Your browser doesn't support javascript.
loading
Mostrar: 20 | 50 | 100
Resultados 1 - 20 de 23
Filtrar
1.
Proc Natl Acad Sci U S A ; 112(44): 13669-74, 2015 Nov 03.
Artigo em Inglês | MEDLINE | ID: mdl-26474830

RESUMO

Cyclodextrins are cyclic oligosaccharides widely used in the pharmaceutical industry to improve drug delivery and to increase the solubility of hydrophobic compounds. Anabaenolysins are lipopeptides produced by cyanobacteria with potent lytic activity in cholesterol-containing membranes. Here, we identified the 23- to 24-kb gene clusters responsible for the production of the lipopeptide anabaenolysin. The hybrid nonribosomal peptide synthetase and polyketide synthase biosynthetic gene cluster is encoded in the genomes of three anabaenolysin-producing strains of Anabaena. We detected previously unidentified strains producing known anabaenolysins A and B and discovered the production of new variants of anabaenolysins C and D. Bioassays demonstrated that anabaenolysins have weak antifungal activity against Candida albicans. Surprisingly, addition of the hydrophilic fraction of the whole-cell extracts increased the antifungal activity of the hydrophobic anabaenolysins. The fraction contained compounds identified by NMR as α-, ß-, and γ-cyclodextrins, which undergo acetylation. Cyclodextrins have been used for decades to improve the solubility and bioavailability of many drugs including antifungal compounds. This study shows a natural example of cyclodextrins improving the solubility and efficacy of an antifungal compound in an ancient lineage of photosynthetic bacteria.


Assuntos
Antifúngicos/farmacologia , Proteínas de Bactérias/biossíntese , Cianobactérias/metabolismo , Ciclodextrinas/biossíntese , Cianobactérias/genética , Genes Bacterianos , Dados de Sequência Molecular
2.
Proc Natl Acad Sci U S A ; 111(25): 9259-64, 2014 Jun 24.
Artigo em Inglês | MEDLINE | ID: mdl-24927540

RESUMO

Nonribosomal peptides and polyketides are a diverse group of natural products with complex chemical structures and enormous pharmaceutical potential. They are synthesized on modular nonribosomal peptide synthetase (NRPS) and polyketide synthase (PKS) enzyme complexes by a conserved thiotemplate mechanism. Here, we report the widespread occurrence of NRPS and PKS genetic machinery across the three domains of life with the discovery of 3,339 gene clusters from 991 organisms, by examining a total of 2,699 genomes. These gene clusters display extraordinarily diverse organizations, and a total of 1,147 hybrid NRPS/PKS clusters were found. Surprisingly, 10% of bacterial gene clusters lacked modular organization, and instead catalytic domains were mostly encoded as separate proteins. The finding of common occurrence of nonmodular NRPS differs substantially from the current classification. Sequence analysis indicates that the evolution of NRPS machineries was driven by a combination of common descent and horizontal gene transfer. We identified related siderophore NRPS gene clusters that encoded modular and nonmodular NRPS enzymes organized in a gradient. A higher frequency of the NRPS and PKS gene clusters was detected from bacteria compared with archaea or eukarya. They commonly occurred in the phyla of Proteobacteria, Actinobacteria, Firmicutes, and Cyanobacteria in bacteria and the phylum of Ascomycota in fungi. The majority of these NRPS and PKS gene clusters have unknown end products highlighting the power of genome mining in identifying novel genetic machinery for the biosynthesis of secondary metabolites.


Assuntos
Bactérias/genética , Evolução Molecular , Genoma Bacteriano , Policetídeo Sintases/genética , Policetídeos , Sideróforos/genética , Família Multigênica/fisiologia , Estrutura Terciária de Proteína , Análise de Sequência de Proteína/métodos
3.
Proc Natl Acad Sci U S A ; 111(18): E1909-17, 2014 May 06.
Artigo em Inglês | MEDLINE | ID: mdl-24742428

RESUMO

Cyanobacteria produce a wide variety of cyclic peptides, including the widespread hepatotoxins microcystins and nodularins. Another class of peptides, cyclic glycosylated lipopeptides called hassallidins, show antifungal activity. Previously, two hassallidins (A and B) were reported from an epilithic cyanobacterium Hassallia sp. and found to be active against opportunistic human pathogenic fungi. Bioinformatic analysis of the Anabaena sp. 90 genome identified a 59-kb cryptic inactive nonribosomal peptide synthetase gene cluster proposed to be responsible for hassallidin biosynthesis. Here we describe the hassallidin biosynthetic pathway from Anabaena sp. SYKE748A, as well as the large chemical variation and common occurrence of hassallidins in filamentous cyanobacteria. Analysis demonstrated that 20 strains of the genus Anabaena carry hassallidin synthetase genes and produce a multitude of hassallidin variants that exhibit activity against Candida albicans. The compounds discovered here were distinct from previously reported hassallidins A and B. The IC50 of hassallidin D was 0.29-1.0 µM against Candida strains. A large variation in amino acids, sugars, their degree of acetylation, and fatty acid side chain length was detected. In addition, hassallidins were detected in other cyanobacteria including Aphanizomenon, Cylindrospermopsis raciborskii, Nostoc, and Tolypothrix. These compounds may protect some of the most important bloom-forming and globally distributed cyanobacteria against attacks by parasitic fungi.


