Detalhe da pesquisa
1.
Biopsy Proteome Scoring to Determine Mucosal Remodeling in Celiac Disease.
Gastroenterology
; 2024 Mar 11.
Artigo
em Inglês
| MEDLINE | ID: mdl-38467384
2.
Individualized VDJ recombination predisposes the available Ig sequence space.
Genome Res
; 31(12): 2209-2224, 2021 Dec.
Artigo
em Inglês
| MEDLINE | ID: mdl-34815307
3.
TCRpower: quantifying the detection power of T-cell receptor sequencing with a novel computational pipeline calibrated by spike-in sequences.
Brief Bioinform
; 23(2)2022 03 10.
Artigo
em Inglês
| MEDLINE | ID: mdl-35062022
4.
Adjustment of spurious correlations in co-expression measurements from RNA-Sequencing data.
Bioinformatics
; 39(10)2023 10 03.
Artigo
em Inglês
| MEDLINE | ID: mdl-37802917
5.
CompAIRR: ultra-fast comparison of adaptive immune receptor repertoires by exact and approximate sequence matching.
Bioinformatics
; 38(17): 4230-4232, 2022 09 02.
Artigo
em Inglês
| MEDLINE | ID: mdl-35852318
6.
ANDA: an open-source tool for automated image analysis of in vitro neuronal cells.
BMC Neurosci
; 24(1): 56, 2023 10 24.
Artigo
em Inglês
| MEDLINE | ID: mdl-37875799
7.
T cell receptor repertoire as a potential diagnostic marker for celiac disease.
Clin Immunol
; 222: 108621, 2021 01.
Artigo
em Inglês
| MEDLINE | ID: mdl-33197618
8.
A map of direct TF-DNA interactions in the human genome.
Nucleic Acids Res
; 47(4): e21, 2019 02 28.
Artigo
em Inglês
| MEDLINE | ID: mdl-30517703
9.
NucBreak: location of structural errors in a genome assembly by using paired-end Illumina reads.
BMC Bioinformatics
; 21(1): 66, 2020 Feb 21.
Artigo
em Inglês
| MEDLINE | ID: mdl-32085722
10.
Colocalization analyses of genomic elements: approaches, recommendations and challenges.
Bioinformatics
; 35(9): 1615-1624, 2019 05 01.
Artigo
em Inglês
| MEDLINE | ID: mdl-30307532
11.
High-Throughput Single-Cell Analysis of B Cell Receptor Usage among Autoantigen-Specific Plasma Cells in Celiac Disease.
J Immunol
; 199(2): 782-791, 2017 07 15.
Artigo
em Inglês
| MEDLINE | ID: mdl-28600290
12.
Mind the gaps: overlooking inaccessible regions confounds statistical testing in genome analysis.
BMC Bioinformatics
; 19(1): 481, 2018 Dec 14.
Artigo
em Inglês
| MEDLINE | ID: mdl-30547739
13.
In the loop: promoter-enhancer interactions and bioinformatics.
Brief Bioinform
; 17(6): 980-995, 2016 11.
Artigo
em Inglês
| MEDLINE | ID: mdl-26586731
14.
Access to ground truth at unconstrained size makes simulated data as indispensable as experimental data for bioinformatics methods development and benchmarking.
Bioinformatics
; 38(21): 4994-4996, 2022 10 31.
Artigo
em Inglês
| MEDLINE | ID: mdl-36073940
15.
The rainfall plot: its motivation, characteristics and pitfalls.
BMC Bioinformatics
; 18(1): 264, 2017 May 18.
Artigo
em Inglês
| MEDLINE | ID: mdl-28521741
16.
NucDiff: in-depth characterization and annotation of differences between two sets of DNA sequences.
BMC Bioinformatics
; 18(1): 338, 2017 Jul 12.
Artigo
em Inglês
| MEDLINE | ID: mdl-28701187
17.
Galaxy Portal: interacting with the galaxy platform through mobile devices.
Bioinformatics
; 32(11): 1743-5, 2016 06 01.
Artigo
em Inglês
| MEDLINE | ID: mdl-26819474
18.
Ten simple rules for quick and dirty scientific programming.
PLoS Comput Biol
; 17(3): e1008549, 2021 03.
Artigo
em Inglês
| MEDLINE | ID: mdl-33705383
19.
A map of direct TF-DNA interactions in the human genome.
Nucleic Acids Res
; 47(14): 7715, 2019 Aug 22.
Artigo
em Inglês
| MEDLINE | ID: mdl-31251803
20.
HiBrowse: multi-purpose statistical analysis of genome-wide chromatin 3D organization.
Bioinformatics
; 30(11): 1620-2, 2014 Jun 01.
Artigo
em Inglês
| MEDLINE | ID: mdl-24511080