Valuable pigments from microalgae: phycobiliproteins, primary carotenoids, and fucoxanthin.

Phycobiliproteins, carotenoids and fucoxanthin are photosynthetic pigments extracted from microalgae and cyanobacteria with great potential biotechnological applications, as healthy food colorants and cosmetics. Phycocyanin possesses a brilliant blue color, with fluorescent properties making it useful as a reagent for immunological essays. The most important source of phycocyanin is the cyanobacterium Arthrospira platensis, however, recently, the Rhodophyta Galdieria sulphuraria has also been identified as such. The main obstacle to the commercialization of phycocyanin is represented by its chemical instability, strongly reducing its shelf-life. Moreover, the high level of purity needed for pharmaceutical applications requires several steps which increase both the production time and cost. Microalgae (Chlorella, Dunaliella, Nannochloropsis, Scenedesmus) produce several light harvesting carotenoids, and are able to manage with oxidative stress, due to their free radical scavenging properties, which makes them suitable for use as source of natural antioxidants. Many studies focused on the selection of the most promising strains producing valuable carotenoids and on their extraction and purification. Among carotenoids produced by marine microalgae, fucoxanthin is the most abundant, representing more than 10% of total carotenoids. Despite the abundance and diversity of fucoxanthin producing microalgae only a few species have been studied for commercial production, the most relevant being Phaeodactylum tricornutum. Due to its antioxidant activity, fucoxanthin can bring various potential benefits to the prevention and treatment of lifestyle-related diseases. In this review, we update the main results achieved in the production, extraction, purification, and commercialization of these important pigments, motivating the cultivation of microalgae as a source of natural pigments.

Photosynthesis and biochemical characterization of the green alga Chlamydopodium fusiforme (Chlorophyta) grown in a thin-layer cascade.

Photosynthesis, growth and biochemical composition of the biomass of the freshwater microalga Chlamydopodium fusiforme cultures outdoors in a thin-layer cascade were investigated. Gross oxygen production measured off-line in samples taken from the outdoor cultures was correlated with the electron transport rate estimated from chlorophyll a fluorescence measurements. According to photosynthesis measurements, a mean of 38.9 ± 10.3 mol of photons were required to release one mole of O2, which is 4.86 times higher than the theoretical value (8 photons per 1 O2). In contrast, according to the fluorescence measurements, a mean of 11.7 ± 0.74 mol of photons were required to release 1 mol of O2. These findings indicate that fluorescence-based photosynthesis rates may not be fully replace oxygen measurements to evaluate the performance of an outdoor culture. Daily gross biomass productivity was 0.3 g DW L-1 day-1 consistently for 4 days. Biomass productivity was strongly affected by the suboptimal concentration at which the culture was operated and by the respiration rate, as the substantial volume of culture was kept in the dark (about 45% of the total volume). As the cells were exposed to excessive light, the photosynthetic activity was mainly directed to the synthesis of carbohydrates in the biomass. In the morning, carbohydrate content decreased because of the dark respiration. Per contra, protein content in the biomass was lower at the end of the day and higher in the morning due to carbohydrate consumption by respiration. The data gathered in these trials are important for the future exploitation of Chlamydopodium fusiforme as a potential novel species in the field of microalgae for the production of bio-based compounds.

[The tolerance of ten diatom species (Bacillariophyceae) to water's physico-chemical factors in the Sarapiqui River, Costa Rica]. / Tolerancia de diez especies de diatomeas (Bacillariophyceae) a los factores físico-químicos del agua en el Río Sarapiquí, Costa Rica.

