; Versteirt, Veerle; Briet, Olivier.

Euro Surveill ; 28(26)2023 06.

Artigo em Inglês | MEDLINE | ID: mdl-37382886

6.

A Reflection on the Tensions of Acting in Dual Roles of Doctoral Researcher and Practitioner when Evaluating a Lifestyle Intervention for Breast Cancer Patients.

Richardson, Jane; Erol, Rosie; Bueno, Allain Amador.

J Cancer Educ ; 38(1): 383-386, 2023 02.

Artigo em Inglês | MEDLINE | ID: mdl-35606574

7.

Seeing the PDB.

Richardson, Jane S; Richardson, David C; Goodsell, David S.

J Biol Chem ; 296: 100742, 2021.

Artigo em Inglês | MEDLINE | ID: mdl-33957126

8.

Improving SARS-CoV-2 structures: Peer review by early coordinate release.

Croll, Tristan I; Williams, Christopher J; Chen, Vincent B; Richardson, David C; Richardson, Jane S.

Biophys J ; 120(6): 1085-1096, 2021 03 16.

Artigo em Inglês | MEDLINE | ID: mdl-33460600

9.

Assessment of detailed conformations suggests strategies for improving cryoEM models: Helix at lower resolution, ensembles, pre-refinement fixups, and validation at multi-residue length scale.

Richardson, Jane S; Williams, Christopher J; Videau, Lizbeth L; Chen, Vincent B; Richardson, David C.

J Struct Biol ; 204(2): 301-312, 2018 11.

Artigo em Inglês | MEDLINE | ID: mdl-30107233

10.

Constructing atomic structural models into cryo-EM densities using molecular dynamics - Pros and cons.

Wang, Yuhang; Shekhar, Mrinal; Thifault, Darren; Williams, Christopher J; McGreevy, Ryan; Richardson, Jane; Singharoy, Abhishek; Tajkhorshid, Emad.

J Struct Biol ; 204(2): 319-328, 2018 11.

Artigo em Inglês | MEDLINE | ID: mdl-30092279

11.

A new way to see RNAs.

Richardson, Jane S.

Nat Methods ; 17(7): 663-664, 2020 07.

Artigo em Inglês | MEDLINE | ID: mdl-32616927

12.

New insights into Hoogsteen base pairs in DNA duplexes from a structure-based survey.

Zhou, Huiqing; Hintze, Bradley J; Kimsey, Isaac J; Sathyamoorthy, Bharathwaj; Yang, Shan; Richardson, Jane S; Al-Hashimi, Hashim M.

Nucleic Acids Res ; 43(7): 3420-33, 2015 Apr 20.

Artigo em Inglês | MEDLINE | ID: mdl-25813047

13.

Molprobity's ultimate rotamer-library distributions for model validation.

Hintze, Bradley J; Lewis, Steven M; Richardson, Jane S; Richardson, David C.

Proteins ; 84(9): 1177-89, 2016 09.

Artigo em Inglês | MEDLINE | ID: mdl-27018641

14.

New tools provide a second look at HDV ribozyme structure, dynamics and cleavage.

Kapral, Gary J; Jain, Swati; Noeske, Jonas; Doudna, Jennifer A; Richardson, David C; Richardson, Jane S.

Nucleic Acids Res ; 42(20): 12833-46, 2014 Nov 10.

Artigo em Inglês | MEDLINE | ID: mdl-25326328

15.

The acceptability to patients of PhysioDirect telephone assessment and advice services; a qualitative interview study.

Pearson, Jennifer; Richardson, Jane; Calnan, Michael; Salisbury, Chris; Foster, Nadine E.

BMC Health Serv Res ; 16: 104, 2016 Mar 28.

Artigo em Inglês | MEDLINE | ID: mdl-27020840

16.

A joint effort over a period of time: factors affecting use of urate-lowering therapy for long-term treatment of gout.

Richardson, Jane C; Liddle, Jennifer; Mallen, Christian D; Roddy, Edward; Hider, Samantha; Prinjha, Suman; Ziebland, Sue.

BMC Musculoskelet Disord ; 17: 249, 2016 06 06.

Artigo em Inglês | MEDLINE | ID: mdl-27267878

17.

"Why me? I don't fit the mould I am a freak of nature": a qualitative study of women's experience of gout.

Richardson, Jane C; Liddle, Jennifer; Mallen, Christian D; Roddy, Edward; Prinjha, Suman; Ziebland, Sue; Hider, Samantha.

BMC Womens Health ; 15: 122, 2015 Dec 28.

Artigo em Inglês | MEDLINE | ID: mdl-26710971

18.

Biophysical highlights from 54 years of macromolecular crystallography.

Richardson, Jane S; Richardson, David C.

Biophys J ; 106(3): 510-25, 2014 Feb 04.

Artigo em Inglês | MEDLINE | ID: mdl-24507592

19.

Automated identification of elemental ions in macromolecular crystal structures.

Echols, Nathaniel; Morshed, Nader; Afonine, Pavel V; McCoy, Airlie J; Miller, Mitchell D; Read, Randy J; Richardson, Jane S; Terwilliger, Thomas C; Adams, Paul D.

Acta Crystallogr D Biol Crystallogr ; 70(Pt 4): 1104-14, 2014 Apr.

Artigo em Inglês | MEDLINE | ID: mdl-24699654

20.

Extending the authority for sickness certification beyond the medical profession: the importance of 'boundary work'.

Welsh, Victoria K; Sanders, Tom; Richardson, Jane C; Wynne-Jones, Gwenllian; Jinks, Clare; Mallen, Christian D.

BMC Fam Pract ; 15: 100, 2014 May 17.

Artigo em Inglês | MEDLINE | ID: mdl-24884678

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