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1.
J Am Chem Soc ; 146(18): 12864-12876, 2024 May 08.
Artigo em Inglês | MEDLINE | ID: mdl-38670931

RESUMO

Deep-ultraviolet (DUV) light sources are technologically highly important, but DUV light-emitting materials are extremely rare; AlN and its alloys are the only materials known so far, significantly limiting the chemical and structural spaces for materials design. Here, we perform a high-throughput computational search for DUV light emitters based on a set of carefully designed screening criteria relating to the sophisticated electronic structure. In this way, we successfully identify 5 promising material candidates that exhibit comparable or higher radiative recombination coefficients than AlN, including BeGeN2, Mg3NF3, KCaBr3, KHS, and RbHS. Further, we unveil the unique features in the atomic and electronic structures of DUV light emitters and elucidate the fundamental genetic reasons why DUV light emitters are extremely rare. Our study not only guides the design and synthesis of efficient DUV light emitters but also establishes the genetic nature of ultrawide-band-gap semiconductors in general.

2.
Int J Colorectal Dis ; 39(1): 38, 2024 Mar 16.
Artigo em Inglês | MEDLINE | ID: mdl-38492080

RESUMO

PURPOSE: Total neoadjuvant therapy (TNT) has emerged as a therapeutic approach for locally advanced rectal cancer (LARC). However, the optimal chemotherapy cycles within TNT remain uncertain. This study aimed to evaluate and compare the prognostic efficacy of varying cycles of chemotherapy during TNT for LARC. METHODS: Patients diagnosed with LARC (T3-4N0M0/T1-4N1-2M0), who underwent TNT or chemoradiotherapy followed by total mesorectal excision (TME) between 2015 and 2020, were retrospective included. Patients were categorized into three groups based on their neoadjuvant strategy: CRT (long-course chemoradiotherapy), STNT (long-course CRT with one to three cycles of chemotherapy), and LTNT (long-course CRT with four or more cycles of chemotherapy). Propensity score matching (PSM) based on gender, age, body mass index, tumor distance from the anal verge, clinical T stage, clinical N stage, and mesorectal fascia status was employed to reduce confounding bias. Primary endpoints were disease-free survival (DFS) and metastasis-free survival (MFS). RESULTS: The study comprised 372 patients, with 73 patients in each group after PSM. Compared with CRT, both STNT and LTNT demonstrated improved DFS (5-year rate: 59.7% vs. 77.8% vs. 76.5%, p = 0.027) and MFS (5-year rate: 65.1% vs. 81.3% vs. 81.4%, p = 0.030). There was no difference in DFS or MFS between STNT and LTNT. These favorable outcomes were consistent among subgroups defined by tumor distance from the anal verge ≥ 5 cm, clinical T3 stage, clinical N positive status, or involved mesorectal fascia. CONCLUSION: Compared to CRT, both STNT and LTNT demonstrated improved DFS and MFS outcomes. Notably, survival outcomes were similar between STNT and LTNT, suggesting that chemotherapy cycles in TNT may not significantly impact survival.


Assuntos
Segunda Neoplasia Primária , Neoplasias Retais , Humanos , Terapia Neoadjuvante , Resultado do Tratamento , Estudos Retrospectivos , Pontuação de Propensão , Estadiamento de Neoplasias , Neoplasias Retais/patologia , Intervalo Livre de Doença , Quimiorradioterapia , Segunda Neoplasia Primária/patologia , Protocolos de Quimioterapia Combinada Antineoplásica/uso terapêutico
3.
Plant Physiol ; 188(2): 1277-1293, 2022 02 04.
Artigo em Inglês | MEDLINE | ID: mdl-34730802

