Histone Modifications Regulate Chromatin Compartmentalization by Contributing to a Phase Separation Mechanism.

Eukaryotic chromosomes contain compartments of various functions, which are marked by and enriched with specific histone modifications. However, the molecular mechanisms by which these histone marks function in chromosome compartmentalization are poorly understood. Constitutive heterochromatin is a largely silent chromosome compartment characterized in part by H3K9me2 and 3. Here, we show that heterochromatin protein 1 (HP1), an H3K9me2 and 3 "reader," interacts with SUV39H1, an H3K9me2 and 3 "writer," and with TRIM28, an abundant HP1 scaffolding protein, to form complexes with increased multivalent engagement of H3K9me2 and 3-modified chromatin. H3K9me2 and 3-marked nucleosomal arrays and associated complexes undergo phase separation to form macromolecule-enriched liquid droplets. The droplets are reminiscent of heterochromatin as they are highly dense chromatin-containing structures that are resistant to DNase and exclude the general transcription factor TFIIB. Our data suggest a general mechanism by which histone marks regulate chromosome compartmentalization by promoting phase separation.

Microfluidic Preparation of pH-Responsive Microsphere Fibers and Their Controlled Drug Release Properties.

In this study, a capillary microfluidic device was constructed, and sodium alginate solution and a pH-sensitive hydrophobic polymer (p(BMA-co-DAMA-co-MMA)) solution were introduced into the device for the preparation of hydrogel fibers loaded with polymer microspheres. The structure of the microsphere fiber, including the size and spacing of the microspheres, could be controlled by flow rate, and the microspheres were able to degrade and release cargo responding to acidic pH conditions. By modification with carboxymethylcellulose (CMC), alginate hydrogel exhibited enhanced pH sensitivity (shrunk in acidic while swollen in basic condition). This led to an impact on the diffusion rate of the molecules released from the inner microspheres. The microsphere fiber showed dramatic and negligible degradation and drug release in tumor cell (i.e., A431 and A549 cells) and normal cell environments, respectively. These results indicated that the microsphere fiber prepared in this study showed selective drug release in acidic environments, such as tumor and inflammation sites, which could be applied as a smart surgical dressing with normal tissue protective properties.

Industrial aerobic composting and the addition of microbial agents largely reduce the risks of heavy metal and ARG transfer through livestock manure.

Composting is an effective and necessary modality in the recycling of agricultural wastes such as livestock manure, furfural, and straw. However, the risks of heavy metals (HMs) and antibiotic resistance genes (ARGs) during industrial-scale composting process have not been adequately assessed, especially with the addition of bacterial agents. In this study, changes in HMs toxicity, ARGs propagation and microbial community structure during industrial-scale aerobic composting of livestock manure were firstly investigated with various substrates addition. Moreover, the effect of the addition of bacterial agents (Bacillus strains) was evaluated. The results showed that industrial aerobic composting process could immobilize various HMs with different extents and significantly reduce the levels of ARGs such as intl1 and oqxB genes. The addition of Bacillus strains could further reduce the levels of most detected ARGs and the bioavailability of Cu and Cr, and the relative abundance of ereA and tetA was undetectable in some materials. After composting, the main bacterial community structures were similar among different substrates irrespective of bacterial agents and indicated that the composting process was the main driver for their change. This study provides a scientific reference for the safe reuse of livestock manure.

Multiplexed detection of micro-RNAs based on microfluidic multi-color fluorescence droplets.

In this work, simple, rapid, and low-cost multiplexed detection of tumor-related micro-RNAs (miRNAs) was achieved based on multi-color fluorescence on a microfluidic droplet chip, which simplified the complexity of light path to a half. A four-T-junction structure was fabricated to form uniform nano-volume droplet arrays with customized contents. Multi-color quantum dots (QDs) used as the fluorescence labels were encapsulated into droplets to develop the multi-path fluorescence detection module. We designed an integrated multiplex fluorescence resonance energy transfer system assisted by multiple QDs (four colors) and one quencher to detect four tumor-related miRNAs (miRNA-20a, miRNA-21, miRNA-155, and miRNA-221). The qualitative analysis of miRNAs was realized by the color identification of QDs, while the quantitative detection of miRNAs was achieved based on the linear relationship between the quenching efficiency of QDs and the concentration of miRNAs. The practicability of the multiplex detection device was further confirmed by detecting four tumor-related miRNAs in real human serum samples. The detection limits of four miRNAs ranged from 35 to 39 pmol/L was achieved without any target amplification. And the linear range was from 0.1 nmol/L to 1 µmol/L using 10 nL detection volume (one droplet) under the detection speed of 320 droplets per minute. The multiple detection system for miRNAs is simple, fast, and low-cost and will be a powerful platform for clinical diagnostic analysis. Graphical abstract.