Benthic diatoms are the periphyton component most studied in Costa Rican rivers, yet there is still much to be known about their ecology. This study aims to contribute to this knowledge. Periphyton samples from six locations along the middle reach of Sarapiquí river and some of its tributaries were taken and analyzed from 2010 to 2012. A total count of 400 frustules was performed in each sample to obtain relative abundances of each species. Ten species, which were easily recognized at the light microscope, were analyzed here: Achnanthidium exiguum, Coconneis placentula, Cymbella tumida, Luticola goeppertiana, Luticola ventricosa, Navicula symmetrica, Nitzchia clausii, Nupela praecipua, Reimeria sinuata and Synedra goulardi. Their abundance was related to physico chemical data at each site for every sampling date (dissolved oxygen, temperature, conductivity, total suspended solids, turbidity, pH and alkalinity) with a canonical correspondence analysis (CCA) that allowed distinguishing three sectors along the river according to altitude. These sectors differed by substrate, riparian vegetation cover, and physic-chemical parameters, all of which resulted in differences in diatom species composition among them. Optimum values and tolerances form each environmental parameter were calculated for each species. Our results showed that A. exiguum, R. sinuata, L. ventricosa and C. tumida, were dominant in clean and well oxygenated waters with low temperatures. The species N. praecipua, S. goulardi, C. placentula, L. goeppertiana, N. clausii and N. symmetrica inhabited warm waters with high turbidity and low oxygen. The species A. exiguum, R. sinuata were dominant in sites with low alkalinity and conductivity, whereas species like N. symmetrica, C. tumida and L. ventricosa showed a positive relationship with conductivity and pH. The studied species showed good characteristics of their value as water quality indicators, yet due to different interpretations by several authors, it is necessary to perform further studies at more river basins in the country.

[Sedimentological Implications of the change in the coverage of mangrove forest in Boca Zacate, Térraba-Sierpa National Wetlands, Costa Rica]. / Implicaciones sedimentológicas sobre el cambio en la cobertura del bosque de manglar en Boca Zacate, Humedal Nacional Térraba-Sierpe, Costa Rica.

In the last sixty years many geomorphological changes have occurred in Costa Rica's Térraba-Sierpe National Wetlands. Changes in coastal geomorphology are generally associated with erosion or accretion of sediment, which has led to the removal of sections of mangrove forests or sediment banks colonized by mangroves. The aim of this study was to analyze sedimentation as a leading process in the dynamics of coastal morphology and its implications for mangrove forest cover in the Boca Zacate area of Térraba-Sierpe wetlands. The study was conducted in the sectors of Bocón, Brujo and Coco Island in Boca Zacate, from 2008 to 2013. The research was based on a multi-temporal analysis of coastal morphology using aerial photographs from the years 1948, 1960, 1974, 1978, 1984, 1992 and 2011. The following measurements were also performed: monthly sedimentation rate (g/cm2/day), and granulometric composition and content of chemical elements in the sediments of the study area. These last two measurements were performed once each in the dry and rainy seasons during the years of study. The results indicated that over the past 60 years, Boca Zacate has witnessed a process of sustained erosion; from 1948 through 2001, losing 10.6 % of its land and approximately 8.9 % of its forest cover. It has also experienced accretion in the area of Coco Island. The Brujo sector showed the highest sedimentation rate and the Camibar estuary, the lowest. The dominant type of sediment in all study sites was sand, followed by clay and silt. The most widespread chemical elements (mg/L) included magnesium, calcium and potassium; others, such as manganese, iron, aluminum, phosphorus, zinc and copper, were measured in smaller amounts. Transport, composition and quantity of sediment in Boca Zacate are crucial to the changes that have occurred on the coastal area of La Boca, where the presence of dead trees was evident. This geomorphological analysis holds great importance for future guidelines and actions for the conservation and integrated management of the mangrove in Térraba-Sierpe National Wetlands.

Photosynthesis Monitoring in Microalgae Cultures Grown on Municipal Wastewater as a Nutrient Source in Large-Scale Outdoor Bioreactors.