RESUMO

Soybean mosaic virus (SMV) is a severe soybean (Glycine max) pathogen. Here we characterize a soybean SMV resistance cluster (SRC) that comprises five resistance (R) genes. SRC1 encodes a Toll/interleukin-1 receptor and nucleotide-binding site (TIR-NBS [TN]) protein, SRC4 and SRC6 encode TIR proteins with a short EF-hand domain, while SRC7 and SRC8 encode TNX proteins with a noncanonical basic secretory protein (BSP) domain at their C-termini. We mainly studied SRC7, which contains a noncanonical BSP domain and gave full resistance to SMV. SRC7 possessed broad-spectrum antiviral activity toward several plant viruses including SMV, plum pox virus, potato virus Y, and tobacco mosaic virus. The TIR domain alone was both necessary and sufficient for SRC7 immune signaling, while the NBS domain enhanced its activity. Nuclear oligomerization via the interactions of both TIR and NBS domains was essential for SRC7 function. SRC7 expression was transcriptionally inducible by SMV infection and salicylic acid (SA) treatment, and SA was required for SRC7 triggered virus resistance. SRC7 expression was posttranscriptionally regulated by miR1510a and miR2109, and the SRC7-miR1510a/miR2109 regulatory network appeared to contribute to SMV-soybean interactions in both resistant and susceptible soybean cultivars. In summary, we report a soybean R gene cluster centered by SRC7 that is regulated at both transcriptional and posttranscriptional levels, possesses a yet uncharacterized BSP domain, and has broad-spectrum antiviral activities. The SRC cluster is special as it harbors several functional R genes encoding atypical TIR-NBS-LRR (TNL) type R proteins, highlighting its importance in SMV-soybean interaction and plant immunity.


Assuntos
Resistência à Doença/genética , Glycine max/genética , Glycine max/virologia , Família Multigênica , Potyvirus/patogenicidade , Produtos Agrícolas/genética , Produtos Agrícolas/virologia , Regulação da Expressão Gênica de Plantas , Genes de Plantas , Variação Genética , Genótipo
4.
Plant Physiol ; 185(2): 424-440, 2021 03 15.
Artigo em Inglês | MEDLINE | ID: mdl-33721890

RESUMO

Orobanche cumana is a holoparasitic plant that attaches to host-plant roots and seriously reduces the yield of sunflower (Helianthus annuus L.). Effective control methods are lacking with only a few known sources of genetic resistance. In this study, a seed-soak agroinoculation (SSA) method was established, and recombinant tobacco rattle virus vectors were constructed to express RNA interference (RNAi) inducers to cause virus-induced gene silencing (VIGS) in sunflower. A host target gene HaTubulin was systemically silenced in both leaf and root tissues by the SSA-VIGS approach. Trans-species silencing of O. cumana genes were confirmed for 10 out of 11 target genes with silencing efficiency of 23.43%-92.67%. Knockdown of target OcQR1, OcCKX5, and OcWRI1 genes reduced the haustoria number, and silencing of OcEXPA6 caused further phenotypic abnormalities such as shorter tubercles and necrosis. Overexpression of OcEXPA6 caused retarded root growth in alfalfa (Medicago sativa). The results demonstrate that these genes play an important role in the processes of O. cumana parasitism. High-throughput small RNA (sRNA) sequencing and bioinformatics analyses unveiled the distinct features of target gene-derived siRNAs in O. cumana such as siRNA transitivity, strand polarity, hotspot region, and 21/22-nt siRNA predominance, the latter of which was confirmed by Northern blot experiments. The possible RNAi mechanism is also discussed by analyzing RNAi machinery genes in O. cumana. Taken together, we established an efficient host-induced gene silencing technology for both functional genetics studies and potential control of O. cumana. The ease and effectiveness of this strategy could potentially be useful for other species provided they are amenable to SSA.


Assuntos
Resistência à Doença/genética , Helianthus/genética , Orobanche/fisiologia , Doenças das Plantas/imunologia , Proteínas de Plantas/genética , Biologia Computacional , Expressão Gênica , Inativação Gênica , Helianthus/imunologia , Sequenciamento de Nucleotídeos em Larga Escala , Medicago sativa/genética , Medicago sativa/crescimento & desenvolvimento , Necrose , Orobanche/genética , Folhas de Planta/genética , Folhas de Planta/imunologia , Raízes de Plantas/genética , Raízes de Plantas/imunologia , Vírus de Plantas/genética , Interferência de RNA , Sementes/genética , Sementes/imunologia , Análise de Sequência de RNA , Tubulina (Proteína)/genética
5.
Cereb Cortex ; 31(8): 3911-3924, 2021 07 05.
Artigo em Inglês | MEDLINE | ID: mdl-33791755

RESUMO

Precise regulation of embryonic neurodevelopment is crucial for proper structural organization and functioning of the adult brain. The key molecular machinery orchestrating this process remains unclear. Anaplastic lymphoma kinase (ALK) is an oncogenic receptor-type protein tyrosine kinase that is specifically and transiently expressed in developing nervous system. However, its role in the mammalian brain development is unknown. We found that transient embryonic ALK inactivation caused long-lasting abnormalities in the adult mouse brain, including impaired neuronal connectivity and cognition, along with delayed neuronal migration and decreased neuronal proliferation during neurodevelopment. scRNA-seq on human cerebral organoids revealed a delayed transition of cell-type composition. Molecular characterization identified a group of differentially expressed genes (DEGs) that were temporally regulated by ALK at distinct developmental stages. In addition to oncogenes, many DEGs found by scRNA-seq are associated with neurological or neuropsychiatric disorders. Our study demonstrates a pivotal role of oncogenic ALK pathway in neurodevelopment and characterized cell-type-specific transcriptome regulated by ALK for better understanding mammalian cortical development.