Assuntos
Anabaena/metabolismo , Antifúngicos/metabolismo , Cianobactérias/metabolismo , Glicolipídeos/metabolismo , Glicopeptídeos/metabolismo , Lipopeptídeos/metabolismo , Peptídeos Cíclicos/metabolismo , Anabaena/genética , Antifúngicos/química , Antifúngicos/farmacologia , Candida albicans/efeitos dos fármacos , Cianobactérias/genética , Genes Bacterianos , Glicolipídeos/química , Glicolipídeos/genética , Glicopeptídeos/química , Glicopeptídeos/genética , Humanos , Lipopeptídeos/química , Lipopeptídeos/genética , Redes e Vias Metabólicas , Dados de Sequência Molecular , Estrutura Molecular , Família Multigênica , Ressonância Magnética Nuclear Biomolecular , Peptídeos Cíclicos/química , Peptídeos Cíclicos/genética , Filogenia
4.
BMC Evol Biol ; 13: 86, 2013 Apr 19.
Artigo em Inglês | MEDLINE | ID: mdl-23601305

RESUMO

BACKGROUND: Many important toxins and antibiotics are produced by non-ribosomal biosynthetic pathways. Microcystins are a chemically diverse family of potent peptide toxins and the end-products of a hybrid NRPS and PKS secondary metabolic pathway. They are produced by a variety of cyanobacteria and are responsible for the poisoning of humans as well as the deaths of wild and domestic animals around the world. The chemical diversity of the microcystin family is attributed to a number of genetic events that have resulted in the diversification of the pathway for microcystin assembly. RESULTS: Here, we show that independent evolutionary events affecting the substrate specificity of the microcystin biosynthetic pathway have resulted in convergence on a rare [D-Leu(1)] microcystin-LR chemical variant. We detected this rare microcystin variant from strains of the distantly related genera Microcystis, Nostoc, and Phormidium. Phylogenetic analysis performed using sequences of the catalytic domains within the mcy gene cluster demonstrated a clear recombination pattern in the adenylation domain phylogenetic tree. We found evidence for conversion of the gene encoding the McyA(2) adenylation domain in strains of the genera Nostoc and Phormidium. However, point mutations affecting the substrate-binding sequence motifs of the McyA(2) adenylation domain were associated with the change in substrate specificity in two strains of Microcystis. In addition to the main [D-Leu(1)] microcystin-LR variant, these two strains produced a new microcystin that was identified as [Met(1)] microcystin-LR. CONCLUSIONS: Phylogenetic analysis demonstrated that both point mutations and gene conversion result in functional mcy gene clusters that produce the same rare [D-Leu(1)] variant of microcystin in strains of the genera Microcystis, Nostoc, and Phormidium. Engineering pathways to produce recombinant non-ribosomal peptides could provide new natural products or increase the activity of known compounds. Our results suggest that the replacement of entire adenylation domains could be a more successful strategy to obtain higher specificity in the modification of the non-ribosomal peptides than point mutations.


Assuntos
Evolução Biológica , Cianobactérias/classificação , Cianobactérias/genética , Microcistinas/genética , Biossíntese Peptídica , Monofosfato de Adenosina/metabolismo , Cianobactérias/metabolismo , Microcistinas/química , Filogenia , Especificidade por Substrato
5.
BMC Genomics ; 13: 613, 2012 Nov 13.
Artigo em Inglês | MEDLINE | ID: mdl-23148582

RESUMO

BACKGROUND: Cyanobacteria can form massive toxic blooms in fresh and brackish bodies of water and are frequently responsible for the poisoning of animals and pose a health risk for humans. Anabaena is a genus of filamentous diazotrophic cyanobacteria commonly implicated as a toxin producer in blooms in aquatic ecosystems throughout the world. The biology of bloom-forming cyanobacteria is poorly understood at the genome level. RESULTS: Here, we report the complete sequence and comprehensive annotation of the bloom-forming Anabaena sp. strain 90 genome. It comprises two circular chromosomes and three plasmids with a total size of 5.3 Mb, encoding a total of 4,738 genes. The genome is replete with mobile genetic elements. Detailed manual annotation demonstrated that almost 5% of the gene repertoire consists of pseudogenes. A further 5% of the genome is dedicated to the synthesis of small peptides that are the products of both ribosomal and nonribosomal biosynthetic pathways. Inactivation of the hassallidin (an antifungal cyclic peptide) biosynthetic gene cluster through a deletion event and a natural mutation of the buoyancy-permitting gvpG gas vesicle gene were documented. The genome contains a large number of genes encoding restriction-modification systems. Two novel excision elements were found in the nifH gene that is required for nitrogen fixation. CONCLUSIONS: Genome analysis demonstrated that this strain invests heavily in the production of bioactive compounds and restriction-modification systems. This well-annotated genome provides a platform for future studies on the ecology and biology of these important bloom-forming cyanobacteria.