Microalgae cultures were used for a WW treatment to remediate nutrients while producing biomass and recycling water. In these trials, raceway ponds (RWPs; 1 and 0.5 ha) were located next to a municipal (WW) treatment plant in Mérida, Spain. The ponds were used for continuous, all-year-round microalgae production using WW as a source of nutrients. Neither CO2 nor air was supplied to cultures. The objective was to validate photosynthesis monitoring techniques in large-scale bioreactors. Various in-situ/ex-situ methods based on chlorophyll fluorescence and oxygen evolution measurements were used to follow culture performance. Photosynthesis variables gathered with these techniques were compared to the physiological behavior and growth of cultures. Good photosynthetic activity was indicated by the build-up of dissolved oxygen concentration up to 380% saturation, high photochemical yield (Fv/Fm = 0.62-0.71), and relative electron transport rate rETR between 200 and 450 µmol e- m-2 s-1 at midday, which resulted in biomass productivity of about 15-25 g DW m-2 day-1. The variables represent reliable markers reflecting the physiological status of microalgae cultures. Using waste nutrients, the biomass production cost can be significantly decreased for abundant biomass production in large-scale bioreactors, which can be exploited for agricultural purposes.

Tolerancia de diez especies de diatomeas (Bacillariophyceae) a los factores físico-químicos del agua en el Río Sarapiquí, Costa Rica / The tolerance of ten diatom species (Bacillariophyceae) to water's physico-chemical factors in the Sarapiqui River, Costa Rica

ResumenLas diatomeas del bentos son el componente más estudiado del perifiton en los ríos de Costa Rica, sin embargo aún queda mucho por conocer sobre su ecología. Por eso en el presente estudio se analizó el perifiton en seis diferentes sitios en la cuenca medio del Río Sarapiquí en el 2010, 2011 y 2012. En cada uno de los muestreos se realizó el conteo de 400 frústulas, de las cuales se obtuvo la abundancia relativa de las especies: Achnanthidium exiguum, Coconneis placentula, Cymbella tumida, Luticola goeppertiana, Luticola ventricosa, Navicula symmetrica, Nitzchia clausii, Nupela praecipua, Reimeria sinuata y Synedra goulardi. Esta información fue relacionada con los datos físico químicos (oxígeno disuelto, temperatura, conductividad, total de sedimentos en suspensión, turbidez, pH y alcalinidad) medidos en cada uno de los sitios. Con el propósito de observar las relaciones entre los diferentes sitios dentro de la cuenca, se utilizó un análisis de correspondencia canónica (ACC), lo que permitió distinguir tres sectores de acuerdo a la altitud. Estos sectores se diferencian en el tipo de sustrato, cobertura riparia vegetal y parámetros físico-químicos, lo que propicia diferencias en la composición de especies de diatomeas entre ellos. Se obtuvieron los valores óptimos calculados y tolerancia calculada para cada una de las especies. Los resultados obtenidos indican que las especies: A. exiguum, R. sinuata,L. ventricosa y C. tumida, dominan en aguas limpias, oxigenadas y baja temperatura. Las especies N. praecipua, S. goulardi, C. placentula, L. goeppertiana, N. clausii y N. symmetrica se encuentran en aguas cálidas, alta turbidez y poco oxigenadas. Las especies A. exiguum, R. sinuata, prevalecen en sitios con agua alcalina y baja conductividad y las especies N. symmetrica, C. tumida y L. ventricosa presentan una relación positiva con la conductividad y el pH de las aguas. Las especies estudiadas mostraron buenos indicios de su valor como indicadores de calidad del agua, sin embargo, debido a diferencias de interpretación por varios autores, es necesario realizar más estudios en otras cuencas hidrográficas en el país.