Assuntos
Quinase do Linfoma Anaplásico/genética , Córtex Cerebral/crescimento & desenvolvimento , Transdução de Sinais/genética , Transcriptoma , Quinase do Linfoma Anaplásico/antagonistas & inibidores , Animais , Feminino , Regulação da Expressão Gênica no Desenvolvimento/genética , Humanos , Imageamento por Ressonância Magnética , Camundongos , Doenças do Sistema Nervoso/genética , Células-Tronco Neurais , Neurogênese , Oncogenes/genética , Gravidez , RNA-Seq
6.
Sheng Li Xue Bao ; 74(4): 657-668, 2022 Aug 25.
Artigo em Zh | MEDLINE | ID: mdl-35993217

RESUMO

Neural oscillations reflect synchronized activities of neuronal ensembles in central nervous system. In the hippocampus, thalamus, neocortex and other brain subregions, neural oscillation can be detected and plays a crucial role in many complicated cognitive processes. Decoupling and damaging of neural oscillation play a key role in the induction of severe cognition deficits in many psychiatric disorders. In this review, we summarize research advances in the underlying mechanisms and physiological functions of neural oscillations. We also discuss the abnormal changes of sharp wave-ripple, gamma oscillation and sleep spindle oscillation in major depressive disorder, schizophrenia and Alzheimer's disease, etc. Finally, the application potential of neural oscillations as clinical diagnosis and treatment targets is evaluated and prospected.


Assuntos
Transtorno Depressivo Maior , Hipocampo/fisiologia , Humanos , Neurônios , Sono/fisiologia
7.
Angew Chem Int Ed Engl ; 61(46): e202212671, 2022 11 14.
Artigo em Inglês | MEDLINE | ID: mdl-36149752

RESUMO

Compared with conventional closed-shell fluorophores, radical cations provide an opportunity for development of red-to-NIR fluorophores with small sizes and easy preparation. However, most radical cations reported in the literature suffer from poor stability in water solution and are almost non-emissive. To tackle this challenge, we herein develop a deep-red-emissive and water-stable pyrrole radical cation P⋅+ -DPA-Zn, which can be easily generated from P-DPA-Zn by air oxidation. The deep-red-emissive P⋅+ -DPA-Zn can be used for imaging-guided mitochondria-targeted delivery of Zn2+ into cancer cells to promote mutant p53 proteins degradation and abrogate mutp53-manifested gain of function, including reduced chemotherapy resistance, inhibited cancer cell migration, decreased tumor cell colony and sphere formation. The water-stable and deep-red emissive pyrrole radical cation is thus promising for cancer theranostic applications.


Assuntos
Neoplasias , Água , Humanos , Água/metabolismo , Proteína Supressora de Tumor p53/metabolismo , Proteínas Mutantes/metabolismo , Neoplasias/tratamento farmacológico , Neoplasias/patologia , Cátions/metabolismo , Pirróis
8.
Plant Biotechnol J ; 19(7): 1370-1385, 2021 07.
Artigo em Inglês | MEDLINE | ID: mdl-33484609

RESUMO

Host-induced gene silencing (HIGS) emerged as a new strategy for pest control. However, RNAi efficiency is reported to be low in Lepidoptera, which are composed of many important crop pests. To address this, we generated transgenic plants to develop HIGS effects in a maize pest, Mythimna separata (Lepidoptera, Noctuidae), by targeting chitinase encoding genes. More importantly, we developed an artificial microRNA (amiR) based PTA (polycistronic-tRNA-amiR) system for silencing multiple target genes. Compared with hpRNA (hairpin RNA), transgenic expression of a PTA cassette including an amiR for the gut-specific dsRNA nuclease gene MsREase, resulted in improved knockdown efficiency and caused more pronounced developmental abnormalities in recipient insects. When target gene siRNAs were analysed after HIGS and direct dsRNA/siRNA feeding, common features such as sense polarity and siRNA hotspot regions were observed, however, they differed in siRNA transitivity and major 20-24nt siRNA species. Core RNAi genes were identified in M. separata, and biochemical activities of MsAGO2, MsSID1 and MsDcr2 were confirmed by EMSA (electrophoretic mobility shift assay) and dsRNA cleavage assays, respectively. Taken together, we provide compelling evidence for the existence of the RNAi mechanism in M. separata by analysis of both siRNA signatures and RNAi machinery components, and the PTA system could potentially be useful for future RNAi control of lepidopteran pests.


