Pesquisa | Portal de Pesquisa da BVS Enfermagem

1.

IMG/PR: a database of plasmids from genomes and metagenomes with rich annotations and metadata.

Camargo, Antonio Pedro; Call, Lee; Roux, Simon; Nayfach, Stephen; Huntemann, Marcel; Palaniappan, Krishnaveni; Ratner, Anna; Chu, Ken; Mukherjeep, Supratim; Reddy, T B K; Chen, I-Min A; Ivanova, Natalia N; Eloe-Fadrosh, Emiley A; Woyke, Tanja; Baltrus, David A; Castañeda-Barba, Salvador; de la Cruz, Fernando; Funnell, Barbara E; Hall, James P J; Mukhopadhyay, Aindrila; Rocha, Eduardo P C; Stalder, Thibault; Top, Eva; Kyrpides, Nikos C.

Nucleic Acids Res ; 52(D1): D164-D173, 2024 Jan 05.

Artigo em Inglês | MEDLINE | ID: mdl-37930866

2.

Estimating the transfer rates of bacterial plasmids with an adapted Luria-Delbrück fluctuation analysis.

Kosterlitz, Olivia; Muñiz Tirado, Adamaris; Wate, Claire; Elg, Clint; Bozic, Ivana; Top, Eva M; Kerr, Benjamin.

PLoS Biol ; 20(7): e3001732, 2022 07.

Artigo em Inglês | MEDLINE | ID: mdl-35877684

3.

Evolutionary "Crowdsourcing": Alignment of Fitness Landscapes Allows for Cross-species Adaptation of a Horizontally Transferred Gene.

Kosterlitz, Olivia; Grassi, Nathan; Werner, Bailey; McGee, Ryan Seamus; Top, Eva M; Kerr, Benjamin.

Mol Biol Evol ; 40(11)2023 Nov 03.

Artigo em Inglês | MEDLINE | ID: mdl-37931146

4.

Polluted wetlands contain multidrug-resistance plasmids encoding CTX-M-type extended-spectrum ß-lactamases.

Botts, Ryan T; Page, Dawne M; Bravo, Joseph A; Brown, Madelaine L; Castilleja, Claudia C; Guzman, Victoria L; Hall, Samantha; Henderson, Jacob D; Kenney, Shelby M; Lensink, Mariele E; Paternoster, Megan V; Pyle, Sarah L; Ustick, Lucas; Walters-Laird, Chara J; Top, Eva M; Cummings, David E.

Plasmid ; 126: 102682, 2023 05.

Artigo em Inglês | MEDLINE | ID: mdl-37023995

5.

Long-Range PCR Reveals the Genetic Cargo of IncP-1 Plasmids in the Complex Microbial Community of an On-Farm Biopurification System Treating Pesticide-Contaminated Wastewater.

Dunon, Vincent; Holmsgaard, Peter N; Dealtry, Simone; Lavigne, Rob; Sørensen, Søren J; Smalla, Kornelia; Top, Eva M; Springael, Dirk.

Appl Environ Microbiol ; 88(3): e0164821, 2022 02 08.

Artigo em Inglês | MEDLINE | ID: mdl-34878814

6.

Evolving Populations in Biofilms Contain More Persistent Plasmids.

Stalder, Thibault; Cornwell, Brandon; Lacroix, Jared; Kohler, Bethel; Dixon, Seth; Yano, Hirokazu; Kerr, Ben; Forney, Larry J; Top, Eva M.

Mol Biol Evol ; 37(6): 1563-1576, 2020 06 01.

Artigo em Inglês | MEDLINE | ID: mdl-32027370

7.

Contagious Antibiotic Resistance: Plasmid Transfer among Bacterial Residents of the Zebrafish Gut.

Loftie-Eaton, Wesley; Crabtree, Angela; Perry, David; Millstein, Jack; Baytosh, Justin; Stalder, Thibault; Robison, Barrie D; Forney, Larry J; Top, Eva M.

Appl Environ Microbiol ; 87(9)2021 04 13.

Artigo em Inglês | MEDLINE | ID: mdl-33637574

8.

Dairy manure as a potential source of crop nutrients and environmental contaminants.

Hill, Danika; Morra, Matthew J; Stalder, Thibault; Jechalke, Sven; Top, Eva; Pollard, Anne T; Popova, Inna.

J Environ Sci (China) ; 100: 117-130, 2021 Feb.

Artigo em Inglês | MEDLINE | ID: mdl-33279025

9.