Saliva Analysis Based on Microfluidics: Focusing the Wide Spectrum of Target Analyte.

Saliva is one of the most critical human body fluids that can reflect the state of the human body. The detection of saliva is of great significance for disease diagnosis and health monitoring. Microfluidics, characterized by microscale size and high integration, is an ideal platform for the development of rapid and low-cost disease diagnostic techniques and devices. Microfluidic-based saliva testing methods have aroused considerable interest due to the increasing need for noninvasive testing and frequent or long-term testing. This review briefly described the significance of saliva analysis and generally classified the targets in saliva detection into pathogenic microorganisms, inorganic substances, and organic substances. By using this classification as a benchmark, the state-of-the-art research results on microfluidic detection of various substances in saliva were summarized. This work also put forward the challenges and future development directions of microfluidic detection methods for saliva.

Effect of Coal Dust Content on the Low-temperature Oxidation of Silo Coal.

Coal's low-temperature oxidation (LTO) poses a significant threat to the safety of storing coal in silos. This study investigates the impact of coal dust content on the LTO characteristics of silo coal samples. The results indicate that the larger the coal dust content the higher the oxygen (O2) consumption rate and carbon monoxide (CO) generation rate and the stronger the LTO capacity. To clear the mechanism of the impact, the thermal physical characteristics were studied and thermogravimetric and differential thermal analysis (TG-DTA) experiments were performed on various coal samples. The results show that, first, with the increase of coal dust content, the thermal conductivity of the silo coal samples initially increased and then decreased, whereas the thermal diffusion and heat capacity decreased and increased linearly, respectively. This indicates that the heat storage capacity of the silo coal sample is enhanced with the increase of the coal dust content. Second, the maximum oxygen absorption rate and differential thermal reduction value of the coal samples increased linearly with the decrease in their particle size; this result verifies that decreasing the particle size of silo coal can advance its LTO process. The study findings indicate that the risk of LTO and spontaneous combustion of silo coal can be effectively reduced by controlling the coal dust content (fine coal particles).

Monochromatic light-enhanced photocatalytic CO2 reduction based on exciton properties of two-dimensional lead halide perovskites.

Converting CO2 into valuable solar fuels through photocatalysis has been considered a green and sustainable technology that is promising for alleviating global warming and providing energy in an environmentally friendly manner. However, traditional photocatalysts generally suffer from low surface-reactive reaction sites, inefficient light harvesting and rapid recombination of electron-hole pairs. Lead halide perovskite materials have been considered ideal semiconductor photocatalysts for photocatalytic CO2 reduction due to their tunable band gaps, strong light absorption, and low cost. Herein, a series of L2Csn-1PbnX3n+1 (L = ba, ha, oa; X = Cl, Br, I; n = 1, 2) 2D layered perovskites were synthesized by a facile solvothermal method. The effects of alkyl amine chain length, halogen atoms and inorganic layer number on their properties were studied. More importantly, these 2D materials were used as photocatalysts for CO2 reduction without any sacrificial agents. These 2D perovskites exhibited markedly increased performance in comparison with 3D bulk materials, benefitting from the larger surface-area-to-volume ratio and faster and more efficient exciton dissociation, which achieved the highest CO yield of 158.69 µmol g-1 h-1 and CH4 yield of 6.9 µmol g-1 h-1 through the design of the photocatalytic system. In addition, the influence of light source conditions on photocatalysis was studied systematically, including light source intensity and wavelength. The experimental results indicated that an appropriate solvent, high light intensity and monochromatic light source matching the wavelength of exciton absorption can effectively improve the photocatalytic efficiency.

Suppression Characteristics and Mechanism of Molasses Solution on Coal Dust: A Low-Cost and Environment-Friendly Suppression Method in Coal Mines.