Assuntos
Mariposas , Animais , Inativação Gênica , Mariposas/genética , Interferência de RNA , RNA de Cadeia Dupla , RNA de Transferência
9.
J Cell Mol Med ; 24(24): 14325-14338, 2020 12.
Artigo em Inglês | MEDLINE | ID: mdl-33124146

RESUMO

CD4+ T cells differentiate into distinct functional effector and inhibitory subsets are facilitated by distinct cytokine cues present at the time of antigen recognition. Maintaining a balance between T helper 17 (Th17) and regulatory T (Treg) cells are critical for the control of the immunopathogenesis of liver diseases. Here, by using the mouse model of helminth Schistosoma japonicum (S japonicum) infection, we show that the hepatic mRNA levels of P21-activated kinase 1 (PAK1), a key regulator of the actin cytoskeleton, adhesion and cell motility, are significantly increased and associated with the development of liver pathology during S japonicum infection. In addition, PAK1-deficient mice are prone to suppression of Th17 cell responses but increased Treg cells. Furthermore, PAK1 enhances macrophage activation through promoting IRF1 nuclear translocation in an NF-κB-dependent pathway, resulting in promoting Th17 cell differentiation through inducing IL-6 production. These findings highlight the importance of PAK1 in macrophages fate determination and suggest that PAK1/IRF1 axis-dependent immunomodulation can ameliorate certain T cell-based immune pathologies.


Assuntos
Helmintíase/metabolismo , Helmintíase/parasitologia , Macrófagos/imunologia , Macrófagos/metabolismo , Células Th17/imunologia , Células Th17/metabolismo , Quinases Ativadas por p21/metabolismo , Animais , Antígenos de Helmintos/imunologia , Biomarcadores , Citocinas/metabolismo , Modelos Animais de Doenças , Imunofenotipagem , Camundongos , Esquistossomose Japônica/imunologia , Esquistossomose Japônica/metabolismo , Esquistossomose Japônica/parasitologia , Subpopulações de Linfócitos T/imunologia , Subpopulações de Linfócitos T/metabolismo
10.
Hum Mol Genet ; 26(5): 955-968, 2017 03 01.
Artigo em Inglês | MEDLINE | ID: mdl-28073926

RESUMO

Renpenning syndrome is a group of X-linked intellectual disability syndromes caused by mutations in human polyglutamine-binding protein 1 (PQBP1) gene. Little is known about the molecular pathogenesis of the various mutations that cause the notable variability in patients. In this study, we examine the cellular and synaptic functions of the most common mutations found in the patients: c.461_462delAG, c.459_462delAGAG and c.463_464dupAG in an AG hexamer in PQBP1 exon 4. We discovered that PQBP1 c.459_462delAGAG and c.463_464dupAG mutations encode a new C-terminal epitope that preferentially binds non-phosphorylated fragile X mental retardation protein (FMRP) and promotes its ubiquitin-mediated degradation. Impairment of FMRP function up-regulates its targets such as MAP1B, and disrupts FMRP-dependent synaptic scaling in primary cultured neurons. In Drosophila neuromuscular junction model, PQBP1 c.463_464dupAG transgenic flies showed remarkable defects of synaptic over-growth, which can be rescued by exogenously expressing dFMRP. Our data strongly support a gain-of-function pathogenic mechanism of PQBP1 c.459_462delAGAG and c.463_464dupAG mutations, and suggest that therapeutic strategies to restore FMRP function may be beneficial for those patients.


