Protein Assembly by Design.

Proteins are nature's primary building blocks for the construction of sophisticated molecular machines and dynamic materials, ranging from protein complexes such as photosystem II and nitrogenase that drive biogeochemical cycles to cytoskeletal assemblies and muscle fibers for motion. Such natural systems have inspired extensive efforts in the rational design of artificial protein assemblies in the last two decades. As molecular building blocks, proteins are highly complex, in terms of both their three-dimensional structures and chemical compositions. To enable control over the self-assembly of such complex molecules, scientists have devised many creative strategies by combining tools and principles of experimental and computational biophysics, supramolecular chemistry, inorganic chemistry, materials science, and polymer chemistry, among others. Owing to these innovative strategies, what started as a purely structure-building exercise two decades ago has, in short order, led to artificial protein assemblies with unprecedented structures and functions and protein-based materials with unusual properties. Our goal in this review is to give an overview of this exciting and highly interdisciplinary area of research, first outlining the design strategies and tools that have been devised for controlling protein self-assembly, then describing the diverse structures of artificial protein assemblies, and finally highlighting the emergent properties and functions of these assemblies.

Electron delocalization and charge mobility as a function of reduction in a metal-organic framework.

Conductive metal-organic frameworks are an emerging class of three-dimensional architectures with degrees of modularity, synthetic flexibility and structural predictability that are unprecedented in other porous materials. However, engendering long-range charge delocalization and establishing synthetic strategies that are broadly applicable to the diverse range of structures encountered for this class of materials remain challenging. Here, we report the synthesis of K x Fe2(BDP)3 (0 ≤ x ≤ 2; BDP2- = 1,4-benzenedipyrazolate), which exhibits full charge delocalization within the parent framework and charge mobilities comparable to technologically relevant polymers and ceramics. Through a battery of spectroscopic methods, computational techniques and single-microcrystal field-effect transistor measurements, we demonstrate that fractional reduction of Fe2(BDP)3 results in a metal-organic framework that displays a nearly 10,000-fold enhancement in conductivity along a single crystallographic axis. The attainment of such properties in a K x Fe2(BDP)3 field-effect transistor represents the realization of a general synthetic strategy for the creation of new porous conductor-based devices.

Synthetic Approach To Determine the Effect of Nuclear Spin Distance on Electronic Spin Decoherence.

Nuclear-electronic interactions are a fundamental phenomenon which impacts fields from magnetic resonance imaging to quantum information processing (QIP). The realization of QIP would transform diverse areas of research including accurate simulation of quantum dynamics and cryptography. One promising candidate for the smallest unit of QIP, a qubit, is electronic spin. Electronic spins in molecules offer significant advantages with regard to QIP, and for the emerging field of quantum sensing. Yet relative to other qubit candidates, they possess shorter superposition lifetimes, known as coherence times or T2, due to interactions with nuclear spins in the local environment. Designing complexes with sufficiently long values of T2 requires an understanding of precisely how the position of nuclear spins relative to the electronic spin center affects decoherence. Herein, we report the first synthetic study of the relationship between nuclear spin-electron spin distance and decoherence. Through the synthesis of four vanadyl complexes, (Ph4P)2[VO(C3H6S2)2] (1), (Ph4P)2[VO(C5H6S4)2] (2), (Ph4P)2[VO(C7H6S6)2] (3), and (Ph4P)2[VO(C9H6S8)2] (4), we are able to synthetically place a spin-laden propyl moiety at well-defined distances from an electronic spin center by employing a spin-free carbon-sulfur scaffold. We interrogate this series of molecules with pulsed electron paramagnetic resonance (EPR) spectroscopy to determine their coherence times. Our studies demonstrate a sharp jump in T2 when the average V-H distance is decreased from 6.6(6) to 4.0(4) Å, indicating that spin-active nuclei sufficiently close to the electronic spin center do not contribute to decoherence. These results illustrate the power of synthetic chemistry in elucidating the fundamental mechanisms underlying electronic polarization transfer and provide vital principles for the rational design of long-coherence electronic qubits.

Long Coherence Times in Nuclear Spin-Free Vanadyl Qubits.

Quantum information processing (QIP) offers the potential to create new frontiers in fields ranging from quantum biology to cryptography. Two key figures of merit for electronic spin qubits, the smallest units of QIP, are the coherence time (T2), the lifetime of the qubit, and the spin-lattice relaxation time (T1), the thermally defined upper limit of T2. To achieve QIP, processable qubits with long coherence times are required. Recent studies on (Ph4P-d20)2[V(C8S8)3], a vanadium-based qubit, demonstrate that millisecond T2 times are achievable in transition metal complexes with nuclear spin-free environments. Applying these principles to vanadyl complexes offers a route to combine the previously established surface compatibility of the flatter vanadyl structures with a long T2. Toward those ends, we investigated a series of four qubits, (Ph4P)2[VO(C8S8)2] (1), (Ph4P)2[VO(ß-C3S5)2] (2), (Ph4P)2[VO(α-C3S5)2] (3), and (Ph4P)2[VO(C3S4O)2] (4), by pulsed electron paramagnetic resonance (EPR) spectroscopy and compared the performance of these species with our recently reported set of vanadium tris(dithiolene) complexes. Crucially we demonstrate that solutions of 1-4 in SO2, a uniquely polar nuclear spin-free solvent, reveal T2 values of up to 152(6) µs, comparable to the best molecular qubit candidates. Upon transitioning to vanadyl species from the tris(dithiolene) analogues, we observe a remarkable order of magnitude increase in T1, attributed to stronger solute-solvent interactions with the polar vanadium-oxo moiety. Simultaneously, we detect a small decrease in T2 for the vanadyl analogues relative to the tris(dithiolene) complexes. We attribute this decrease to the absence of one nuclear spin-free ligand, which served to shield the vanadium centers against solvent nuclear spins. Our results highlight new design principles for long T1 and T2 times by demonstrating the efficacy of ligand-based tuning of solute-solvent interactions.