Coal dust pollution poses a serious public health threat. This study aimed to investigate the feasibility of creating a coal dust suppressant using molasses, a byproduct of the sugar industry. We studied the effects of a molasses solution of varying concentrations (i.e., ranging from 0% (pure water) to 40%) on the moisture, bonding, and wind erosion properties of coal dust. Overall, the effectiveness of the molasses increased with their concentration, and it manifested itself in the following way: (1) the molasses improved the anti-evaporation ability of wet coal dust. For example, the evaporation mass of the coal dust wetted using a molasses solution decreased by 82.8%; (2) molasses effectively agglutinated coal dust; (3) molasses can effectively decrease the surface tension and increase the viscosity of the wetting solution. The surface tension of the molasses solution reached 41.37 mN/m and the viscosity increased to 6.79 mPa·s; (4) molasses can significantly suppress the wind erosion of deposited coal dust, with its wind erosion mass decreasing 99.1%; finally, (5) the effectiveness of molasses at suppressing coal dust was discussed at a molecular level. This study highlights the feasibility of a low-cost and environment-friendly dust suppressant in coal mines.

Resistance of multidrug resistant Escherichia coli to environmental nanoscale TiO2 and ZnO.

Excessive production and utilization of nanoparticles (NPs) at industrial and household levels releases substantial quantities of NPs into the environment. These can be harmful to different types of organisms and cause adverse effects on ecosystems. Purchased TiO2 and ZnO NPs were characterized via XRD, XPS, FESEM, and Zeta potential. This study elucidates how multidrug resistant Escherichia coli LM13, which was recovered from livestock manure, counteracts the antibacterial activities of TiO2 and ZnO NPs to survive in the environment. E. coli ATCC25922, which is susceptible to antibiotics, was used as control. A dose-response experiment showed that the antibacterial activity of TiO2 was lower than that of ZnO NPs and, LM13 was more resistant to NPs than ATCC25922. An AcrAB-TolC efflux pump along with its regulation genes helped LM13 to minimize NP toxicity. Flow cytometry findings also indicated that the intensity of the side-scatter light parameter increased with TiO2 and ZnO NPs in a dose dependent manner, suggesting NP uptake by the both strains. The generation of reactive oxygen species in LM13 was several-fold lower than in ATCC25922, suggesting that reactive oxygen species mainly contribute to the toxicity mechanism. These results illustrate the necessity to evaluate the impacts of NPs on the survival capacity of bacteria and on the resistance genes in bacteria with higher NP resistance than NP susceptible bacteria.

A novel duplex SYBR Green real-time PCR with melting curve analysis method for beef adulteration detection.

An efficient and reliable duplex SYBR Green real-time quantitative PCR (qPCR) method for beef products adulteration detection was developed based on bovine specific and vertebrate universal primers. By analyzing the numbers, positions (Tm value) of melting curve peaks of the duplex PCR products, we simultaneously identified bovine and preliminary screened non-bovine in samples, and also semi-quantified the bovine percentage according to the area ratios of peaks. All of these were necessary for adulteration determination. The specific and universal primers were designed based on mitochondrial genes ND4 and 16S rRNA respectively, their amplicons Tm values were 72.6 ± 0.5 °C and 79-81 °C. There might be some other peaks at 74-78 °C and above 81 °C if non-bovine components existed. Thelimit of detectionwas 1 pgforbovineDNA, and1 - 30 pg fornon-bovineDNAbasedon differentspecies.

Instructions for planning emergency shelters and open spaces in China: Lessons from global experiences and expertise.

Emergency shelters and open spaces play dual roles in providing locations for temporary accommodation and rescue activities during disaster situations. Over time, research has attempted to optimize site selection and design for emergency shelters and open spaces, though they rarely offered lessons to guide actual projects. In this regard, it is paramount to design emergency shelters or open spaces in a forward-looking and dynamic manner, especially when the country faces challenges due to extreme events (e.g. earthquake and floods) and large populations. The aim of this paper is to analyze the issues of this field in China while summarizing instructions for future construction based on the experience and expertise of other countries. Specific suggestions include: (1) combining the designs and plans of emergency shelters/open spaces into the construction of a resilient urban system; (2) embedding routine preparedness into disaster risk reduction approaches; (3) optimizing issues in site-selection using spatiotemporal patterns in refuge demand while designing the shelter system into a hierarchical structure; (4) shifting from a top-down approach to a bottom-up approach, which includes the participation of multiple aspects of shelter construction; and (5) designing and establishing emergency shelters/open spaces to fight against different types of disasters.