Detalhe da pesquisa
1.
Nucleosome spacing controls chromatin spatial structure and accessibility.
Biophys J
; 123(7): 847-857, 2024 Apr 02.
Artigo
em Inglês
| MEDLINE | ID: mdl-38419332
2.
Cohesin and CTCF complexes mediate contacts in chromatin loops depending on nucleosome positions.
Biophys J
; 121(24): 4788-4799, 2022 12 20.
Artigo
em Inglês
| MEDLINE | ID: mdl-36325618
3.
Differences in nanoscale organization of regulatory active and inactive human chromatin.
Biophys J
; 121(6): 977-990, 2022 03 15.
Artigo
em Inglês
| MEDLINE | ID: mdl-35150617
4.
The initial engraftment of tumor cells is critical for the future growth pattern: a mathematical study based on simulations and animal experiments.
BMC Cancer
; 20(1): 524, 2020 Jun 05.
Artigo
em Inglês
| MEDLINE | ID: mdl-32503458
5.
Simulation of metastatic progression using a computer model including chemotherapy and radiation therapy.
J Biomed Inform
; 57: 74-87, 2015 Oct.
Artigo
em Inglês
| MEDLINE | ID: mdl-26190266
6.
Changing chromatin fiber conformation by nucleosome repositioning.
Biophys J
; 107(9): 2141-50, 2014 Nov 04.
Artigo
em Inglês
| MEDLINE | ID: mdl-25418099
7.
Perforin-dependent direct cytotoxicity in natural killer cells induces considerable knockdown of spontaneous lung metastases and computer modelling-proven tumor cell dormancy in a HT29 human colon cancer xenograft mouse model.
Mol Cancer
; 13: 244, 2014 Nov 05.
Artigo
em Inglês
| MEDLINE | ID: mdl-25373310
8.
Modeling nucleosome position distributions from experimental nucleosome positioning maps.
Bioinformatics
; 29(19): 2380-6, 2013 Oct 01.
Artigo
em Inglês
| MEDLINE | ID: mdl-23846748
9.
Probing the elasticity of DNA on short length scales by modeling supercoiling under tension.
Biophys J
; 103(2): 323-30, 2012 Jul 18.
Artigo
em Inglês
| MEDLINE | ID: mdl-22853910
10.
Dissecting DNA-histone interactions in the nucleosome by molecular dynamics simulations of DNA unwrapping.
Biophys J
; 101(8): 1999-2008, 2011 Oct 19.
Artigo
em Inglês
| MEDLINE | ID: mdl-22004754
11.
Exploring the conformational space of chromatin fibers and their stability by numerical dynamic phase diagrams.
Biophys J
; 98(6): 1028-37, 2010 Mar 17.
Artigo
em Inglês
| MEDLINE | ID: mdl-20303860
12.
DNA-DNA interactions in tight supercoils are described by a small effective charge density.
Phys Rev Lett
; 105(15): 158101, 2010 Oct 08.
Artigo
em Inglês
| MEDLINE | ID: mdl-21230940
13.
Parallel high-performance grid computing: capabilities and opportunities of a novel demanding service and business class allowing highest resource efficiency.
Stud Health Technol Inform
; 159: 264-71, 2010.
Artigo
em Inglês
| MEDLINE | ID: mdl-20543448
14.
Absence of convection in solid tumors caused by raised interstitial fluid pressure severely limits success of chemotherapy-a numerical study in cancers.
Math Biosci Eng
; 17(5): 6128-6148, 2020 09 14.
Artigo
em Inglês
| MEDLINE | ID: mdl-33120592
15.
Modeling genomic data with type attributes, balancing stability and maintainability.
BMC Bioinformatics
; 10: 97, 2009 Mar 27.
Artigo
em Inglês
| MEDLINE | ID: mdl-19327130
16.
Modeling Growth of Tumors and Their Spreading Behavior Using Mathematical Functions.
Methods Mol Biol
; 1878: 263-277, 2019.
Artigo
em Inglês
| MEDLINE | ID: mdl-30378082
17.
Nucleosome geometry and internucleosomal interactions control the chromatin fiber conformation.
Biophys J
; 95(8): 3692-705, 2008 Oct.
Artigo
em Inglês
| MEDLINE | ID: mdl-18212006
18.
The effect of internucleosomal interaction on folding of the chromatin fiber.
Biophys J
; 95(8): 3677-91, 2008 Oct.
Artigo
em Inglês
| MEDLINE | ID: mdl-18658212
19.
Radiotherapy and chemotherapy change vessel tree geometry and metastatic spread in a small cell lung cancer xenograft mouse tumor model.
PLoS One
; 12(11): e0187144, 2017.
Artigo
em Inglês
| MEDLINE | ID: mdl-29107953
20.
Affinity, stoichiometry and cooperativity of heterochromatin protein 1 (HP1) binding to nucleosomal arrays.
J Phys Condens Matter
; 27(6): 064110, 2015 Feb 18.
Artigo
em Inglês
| MEDLINE | ID: mdl-25563825