Assuntos
Proteínas de Transporte/genética , Paralisia Cerebral/genética , Proteína do X Frágil da Deficiência Intelectual/genética , Deficiência Intelectual/genética , Deficiência Intelectual Ligada ao Cromossomo X/genética , Proteínas Nucleares/genética , Animais , Animais Geneticamente Modificados , Proteínas de Transporte/biossíntese , Paralisia Cerebral/metabolismo , Paralisia Cerebral/patologia , Proteínas de Ligação a DNA , Modelos Animais de Doenças , Drosophila/genética , Epitopos/genética , Epitopos/imunologia , Proteína do X Frágil da Deficiência Intelectual/biossíntese , Humanos , Deficiência Intelectual/imunologia , Deficiência Intelectual/patologia , Deficiência Intelectual Ligada ao Cromossomo X/metabolismo , Deficiência Intelectual Ligada ao Cromossomo X/patologia , Proteínas Associadas aos Microtúbulos/genética , Mutação , Junção Neuromuscular , Proteínas Nucleares/biossíntese , Peptídeos/genética , Proteólise , Ubiquitina/genética
11.
Neurochem Res ; 44(3): 683-691, 2019 Mar.
Artigo em Inglês | MEDLINE | ID: mdl-29052089

RESUMO

Abnormal processing of amyloid precursor protein (APP) and aggregation of the Aß peptide are known to play a key role in the pathogenesis of Alzheimer disease, but the function of endogenous APP under normal physiological conditions remains poorly understood. In this study, we investigated presynaptic changes in APP knockout (KO) mice. We demonstrate that both sucrose-induced neurotransmission and synaptic depletion in response to high frequency stimulation are significantly enhanced in APP KO compared to wild type littermates. In addition, the level of phosphorylated forms of synapsins, but not total synapsins, is elevated in the KO mice. Furthermore, we show that the inhibition of L-type calcium channels normalizes phosphorylated synapsins and slows down the high frequency induced synaptic depletion in APP KO mice. These results suggest a new mechanism by which APP regulates synaptic vesicle dynamics through synapsin-dependent phosphorylation.


Assuntos
Precursor de Proteína beta-Amiloide/metabolismo , Fosforilação/fisiologia , Sinapsinas/metabolismo , Vesículas Sinápticas/metabolismo , Animais , Camundongos Knockout , Neurotransmissores/farmacologia , Sinapsinas/efeitos dos fármacos , Transmissão Sináptica/efeitos dos fármacos , Transmissão Sináptica/fisiologia , Vesículas Sinápticas/efeitos dos fármacos
12.
Biochem J ; 460(3): 387-97, 2014 Jun 15.
Artigo em Inglês | MEDLINE | ID: mdl-24707933

RESUMO

Htz1 (histone 2A Z1) deposition at promoters is involved in the transcriptional activation of quiescent genes. Chz1 [chaperone for Htz1 (or H2A)-H2B dimer] is an Htz1-H2B-specific chaperone that delivers histone H2A.Z that substitutes for H2A. Spt16 (suppressor of Ty) functions in transcription elongation and also possesses a histone chaperone activity. However, the links among Chz1, Htz1 and Spt16 remain unknown. In the present study, we determined the genomic binding profiling of Htz1, Pol II (RNA polymerase II) and Spt16 using ChIP microarray experiments and sequenced nucleosomal DNA using a next-generation sequencing technique in wild-type and chz1-deletion strains of Saccharomyces cerevisiae. The results of the present study revealed that Spt16 and Pol II are associated, bind at nucleosome-depleted regions, and are positively correlated with the transcription rate. Importantly, Spt16 disfavours the Htz1-bound genes, and this discrimination is impaired upon the deletion of chz1. The negative correlation between the binding profiles of Spt16 and Htz1 at promoters is not an intrinsic repulsion, but is probably due to a requirement for transcription initiation. We showed that chz1 deletion decreases Htz1 binding at promoters and telomeres. Also, in the chz1-deletion mutant, Spt16 binding at ribosomal genes was lost. The results of the present study suggest that the discrimination of Spt16 to Htz1-bound genes is due to the priority of Chz1 over Spt16 in binding to the Htz1-bound genomic regions. Chz1-escorted Htz1 therefore impairs Spt16 binding at chromatin.