Targeted metagenomics demonstrates the ecological role of IS1071 in bacterial community adaptation to pesticide degradation.

Dunon, Vincent; Bers, Karolien; Lavigne, Rob; Top, Eva M; Springael, Dirk.

Environ Microbiol ; 20(11): 4091-4111, 2018 11.

Artigo em Inglês | MEDLINE | ID: mdl-30207068

10.

Plasmids on the move: Latest advances in Plasmid Biology from ISPB2022.

Bouet, Jean-Yves; Cornet, François; Top, Eva.

Plasmid ; 127: 102697, 2023 07.

Artigo em Inglês | MEDLINE | ID: mdl-37364738

11.

Evolutionary Paths That Expand Plasmid Host-Range: Implications for Spread of Antibiotic Resistance.

Loftie-Eaton, Wesley; Yano, Hirokazu; Burleigh, Stephen; Simmons, Ryan S; Hughes, Julie M; Rogers, Linda M; Hunter, Samuel S; Settles, Matthew L; Forney, Larry J; Ponciano, José M; Top, Eva M.

Mol Biol Evol ; 33(4): 885-97, 2016 Apr.

Artigo em Inglês | MEDLINE | ID: mdl-26668183

12.

Evolved plasmid-host interactions reduce plasmid interference cost.

Yano, Hirokazu; Wegrzyn, Katarznya; Loftie-Eaton, Wesley; Johnson, Jenny; Deckert, Gail E; Rogers, Linda M; Konieczny, Igor; Top, Eva M.

Mol Microbiol ; 101(5): 743-56, 2016 09.

Artigo em Inglês | MEDLINE | ID: mdl-27121483

13.

Annotation of plasmid genes.

Thomas, Christopher M; Thomson, Nicholas R; Cerdeño-Tárraga, Ana M; Brown, Celeste J; Top, Eva M; Frost, Laura S.

Plasmid ; 91: 61-67, 2017 05.

Artigo em Inglês | MEDLINE | ID: mdl-28365184

14.

Responses of Soil Bacterial Communities to Nitrogen Deposition and Precipitation Increment Are Closely Linked with Aboveground Community Variation.

Li, Hui; Xu, Zhuwen; Yang, Shan; Li, Xiaobin; Top, Eva M; Wang, Ruzhen; Zhang, Yuge; Cai, Jiangping; Yao, Fei; Han, Xingguo; Jiang, Yong.

Microb Ecol ; 71(4): 974-89, 2016 May.

Artigo em Inglês | MEDLINE | ID: mdl-26838999

15.

Inferring the evolutionary history of IncP-1 plasmids despite incongruence among backbone gene trees.

Sen, Diya; Brown, Celeste J; Top, Eva M; Sullivan, Jack.

Mol Biol Evol ; 30(1): 154-66, 2013 Jan.

Artigo em Inglês | MEDLINE | ID: mdl-22936717

16.

Flow cytometry and real-time quantitative PCR as tools for assessing plasmid persistence.

Loftie-Eaton, Wesley; Tucker, Allison; Norton, Ann; Top, Eva M.

Appl Environ Microbiol ; 80(17): 5439-46, 2014 Sep.

Artigo em Inglês | MEDLINE | ID: mdl-24973062

17.

Editorial.

Top, Eva M; Traxler, Beth; Rood, Julian I.

Plasmid ; 105: 102437, 2019 09.

Artigo em Inglês | MEDLINE | ID: mdl-31472205

18.

Plasmids, a molecular cornerstone of antimicrobial resistance in the One Health era.

Castañeda-Barba, Salvador; Top, Eva M; Stalder, Thibault.

Nat Rev Microbiol ; 22(1): 18-32, 2024 Jan.

Artigo em Inglês | MEDLINE | ID: mdl-37430173

19.

Epidemiological model can forecast COVID-19 outbreaks from wastewater-based surveillance in rural communities.

Meadows, Tyler; Coats, Erik R; Narum, Solana; Top, Eva; Ridenhour, Benjamin J; Stalder, Thibault.

medRxiv ; 2024 Feb 03.

Artigo em Inglês | MEDLINE | ID: mdl-38352372

20.

Host- plasmid network structure in wastewater is linked to antimicrobial resistance genes.

Risely, Alice; Newbury, Arthur; Stalder, Thibault; Simmons, Benno I; Top, Eva M; Buckling, Angus; Sanders, Dirk.

Nat Commun ; 15(1): 555, 2024 Jan 16.

Artigo em Inglês | MEDLINE | ID: mdl-38228585

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