Electronic Conductivity, Ferrimagnetic Ordering, and Reductive Insertion Mediated by Organic Mixed-Valence in a Ferric Semiquinoid Metal-Organic Framework.

A three-dimensional network solid composed of Fe(III) centers and paramagnetic semiquinoid linkers, (NBu4)2Fe(III)2(dhbq)3 (dhbq(2-/3-) = 2,5-dioxidobenzoquinone/1,2-dioxido-4,5-semiquinone), is shown to exhibit a conductivity of 0.16 ± 0.01 S/cm at 298 K, one of the highest values yet observed for a metal-organic framework (MOF). The origin of this electronic conductivity is determined to be ligand mixed-valency, which is characterized using a suite of spectroscopic techniques, slow-scan cyclic voltammetry, and variable-temperature conductivity and magnetic susceptibility measurements. Importantly, UV-vis-NIR diffuse reflectance measurements reveal the first observation of Robin-Day Class II/III mixed valency in a MOF. Pursuit of stoichiometric control over the ligand redox states resulted in synthesis of the reduced framework material Na0.9(NBu4)1.8Fe(III)2(dhbq)3. Differences in electronic conductivity and magnetic ordering temperature between the two compounds are investigated and correlated to the relative ratio of the two different ligand redox states. Overall, the transition metal-semiquinoid system is established as a particularly promising scaffold for achieving tunable long-range electronic communication in MOFs.

Lithographic deposition of patterned metal-organic framework coatings using a photobase generator.

A photobase generator was used to induce metal-organic framework (MOF) nucleation upon UV irradiation. This method was further developed into a simple, one-step method for depositing patterned MOF films. Furthermore, the ability of our method to coat a single substrate with MOF films having different chemical compositions is illustrated. The method is an important step towards integrating MOF deposition with existing lithographic techniques and the incorporation of these materials into sensors and other electronic devices.

Metal-hydrogen-pi-bonded organic frameworks.

We report the synthesis and characterization of a new series of permanently porous, three-dimensional metal-organic frameworks (MOFs), M-HAF-2 (M = Fe, Ga, or In), constructed from tetratopic, hydroxamate-based, chelating linkers. The structure of M-HAF-2 was determined by three-dimensional electron diffraction (3D ED), revealing a unique interpenetrated hcb-a net topology. This unusual topology is enabled by the presence of free hydroxamic acid groups, which lead to the formation of a diverse network of cooperative interactions comprising metal-hydroxamate coordination interactions at single metal nodes, staggered π-π interactions between linkers, and H-bonding interactions between metal-coordinated and free hydroxamate groups. Such extensive, multimodal interconnectivity is reminiscent of the complex, noncovalent interaction networks of proteins and endows M-HAF-2 frameworks with high thermal and chemical stability and allows them to readily undergo postsynthetic metal ion exchange (PSE) between trivalent metal ions. We demonstrate that M-HAF-2 can serve as versatile porous materials for ionic separations, aided by one-dimensional channels lined by continuously π-stacked aromatic groups and H-bonding hydroxamate functionalities. As an addition to the small group of hydroxamic acid-based MOFs, M-HAF-2 represents a structural merger between MOFs and hydrogen-bonded organic frameworks (HOFs) and illustrates the utility of non-canonical metal-coordinating functionalities in the discovery of new bonding and topological patterns in reticular materials.

A Molecular Approach to Quantum Sensing.

The second quantum revolution hinges on the creation of materials that unite atomic structural precision with electronic and structural tunability. A molecular approach to quantum information science (QIS) promises to enable the bottom-up creation of quantum systems. Within the broad reach of QIS, which spans fields ranging from quantum computation to quantum communication, we will focus on quantum sensing. Quantum sensing harnesses quantum control to interrogate the world around us. A broadly applicable class of quantum sensors would feature adaptable environmental compatibility, control over distance from the target analyte, and a tunable energy range of interaction. Molecules enable customizable "designer" quantum sensors with tunable functionality and compatibility across a range of environments. These capabilities offer the potential to bring unmatched sensitivity and spatial resolution to address a wide range of sensing tasks from the characterization of dynamic biological processes to the detection of emergent phenomena in condensed matter. In this Outlook, we outline the concepts and design criteria central to quantum sensors and look toward the next generation of designer quantum sensors based on new classes of molecular sensors.

A concentrated array of copper porphyrin candidate qubits.

Synthetic chemistry offers a pathway to realize atomically precise arrays of qubits, the smallest unit of a quantum information science system. We harnessed framework chemistry to create an array of qubit candidates, featuring one qubit every 13.6 Å, by synthesizing the new copper(ii) variant of the porphyrinic metal-organic framework PCN-224. We subjected the framework to pulse-electron paramagnetic resonance (EPR) measurements, establishing spin coherence at temperatures up to 80 K within a fully spin concentrated framework. Observation of Rabi oscillations further support the viability of the qubits within these arrays. To interrogate the spin dynamics of qubit arrays, we investigated spin-lattice relaxation, T 1, through a combination of pulse-EPR and alternating current (ac) magnetic susceptibility measurements. These data revealed distinct vibrational environments within the frameworks that contribute to spin dynamics. The aggregate results establish a pathway for a synthetic approach to create spatially precise networks of qubits.