Assuntos
Chaperonas de Histonas/genética , Histonas/metabolismo , Nucleossomos/metabolismo , Proteínas de Saccharomyces cerevisiae/genética , Proteínas de Saccharomyces cerevisiae/metabolismo , Fatores de Elongação da Transcrição/genética , Cromatina/metabolismo , Chaperonas de Histonas/deficiência , RNA Polimerase II/metabolismo , Saccharomyces cerevisiae/genética , Transcrição Gênica , Fatores de Elongação da Transcrição/metabolismo
13.
J Neurosci ; 33(39): 15545-54, 2013 Sep 25.
Artigo em Inglês | MEDLINE | ID: mdl-24068821

RESUMO

Sleep is an essential and evolutionarily conserved behavior that is closely related to synaptic function. However, whether neuroligins (Nlgs), which are cell adhesion molecules involved in synapse formation and synaptic transmission, are involved in sleep is not clear. Here, we show that Drosophila Nlg4 (DNlg4) is highly expressed in large ventral lateral clock neurons (l-LNvs) and that l-LNv-derived DNlg4 is essential for sleep regulation. GABA transmission is impaired in mutant l-LNv, and sleep defects in dnlg4 mutant flies can be rescued by genetic manipulation of GABA transmission. Furthermore, dnlg4 mutant flies exhibit a severe reduction in GABAA receptor RDL clustering, and DNlg4 associates with RDLs in vivo. These results demonstrate that DNlg4 regulates sleep through modulating GABA transmission in l-LNvs, which provides the first known link between a synaptic adhesion molecule and sleep in Drosophila.


Assuntos
Moléculas de Adesão Celular Neuronais/metabolismo , Proteínas de Drosophila/metabolismo , Drosophila/fisiologia , Sono , Transmissão Sináptica , Ácido gama-Aminobutírico/metabolismo , Animais , Moléculas de Adesão Celular Neuronais/genética , Drosophila/metabolismo , Proteínas de Drosophila/genética , Neurônios/metabolismo , Neurônios/fisiologia , Receptores de GABA-A/metabolismo
14.
Plants (Basel) ; 13(5)2024 Feb 28.
Artigo em Inglês | MEDLINE | ID: mdl-38475513

RESUMO

The recognition of pathogen effectors through the nucleotide-binding leucine-rich repeat receptor (NLR) family is an important component of plant immunity. In addition to typical domains such as TIR, CC, NBS, and LRR, NLR proteins also contain some atypical integrated domains (IDs), the roles of which are rarely investigated. Here, we carefully screened the soybean (Glycine max) genome and identified the IDs that appeared in the soybean TNL-like proteins. Our results show that multiple IDs (36) are widely present in soybean TNL-like proteins. A total of 27 Gm-TNL-ID genes (soybean TNL-like gene encoding ID) were cloned and their antiviral activity towards the soybean mosaic virus (SMV)/tobacco mosaic virus (TMV) was verified. Two resistance (R) genes, SRA2 (SMV resistance gene contains AAA_22 domain) and SRZ4 (SMV resistance gene contains zf-RVT domain), were identified to possess broad-spectrum resistance characteristics towards six viruses including SMV, TMV, plum pox virus (PPV), cabbage leaf curl virus (CaLCuV), barley stripe mosaic virus (BSMV), and tobacco rattle virus (TRV). The effects of Gm-TNL-IDX (the domain of the Gm-TNL-ID gene after the TN domain) on the antiviral activity of a R protein SRC7TN (we previously reported the TN domain of the soybean broad-spectrum resistance gene SRC7) were validated, and most of Gm-TNL-IDX inhibits antiviral activity mediated by SRC7TN, possibly through intramolecular interactions. Yeast-two-hybrid (Y2H) and bimolecular fluorescence complementation (BiFC) assays showed that seven Gm-TNL-IDX interacted with SMV-component proteins. Truncation analysis on a broad-spectrum antiviral protein SRZ4 indicated that SRZ4TIR is sufficient to mediate antiviral activity against SMV. Soybean cDNA library screening on SRZ4 identified 48 interacting proteins. In summary, our results indicate that the integration of IDs in soybean is widespread and frequent. The NLR-ID toolkit we provide is expected to be valuable for elucidating the functions of atypical NLR proteins in the plant immune system and lay the foundation for the development of engineering NLR for plant-disease control in the future.

