Infrared-Visible Image Fusion Based on Semantic Guidance and Visual Perception.

Infrared-visible fusion has great potential in night-vision enhancement for intelligent vehicles. The fusion performance depends on fusion rules that balance target saliency and visual perception. However, most existing methods do not have explicit and effective rules, which leads to the poor contrast and saliency of the target. In this paper, we propose the SGVPGAN, an adversarial framework for high-quality infrared-visible image fusion, which consists of an infrared-visible image fusion network based on Adversarial Semantic Guidance (ASG) and Adversarial Visual Perception (AVP) modules. Specifically, the ASG module transfers the semantics of the target and background to the fusion process for target highlighting. The AVP module analyzes the visual features from the global structure and local details of the visible and fusion images and then guides the fusion network to adaptively generate a weight map of signal completion so that the resulting fusion images possess a natural and visible appearance. We construct a joint distribution function between the fusion images and the corresponding semantics and use the discriminator to improve the fusion performance in terms of natural appearance and target saliency. Experimental results demonstrate that our proposed ASG and AVP modules can effectively guide the image-fusion process by selectively preserving the details in visible images and the salient information of targets in infrared images. The SGVPGAN exhibits significant improvements over other fusion methods.

CVGAE: A Self-Supervised Generative Method for Gene Regulatory Network Inference Using Single-Cell RNA Sequencing Data.

Gene regulatory network (GRN) inference based on single-cell RNA sequencing data (scRNAseq) plays a crucial role in understanding the regulatory mechanisms between genes. Various computational methods have been employed for GRN inference, but their performance in terms of network accuracy and model generalization is not satisfactory, and their poor performance is caused by high-dimensional data and network sparsity. In this paper, we propose a self-supervised method for gene regulatory network inference using single-cell RNA sequencing data (CVGAE). CVGAE uses graph neural network for inductive representation learning, which merges gene expression data and observed topology into a low-dimensional vector space. The well-trained vectors will be used to calculate mathematical distance of each gene, and further predict interactions between genes. In overall framework, FastICA is implemented to relief computational complexity caused by high dimensional data, and CVGAE adopts multi-stacked GraphSAGE layers as an encoder and an improved decoder to overcome network sparsity. CVGAE is evaluated on several single cell datasets containing four related ground-truth networks, and the result shows that CVGAE achieve better performance than comparative methods. To validate learning and generalization capabilities, CVGAE is applied in few-shot environment by change the ratio of train set and test set. In condition of few-shot, CVGAE obtains comparable or superior performance.

scDMAE: A Generative Denoising Model Adopted Mask Strategy for scRNA-Seq Data Recovery.

The advent of single-cell RNA sequencing (scRNA-seq) technology has revolutionized gene expression studies at the single-cell level. However, the presence of technical noise and data sparsity in scRNA-seq often undermines the accuracy of subsequent analyses. Existing methods for denoising and imputing scRNA-seq data often rely on stringent assumptions about data distribution, limiting the effectiveness of data recovery. In this study, we propose the scDMAE model for denoising and recovery of scRNA-seq data. First, the model fuses gene expression features and topological features to discern the primary expression patterns of genes in cells. Then, an autoencoder with a masking strategy is used to model dropout events and separate potential noise in the data. Finally, the model incorporates the original raw data to recover the true biological expression value. By conducting experiments on various types of scRNA-Seq datasets, scDMAE demonstrates superior performance compared to other comparative methods based on six distinct evaluation metrics in downstream analysis. The scDMAE method can accurately cluster similar cell populations, identify differential genes and infer cell trajectories.