Abstract The tolerance of ten diatom species (Bacillariophyceae) to water's physico-chemical factors in the Sarapiqui River, Costa Rica. Benthic diatoms are the periphyton component most studied in Costa Rican rivers, yet there is still much to be known about their ecology. This study aims to contribute to this knowledge. Periphyton samples from six locations along the middle reach of Sarapiquí river and some of its tributaries were taken and analyzed from 2010 to 2012. A total count of 400 frustules was performed in each sample to obtain relative abundances of each species. Ten species, which were easily recognized at the light microscope, were analyzed here: Achnanthidium exiguum, Coconneis placentula, Cymbella tumida, Luticola goeppertiana, Luticola ventricosa, Navicula symmetrica, Nitzchia clausii, Nupela praecipua, Reimeria sinuata and Synedra goulardi. Their abundance was related to physico chemical data at each site for every sampling date (dissolved oxygen, temperature, conductivity, total suspended solids, turbidity, pH and alkalinity) with a canonical correspondence analysis (CCA) that allowed distinguishing three sectors along the river according to altitude. These sectors differed by substrate, riparian vegetation cover, and physic-chemical parameters, all of which resulted in differences in diatom species composition among them. Optimum values and tolerances form each environmental parameter were calculated for each species. Our results showed that A. exiguum, R. sinuata,L. ventricosa and C. tumida, were dominant in clean and well oxygenated waters with low temperatures. The species N. praecipua, S. goulardi, C. placentula, L. goeppertiana, N. clausii and N. symmetrica inhabited warm waters with high turbidity and low oxygen. The species A. exiguum, R. sinuata were dominant in sites with low alkalinity and conductivity, whereas species like N. symmetrica, C. tumida and L. ventricosa showed a positive relationship with conductivity and pH. The studied species showed good characteristics of their value as water quality indicators, yet due to different interpretations by several authors, it is necessary to perform further studies at more river basins in the country. Rev. Biol. Trop. 64 (1): 105-115. Epub 2016 March 01.

Abundancia y morfometría de Anadara tuberculosa y A. similis (Mollusca: Bivalvia) en el Manglar de Purruja, Golfo Dulce, Costa Rica / Abundance and morphometry of Anadara tuberculosa and A. similis (Mollusca: Bivalvia) in the Manglar de Purruja, Dulce Gulf, Costa Rica

The density, population, length, yield and sex proportion of the mollusks Anadara tuberculosa and A. similis were studied in Bahía de Golfito, Golfo Dulce, Pacific coast of Costa Rica from February 1998 to February 1999. A. tuberculosa was more abundant (0.9 units m(-2)), than A. similis (0.2 units m(-2)); the highest abundance was found at the canal mouths. The average lengths were 43.3 mm for A. tuberculosa and 42.8 mm for A. similis (both under the Costa Rican legal minimal length for exploitation: 47 mm). Maximum lengths were measured in the middle and upstream Canal Mayor, respectively: 43.0 mm and 43.4 mm. The correlation between length and fresh weight was 0.81 (Pearson). The average total weights were 26.2 g for A. tuberculosa and 19.1 g for A. similis. The condition index (a meat yield measurement) was higher in A. similis (21.2%) than in A. tuberculosa (17.2%). The maximum yield for both species lies in the 31-35 mm range. The male ratio was 43.7%. A species recovery plan is urgent because these results suggest both a decrease in density and illegal exploitation.

The use of water chemistry and benthic diatom communities for qualification of a polluted tropical river in Costa Rica

The water quality of several sections of a tropical river subjected to severe pollution was studied through physico-chemical water analysis and benthic diatom assemblages. The methodology follows the concept of differential species groups and that of its modification for the groups of nutrient-differentiating species for rivers rich in both oxygen and inorganic nutrients. The trophic indication of the latter authors correspond clearly with the results of chemical observations made in this study. The most abundant species found in this river were Navicula goeppertiana, Gomphonema parvulum, Gomphonema sp. aff. pumilum, Nitzschia palea, Nitzschia amphibia, Nitzschia clausii Nitzschia inconspicua, Navicula seminulum, Navicula sp. aff. cryptocephala, Navicula schroeterii var. escambia, Cymbella sinuata and Surirella sp. aff. roba. These species are known to be tolerant to organic pollution and eutrophication. Therefore we may conclude that diatoms are useful for biological monitoring of disturbed tropical rivers