Detalhe da pesquisa
1.
Examining DNA breathing with pyDNA-EPBD.
Bioinformatics
; 39(11)2023 11 01.
Artigo
em Inglês
| MEDLINE | ID: mdl-37991847
2.
Elucidating the Role of Wildtype and Variant FGFR2 Structural Dynamics in (Dys)Function and Disorder.
Int J Mol Sci
; 25(8)2024 Apr 20.
Artigo
em Inglês
| MEDLINE | ID: mdl-38674107
3.
Small molecule generation via disentangled representation learning.
Bioinformatics
; 38(12): 3200-3208, 2022 06 13.
Artigo
em Inglês
| MEDLINE | ID: mdl-35511125
4.
Generative Adversarial Learning of Protein Tertiary Structures.
Molecules
; 26(5)2021 Feb 24.
Artigo
em Inglês
| MEDLINE | ID: mdl-33668217
5.
Decoy selection for protein structure prediction via extreme gradient boosting and ranking.
BMC Bioinformatics
; 21(Suppl 1): 189, 2020 Dec 09.
Artigo
em Inglês
| MEDLINE | ID: mdl-33297949
6.
Evaluating Autoencoder-Based Featurization and Supervised Learning for Protein Decoy Selection.
Molecules
; 25(5)2020 Mar 04.
Artigo
em Inglês
| MEDLINE | ID: mdl-32143444
7.
Reducing Ensembles of Protein Tertiary Structures Generated De Novo via Clustering.
Molecules
; 25(9)2020 May 09.
Artigo
em Inglês
| MEDLINE | ID: mdl-32397410
8.
Balancing multiple objectives in conformation sampling to control decoy diversity in template-free protein structure prediction.
BMC Bioinformatics
; 20(1): 211, 2019 Apr 25.
Artigo
em Inglês
| MEDLINE | ID: mdl-31023237
9.
Attenuating dependence on structural data in computing protein energy landscapes.
BMC Bioinformatics
; 20(Suppl 11): 280, 2019 Jun 06.
Artigo
em Inglês
| MEDLINE | ID: mdl-31167640
10.
Deep learning improves antimicrobial peptide recognition.
Bioinformatics
; 34(16): 2740-2747, 2018 08 15.
Artigo
em Inglês
| MEDLINE | ID: mdl-29590297
11.
Computational Structural Biology: Successes, Future Directions, and Challenges.
Molecules
; 24(3)2019 Feb 12.
Artigo
em Inglês
| MEDLINE | ID: mdl-30759724
12.
Graph-Based Community Detection for Decoy Selection in Template-Free Protein Structure Prediction.
Molecules
; 24(5)2019 Feb 28.
Artigo
em Inglês
| MEDLINE | ID: mdl-30823390
13.
Modeling the Tertiary Structure of the Rift Valley Fever Virus L Protein.
Molecules
; 24(9)2019 May 07.
Artigo
em Inglês
| MEDLINE | ID: mdl-31067727
14.
From mutations to mechanisms and dysfunction via computation and mining of protein energy landscapes.
BMC Genomics
; 19(Suppl 7): 671, 2018 Sep 24.
Artigo
em Inglês
| MEDLINE | ID: mdl-30255791
15.
From Extraction of Local Structures of Protein Energy Landscapes to Improved Decoy Selection in Template-Free Protein Structure Prediction.
Molecules
; 23(1)2018 Jan 19.
Artigo
em Inglês
| MEDLINE | ID: mdl-29351266
16.
Principles and Overview of Sampling Methods for Modeling Macromolecular Structure and Dynamics.
PLoS Comput Biol
; 12(4): e1004619, 2016 04.
Artigo
em Inglês
| MEDLINE | ID: mdl-27124275
17.
Computing energy landscape maps and structural excursions of proteins.
BMC Genomics
; 17 Suppl 4: 546, 2016 08 18.
Artigo
em Inglês
| MEDLINE | ID: mdl-27535545
18.
Mapping the Conformation Space of Wildtype and Mutant H-Ras with a Memetic, Cellular, and Multiscale Evolutionary Algorithm.
PLoS Comput Biol
; 11(9): e1004470, 2015 Sep.
Artigo
em Inglês
| MEDLINE | ID: mdl-26325505
19.
Are nicotinic acetylcholine receptors coupled to G proteins?
Bioessays
; 35(12): 1025-34, 2013 Dec.
Artigo
em Inglês
| MEDLINE | ID: mdl-24185813
20.
Exploring representations of protein structure for automated remote homology detection and mapping of protein structure space.
BMC Bioinformatics
; 15 Suppl 8: S4, 2014.
Artigo
em Inglês
| MEDLINE | ID: mdl-25080993