15.
Eur J Transl Myol ; 34(1)2024 Feb 19.
Artigo em Inglês | MEDLINE | ID: mdl-38372644

RESUMO

Neonatal respiratory distress syndrome (NRDS) is one of the major causes of pre-term mortality and morbidity among very-low-birth-weight infants (VLBWI) in low- and middle-income countries (LMIC). Some of the neonates pass away despite admission and care in intensive care units (ICUs). The present clinical trial seeks the application value of elevating oxygen saturation in the brain cells of pre-term neonates born with NRDS. Near-infrared spectroscopy (NIRS) was used to monitor the neonates' microscopic cerebral oxygenation levels do determine hemoglobin concentration in brain tissues, whereas the pulse oximetry was used to measure oxygenation levels among the patients. In statistical analyses, the Analysis of Variance (ANOVA), and descriptive statistics was deployed in the Jupyter Notebook environment using Python language. High saturation of oxygen in the brain tissues result in important biological and physiological processes, including enhanced oxygen supply to cells, reduced severity of NRDS, and balancing oxygen demand and supply. The correlations of oxygen saturation with systemic saturation of oxygen, the saturation of oxygen in brain tissues, the association between brain-specific and systemic saturation, and the impact of these outcomes on clinical practices were deliberated. Also, the pH gas values, the saturation of oxygen in neonates' brain tissues, metabolic acidosis, the effect of acid-base balance and cerebral oxygen supply, and the oxygenation of brain tissues and the pH values emerged as important variables of oxygenation of brain tissues in pre-term neonates. Oxygen saturation in brain cells influence vital physiological and biological processes. Balancing acid-base saturation or levels is needed despite the challenging achievement. Oxygenation of brain tissues improve the brain's overall functioning.

16.
Biochem Biophys Res Commun ; 438(4): 746-52, 2013 Sep 06.
Artigo em Inglês | MEDLINE | ID: mdl-23911609

RESUMO

In Saccharomyces cerevisiae, subtelomeric silencing is involved in the propagation of Silent Information Regulator (SIR) proteins toward euchromatin. Numerous mechanisms are involved in antagonizing the local spread of Sir-dependent silent chromatin into neighboring euchromatin. Here, we identified a novel role for sumoylation E3 ligase Mms21 in the maintenance of subtelomeric silencing. We found that disruption of E3 ligase activity of Mms21 results in the de-repression of subtelomeric silencing. Deletion of E3 ligase domain of Mms21 led to decreased binding of Sir2p, Sir3p and Sir4 at subtelomeric chromatins and increased H3K4 tri-methylation at telomere-distal euchromatin regions, correlating with increased gene expression in two subtelomeric reporter genes. In addition, a mms21Δsl mutant caused a severe growth defect in combination with htz1Δ deletion and showed an enhanced association of Htz1 with telomere proximal regions. Taken together, our findings suggest an important role of Mms21p; it contributes to subtelomeric silencing during the formation of a heterochromatin boundary.


Assuntos
Regulação Fúngica da Expressão Gênica , Proteína SUMO-1/metabolismo , Proteínas de Saccharomyces cerevisiae/metabolismo , Saccharomyces cerevisiae/genética , Proteínas Reguladoras de Informação Silenciosa de Saccharomyces cerevisiae/metabolismo , Telômero/metabolismo , Ubiquitina-Proteína Ligases/metabolismo , Sequência de Aminoácidos , Inativação Gênica , Histonas/metabolismo , Metilação , Ligação Proteica , Proteína SUMO-1/genética , Saccharomyces cerevisiae/metabolismo , Proteínas de Saccharomyces cerevisiae/genética , Deleção de Sequência , Telômero/genética , Ubiquitina-Proteína Ligases/genética
17.
J Neurosci ; 31(3): 819-33, 2011 Jan 19.
Artigo em Inglês | MEDLINE | ID: mdl-21248105

RESUMO

The GluA2 (GluR2) subunit is critical for the regulation of AMPA receptor properties and synaptic plasticity, but the underlying mechanisms remain unclear. Here, we demonstrate that GluA2 regulates metabotropic glutamate receptor-dependent long-term depression (mGluR-LTD) through a previously unknown mechanism involving N-cadherin-dependent and cofilin-mediated actin reorganization. We show that GluA2 is indispensable for mGluR-LTD in the hippocampus, and surprisingly this action of GluA2 is mediated by its extracellular domain interaction with N-cadherin. Accordingly, we show that the function of N-cadherin is regulated by and required for mGluR-LTD. Furthermore, we show that the regulatory effect of GluA2/N-cadherin is mediated through activation of Rho GTPase Rac1 and its downstream actin regulator cofilin, and, importantly, the requirement for GluA2/N-cadherin can be overcome by manipulating cofilin. These results provide compelling evidence that the extracellular domain of GluA2 regulates long-lasting synaptic plasticity through a signaling mechanism that is distinct from those used by the other domains of the receptor subunit.