Assuntos
Anabaena/genética , Genoma Bacteriano/genética , Anabaena/virologia , Sequência de Bases , Vias Biossintéticas/genética , Mapeamento Cromossômico , Elementos de DNA Transponíveis/genética , Regulação da Expressão Gênica/genética , Anotação de Sequência Molecular , Dados de Sequência Molecular , Prófagos/genética , Pseudogenes/genética , Análise de Sequência de DNA , Transdução de Sinais/genética
7.
Appl Environ Microbiol ; 77(22): 8034-40, 2011 Nov.
Artigo em Inglês | MEDLINE | ID: mdl-21948844

RESUMO

Cyanobacteria are a rich source of natural products with interesting pharmaceutical properties. Here, we report the identification, sequencing, annotation, and biochemical analysis of the nostophycin (npn) biosynthetic gene cluster. The npn gene cluster spans 45.1 kb and consists of three open reading frames encoding a polyketide synthase, a mixed polyketide nonribosomal peptide synthetase, and a nonribosomal peptide synthetase. The genetic architecture and catalytic domain organization of the proteins are colinear in arrangement, with the putative order of the biosynthetic assembly of the cyclic heptapeptide. NpnB contains an embedded monooxygenase domain linking nonribosomal peptide synthetase (NRPS) and polyketide synthase (PKS) catalytic domains and predicted here to hydroxylate the nostophycin during assembly. Expression of the adenylation domains and subsequent substrate specificity assays support the involvement of this cluster in nostophycin biosynthesis. Biochemical analyses suggest that the loading substrate of NpnA is likely to be a phenylpropanoic acid necessitating deletion of a carbon atom to explain the biosynthesis of nostophycin. Biosyntheses of nostophycin and microcystin resemble each other, but the phylogenetic analyses suggest that they are distantly related to one another.


Assuntos
Toxinas Bacterianas/biossíntese , Nostoc/enzimologia , Nostoc/metabolismo , Peptídeo Sintases/metabolismo , Peptídeos Cíclicos/biossíntese , Policetídeo Sintases/metabolismo , Vias Biossintéticas/genética , Análise por Conglomerados , DNA Bacteriano/química , DNA Bacteriano/genética , Fusão Gênica , Genes Bacterianos , Dados de Sequência Molecular , Família Multigênica , Peptídeo Sintases/genética , Filogenia , Policetídeo Sintases/genética , Análise de Sequência de DNA , Homologia de Sequência de Aminoácidos
8.
Appl Environ Microbiol ; 77(20): 7271-8, 2011 Oct.
Artigo em Inglês | MEDLINE | ID: mdl-21873484

RESUMO

Cyanobacterial mass occurrences are common in fresh and brackish waters. They pose a threat to water users due to toxins frequently produced by the cyanobacterial species present. Anatoxin-a and homoanatoxin-a are neurotoxins synthesized by various cyanobacteria, e.g., Anabaena, Oscillatoria, and Aphanizomenon. The biosynthesis of these toxins and the genes involved in anatoxin production were recently described for Oscillatoria sp. strain PCC 6506 (A. Méjean et al., J. Am. Chem. Soc. 131:7512-7513, 2009). In this study, we identified the anatoxin synthetase gene cluster (anaA to anaG and orf1; 29 kb) in Anabaena sp. strain 37. The gene (81.6% to 89.2%) and amino acid (78.8% to 86.9%) sequences were highly similar to those of Oscillatoria sp. PCC 6506, while the organization of the genes differed. Molecular detection methods for potential anatoxin-a and homoanatoxin-a producers of the genera Anabaena, Aphanizomenon, and Oscillatoria were developed by designing primers to recognize the anaC gene. Anabaena and Oscillatoria anaC genes were specifically identified in several cyanobacterial strains by PCR. Restriction fragment length polymorphism (RFLP) analysis of the anaC amplicons enabled simultaneous identification of three producer genera: Anabaena, Oscillatoria, and Aphanizomenon. The molecular methods developed in this study revealed the presence of both Anabaena and Oscillatoria as potential anatoxin producers in Finnish fresh waters and the Baltic Sea; they could be applied for surveys of these neurotoxin producers in other aquatic environments.


Assuntos
Anabaena/genética , Anabaena/metabolismo , Vias Biossintéticas/genética , Ligases/genética , Família Multigênica , Tropanos/metabolismo , Aphanizomenon/genética , Proteínas de Bactérias/genética , Toxinas de Cianobactérias , Primers do DNA/genética , DNA Bacteriano/química , DNA Bacteriano/genética , Ordem dos Genes , Dados de Sequência Molecular , Oscillatoria/genética , Reação em Cadeia da Polimerase , Polimorfismo de Fragmento de Restrição , Análise de Sequência de DNA , Homologia de Sequência do Ácido Nucleico
9.
Mol Microbiol ; 73(5): 924-37, 2009 Sep.
Artigo em Inglês | MEDLINE | ID: mdl-19691450

RESUMO

Nodularia spumigena is a filamentous nitrogen-fixing cyanobacterium that forms toxic blooms in brackish water bodies worldwide. Spumigins are serine protease inhibitors reported from a single strain of N. spumigena isolated from the Baltic Sea. These linear tetrapeptides contain non-proteinogenic amino acids including a C-terminal alcohol derivative of arginine. However, very little is known about these compounds despite the ecological importance of N. spumigena. We show that spumigins are assembled by two non-ribosomal peptide synthetases encoded in a 21 kb biosynthetic gene cluster. The compact non-ribosomal peptide synthetase features a reductive loading and release mechanism. Our analyses demonstrate that the bulk of spumigins produced by N. spumigena are released as peptide aldehydes in contrast to earlier findings. The main spumigin E variant contains an argininal residue and is a potent trypsin inhibitor. Spumigins were present in all of the N. spumigena strains isolated from the Baltic Sea and comprised up to 1% of the dry weight of the cyanobacterium. Our results demonstrate that bloom-forming N. spumigena strains produce a cocktail of enzyme inhibitors, which may explain in part the ecological success of this cyanobacterium in brackish water bodies worldwide.


Assuntos
Proteínas de Bactérias/biossíntese , Nodularia/metabolismo , Oligopeptídeos/biossíntese , Inibidores de Serina Proteinase/biossíntese , Proteínas de Bactérias/química , Cromatografia Líquida , Ordem dos Genes , Genes Bacterianos , Espectrometria de Massas , Estrutura Molecular , Família Multigênica , Nodularia/isolamento & purificação , Oligopeptídeos/química , Biossíntese de Peptídeos Independentes de Ácido Nucleico , Peptídeo Sintases/metabolismo , Filogenia , Água do Mar/microbiologia , Homologia de Sequência de Aminoácidos
10.
Appl Environ Microbiol ; 76(3): 701-9, 2010 Feb.
Artigo em Inglês | MEDLINE | ID: mdl-20008171

RESUMO

Cyanobactins are small, cyclic peptides recently found in cyanobacteria. They are formed through proteolytic cleavage and posttranslational modification of short precursor proteins and exhibit antitumor, cytotoxic, or multi-drug-reversing activities. Using genome project data, bioinformatics, stable isotope labeling, and mass spectrometry, we discovered novel cyclic peptides, anacyclamides, in 27 Anabaena strains. The lengths of the anacylamides varied greatly, from 7 to 20 amino acids. Pronounced sequence variation was also detected, and only one amino acid, proline, was present in all anacyclamides. The anacyclamides identified included unmodified proteinogenic or prenylated amino acids. We identified an 11-kb gene cluster in the genome of Anabaena sp. 90, and heterologous expression in Escherichia coli confirmed that this cluster was responsible for anacyclamide production. The discovery of anacyclamides greatly increases the structural diversity of cyanobactins.


Assuntos
Anabaena/metabolismo , Peptídeos Cíclicos/química , Sequência de Aminoácidos , Aminoácidos/genética , Aminoácidos/metabolismo , Anabaena/química , Anabaena/genética , Proteínas de Bactérias/genética , Proteínas de Bactérias/metabolismo , Clonagem Molecular , Elementos de DNA Transponíveis , DNA Bacteriano/genética , DNA Bacteriano/metabolismo , Escherichia coli/genética , Escherichia coli/metabolismo , Evolução Molecular , Genes Bacterianos , Engenharia Genética , Espectrometria de Massas , Proteínas de Membrana/genética , Proteínas de Membrana/metabolismo , Dados de Sequência Molecular , Família Multigênica , Peptídeos Cíclicos/genética , Peptídeos Cíclicos/metabolismo , Filogenia , RNA Ribossômico 16S/genética , RNA Ribossômico 16S/metabolismo , Análise de Sequência de DNA , Homologia de Sequência de Aminoácidos
11.
BMC Evol Biol ; 8: 256, 2008 Sep 22.
Artigo em Inglês | MEDLINE | ID: mdl-18808704