Assuntos
Actinas/metabolismo , Caderinas/metabolismo , Cofilina 1/metabolismo , Depressão Sináptica de Longo Prazo/fisiologia , Receptores de AMPA/metabolismo , Receptores de Glutamato Metabotrópico/metabolismo , Animais , Western Blotting , Região CA1 Hipocampal/citologia , Região CA1 Hipocampal/fisiologia , Células Cultivadas , Eletrofisiologia , Camundongos , Camundongos Transgênicos , Neurônios/citologia , Neurônios/metabolismo
18.
STAR Protoc ; 3(1): 101112, 2022 03 18.
Artigo em Inglês | MEDLINE | ID: mdl-35098164

RESUMO

Neurotrophic factors and their signaling cascades play important roles in synaptic growth, which can be investigated in cultured primary neurons to better control the concentrations and timing of neurotrophic factor treatment. Here, we provide a protocol detailing the preparation of cultured primary mouse neurons and the neurotrophic factor treatment. We then describe electrophysiological recording of synaptic transmission, immunocytochemistry of AMPA receptor expression, and imaging analysis of dendritic spines. This platform enables characterization of synaptic growth at functional and morphological levels. For complete details on the use and execution of this profile, please refer to Zhou et al. (2021).


Assuntos
Divisão Celular/fisiologia , Fatores de Crescimento Neural/fisiologia , Neurônios/citologia , Sinapses , Animais , Células Cultivadas , Camundongos , Neurônios/metabolismo , Receptores de AMPA/metabolismo
19.
Mol Plant Pathol ; 23(6): 901-908, 2022 06.
Artigo em Inglês | MEDLINE | ID: mdl-35393767

RESUMO

Potato virus Y (PVY) is an important pathogen of potato (Solanum tuberosum). Although the PBS1-RPS5 immune system is well documented in Arabidopsis thaliana, it has not been reported in potato. In Arabidopsis, the bacterial effector AvrPphB cleaves AtPBS1 to trigger an immune response. Here, we show that the AvrPphB-triggered immune response is mediated by StPBS1, a close homologue of AtPBS1 in potato. However, downstream signalling of StPBS1 was mediated by unknown resistance (R) proteins other than potato orthologues of AtRPS5 and HvPBR1, which is important for HvPBS1 signalling in barley. Immune signalling of StPBS1 is mediated by the AvrPphB C-terminal cleavage domain and an STKPQ motif, in contrast to AtPBS1-mediated immunity in which both AvrPphB cleavage fragments and an SEMPH motif are essential. The cleavage sequence of AvrPphB in StPBS1 was replaced with that of the PVY NIa-Pro protease to obtain StPBS1NIa . StPBS1NIa overexpression potato displayed stronger immunity to PVY infection than did the StPBS1 transgenic lines. StPBS1NIa was cleaved at the expected target site by NIa-Pro protease from PVY. Thus, we characterized the function of StPBS1 in potato immunity and provide a biotechnology control method for PVY via transformation of decoy-engineered StPBS1NIa .


Assuntos
Arabidopsis , Potyvirus , Solanum tuberosum , Viroses , Peptídeo Hidrolases/metabolismo , Doenças das Plantas , Potyvirus/metabolismo
20.
J Med Chem ; 65(23): 15738-15748, 2022 12 08.
Artigo em Inglês | MEDLINE | ID: mdl-36410876

RESUMO

Cancer therapies usually suffer from poor targeting ability and serious side effects. Photoactivatable cancer therapy has the significant advantage of a high spatiotemporal resolution, but most photoactivatable prodrugs require decoration with stoichiometric photocleavable groups, which are only responsive to ultraviolet irradiation and suffer from low reaction efficiency. To tackle these challenges, we herein propose a photoactivation strategy with biogenic riboflavin as the photosensitizer to promote the in situ transformation of noncytotoxic dihydroalkaloid prodrugs dihydrochelerythrine (DHCHE), dihydrosanguinarine (DHSAN), and dihydronitidine (DHNIT) into anticancer alkaloid drugs chelerythrine (CHE), sanguinarine (SAN), and nitidine (NIT), respectively, which can efficiently kill cancer cells and inhibit in vivo tumor growth. Meanwhile, the photoactivatable transformation can be in situ monitored by green-to-red fluorescence conversion, which will contribute to easy controlling of the therapeutic dose. The proposed photoactivatable transformation mechanism was also explored by density functional theory (DFT) calculations. We believe this riboflavin-promoted and imaging-guided photoactivation strategy is promising for precise cancer therapy.


Assuntos
Neoplasias , Pró-Fármacos , Pró-Fármacos/farmacologia , Neoplasias/tratamento farmacológico
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