RESUMO

BACKGROUND: Cyanobacteria produce a wealth of secondary metabolites, including the group of small cyclic heptapeptide hepatotoxins that constitutes the microcystin family. The enzyme complex that directs the biosynthesis of microcystin is encoded in a single large gene cluster (mcy). mcy genes have a widespread distribution among cyanobacteria and are likely to have an ancient origin. The notable diversity within some of the Mcy modules is generated through various recombination events including horizontal gene transfer. RESULTS: A comparative analysis of the adenylation domains from the first module of McyB (McyB1) and McyC in the microcystin synthetase complex was performed on a large number of microcystin-producing strains from the Anabaena, Microcystis and Planktothrix genera. We found no decisive evidence for recombination between strains from different genera. However, we detected frequent recombination events in the mcyB and mcyC genes between strains within the same genus. Frequent interdomain recombination events were also observed between mcyB and mcyC sequences in Anabaena and Microcystis. Recombination and mutation rate ratios suggest that the diversification of mcyB and mcyC genes is driven by recombination events as well as point mutations in all three genera. Sequence analysis suggests that generally the adenylation domains of the first domain of McyB and McyC are under purifying selection. However, we found clear evidence for positive selection acting on a number of amino acid residues within these adenylation domains. These include residues important for active site selectivity of the adenylation domain, strongly suggesting selection for novel microcystin variants. CONCLUSION: We provide the first clear evidence for positive selection acting on amino acid residues involved directly in the recognition and activation of amino acids incorporated into microcystin, indicating that the microcystin complement of a given strain may influence the ability of a particular strain to interact with its environment.


Assuntos
Proteínas de Bactérias/genética , Cianobactérias/enzimologia , Cianobactérias/genética , Peptídeo Sintases/genética , Seleção Genética , Sequência de Aminoácidos , DNA Bacteriano/genética , Evolução Molecular , Genes Bacterianos , Variação Genética , Dados de Sequência Molecular , Família Multigênica , Filogenia , Domínios e Motivos de Interação entre Proteínas , Isoformas de Proteínas , Recombinação Genética , Alinhamento de Sequência , Análise de Sequência de Proteína , Especificidade por Substrato
12.
Toxicon ; 141: 43-50, 2018 Jan.
Artigo em Inglês | MEDLINE | ID: mdl-29154789

RESUMO

Microcystins (MCs) are serine/threonine phosphatase inhibitors synthesized by several members of the phylum Cyanobacteria. Mining the draft genome sequence of the nostocalean MC-producing Fischerella sp. strain CENA161 led to the identification of three contigs containing mcy genes. Subsequent PCR and Sanger sequencing allowed the assembling of its complete biosynthetic mcy gene cluster with 55,016 bases in length. The cluster encoding ten genes (mcyA-J) with a central bidirectional promoter was organized in a similar manner as found in other genera of nostocalean cyanobacteria. However, the nucleotide sequence of the mcy gene cluster of Fischerella sp. CENA161 showed significant differences from all the other MC-producing cyanobacterial genera, sharing only 85.2 to 74.1% identities. Potential MC variants produced by Fischerella sp. CENA161 were predicted by the analysis of the adenylation domain binding pockets and further investigated by LC-MS/MS analysis. To our knowledge, this study presents the first complete mcy cluster characterization from a strain of the genus Fischerella, providing new insight into the distribution and evolution of MCs in the phylum Cyanobacteria.


Assuntos
Cianobactérias/genética , Cianobactérias/metabolismo , Microcistinas/biossíntese , Cromatografia Líquida , DNA Bacteriano , Genes Bacterianos , Microcistinas/genética , Família Multigênica , Filogenia , Análise de Sequência de DNA , Espectrometria de Massas em Tandem
13.
BMC Evol Biol ; 7: 183, 2007 Oct 01.
Artigo em Inglês | MEDLINE | ID: mdl-17908306

RESUMO

BACKGROUND: Microcystins are small cyclic heptapeptide toxins produced by a range of distantly related cyanobacteria. Microcystins are synthesized on large NRPS-PKS enzyme complexes. Many structural variants of microcystins are produced simultaneously. A recombination event between the first module of mcyB (mcyB1) and mcyC in the microcystin synthetase gene cluster is linked to the simultaneous production of microcystin variants in strains of the genus Microcystis. RESULTS: Here we undertook a phylogenetic study to investigate the order and timing of recombination between the mcyB1 and mcyC genes in a diverse selection of microcystin producing cyanobacteria. Our results provide support for complex evolutionary processes taking place at the mcyB1 and mcyC adenylation domains which recognize and activate the amino acids found at X and Z positions. We find evidence for recent recombination between mcyB1 and mcyC in strains of the genera Anabaena, Microcystis, and Hapalosiphon. We also find clear evidence for independent adenylation domain conversion of mcyB1 by unrelated peptide synthetase modules in strains of the genera Nostoc and Microcystis. The recombination events replace only the adenylation domain in each case and the condensation domains of mcyB1 and mcyC are not transferred together with the adenylation domain. Our findings demonstrate that the mcyB1 and mcyC adenylation domains are recombination hotspots in the microcystin synthetase gene cluster. CONCLUSION: Recombination is thought to be one of the main mechanisms driving the diversification of NRPSs. However, there is very little information on how recombination takes place in nature. This study demonstrates that functional peptide synthetases are created in nature through transfer of adenylation domains without the concomitant transfer of condensation domains.


Assuntos
Proteínas de Bactérias/genética , Genes Bacterianos , Microcistinas/genética , Microcystis/genética , Família Multigênica , Peptídeo Sintases/genética , DNA Bacteriano/genética , Toxinas Marinhas , Microcystis/enzimologia , Filogenia , Reação em Cadeia da Polimerase , Domínios e Motivos de Interação entre Proteínas , Recombinação Genética , Análise de Sequência de DNA , Especificidade por Substrato
14.
ACS Chem Biol ; 10(3): 725-33, 2015 Mar 20.
Artigo em Inglês | MEDLINE | ID: mdl-25419633

RESUMO

Nodularia spumigena is a filamentous cyanobacterium that forms toxic blooms in brackish waters around the world through the production of the pentapeptide toxin nodularin. This cyanobacterium also produces large amounts of protease inhibitors belonging to the aeruginosin and spumigin families. Here we report the discovery of previously unknown protease inhibitors, pseudoaeruginosins NS1 (1) and NS2 (2), from 33 strains of N. spumigena isolated from the Baltic Sea. Pseudoaeruginosin NS1 (1) and NS2 (2) contain hexanoic acid, tyrosine, 4-methylproline, and argininal/argininol. The chemical structure of the two pseudoaeruginosins was verified by thorough comparison of the liquid chromatography-mass spectrometry (LC-MS) analyses of the extracts from the N. spumigena strains with synthetic peptides. The structures of the synthetic pseudoaeruginosins were confirmed using nuclear magnetic resonance spectroscopy. Surprisingly, the structure of pseudoaeruginosin NS1 (1) and NS2 (2) combines features of both aeruginosins and spumigins, suggesting that they have been produced through the joint action of both the spumigin and aeruginosin biosynthesis pathways. We screened with polymerase chain reaction and LC-MS 68 N. spumigena strains from the Baltic Sea and Australia. Pseudoaeruginosins were present in half of the Baltic Sea strains but were not found from the Australian strains. The production of pseudoaeruginosin seems to be coupled to the production of aeruginosins and 4-methylproline-containing spumigins. Pseudoaeruginosin NS1 was found to be as potent trypsin inhibitor as the most potent aeruginosins and spumigins with an IC50 of 0.19 ± 0.04 µM. This finding suggests that cooperation between the spumigin and aeruginosin biosynthetic pathways results in hybrid pseudoaeruginosin peptides.


Assuntos
Proteínas de Bactérias/química , Nodularia/química , Oligopeptídeos/química , Peptídeos Cíclicos/química , Inibidores de Proteases/química , Austrália , Proteínas de Bactérias/síntese química , Proteínas de Bactérias/isolamento & purificação , Países Bálticos , Cromatografia Líquida , Quimotripsina/antagonistas & inibidores , Quimotripsina/química , Cinética , Nodularia/metabolismo , Oceanos e Mares , Oligopeptídeos/síntese química , Oligopeptídeos/isolamento & purificação , Peptídeos Cíclicos/isolamento & purificação , Inibidores de Proteases/síntese química , Inibidores de Proteases/isolamento & purificação , Espectrometria de Massas por Ionização e Dessorção a Laser Assistida por Matriz , Tripsina/química
15.
Chem Biol ; 20(7): 861-9, 2013 Jul 25.
Artigo em Inglês | MEDLINE | ID: mdl-23890004

RESUMO

Microcystins are a family of cyclic peptide toxins produced by cyanobacteria. They are responsible for the toxicosis and death of wild and domestic animals throughout the world. They display extensive variation in amino acid composition and functional group chemistry. O-acetylated microcystins are frequently produced by free-living and symbiotic strains of the genus Nostoc. Here, we show that the production of acetylated microcystins is catalyzed by an acetyl-coenzyme A-dependent O-acetyltransferase (McyL) encoded in the 57 kb microcystin synthetase gene cluster of Nostoc sp. 152. Phylogenetic analysis demonstrates that McyL belongs to a family of enzymes that inactivate antibiotics through O-acetylation. The McyL enzyme has a relaxed substrate specificity, allowing the preparation of semisynthetic microcystins. This study sheds light on the evolutionary origins and genetic diversity of an important class of enzymes involved in antibiotic resistance.


Assuntos
Toxinas Bacterianas/metabolismo , Microcistinas/metabolismo , Nostoc/genética , Nostoc/metabolismo , Oxigênio/metabolismo , Acetilação , Acetiltransferases/metabolismo , Toxinas Bacterianas/biossíntese , Biocatálise , Coenzima A/metabolismo , Microcistinas/biossíntese , Dados de Sequência Molecular , Família Multigênica
16.
PLoS One ; 8(9): e73618, 2013.
Artigo em Inglês | MEDLINE | ID: mdl-24040002

RESUMO

Nodularia spumigena is a filamentous diazotrophic cyanobacterium that forms blooms in brackish water bodies. This cyanobacterium produces linear and cyclic peptide protease inhibitors which are thought to be part of a chemical defense against grazers. Here we show that N. spumigena produces structurally novel members of the aeruginosin family of serine protease inhibitors. Extensive chemical analyses including NMR demonstrated that the aeruginosins are comprised of an N-terminal short fatty acid chain, L-Tyr, L-Choi and L-argininal and in some cases pentose sugar. The genome of N. spumigena CCY9414 contains a compact 18-kb aeruginosin gene cluster encoding a peptide synthetase with a reductive release mechanism which offloads the aeruginosins as reactive peptide aldehydes. Analysis of the aeruginosin and spumigin gene clusters revealed two different strategies for the incorporation of N-terminal protecting carboxylic acids. These results demonstrate that strains of N. spumigena produce aeruginosins and spumigins, two families of structurally similar linear peptide aldehydes using separate peptide synthetases. The aeruginosins were chemically diverse and we found 11 structural variants in 16 strains from the Baltic Sea and Australia. Our findings broaden the known structural diversity of the aeruginosin peptide family to include peptides with rare N-terminal short chain (C2-C10) fatty acid moieties.


Assuntos
Proteínas de Bactérias/genética , Família Multigênica , Nodularia/genética , Inibidores de Serina Proteinase/genética , Sequência de Aminoácidos , Austrália , Proteínas de Bactérias/química , Proteínas de Bactérias/classificação , Países Bálticos , Cromatografia Gasosa-Espectrometria de Massas , Genoma Bacteriano/genética , Espectroscopia de Ressonância Magnética , Estrutura Molecular , Nodularia/metabolismo , Oligopeptídeos/química , Oligopeptídeos/genética , Peptídeo Sintases/química , Peptídeo Sintases/genética , Filogenia , Água do Mar/microbiologia , Inibidores de Serina Proteinase/química , Inibidores de Serina Proteinase/classificação
17.
Chem Biol ; 17(3): 265-73, 2010 Mar 26.
Artigo em Inglês | MEDLINE | ID: mdl-20338518

RESUMO

Anabaenopeptins are a diverse family of cyclic hexapeptide protease inhibitors produced by cyanobacteria that contain a conserved ureido bond and D-Lys moiety. Here we demonstrate that anabaenopeptins are assembled on a nonribosomal peptide synthetase enzyme complex encoded by a 32 kb apt gene cluster in the cyanobacterium Anabaena sp. strain 90. Surprisingly, the gene cluster encoded two alternative starter modules organized in separate bimodular proteins. The starter modules display high substrate specificity for L-Arg/L-Lys and L-Tyr, respectively, and allow the specific biosynthesis of different anabaenopeptin variants. The two starter modules were found also in other Anabaena strains. However, just a single module was present in the anabaenopeptin gene clusters of Nostoc and Nodularia, respectively. The organization of the apt gene cluster in Anabaena represents an exception to the established colinearity rule of linear non-ribosomal peptide synthetases.


Assuntos
Anabaena/metabolismo , Proteínas de Bactérias/biossíntese , Biossíntese de Peptídeos Independentes de Ácido Nucleico , Peptídeo Sintases/metabolismo , Peptídeos Cíclicos/biossíntese , Motivos de Aminoácidos/genética , Anabaena/enzimologia , Anabaena/genética , Proteínas de Bactérias/genética , Sequência de Bases , DNA Bacteriano/química , DNA Bacteriano/genética , Espectrometria de Massas , Dados de Sequência Molecular , Família Multigênica , Fases de Leitura Aberta , Peptídeo Sintases/genética , Peptídeos Cíclicos/genética , Reação em Cadeia da Polimerase
18.
Microbiology (Reading) ; 154(Pt 4): 1007-1014, 2008 Apr.
Artigo em Inglês | MEDLINE | ID: mdl-18375794

RESUMO

Microcystins form a large family of small cyclic heptapeptides harbouring extensive modifications in amino acid residue composition and functional group chemistry. These peptide hepatotoxins contain a range of non-proteinogenic amino acids and unusual peptide bonds, and are typically N-methylated. They are synthesized on large enzyme complexes consisting of non-ribosomal peptide synthetases and polyketide synthases in a variety of distantly related cyanobacterial genera. Here we report a 1236 bp in-frame deletion mutation in the mcyA gene of the microcystin biosynthetic pathway in nine strains of the genus Anabaena. The deletion removed almost the entire N-methyltransferase (NMT) domain. Strains of Anabaena carrying the in-frame deletion mutation incorporated mainly dehydroalanine (Dha) into the microcystins they produce while strains with full-length mcyA genes incorporated mainly N-methyldehydroalanine (Mdha). Interestingly, the strains of Anabaena lacking the NMT domain also incorporated elevated amounts of L-Ser, the precursor of Mdha and Dha, into the microcystin they produced relative to strains carrying functional NMT domains. We provide evidence for the in-frame deletion of the NMT domain without the co-conversion of the flanking adenylation domain. Our results demonstrate a further example of the strategies employed by cyanobacteria in the biosynthesis of microcystin variants.


Assuntos
Anabaena/genética , Anabaena/metabolismo , Proteínas de Bactérias/genética , Microcistinas/biossíntese , Peptídeo Sintases/genética , Deleção de Sequência , Alanina/análogos & derivados , Alanina/metabolismo , Anabaena/isolamento & purificação , Proteínas de Bactérias/química , DNA Bacteriano/química , DNA Bacteriano/genética , Dados de Sequência Molecular , Estrutura Molecular , Peptídeo Sintases/química , Filogenia , Reação em Cadeia da Polimerase , Estrutura Terciária de Proteína , Análise de Sequência de DNA , Homologia de Sequência , Serina/metabolismo , Microbiologia da Água
19.
Appl Environ Microbiol ; 69(12): 7289-97, 2003 Dec.
Artigo em Inglês | MEDLINE | ID: mdl-14660378

RESUMO

Cyanobacterial mass occurrences in freshwater lakes are generally formed by Anabaena, Microcystis, and Planktothrix, which may produce cyclic heptapeptide hepatotoxins, microcystins. Thus far, identification of the most potent microcystin producer in a lake has not been possible due to a lack of quantitative methods. The aim of this study was to identify the microcystin-producing genera and to determine the copy numbers of microcystin synthetase gene E (mcyE) in Lake Tuusulanjärvi and Lake Hiidenvesi in Finland by quantitative real-time PCR. The microcystin concentrations and cyanobacterial cell densities of these lakes were also determined. The microcystin concentrations correlated positively with the sum of Microcystis and Anabaena mcyE copy numbers from both Lake Tuusulanjärvi and Lake Hiidenvesi, indicating that mcyE gene copy numbers can be used as surrogates for hepatotoxic Microcystis and ANABAENA: The main microcystin producer in Lake Tuusulanjärvi was Microcystis spp., since average Microcystis mcyE copy numbers were >30 times more abundant than those of ANABAENA: Lake Hiidenvesi seemed to contain both nontoxic and toxic Anabaena as well as toxic Microcystis strains. Identifying the most potent microcystin producer in a lake could be valuable for designing lake restoration strategies, among other uses.


Assuntos
Anabaena/enzimologia , Dosagem de Genes , Microcystis/enzimologia , Peptídeo Sintases/genética , Peptídeos Cíclicos/biossíntese , Reação em Cadeia da Polimerase/métodos , Anabaena/genética , Primers do DNA , Água Doce/microbiologia , Microcistinas , Microcystis/genética , Dados de Sequência Molecular , Peptídeo Sintases/metabolismo , Especificidade da Espécie
20.
Appl Environ Microbiol ; 70(8): 4551-60, 2004 Aug.
Artigo em Inglês | MEDLINE | ID: mdl-15294785

RESUMO

Cyanobacteria synthesize several types of bioactive secondary metabolites. Anabaena strain 90 produces three types of bioactive peptides, microcystins (inhibitors of protein phosphatases 1 and 2A), anabaenopeptilides, and anabaenopeptins (serine protease inhibitors). To investigate the role of the anabaenopeptilides in Anabaena, wild-type strain 90 (WT) and its anabaenopeptilide deficient mutant (MU) were cultured with various light and phosphate levels to evaluate the effects and coeffects of these growth factors on the concentrations of the three classes of peptides and the growth characteristics. WT and MU grew in comparable ways under the different growth conditions. The total peptide concentration in WT was significantly higher than that in MU (2.5 and 1.4 microg/mg [dry weight], respectively). Interestingly, the average concentration of anabaenopeptins was significantly higher in MU than in WT (0.59 and 0.24 microg/mg [dry weight], respectively). The concentration of microcystins was slightly but not statistically significantly higher in MU than in WT (1.0 and 0.86 microg/mg [dry weight], respectively). In WT, the highest peptide concentrations were usually found after 13 days in cultures grown at medium light intensities (23 micromol m(-2) s(-1)) and with the highest phosphate concentrations (2,600 microg liter(-1)). In MU, the highest peptide concentrations were found in 13-day-old cultures grown at medium light intensities (23 micromol m(-2) s(-1)) and with phosphate concentrations greater than 100 microg liter(-1). The higher concentrations of anabaenopeptins in MU may compensate for the absence of anabaenopeptilides. These findings clearly indicate that these compounds may have some linked function in the producer organism, the nature of which remains to be discovered.


Assuntos
Anabaena/crescimento & desenvolvimento , Luz , Mutação , Peptídeos Cíclicos/metabolismo , Fosfatos/farmacologia , Anabaena/efeitos dos fármacos , Anabaena/genética , Anabaena/metabolismo , Meios de Cultura
SELEÇÃO DE REFERÊNCIAS
DETALHE DA PESQUISA